TCONS_00056766 (transcript) - C. hemisphaerica

Overview
NameTCONS_00056766
Unique NameTCONS_00056766
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1906

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00056766 ID=TCONS_00056766|Name=TCONS_00056766|organism=Clytia hemisphaerica|type=transcript|length=1906bp
CTTACATGGCTTCTTAGTCTTAATGCTGGGAAAATGATGAAACTTTCAGG
GGTGGAGATCACTTCTTAAAGGAACGAGTAGaAATGAGCTagcaaaaaat
atgtttcaagGCCAAAGGAGTAATGGAAGAGGAAGGGACCAAACAAGGGG
TAGAGAGAGAAGTAGGGGAAAGGGCCGAGGTCATGTTGGTAGAGTTTCAA
GCAGGCAGCAAGGTTCAGATGTTGGTAGAGGATCAAACACTAAGGAGAGT
ATGAAGCCAGCTGCTCAAAGAAGAAACAGTAAACCCTCTGTGAAAAGCAG
ACAGAAGGAAAGCCATACCAAAGAAGATCATCAACAGAATCAAAGTTGTG
AGTCTAAACAATCAAACAAGTTTCggtcaagaaaacaaaaagagtCACAG
CCTGaTTGCATTTTGTCTAACAGTTTTGGATGTGAAAACATCAATTGGTC
AAGCAAAGAACtgatcaaattctgtgaaaagaATTTTGTTATGTTTATCA
TGCGTGGAGTTCCTGGTTCAGGAAAAAGTACATTGGCTCAAAAAGTGAAA
TCATTTTATGGTGGAAGAGATGCTATCATTTGCTCAGCCGATGATTATAG
GTACAATAGAAAAGGCGAATACATATTTAGTGTGGATCAACTTTACAAAA
CACATTTACAATGCCAAAACAAAGCTGAAACCTACTGTAGCAAACAGATT
CATGTGATCATTATAGaTAACACAAACATACATTCAAAGGACTGCAATCC
TTATTTAACCCTGGCAAAGAAATacaattattttgttattttcttaaaaa
tgaaagcTCAAGGTGTTGATCATCATGTTCAGTATAACACACATCAAGTT
CCACGTGACACTATTGCCAAAATGATACTAAGTTATGGATCTAATCCGTT
ACCCTACTATTTCAACTGGGCTGTTCCTAATTCTGAGGGAGTGCGCCTGA
GAAATGTTACACAAAGACTAATTCAGAGTTGTATGAAAGCAGATAGCCAT
TTTAGTAACTTTTTaacaaatgaaatgaaaacttCATCACAGAATCTTTT
CAAGACATTTCATTTACAAAATGCCTCAAGTCATCATTACCATGCTACAG
TTGCTTATACCAACCAGTATAATGTACCAACTAAAATCAGTGATAAATAT
ACAAAGTCTGCTACAGTGAAAAATGCTCTTGGTAGCGTCACCTTCCTTCA
AATAGCTGGTGTATACATCACACCAAAGTGTATAGCCGCTAGGTTGCTAT
TGACTGAAGAACAGAAGAAACTATGGGGTAGAAATGATTCTTTAAACCGT
GGTGAAATCAACCCTATCGCTTTTGAATCAAATAAAGTTATGGAGGGCTC
TTTAGAGAAAATGCTTTGTGACTTACATCTTAATAACAAACACATGAATG
AGGATACAGTAACTTTTCAAGTACCTCCTGGATGTACAGAACCTAGTCAT
AGTCTTGGTTGCACAGCTCACATTACTTTAGGGACGAGGGGTAACAACAA
ACCTGTGATTGCAAAAGATACCTTATACCAGATTGTTCATTTAGAAGCAT
ACACTCTaccaaaaagtgaaacattAACCTCAGGGAATCTTGTAATTCGT
TGCTATGGGGATGATAAATGGGTTATCTATTTTCGACATCCGTTTATAGC
GCAAGCATTGTTTTGTGGACACTatgatttgatgaaaaatacagggtgtc
ccaaaaagtagttttttttaggttttatccattcttttttactttttttg
tacaGAAAGTATGgttttaatatttatatttggaattatttttgtAGATA
GCTGAAATTGAACATTATTTGGTTTTATCTTTTaactaacttttttattc
atttgtttgTTAGTAAAGCCCTTAACATTTtaatattaataaaaacacta
