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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056820 ID=TCONS_00056820|Name=TCONS_00056820|organism=Clytia hemisphaerica|type=transcript|length=1245bp
taataaataatttaatATATATAACATGTCTGAAGTTAGAAGAGCATCGC
ATGCAGGATCGTGGTATTCATCCTCAAAGAAAGAACTGAATTCGCAATTA
GAGAATTGGCTTTCTAAAGCATCGTCAAAGAAAGTTGGAACCAGGGCACT
TATTGCACCTCATGCAGGTTATAGTTATTGTGGCGCATGTGCAGCTTTCG
CATACAACAGGGTTGATCCAACCAACATAAAGAGAGTGTTTATCCTTGGT
CCATCTCACCATGTTTCATTGGGTGGATGTGCATTAACACAAACCAAGAC
TTACTCCACACCGCTCTATGATCTAATAGTTGATCAAGAAATGAATGAAG
AATTACACAAGACAGGGAAATTTGACAAGATGAGTATTTCGACGGATGAG
GATGAACACAGCATTGAAATGCATTTACCATATATTGCCAAAGTCATGGA
AAGtaAGAAAGGCCAGTTCACTGTTGTACCGGTTTTAGTTGGACACACTT
CCCACGATAAAGAATTGATGTACGGCAAAATTTTTAGCAAATATTTGAAA
GACCCGGAAAACCTTTTCGTAATTTCCAGTGATTTTTGTCACTGGGGAAG
CCGCTTCAGATATACGTATTACGATAAAAGCAAAGGAGATATACACCAAT
CTATTGAAGACCTGGATAAGCAGgGTATGAAGATTATCGAGCGACTACAT
ACATCAGAGTATTATCAATATCTTGAAAGGTATTCAAACACGATATGTGG
AAGAAAACCTATCGGAATTTTCTTGAATgccgTGGACCAGTTAAAAACAG
ATGGTACAATATTCGAGTTCCACCAATACGCACAAAGTAGTAAAGTCAAA
CGGATGAATGATAGTTCGGTTAGTTATGCGGCTGGTACCCTGGTCTCGTT
GTAACACTCTCTTGGGACACAGTTTCATTGCTCGAAAACTGTATTGCTTA
CCAGATATTATGTTTACTTTGCTTGAGACAGTACCTGACTGGatgatttc
aattttcatattgcCTGAACAATTCGTCATCTACAAAAAGAAGGAATTGc
aagttgaaatttttatgtTGTTAATGTTATCATCAATCGACTACTGCTTA
CCGACATCTAGAGACTTAGACTATCTTACGCGTTCTCTGTTCTTGAGGAT
ATGGATTTCCTATCAACATttcattaaaggttttatttttaaaaaagtgt
tcccgtttcatatcagacacattttatatcaggacagtcTCTGCA Run BLAST on NCBI protein sequence of TCONS_00056820-protein >TCONS_00056820-protein ID=TCONS_00056820-protein|Name=TCONS_00056820-protein|organism=Clytia hemisphaerica|type=polypeptide|length=292bp
MSEVRRASHAGSWYSSSKKELNSQLENWLSKASSKKVGTRALIAPHAGYS
YCGACAAFAYNRVDPTNIKRVFILGPSHHVSLGGCALTQTKTYSTPLYDL
IVDQEMNEELHKTGKFDKMSISTDEDEHSIEMHLPYIAKVMESKKGQFTV
VPVLVGHTSHDKELMYGKIFSKYLKDPENLFVISSDFCHWGSRFRYTYYD
KSKGDIHQSIEDLDKQGMKIIERLHTSEYYQYLERYSNTICGRKPIGIFL
NAVDQLKTDGTIFEFHQYAQSSKVKRMNDSSVSYAAGTLVSL Run BLAST on NCBI transcript from alignment at scaffold_283:39804..50329+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056820 ID=TCONS_00056820|Name=TCONS_00056820|organism=Clytia hemisphaerica|type=transcript|length=10526bp|location=Sequence derived from alignment at scaffold_283:39804..50329+ (Clytia hemisphaerica)
taataaataatttaatATATATAACATGTCTGAAGTTAGAAGAGCATCGC
ATGCAGGATCGTGGTATTCATCCTCAAGTAAGTTCTTCTCCAGTAAATGA