aaGCAT
Run BLAST on NCBI

transcript from alignment at scaffold_282:96929..111056-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00056766 ID=TCONS_00056766|Name=TCONS_00056766|organism=Clytia hemisphaerica|type=transcript|length=14128bp|location=Sequence derived from alignment at scaffold_282:96929..111056- (Clytia hemisphaerica)
CTTACATGGCTTCTTAGTCTTAATGCTGGGAAAATGATGAAACTTTCAGG
GGTGGAGATCACTTCTTAAAGGAACGAGTAGGTAAGTGGTCGTTTGATTA
CTTAAATCATTATTAATTACTTTGCTAATCGAATATATTACCATCTATTT
TATAATATTATTTTCAAAGATGCATACTTATTGCTTGACGATATTAGCAT
GCTTCTCTTTGCTAATAAGTCTCTTGAATAGACCTTTTTTCAAAGAGGCC
ACCCTGTTGTTGAATAATCATGTAGTCCAGTAGAAAAACAATGATAAAAC
CATGCATAATTATTACAATATGCATGATACAGTAATTATGCATGGCTCTA
TCATTGTTTTTATGGCTGGACTATNATTACAATATGCATGATACAGTAAT
TATGCATGGCTCTATCATTGTTTTAATAAACCTTTTCGCCTTTCCTTTCC
GTTGGAAAGTATATGCATGATACAGTAATTATGCATGGCTCTATCATTGT
TTTAATAAACCTTTTCGCCTTTCCTTTCCGTTGGAAAGTATGCAAAACAT
ATGCAAGTTTACACAAAGATTAAAAAGACAACAAAGCATCTTATGAATAA
ATATTATAATCATTAGAGCAATAAATGATGGAATTTTTTAATCGAAAAAG
AAATATTTAGAGAATAACAAAAGCCTTTTAGAAATTTGTTCTTAAAGACA
TAGCATATTTTGTTTTTAGTCGCGCGGCTGAGGTCGAAAAAAGTGGCTAG
AAAATGATTTTCGTGATACACCTCTTAGATTCCACTTTTTTCGATGGAAA
CTCTCGAATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNTCATTTGGCGGCTCTATTCCCAGGAGAATAATTTACCGTCAGCCGA
ATAAGGATTATTTTTTACCTTCGCAGGTGATTTTTCAGTTTGAGTTTATG
TCTAAATGTTATGGTCTTTTGAAGTGCTTGTTCTAAGAGATGAGTGAATA
TAATTGTTTTTAGTTTCCAAGAGAAGCAAATTTAATCTTTCTTCTACAAG
CAGTTACATCAAAATGCCTCGAAAATGTCAATATGAAAATTGCGTAATCA
GAGAACGTATGTCTCGCTCATTATAAAAAGGCCGAGACAAACTTTCAATA
ATTGGATTGTAACATCGAGTTAAGTCTCTTTTCTTAAGTCACCAGGGGGT
GAATAAAACAGACCTTAATACATTTATCATTCGTTTCAACTTGACAATTT
GTTTTAAACTCAGCCTCCTAAATATTTGGGGTAGGTAAAATATGTACAAA
GAAATTCATACTTTTCCAACCCGGCCAATCTTTAAAAAAGAAGCGAACAA
TAAAATGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNAAATAGAACGCTAAAGTTTCAAAAAACGTAATAATGAACGTAGATA
AATTTCAGATATCCGTTTCCAGGATTACCGTAGGATCACATAAGATTCCG
ATTCCCACTCTAGCATTACTGGCGCTTTTCCGGGATCATTCCGCTAGTTT
TCCCGGGCATACCGGCAGAAAAAAGCGAATTAATCCAAGCTGGCAAATCA
TAAAACGCAAAAAAGAAGTAATGTTTTGATTATTTTTATAATCGGCCAAC
TTGTTTCATTGTTTTCAACTAATCGGAACTAACTATCATCTGTTTTCAAG
TGGCAAGTGGAATGTTATAGCAGGAATCGGAATCTTATGTGATCCTACGG
TAAGGTTCTCAAAATCAGAACTGATNACTATTTTGCAAGTATAAGCTTTA
AAACGACGCTTTTACAAAGAGGACGAGAGGATGTCAATGAGACTAATACA