TTTCATAATTTTCTGTAGATCTATTTGAAAGAGTAGTAAATCTCTTCATC
TTTTTTGAAAGACTATTTTAAGGTTATTTCTCACATTGTATCTTCTCATT
TCTTTCTATATGGCTGGAAATGTTGTTAGCATTATAGTTTTTGTGCTTAC
TaccaattattttaaaattNGCTGGAAATGTTCTTAGCATTATAGTTTTT
GTGCTTACTaccaattattttaaaattgttctcaaATCCTAGCGGTCCAG
GGGAGTCAAACAAAAGTTCTGTTTAGTCTGAcgtattaaaatttgaaata
ttggCAAAATTTTCCTGTGTGAACAAATATATTTCCAGtgtaacttttat
tttatgcCGGAGAAATTGGATGAGGATCATGTTAATAGTGGGAGATTCTT
GAAGAAACTTTTCATGCCAGAGAAAGTGTTGATATGCAGGATACAGTTTT
GTGTCTCATCatttaatgttttgtttatttcaattattattattattttt
tttaatgcaaACCATGCTTACTTTCTATAGAGAAAGAACTGAATTCGCAA
TTAGAGAATTGGCTTTCTAAAGCATCGTCAAAGAAAGTTGGAACCAGGGC
ACTTATTGCACCGTaagaattttattgatttttttttaaatcttataaTT
GAAATGCCAAATCAGAAAACAACAACCTTTAGGTTAAATTATGTTAATAA
TCTCAAACACCAAGAGGAAAAAGAAATAATCAAGAATGCACACTAAGTAA
AATTACTTAAAATCCTGTATCAATTATATGGTAATTTTCTTCTTagttaa
taaaaaaaatgatttaaataaaatttaggCCATTCATTTTCTATCCTTAG
TCATGCAGGTTATAGTTATTGTGGCGCATGTGCAGCTTTCGCATACAACA
GGGTTGATCCAACCAACATGTAAGTATGTTGAAGATTTTGTTTCTGAGAA
AAATTCTTAAACATTATTTCTCAAACATGAAAGGTCATCTGTTCTTTTTT
CCCTTTTAAAAAATGCAAGGGAATCCTCTTACATTTTCAGGAAATTTTCT
ACCCATGTTGAATAACAATGTTCAGTTCATTTCCTTGTTTAATTTATCTG
TTTTAGGGGCTGTTCATATGGAGACAGGCTGGCTCGGCTAGGTGAGGTGG
GATAGATCTTCAAATGTCACGTGATGTACTTTTAGCCATTTGATTCGTCA
AAAACTGTGAGGTGACAATAAAAAATTTATCCCACCTCATTTAGCCGGGC
CAGCCTGCCTCCATAGGAACAGCCCCTTAAAAAGCAGTATAAATGCTTGA
GGGATTCTCACTTATCTATTGATGCAAGTAGTATGTTGATCATCAAATCA
CTTTTTTCTTAGAAAGAGAGTGTTTATCCTTGGTCCATCTCACCATGTTT
CATTGGGTGGATGTGCATTAACACAAACCAAGACTTACTCCACACCGCTC
TATGATCTAATAGTTGATCAAGAAAGTATGATTTCTTATAAGATTACTTC
TCTGTactaaactttttgacgtttttgtaaggccATTGGTCAGTTGAAAA
ACGAAGCAATTCCATtagtcggttgaaaaatgaagcaatttcattgttcg
aaattgacgtaacggatgaaaaaagtagaacttccttcaacttttttatg
TTCGCACGaatcttttctttaaaaaaaaggttgagtgaaaaactgtcgcc
catttagCGCAAAAGTGGATACCAGCCTTTATACTCCTATCAACTCTAAA
CAGTGTGATCAGTTTTTGAAGACGCTGATACAACAAAAATGCAAGGAAAC
TTCTTTTTGACAACGGTATTGAAAACAAGTGTAGGCGCCCTCTTGTGAAA
AATGTAAGATTCCCTTGCATTGAAATGATAAACTGACGTCAATTTAATAG
ACCTTAGAATGCTAAAAATAGTTTACACTCCACCAGAAAAGTGCCTCTCA
TATGGCACAGTAGTCCATACTAGATGTCACTCACGTTTTTCTACActatt
gggctgttccattaaaaattgacgaacctttttaaggcaaaaaaaaattt
ttaaaaatgtagtgataccctggaaaatggcaaaatttgcaaaagaagtc
ttggaaaattttttttcatactttAAAAGTAAGAGTGGACGAACAGAAAT
GAATctattaccccctggaaattttagaatagcTTTTACCTACTGGTAct
ggaaaaatgaagaaaaaaaagccTGGAAATTATTCTCCGATTATCCCCTG
TAAATGTTCGTCCAACctcctgtatggatataaaatgtaaTGGCCCATTA
ACGTCTATTCAACTTTGtgactttttcaaatgtttggaCCCCGGGTTTTT