GAAGAGTCGAGAGTATTGTTCTGTTCTACAGCTAAGCCTACAGCAGAATG
TCTCGATATGGGAAGAAACAAAACATAACAGTTGAAATAAAAAATCTGAA
TCAAAATATGGAAACAATGTTGTTAGTACCACTATTCAGCTGAACACATT
TATTCTAAATAGTTCAATAGAGGTATCTTTGAAATTAGCCTCGATCCCTT
TAAGAGGGCGCAATGACGGGCGTGTGGTGTGAGACAACAGCAGCAAAGCG
CCTGTGTTGGCTGTGCGATAAGTATTTGCAAAAAGCTGGTTGCCCTTCGC
AGGGGTCTGCTCACCGCCGCGTCAAAACGATTTGCAAAAGAACTCTACAT
GCAAAAACGGCAAAAACAGACCCTGTCAGACACACATCATGAAATTGCGC
CCCTGTCAGGTGCCCCCCCCCCGGAGGACGTCCTCTTTGAAAAAAGGTCT
ATTCTCAACAAGGCAATAAAAGTGTGTTTTCAGCAATGATGTATTTATGT
TATATATTCACAAGAGCAACTATGAAATCAAAAACTACCGTGAGAGCGGG
TAACCTGCATCAGTGGAGATTAACATACATAGCCCTCAAATGAATGACCT
GGCTGGTCATTAAAATAAACTATATTTAGCTCCGCTCACAGTTCTACTCT
ACCATTTTTGTTTTGATTTAACTTTGTATTTTAATGACCAGACAGGTCAT
TCATTTGAGGGCTATGCATGTTAGCCTCCACTGANATTCTCTTGCTTTGA
ACCTCACATCTCTCTTAGTAAGGAACAAGTGAGTTCCTTGAAAAAAGTGT
CTCGATTTTGATAAAAAACTGACAAAAATTGAACAGAAGATTACATAATG
AAACAATAGAAAAATAATGACAACGCACGCATTGAACATAAAATTAAGAT
GCGTAAAAAAATTAATTGAAAACAGAAGNTCTCTCCTAAGAAAGCCAAAA
TTCTCATGTTTTATAAAAAGTCCTTTAAAAAAAATCTAATTGGAAGCATC
ATGACAGACAGTCAGGCTAGCTCTAAAGCTCTAAAATAGCATCTACTAAC
ATGAAAACCACCAGACGTTACTAATCGATAAAATTGATTATCGATTAAAA
TTGATAGCTAATCCAGGCCATAGTTTAGAAAGGCAGGGCAGCGTCCGTTG
TTGGGCAGGGCACAGAGACTGACGCGTTTGTAACTTTTATGACATGTTCA
AACTGAATGAAGAAAAAAAATACAATGTTTTAGTCTCAAAGAAAATTANT
CCGTTGGTGGCCAAAAAGGGCATAAAAAATAGACTGTAATCGATAATTAA
TCGATTGATTTTAAAAATATCGATTAAAAACGATAATTGATAAATAATCG
GTGCCTAAAAGATTGTGAGTGTCGATTATATTGATCAGATATAAGATATC
GATTTCGAGTTTCATCGATATTATCGATCAAAAATCGATAGGGTCAAGGT
ATCGATTATATCGATATTAATCGGTATTATCAATTATTAACAATGTAATC
GATATTATCGATAAAAAATCTATGGTGATAATTTAATTGAGTGCTAAGAA
ATTGTGAGCATCGATTAGCTATTGATTATCGTTTTTAATCGATATTTAAT
CAATCGATTAATTATCGATTAGCTATCAATTTTAATTGATAATCAATTTT
ATCGATTAGTAACGTCTGGAAACCAAAATATGATTACGCACAGAGCGAGC
GTTAGCAAGCGGAGTGCGACTCTTTTGGCCAACGCATGCGCGTATGCAAA
ATTTACAAAATTTCAATGATATGCGGGTACTAAAAATGGAAATTCAGTTG
TTTTTTTCACGATTTTTTTCGTCTAGCCGCTATTCCGCTATGTTTAGCCT
CTGGAATGTTTTAGCTTTGAAAATTTCGTGAAAATTAGCGTTTTTAAGAA
GAAGTCGTTGCAGTGTCAATCTTTCGCAAATTTAAAAACCCACTTTCCCT
TGGAAAAAGTTGACGTTTTTTGTTTTTTTGGTACCCTTGGGGCATAAGGT
ACCTGTTGACCGCAAAAGTTTCAAAATTCGCGAATTGACCGTTGACAACA
TTAGGGGTAAAGGGACCCACTGACGTCACGGGTTTGGGAAAAATTTAAAA
TGCAATATCTCGAGTTTGAAGAAGAGTGGAGAGGTCGTTGACCCCTCATT
TTATCGGGAATTTTATGGGGAATGAAATGAGAGGGTTTATGAGACTTGAA