TCGGGCTTTAAGCATTAGatattttgacgtcacttttagcTTCCGAAACa
cctgcagtagcaaaaaaattgaggtttttagcccaattattttccaaagc
tgagatatttgactttgaattttcaaatttttacttgaaaatgatagaaa
ttcaacgtaaagaatcatttttagaattctatTTCTTAATGAGGGCAAGT
TAGGGCCTTGTACAGACCATTGAATTATAGATGTTATAAGATTCCTTAAA
AATGTTAGGTATTTCCATGATATCTCAAAAAAAAAGGTGTTTTTCAGTAA
TCATGAATTTTATCAGGCTAAATGAGGTTATTtctattgatttcaaagcc
ctgAAGGGGCTAGATCTGAAtgtcctggatgggaaatgaagctactTATA
TCCCTTTCTCGTGACCCGTGTGTTTTTCAAACTAAATTTGTAAATGCAGG
GCAAACTTAAGGCCTCACTTTTGCTTGCCTgggaaagattgaagatttcA
CTCTTTAGCCGCTTCGGGGCTTCAAACTAAATGATTCTTCTTCTTTCCTC
TCCTCGCCAGTGAATGAAGAATTACACAAGACAGGGAAATTTGACAAGAT
GAGTATTTCGACGGATGAGGATGAACACAGCATTGAAATGCATTTACCAT
ATATTGCCAAAGTCATGGAAAGGTATTGATTTTCCAGCATGGAACCTACA
CCGGGGATCATTTTCTTTCGTCAATATGTCAAACAGCTTTTTATTCCTTA
GGGTTCTAAACCTTAGGATCTCTGACATCTTTTATATAAACCCCTACTGA
TCAGACTCAATAGGAAAAGTgggaaatataaattttttgaaagcttcACA
AGCTGAGGCTCGAATCTGAGAATCCTGATAAGCGCTATTCTGGCTAAAAG
GTGTCATGGATGTTGTTTACTATAAACTGCTTGACCCTTTAAGTCTTTGA
GGGTaactttagaacgccatggctTGACCCCTTCCCACATGTGTTTACCC
TTTCGATTTGTATTTAGATACACATAGAATGGGCATATCCCAACCAATCA
AAAAAGTCAAAGCATACCATAccatgggcttttccagaaaagaacTGAAT
ATAgggatggaggatataacatttcttGAAAATCGCCCCTGACACTGTGA
CGTTTGATctccggacagcaggtctaacccctcCGAACAAGCaacagttg
accccctggacattcaaaactaccctcaaacagagcaaatttacccccaa
acagagcaaatttacccccaaacagagcaaatttacccccaaacagagca
aatttacccccaaacagagcaaatttccccccccccccccagacaaGGCG
AATTTTGTACGCTTTTCACTatcccccggacactatatcctccaccccat
gtacagacattttctggaagagccttaTAAGGCTTCAAATccttttaatt
taaatttatctGACACTGGGCTCAATCTTGCTTATCCttgaattcatttt
ttcttgttaattttttttataagaacataagctatgaaggccaaaaaaaa
ttaaaaatttgaaaacgttTTTGACTATAAGACCCGAAACTTTAAGAAGA
CtcgaaaattctaaaaaaagagTTACTTTCTTTAAAATAATGTGTATAGA
CTTAACTATAAGTTTAATAGTTTCTCGAattattctttcattttttagta
AGAAAGGCCAGTTCACTGTTGTACCGGTTTTAGTTGGACACACTTCCCAC
GATAAAGAATTGATGTACGGCAAAATTTTTAGCAAATATTTGAAAGACCC
GGAAAACCTTTTCGTAATTTCCAGTGATTTTTGTCACTGGGGAAGCCGCT
TCAGATATACGTATTACGATAAAAGCAAAGGAGATATACACCAATCTATT
GAAGACCTGGATAAGCAGGTATTGTTCATGATAATTTAAACGCACATGAG
ACAATTTCTAAACGGCTGAATATAGCATCTATAAAAAAGCCAATAGTACA
TTTTATACTTAATAGCTGCAGTTAAGCTAGAATCCGAGAACGTCTGTCTG
TATGTGCGTCTGTCTGTCTATCTTCCGTGTTTGAGTCCAATATACTTTAT
TTAGATTATTGACTATTTGCATAGagctctttttggacctaccccggtgg
ggtagaggtccgcaaaatgtcaatacctaaattgtgacgaagcccgattt
tcgaaaagaatttatttccggccgaaaatgccggaaatatgccggaaaaa
ctgtttttttggcattttctcgagattttatcattagtttttaatgattt
tttgctcaaagatgtgtattaacaatgcccaaaacatgaccgagtccgat
ttttgagaaaattttttttccgaaaatgccggaaatatgcttgaaaaacc