AAGGAATTTCAAATTTGGCTGAATTTTTAGCCATTTTCAGTTGATGACGT
CATCAAAATAGAAAACATGCGATATCTCGATTGTGAATAAGAGTTGAGAG
GTCGTTGACCCCTCATTAGATCGAGAACATTATGGGGAATGAGATGGAAA
GGTTTATAAGGCTTGAATAGGACTTTAAAATTTGACTGAATCTTTAGCCA
TTTTCAGTTGATGACGTCATCAAAACAAAAAAATGCGATAACTCGAGATT
GGAAAGGAATGGGGAGGTCGTTGACCCCTCATTCTATCGGGAATTTTATG
GGGAATAAGATGGAATTGGAAAGGAGTTTGGAAATGGCTAACCCCTCTTT
GGATCAGAAAATTTATTGAGAATGCAATGAGAGAGGGGTGTTATGAGGCC
TTAGGACGACTTTAAATAAAACTTGGTTAACATTTGGGTAAGCAGCATGA
GAAAATCAAAACAAAACAGCCGAAAAGAACTGAAATCTCGGAATAAATTA
TGGAAAAACGTTAAAAAAACTATTTTTTGATGAGCTCTTACTCCATTCTT
TCCAAAAAGTTAGTGAAATTAAAACTGATGAAATATATAGAAATTATTAC
AAAACTACTTGACACACACGTGACACGACCCAAAGCAAATAAATTCAGCT
TTCGGCACTTTCGTTTGTTTCGTGAAAACCAAACAGTTCTTTTTATCAAT
CAATGTATGCATAAAAACTTGAAATTCTTTAATACTTGTCAAGAATATTT
TCCAAAACAAAACGAGGGAAATTGTTTACTGTAATGTACCTTATTGGTAT
ATATTTTCGCGTGTTACAAATTTTCGCGGGTACTTAATTTCGCGAGTTTT
TTGGTCAATTTTCGCGAAATTTAATACTGTTTAAATTTTTCAAAATTACA
AAATCAGGAAATTAAATACAGGCAAAAAAATTTTTCTTAGTATTTTGTTA
GTATTTTTACATCAAAAACGTTGTGTTTCAAGCAAAATCAGTCTTTTTCT
TCCTTTTTTCCCACTTTCTGAAAATACCTAGTTTAGTGAATCGCGAAATT
TAATACACGCGAAAATTTTCCAGAAGTCGGCAATCGCGAAATTTAATACA
CGCGAAACACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNTAATGTATAATAATTTCACATCTCTGAAAAAGCTGCTGCATTTATTTT
GAAGCTTCTGGATCGACAAAATTTTTCTTCATTTTGATGTGCATAATTTC
GGCGGGAACTTCGGTCAAATGTTTTTGTTCGAATCTAAAATTCGAATCTA
ACAAGATTTTCGAACAAAAGCATTCGAAATTATAGAGACCCGGAAGTTAT
TTTTCATTTTTTAACTTTGGAATTGTTGCTTTCTTTAGTTTTCCGAGTTA
TTTTTTATTTTCTAACTCGGTAAATTGTGCTTCCTTTAACTATCCGATTT
ATTTTTCTTTTTTTAACTCGGGAATTTTTGCTTCCTTTAACTTTCTGTAA
ATAGATTAAATCTATTAAATTTTACGTTTAATAAAAAGGCTCGCCTCACT
CGTAAAATATTTCTCATTACTTATTGAGTCTTCATTGGTTTGGTAATCAT
CGATAGAATCTAACGGATCAATTAGAAATCGATTTCATTTCAGTAAAGTT
AAGAATTTATTTTTCGGTGACGACATTTAGGGCCAAAATGACGTCCTCAT
CACAAGATTCACAGTATTTTGAGTTTTGATCCGTTTTAAGTTGTAATTTT
TAGATTTATGGAATTTTGGATTTTCGGAATTTCTTTGGGGTTTGGGATTT
TTTCGGAAAAAGAGTACGATATTCTTTTGAGCAGCGGATTGATAGCCTTC
ACCTCTTTTTACATAACTAGTGTGGGCTTGAGCGTTGAGGCGTCTCTATA
GAATCCTTTCGCTTTGCGAACACAAGACTCGTTCTCCGTGCGTAACCCCT
TTTACGATTATCGATTATCGATTATCAATTAGCTATCAATTTTAATCGAT
AATCAATTTTATCGATTAGTAACGTCTGGAAACCAGGATATGATTTTTCA
ATGGGAATCAAAAAGTGCACTTACAAACATCAAGTTGTTAGATCTAACAA
AATTAATAACTGCACTGTCATCATTGACAAAAAACAAACAATTTTCTGTC
AAGAGCCTTTATTGCAACAACTTCCATAAAAATTATCTATCACAGCTAAG
TCTACCATTTTAGCGCGATCCGAGGATTGAGCCGGAAACGCTCGCAGAAC
GCTCGCAGAACGCCCGCAGAACGCCCGCGAGCTCCCATGCGGGTGAAAAA
CTTCAATCTGTCAATTATTTTCTCAAGCGAAGAGTACACGAAGCAATTCT
AGCAATTTTTGGACTCCGTACCCAATGCAACGTGCAAGTACTGTTAATAA
GAATGTTAATAAGTTCATTTGAGGTAAGTCAGCCAAAATTTGAGAAATGT
TTGGAAATGAAATGCACAATATTCACAAAATAATTTCAAGCAGTTTGACT
AAATATAGAAAATGAAAAATAGGGGTGTCTTTTAAAACACACTCAATTTC
CTAATTTATTGGATATAAATAAATTAGCCGATATAAATTAACCGATGTCC
GTCCGTTCTTCCGTCCGTCCGTCTGTTACCAGCTTTTCTCAGGATTGGCT
CATTAGTTTTTTCTGATTTTTTGCTCAAAGATGCGTATTAACAATGTCCA
AAACATGGCCGGGTCCAATTTTTGAGAAGCCGGAACTATTTAAAAATCAC
CGGAACAACCTATTTTCACCGGAAAGATAGTATTTCTTGAATTTCTCTAG
CTGTACTTTATATTTTTTATGAGATTTTGCACACTGATGCAAAATGACAA
TACCCAAAATGTGACGGAGCCCGATTTTCAAAAAATATGCTGGAAAAACC
GTTTTTTTGGCATTTTCTTGAGATTTTATCCTTAGTTTTTTCTGATTTTT
TTCAAAGCTCAAAACATGACCGAGTTCAATTTTTGAGAAAATTTTTTTTC
TGACCAAAAATGCCGGAAATCTCTGTTTTTGCAGATTTTCATTGAATTTT
TTCGATTTATATCTTTGTTTTTTTCAAAAACATTATTTATAAGAATGTCC
ACAATTAAGCATGGTTCAATTTTCAATGAAACTGATTTTGGTACAGGTAC
TTTCTAAAAATTGCCGGGTTTCTTGAATTTCTTGAGTTTGTATTATTCTG
CATTTTAATACTATTGTTGTCATTTTTCAATTGTCTTATTACATTAATCT
TCAGGTAGGTCCATTCAGCATGTAGATTGTTTTATCTTATGACATTCAAT
TTTGTTTTAAAGAATAATCTCAAAGACAATAGGTTAATATTAGCATGTGT
GGTTTTTATTTGTTCCCGTTTTTTTTTTTTTTAACTCAAGAAATGAGCTA
GCAAAAAATATGTTTCAAGGCCAAAGGAGTAATGGAAGAGGAAGGGACCA
AACAAGGGGTAGAGAGAGAAGTAGGGGAAAGGGCCGAGGTCATGTTGGTA
GAGTTTCAAGCAGGCAGCAAGGTTCAGATGTTGGTAGAGGATCAAACACT
AAGGAGAGTATGAAGCCAGCTGCTCAAAGAAGAAACAGTAAACCCTCTGT
GAAAAGCAGACAGAAGGAAAGCCATACCAAAGAAGATCATCAACAGAATC
AAAGTTGTGAGTCTAAACAATCAAACAAGTTTCGGTCAAGAAAACAAAAA
GAGTCACAGCCTGGTAAGGCCTGTAAATTCGTATAATTTAACATAATAAG
GACGCCTTTGTTTTTTTAATGGTCCTGTCATAATAGTTGCATTTCCAAGA
TATTTTTATTTTATACAATAATATAATTTCCTTGATTACATTGTATTGCC
TAGAGATTGAGTAAGTTTGGAAAAAGTGTCATAATTATAAATTAAATCTC
AATCTTTCAATTTTCTTTTAGAAAAGACTACTGGGTCAATTGCTATGAAA
AAAGATTATCATAAATCTGGATCAGTTGCTGGCCAGTCTTCAGGAAAAGC
AGGTTATTTATGTTTAAAATCAAATCCAAAAAAAGAGATTCTGACTTGTC
ATATATTTCCTTAAAATGAGAAATTGTTTTTGTAAATGCCTTCAAAATTT
TCTTCTTTCTAGATTGCATTTTGTCTAACAGTTTTGGATGTGAAAACATC
AATTGGTCAAGCAAAGAACTGATCAAATTCTGTGAAAAGAATTTTGTTAT
GTTTATCATGCGTGGAGTTCCTGGTTCAGGAAAAAGTACATTGGCTCAAA
AAGTGAAATCATTTTATGGTGGAAGAGATGCTATCATTTGCTCAGCCGAT
GATTATAGGTAAGACACCGTAAGGTTGTATGGGATCAGGTGACTTCAATG