ggttttttgactttttctcgaattttcatttttagttttttctgattttt
tgcagaaagatgcgtattcgcaatcaACTGGAACAAATATATCCATCAAT
AATCAATCGCGAACCAGAactttcaataaatcaaaatcatcataaCTATT
TAGATACCATTCTCATCAATATAAACCAAAACATATCTCGCCATGTAATC
AACATATCAAAATACCAATATCGAATAACATTTAACAACATCCTCTCATG
GAGGACGTAGCCTTCCAGAAACAAGAACTTGATTTAATTTGCTGAAAGAC
GCTCCCCGTTTCGTAAGGGAGTCAGCTAATTGCTTCGAAGCTTCGATCCA
CTTGATTGACATTTTATTATCGTGTATCATTTCATAAATGACACCCATTT
CAATGCGTAGCCTTTCTCCGATACCATAGTTGTTGAGTGAACATTTTGTA
CCAGAGATTTGTTGTCAACAAATGACATTATGGGGATTCGATTCTGGTGA
TCAGATTTTCCGTAAATCAATTCTGTTAGAAGACATCCGATAACGAAAAC
ACCTTCACAACCATCAGCAAGTGACAATGTTTCTGCAGCAAGGACGGCCA
GGAAATGGGACAGCGCTTATCTCCTTTGCCGAAGGGAAAAACAACTCGAC
CACCAGTACTGGAAGTTCCGTCAGGAAGATTGGCGAACGATGCATCATTG
AATAACATTAGCTTAAGATTACTCAGTTCTCCAAGACGTGGGAACTTGAT
TTGTAACGCTTCAGATTTCAACTTTCTGATGACTTTATTCGCTTGCAGTA
AATGATCTACTGTGGCTCGATTGGTTATCATACTCAGTTCAAGAACGCCA
TATGAAAGATCTGGTCGTGTCTGTGTTGCGACCCAATTCAATTGACCGAT
TGCTGTTCTCAAAAGTTTTTCCTCTTTGGATGTCACTTTATCGTTCTTTC
GTAACTTTCTCGACGGCGTGATTGGAATCTCCTTGATTGACTTTACGTAG
ATCAATTGTAATAAAGTTGTTTGATTTTGGTTGGTCGAAACTTCCAATCC
GATGTATTTGAAAATATCAGTTTCCTTAGAACCAACTTTGTAAACTTCAC
ACACCTTTTTCACAACAGTCTTTAAGAAGGTCTGTGAACCAGcatacaaa
aagtcatcaacaTGTAGGATAAACATTCCTGCAAGCTGGTTAGATGAATC
ACGCCACATGAACAGTGCTTTGTCGATGGTTGATTGTACGCATCCAAGTT
TTAGTAGTGTTTCTCGAATCGTAAAATACCAATTACGGGATGCCTCGTTG
AGCCCATACACTACTTTTCGTAGCTTCCAAACTAGGTTCTCGGCTACTTT
TGCTTCAGTGGACGGTTTGACATAGATTTCACGATGAATGTCTTCTCCTT
GTTAAAACGCTGACTTAAATCAATCATTTCGATAGGCCATTGCTTTGTAG
AGGCAATAGCAAAACGAAGAGAGTCCTTGGATATTGTGGGAGAGTCACTT
GGTATATCTGATGTCTCTTCAAATCCTCTCACTACAAGTCGAGCTTTAAC
TGTAAGGTTAGGTTTGGGTTGTTTCTCAGTCACTACCCATCTTGTTGAAA
TCAAGGGTTGGTTTTCGGATTCAACCGGTTCATATACGTCAAATGACTTC
CAATTGAGAAGCTCTTTTTCTTTAGCTTCTTTGACAAGTTCTCTTTCTTG
GTCATTTGTGGGACGAAATATAGCATTGAAATTGACACTTTCACTGGTAT
TTTCCCATTCAATTGCTGAAAAGTCAAGACATAAATGTTCACCATTTTCT
ACATTTTCGACATTGAACCACGATGCAAACTTTCCTGTCGCTTTACCTCC
TCTGCTGATGATACGGGCAGTTTCCCATTCAGAGTTATTTTGTTTAATAC
GCACAATGTCATGTAGTCTAGGAAAAAGTTGTCTTTCTGATACAGCTGCA
GGCATTGGTGGTGGTACTACAGGTGTTTGATCCGAGGTCGGTGGTGTAGG
AGCATCATCTTCATAATGAATTGTCACTGGGCTGTCAATCGGTTCTGTAG
ATCCGGTATCGATGATTTCCGATTTGTCACATGCTGTTGGGACTGTAACT
TTGGAGTTAATACGTTTGGTTGGATTACTGTTTGGATTTGGGTTGAATTC
TTCTCCGACTTTGAGGATTCGACAACTGGGAACTCTTNGTTGGGTTGAAT
TTTTCTCCGACTTTGAGGATTCGACAACTGGGAACTCTTACATAAACACT
TCCATGGCGGACAAAGATATCTTTCCGTCCTCACCAATAACTTTTCCAGG
ACCTTTCCATTTGTTGCTAGACTCTCGTTTGTAGTATACAGCATCACCGG