CCTACTTTAATCTGCAATTATAGCATTTTTATTTCCCATTGAGCATTTGA
GTTAATTTAGAATGAAAGTAGAGAATTTATAAAACTCAGTATCAAACTAC
AAAACTAAAAATTTGTAAGATGTGGGAAAATATTTTTGAAAATAAAATTG
AAATTAAATAATTTAGTCTTAGAACACGATTGCCGTTGAAAAAAGAAATG
TTTTATACCAAAGTCAAGGTTATATCCAGTCTTTTGGAAACGTTTTAGGC
GCTGTTCACTGTTTCTTGTTGATGTGTCACTGCACAATGTTGAACTTATT
TTTATATTAAGGAGTTGAGAATATAGGTTTCGCACTTTCCTTTTACAGGT
ACAATAGAAAAGGCGAATACATATTTAGTGTGGATCAACTTTACAAAACA
CATTTACAATGCCAAAACAAAGCTGAAACCTACTGTAGCAAACAGATTCA
TGTGATCATTATAGGTAAGTTATTAATAGTGGCTGCAAAGTTTGGTACTA
TATATTGACGATGTGACTTGTTGATATACTTGATCTTTTCAGTTACCGAT
ATTTTGAAAAGCAATAGCAAGTGTAAGTAACTGAAAATTAGTTGTCTTTG
CTTTTTCACTTGTTACTCTTTATTAATTTATGATTATATACCTTATTGGA
ACTAATTTTCGCGGGAACTAATTTTTGCGGTCAAAAAAAAATATCCGGAA
AATTGCATTTCGCGGGTTTTAATTTTCGTGGTTTTTTCCATTCTGGAATT
TTCGCGGGTTTTAGTTTTCGCGGTTTTGCCCTTTTTTGGACAAATTTCTT
TCATTTTCCTAGGGATTTTTCAAATTTTTCGATAAAATTGGAAAAAATTG
TTATTCGCGGGAATTAATTTTCGCGGGTTTTAGTTTTCGCGGTTTTGCCC
TTTTTTGGACAAATTTCTTTCATTTTCCTAGGGATTTTTCAAATTTTTCG
ATAAAATTGGAAAAAATTGTTATTCGCGGGAATTAATTTTCGCGGTTTTC
AGCTCTCAAAATTTTTCGCTAAAATTAAAACCCGCGAAAATTAGTTCCAA
TAAGGTATCAAAATGCGTCTCTCATTCTTCTTTTTCAGATAACACAAACA
TACATTCAAAGGACTGCAATCCTTATTTAACCCTGGCAAAGAAATACAAT
TATTTTGTTATTTTCTTAAAAATGAAAGCTCAAGGTGTTGATCATCATGT
TCAGTATAACACACATCAAGTTCCACGTGACACTATTGCCAAAATGATAC
TAAGTTATGGATCTAATCCGTTACCCTACTATTTCAACTGGGCTGTTCCT
AATTCTGAGGGAGTGCGCCTGAGAAATGTTACACAAAGACTAATTCAGAG
TTGTATGAAAGCAGATAGCCATTTTAGTAACTTTTTAACAAATGAAATGA
AAACTTCATCACAGAATCTTTTCAAGACATTTCATTTACAAAATGCCTCA
AGTCATCATTACCATGCTACAGTTGCTTATACCAACCAGTATAATGTACC
AACTAAAATCAGTGATAAATATACAAAGTCTGCTACAGTGAAAAATGCTC
TTGGTAGCGTCACCTTCCTTCAAATAGCTGGTGTATACATCACACCAAAG
TGTATAGCCGCTAGGTTGCTATTGACTGAAGAACAGAAGAAACTATGGGG
TAGAAATGATTCTTTAAACCGTGGTGAAATCAACCCTATCGCTTTTGAAT
CAAATAAAGTTATGGAGGGCTCTTTAGAGAAAATGCTTTGTGACTTACAT
CTTAATAACAAACACATGAATGAGGATACAGTAACTTTTCAAGTACCTCC
TGGATGTACAGAACCTAGTCATAGTCTTGGTTGCACAGCTCACATTACTT
TAGGGACGAGGGGTAACAACAAACCTGTGATTGCAAAAGATACCTTATAC
CAGATTGTTCATTTAGAAGCATACACTCTACCAAAAAGTGAAACATTAAC
CTCAGGGAATCTTGTAATTCGTTGCTATGGGGATGATAAATGGGTTATCT
ATTTTCGACATCCGTTTATAGCGCAAGCATTGTTTTGTGGACACTATGAT
TTGATGAAAAATACAGGGTGTCCCAAAAAGTAGTTTTTTTTAGGTTTTAT
CCATTCTTTTTTACTTTTTTTGTACAGAAAGTATGGTTTTAATATTTATA
TTTGGAATTATTTTTGTAGATAGCTGAAATTGAACATTATTTGGTTTTAT
CTTTTAACTAACTTTTTTATTCATTTGTTTGTTAGTAAAGCCCTTAACAT
TTTAATATTAATAAAAACACTAAAGCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035756XLOC_035756Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056766-exon-scaffold_282-1575043694:110976..111056TCONS_00056766-exon-scaffold_282-1575043694:110976..111056Clytia hemisphaericaexon
TCONS_00056766-exon-scaffold_282-1575043694:99844..100166TCONS_00056766-exon-scaffold_282-1575043694:99844..100166Clytia hemisphaericaexon
TCONS_00056766-exon-scaffold_282-1575043694:99249..99444TCONS_00056766-exon-scaffold_282-1575043694:99249..99444Clytia hemisphaericaexon
TCONS_00056766-exon-scaffold_282-1575043694:98743..98858TCONS_00056766-exon-scaffold_282-1575043694:98743..98858Clytia hemisphaericaexon
TCONS_00056766-exon-scaffold_282-1575043694:96929..98118TCONS_00056766-exon-scaffold_282-1575043694:96929..98118Clytia hemisphaericaexon
TCONS_00056766-exon-scaffold_282-1510915933:110976..111056TCONS_00056766-exon-scaffold_282-1510915933:110976..111056Clytia hemisphaericaexon
TCONS_00056766-exon-scaffold_282-1510915933:99844..100166TCONS_00056766-exon-scaffold_282-1510915933:99844..100166Clytia hemisphaericaexon
TCONS_00056766-exon-scaffold_282-1510915933:99249..99444TCONS_00056766-exon-scaffold_282-1510915933:99249..99444Clytia hemisphaericaexon
TCONS_00056766-exon-scaffold_282-1510915933:98743..98858TCONS_00056766-exon-scaffold_282-1510915933:98743..98858Clytia hemisphaericaexon
TCONS_00056766-exon-scaffold_282-1510915933:96929..98118TCONS_00056766-exon-scaffold_282-1510915933:96929..98118Clytia hemisphaericaexon
TCONS_00056766-exon-scaffold_282-1491911889:110976..111056TCONS_00056766-exon-scaffold_282-1491911889:110976..111056Clytia hemisphaericaexon
TCONS_00056766-exon-scaffold_282-1491911889:99844..100166TCONS_00056766-exon-scaffold_282-1491911889:99844..100166Clytia hemisphaericaexon
TCONS_00056766-exon-scaffold_282-1491911889:99249..99444TCONS_00056766-exon-scaffold_282-1491911889:99249..99444Clytia hemisphaericaexon
TCONS_00056766-exon-scaffold_282-1491911889:98743..98858TCONS_00056766-exon-scaffold_282-1491911889:98743..98858Clytia hemisphaericaexon