ATTCGAAAATTTCGCAATGCACGCCTGATTCGCTCTGATGATTCAGCTTG
TATAAATGCACGTCTCCCTGAGTGTAGACTGTTAAGATGTTGATAGAAAC
GTTCAGATGTTGTTGTACCCTCTAAAGCTGGTGGCTTATCGACGATCACG
GATAGAAGATTAGGATTTTGTCCAAACAAAAGCTGATAGGAACTGTAGCC
GGAGTTCATTTGTAAACAGTTTTTTGCATGAATTGCCCATACTAGGGCAA
CATCGGGTTtcatttttgggttttcttcCAGGACTTTTTGCAAACATTCA
TCAACAACGGCATGGTTACGTTCACATAATCCATTTTGCCATGGACTTTC
TGCTGCAGTGTTTCTgattttgatatgaaattaaacGAAGAATGTATTTA
CCGTCTTCCCACTTCTTGAGATCCATCACTACGACTTCATTGAAGGTGGT
GGCTAATGGTAAACTGACAACTGGCCTTGCaggagtttttttaaatttac
gaCAAATTTGACAATCAGCTGAAATAGCATCAATCACTTTGGAGCAAACT
GGCGACAGAACTCCTGCATCTCGTAATAAACCTTTTAAGCGTTTCGGGGA
CGGATGAGCAAACTGCTTATGAAGTTTTGTGACAACTGCGGAAATTTCCT
GATCACTTTCGACACCGGTAAAGCAACATTCTATGTCAATAGATGTGTCT
CTCAAAGGGATGCAATAATGGCCTGCTGATGTACTTTGTAGGTTAACAGC
ATTTCCGTAAATTTCAGCTTTATCGTTCACCAAATCAAGTTTCATTCCTg
cttttttcattgcatttttaCTTAAAAGCATCGGAATATCACTATCAGTA
ATATCTGTTTCAATGGTGCATTTTTGTCCAGCAAGGTAGCAGGGCAACAA
TGCTTTACCTTTTGATTTGAGTCGTTCACCACCTCCAAACTTGTAAATAG
TATCACTATCTTTGTAAATAATCTCACTTTTTTCACTGTCACTTAGTGAG
TCAATAAAACACTCCATCCAATCTTGTCCAGAAGCTGTTGACGAGCATCC
ACTGTCGAACACGGCAGCATTGGTAGATTCTGTTAACAACACTGTCATTT
CATCATCATTTTGGCCCGTAAACAGAGCAAATTGTTCAGTCTCATGTAGA
ATGAATGTTCAAGATTTTCATAAGCATGAGGGCAATCTTTCACGAAATGT
AATGTTGAATCGCATGCCATACAGCGGAGTATGTTTCCATCACCATCCAA
TGGGTTCGTTTTGCGACTGGTGGATTGACCTCTTCCTCTGTTGAACGGTC
TGTTTTGGTAGTTGGTGAAACGNATGGATTGACCTCTTCCTCTATTGAAC
GGTCTTTTTTGGTAGTTGGTGAAACGTCCTCTGCCTCGTCCTCTGCCACG
ACCGCGATTTGGAAATTTCTGTTTGAAAGTGATGTTAGCTTCCTCCTGGT
TCGATTCATGGATATCCAATTTGATGCTTTTAAATGGTTCGGTTGCGATG
GGTTTTGCTTGTTGtccaaagaaatttttcaatgagtttttcatttgttt
atataACGTGGTGTGTTCATTATAATTAACTCCTGTCAGAACCATAAGAC
GATCATTATTTAGCAACCCTGAGTTCTCAAGTAGTTTAAATGCTAGGACG
CTTTCCGGCaactccattttgaatttttttgttttattgtaaCGCTTCTC
GAATTCAAGTATGTACGTATCCATTGTTTCACCTTCAACTTTCTTATATC
GATCGAAATTGACGTAATATTCGTACACTTCCGCCAACTCATCTTTTTTA
AACACTGTATCAAAGAACGCTATCAAAGTTTCTACGCCATCGTCTTTTTT
CAGATCATCAAGATCATCTTCATTGAATACTTTGTCTCTAATTTGGGATT
TGTCATCCTCTGGTAGAGACAAAGCTACCGCTAATCCTTGCTTCTTCTTG
GCAAGGTTTGTGACATAAGTCCAAGCACGCAATTCTTCTACGTATCTCGT
ATAAGGTTTGTCATCTCCAAAGGCTGGGGGCTTTTGAAAACTTTCTGATG
ATGCCATTTTGAACCACTTCTGCTACCATGAAAAGTCAATAAAGCTGAAT
AATATAAAAGCCCCACAGCCACACCAAATgctaatattttaaaaatatat
actaGCCTATAACGATCAGAAGAATATGAACGTTaacattttttccttat
atttctatgtttttcacacaaaaacattattgataacaatgctcaccatt
aagcatgattcaattaataatcaataaaactgatttttgcgaccagaact
tcctatttattttttccctacaacccttccctctccccccatcaactagt
cagaaaatctgccgtatactatcttcgctttctaaTTTGAATGATGACGC
TACTTTTTCCACCATCAGATTATCAAAGGCAAaggtgttgtgtattttcg
ctaaacgctatatctTCTGACATaggtcttcttttttcttttgaaggGTA
TGAAGATTATCGAGCGACTACATACATCAGAGTATTATCAATATCTTGAA
AGGTATTCAAACACGATATGTGGAAGAAAACCTATCGGAATTTTCTTGAA
TGTAAgtgtgttaaaatattttgtgCATGAACAGCGTGCTGGGTCCGGAA
AAAAACAACTGAAGAATGAGAAATTAAAATGATCTTACTTTTTTGTTTAT
CCAGCTTTGCCAGCATAGAAGCAAGCTTTCTTATTAttatatcataaaaa
agaatCCAATCATTAGGTTTACCATTGCTGCAAAATTTTATTATGTTTTG
TCTGTTACATAGATAACCAGTTCAATTGAACCAtagctttttttgttttt
caatttcaggccgTGGACCAGTTAAAAACAGATGGTACAATATTCGAGTT
CCACCAATACGCACAAAGTAGTAAAGTCAAACGGATGAATGATAGTTCGG
TTAGTTATGCGGCTGGTACCCTGGTCTCGTTGTAACACTCTCTTGGGACA
CAGTTTCATTGCTCGAAAACTGTATTGCTTACCAGATATTATGTTTACTT
TGCTTGAGACAGTACCTGACTGGatgatttcaattttcatattgcCTGAA
CAATTCGTCATCTACAAAAAGAAGGAATTGcaagttgaaatttttatgtT
GTTAATGTTATCATCAATCGACTACTGCTTACCGACATCTAGAGACTTAG
ACTATCTTACGCGTTCTCTGTTCTTGAGGATATGGATTTCCTATCAACAT
ttcattaaaggttttatttttaaaaaagtgttcccgtttcatatcagaca
cattttatatcaggacagtcTCTGCA Coding sequence (CDS) from alignment at scaffold_283:39804..50329+ >TCONS_00056820 ID=TCONS_00056820|Name=TCONS_00056820|organism=Clytia hemisphaerica|type=CDS|length=7032bp|location=Sequence derived from alignment at scaffold_283:39804..50329+ (Clytia hemisphaerica)
ATGTCTGAAGTTAGAAGAGCATCGCATGCAGGATCGTGGTATTCATCCTC
AAAGAAAGAACTGAATTCGCAATTAGAGAATTGGCTTTCTAAAGCATCGT
CAAAGAAAGTTGGAACCAGGGCACTTATTGCACCTCATGCAGGTTATAGT
TATTGTGGCGCATGTGCAGCTTTCGCATACAACAGGGTTGATCCAACCAA
CATAAAGAGAGTGTTTATCCTTGGTCCATCTCACCATGTTTCATTGGGTG
GATGTGCATTAACACAAACCAAGACTTACTCCACACCGCTCTATGATCTA
ATAGTTGATCAAGAAATGAATGAAGAATTACACAAGACAGGGAAATTTGA
CAAGATGAGTATTTCGACGGATGAGGATGAACACAGCATTGAAATGCATT
TACCATATATTGCCAAAGTCATGGAAAGtaAGAAAGGCCAGTTCACTGTT
GTACCGGTTTTAGTTGGACACACTTCCCACGATAAAGAATTGATGTACGG
CAAAATTTTTAGCAAATATTTGAAAGACCCGGAAAACCTTTTCGTAATTT
CCAGTGATTTTTGTCACTGGGGAAGCCGCTTCAGATATACGTATTACGAT
AAAAGCAAAGGAGATATACACCAATCTATTGAAGACCTGGATAAGCAGgG
TATGAAGATTATCGAGCGACTACATACATCAGAGTATTATCAATATCTTG
AAAGGTATTCAAACACGATATGTGGAAGAAAACCTATCGGAATTTTCTTG
AATgccgTGGACCAGTTAAAAACAGATGGTACAATATTCGAGTTCCACCA
ATACGCACAAAGTAGTAAAGTCAAACGGATGAATGATAGTTCGGTTAGTT
ATGCGGCTGGTACCCTGGTCTCGTTGTAAATGTCTGAAGTTAGAAGAGCA
TCGCATGCAGGATCGTGGTATTCATCCTCAAAGAAAGAACTGAATTCGCA
ATTAGAGAATTGGCTTTCTAAAGCATCGTCAAAGAAAGTTGGAACCAGGG
CACTTATTGCACCTCATGCAGGTTATAGTTATTGTGGCGCATGTGCAGCT
TTCGCATACAACAGGGTTGATCCAACCAACATAAAGAGAGTGTTTATCCT
TGGTCCATCTCACCATGTTTCATTGGGTGGATGTGCATTAACACAAACCA