TCONS_00056766-exon-scaffold_282-1491911889:96929..98118TCONS_00056766-exon-scaffold_282-1491911889:96929..98118Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_282supercontigscaffold_282:96929..111056 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.02009	1.97723	5.10359	3.91807	6.94084	4.42586	3.98375	2.71973	1.58555	1.2091	0.0788109	0.626203	2.13161	1.16912	1.66893	3.33436	2.62943	2.04556	1.5375	1.26086	3.79997	1.54722	1.50993	0.00014495	2.09952	2.36348	1.00625	0.370146	0.831281	1.21344
Blast
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BLAST of TCONS_00056766 vs. Swiss-Prot (Human)
Match: CN37 (2',3'-cyclic-nucleotide 3'-phosphodiesterase OS=Homo sapiens GN=CNP PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 3.455e-19
Identity = 96/408 (23.53%), Postives = 163/408 (39.95%), Query Frame = 2 
Query:  491 MFIMRGVPGSGKSTLAQKVKSFYGGRDAI-ICSADDYRYNRKGEYIFSVDQLYKTHLQCQNKAETYCSKQ-IHVIIIDNTNIHSKDCNPYLTLAKKYNYFVIFLKMK-AQGVD--HHVQYNTHQVPRDTIAKMILSYGSNPLPYYFNWAVPNSEGVRLRNVTQRLIQSCM--KA-DSHFSNFLTNEMKTSSQNLFKTFHLQNASSHHYHATVAYTNQYNVPTKISDKYTKSATVKNALGSVTFLQIAGVYITPKCIAARLLLTEEQKKLWGRN-DSLNRGEINPIAFESNKVMEGSLEKMLCDLHLNNKHMNEDTVTFQVPPGCTEPSHSL--GCTAHITLGTRGNNKPVIAKDTLYQIVHLEAYTLPKSET--LTSGNLVIRCYGDDKWVIYFRHPFIAQALFCGHY 1675
            +FI+RG+PGSGKSTLA+ +   Y  RD   + SAD Y+        FS +  YK   +       YC ++ I ++++D+TN   +       +A +Y Y V+ ++ K A  +D     + N  Q+  D + K+      + LP YF W +       LR   Q  ++     KA       F+  +      +L   F  +       H T  + +    P   +++Y +   +K +      L I+ +++TPK   AR+ L+E+Q +LW  + D L+                                                P+ +L  G  AHITLG   + + V     L +I+  E       E   L+ G L     G+ +W++        +A+F G+Y
Sbjct:   52 LFILRGLPGSGKSTLARVIVDKY--RDGTKMVSADAYKITPGARGAFSEE--YK---RLDEDLAAYCRRRDIRILVLDDTNHERERLEQLFEMADQYQYQVVLVEPKTAWRLDCAQLKEKNQWQLSADDLKKLKPGLEKDFLPLYFGWFLTKKSSETLRKAGQVFLEELGNHKAFKKELRQFVPGDEPREKMDLVTYFGKRPPGV--LHCTTKFCDYGKAPG--AEEYAQQDVLKKSYSKAFTLTISALFVTPKTTGARVELSEQQLQLWPSDVDKLS------------------------------------------------PTDNLPRGSRAHITLGCAADVEAVQTGLDLLEILRQEKGGSRGEEVGELSRGKLY--SLGNGRWMLTLAKNMEVRAIFTGYY 398
The following BLAST results are available for this feature:
BLAST of TCONS_00056766 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CN373.455e-1923.532',3'-cyclic-nucleotide 3'-phosphodiesterase OS=Ho... [more]
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