AGACTTACTCCACACCGCTCTATGATCTAATAGTTGATCAAGAAATGAAT
GAAGAATTACACAAGACAGGGAAATTTGACAAGATGAGTATTTCGACGGA
TGAGGATGAACACAGCATTGAAATGCATTTACCATATATTGCCAAAGTCA
TGGAAAGtaAGAAAGGCCAGTTCACTGTTGTACCGGTTTTAGTTGGACAC
ACTTCCCACGATAAAGAATTGATGTACGGCAAAATTTTTAGCAAATATTT
GAAAGACCCGGAAAACCTTTTCGTAATTTCCAGTGATTTTTGTCACTGGG
GAAGCCGCTTCAGATATACGTATTACGATAAAAGCAAAGGAGATATACAC
CAATCTATTGAAGACCTGGATAAGCAGgGTATGAAGATTATCGAGCGACT
ACATACATCAGAGTATTATCAATATCTTGAAAGGTATTCAAACACGATAT
GTGGAAGAAAACCTATCGGAATTTTCTTGAATgccgTGGACCAGTTAAAA
ACAGATGGTACAATATTCGAGTTCCACCAATACGCACAAAGTAGTAAAGT
CAAACGGATGAATGATAGTTCGGTTAGTTATGCGGCTGGTACCCTGGTCT
CGTTGTAAATGTCTGAAGTTAGAAGAGCATCGCATGCAGGATCGTGGTAT
TCATCCTCAAAGAAAGAACTGAATTCGCAATTAGAGAATTGGCTTTCTAA
AGCATCGTCAAAGAAAGTTGGAACCAGGGCACTTATTGCACCTCATGCAG
GTTATAGTTATTGTGGCGCATGTGCAGCTTTCGCATACAACAGGGTTGAT
CCAACCAACATAAAGAGAGTGTTTATCCTTGGTCCATCTCACCATGTTTC
ATTGGGTGGATGTGCATTAACACAAACCAAGACTTACTCCACACCGCTCT
ATGATCTAATAGTTGATCAAGAAATGAATGAAGAATTACACAAGACAGGG
AAATTTGACAAGATGAGTATTTCGACGGATGAGGATGAACACAGCATTGA
AATGCATTTACCATATATTGCCAAAGTCATGGAAAGtaAGAAAGGCCAGT
TCACTGTTGTACCGGTTTTAGTTGGACACACTTCCCACGATAAAGAATTG
ATGTACGGCAAAATTTTTAGCAAATATTTGAAAGACCCGGAAAACCTTTT
CGTAATTTCCAGTGATTTTTGTCACTGGGGAAGCCGCTTCAGATATACGT
ATTACGATAAAAGCAAAGGAGATATACACCAATCTATTGAAGACCTGGAT
AAGCAGgGTATGAAGATTATCGAGCGACTACATACATCAGAGTATTATCA
ATATCTTGAAAGGTATTCAAACACGATATGTGGAAGAAAACCTATCGGAA
TTTTCTTGAATgccgTGGACCAGTTAAAAACAGATGGTACAATATTCGAG
TTCCACCAATACGCACAAAGTAGTAAAGTCAAACGGATGAATGATAGTTC
GGTTAGTTATGCGGCTGGTACCCTGGTCTCGTTGTAAATGTCTGAAGTTA
GAAGAGCATCGCATGCAGGATCGTGGTATTCATCCTCAAAGAAAGAACTG
AATTCGCAATTAGAGAATTGGCTTTCTAAAGCATCGTCAAAGAAAGTTGG
AACCAGGGCACTTATTGCACCTCATGCAGGTTATAGTTATTGTGGCGCAT
GTGCAGCTTTCGCATACAACAGGGTTGATCCAACCAACATAAAGAGAGTG
TTTATCCTTGGTCCATCTCACCATGTTTCATTGGGTGGATGTGCATTAAC
ACAAACCAAGACTTACTCCACACCGCTCTATGATCTAATAGTTGATCAAG
AAATGAATGAAGAATTACACAAGACAGGGAAATTTGACAAGATGAGTATT
TCGACGGATGAGGATGAACACAGCATTGAAATGCATTTACCATATATTGC
CAAAGTCATGGAAAGtaAGAAAGGCCAGTTCACTGTTGTACCGGTTTTAG
TTGGACACACTTCCCACGATAAAGAATTGATGTACGGCAAAATTTTTAGC
AAATATTTGAAAGACCCGGAAAACCTTTTCGTAATTTCCAGTGATTTTTG
TCACTGGGGAAGCCGCTTCAGATATACGTATTACGATAAAAGCAAAGGAG
ATATACACCAATCTATTGAAGACCTGGATAAGCAGgGTATGAAGATTATC
GAGCGACTACATACATCAGAGTATTATCAATATCTTGAAAGGTATTCAAA
CACGATATGTGGAAGAAAACCTATCGGAATTTTCTTGAATgccgTGGACC
AGTTAAAAACAGATGGTACAATATTCGAGTTCCACCAATACGCACAAAGT
AGTAAAGTCAAACGGATGAATGATAGTTCGGTTAGTTATGCGGCTGGTAC
CCTGGTCTCGTTGTAAATGTCTGAAGTTAGAAGAGCATCGCATGCAGGAT
CGTGGTATTCATCCTCAAAGAAAGAACTGAATTCGCAATTAGAGAATTGG
CTTTCTAAAGCATCGTCAAAGAAAGTTGGAACCAGGGCACTTATTGCACC
TCATGCAGGTTATAGTTATTGTGGCGCATGTGCAGCTTTCGCATACAACA
GGGTTGATCCAACCAACATAAAGAGAGTGTTTATCCTTGGTCCATCTCAC
CATGTTTCATTGGGTGGATGTGCATTAACACAAACCAAGACTTACTCCAC
ACCGCTCTATGATCTAATAGTTGATCAAGAAATGAATGAAGAATTACACA
AGACAGGGAAATTTGACAAGATGAGTATTTCGACGGATGAGGATGAACAC
AGCATTGAAATGCATTTACCATATATTGCCAAAGTCATGGAAAGtaAGAA
AGGCCAGTTCACTGTTGTACCGGTTTTAGTTGGACACACTTCCCACGATA
AAGAATTGATGTACGGCAAAATTTTTAGCAAATATTTGAAAGACCCGGAA
AACCTTTTCGTAATTTCCAGTGATTTTTGTCACTGGGGAAGCCGCTTCAG
ATATACGTATTACGATAAAAGCAAAGGAGATATACACCAATCTATTGAAG
ACCTGGATAAGCAGgGTATGAAGATTATCGAGCGACTACATACATCAGAG
TATTATCAATATCTTGAAAGGTATTCAAACACGATATGTGGAAGAAAACC
TATCGGAATTTTCTTGAATgccgTGGACCAGTTAAAAACAGATGGTACAA
TATTCGAGTTCCACCAATACGCACAAAGTAGTAAAGTCAAACGGATGAAT
GATAGTTCGGTTAGTTATGCGGCTGGTACCCTGGTCTCGTTGTAAATGTC
TGAAGTTAGAAGAGCATCGCATGCAGGATCGTGGTATTCATCCTCAAAGA
AAGAACTGAATTCGCAATTAGAGAATTGGCTTTCTAAAGCATCGTCAAAG
AAAGTTGGAACCAGGGCACTTATTGCACCTCATGCAGGTTATAGTTATTG
TGGCGCATGTGCAGCTTTCGCATACAACAGGGTTGATCCAACCAACATAA
AGAGAGTGTTTATCCTTGGTCCATCTCACCATGTTTCATTGGGTGGATGT
GCATTAACACAAACCAAGACTTACTCCACACCGCTCTATGATCTAATAGT
TGATCAAGAAATGAATGAAGAATTACACAAGACAGGGAAATTTGACAAGA
TGAGTATTTCGACGGATGAGGATGAACACAGCATTGAAATGCATTTACCA
TATATTGCCAAAGTCATGGAAAGtaAGAAAGGCCAGTTCACTGTTGTACC
GGTTTTAGTTGGACACACTTCCCACGATAAAGAATTGATGTACGGCAAAA
TTTTTAGCAAATATTTGAAAGACCCGGAAAACCTTTTCGTAATTTCCAGT
GATTTTTGTCACTGGGGAAGCCGCTTCAGATATACGTATTACGATAAAAG
CAAAGGAGATATACACCAATCTATTGAAGACCTGGATAAGCAGgGTATGA
AGATTATCGAGCGACTACATACATCAGAGTATTATCAATATCTTGAAAGG
TATTCAAACACGATATGTGGAAGAAAACCTATCGGAATTTTCTTGAATgc
cgTGGACCAGTTAAAAACAGATGGTACAATATTCGAGTTCCACCAATACG
CACAAAGTAGTAAAGTCAAACGGATGAATGATAGTTCGGTTAGTTATGCG
GCTGGTACCCTGGTCTCGTTGTAAATGTCTGAAGTTAGAAGAGCATCGCA
TGCAGGATCGTGGTATTCATCCTCAAAGAAAGAACTGAATTCGCAATTAG
AGAATTGGCTTTCTAAAGCATCGTCAAAGAAAGTTGGAACCAGGGCACTT
ATTGCACCTCATGCAGGTTATAGTTATTGTGGCGCATGTGCAGCTTTCGC
ATACAACAGGGTTGATCCAACCAACATAAAGAGAGTGTTTATCCTTGGTC
CATCTCACCATGTTTCATTGGGTGGATGTGCATTAACACAAACCAAGACT
TACTCCACACCGCTCTATGATCTAATAGTTGATCAAGAAATGAATGAAGA
ATTACACAAGACAGGGAAATTTGACAAGATGAGTATTTCGACGGATGAGG
ATGAACACAGCATTGAAATGCATTTACCATATATTGCCAAAGTCATGGAA
AGtaAGAAAGGCCAGTTCACTGTTGTACCGGTTTTAGTTGGACACACTTC
CCACGATAAAGAATTGATGTACGGCAAAATTTTTAGCAAATATTTGAAAG
ACCCGGAAAACCTTTTCGTAATTTCCAGTGATTTTTGTCACTGGGGAAGC
CGCTTCAGATATACGTATTACGATAAAAGCAAAGGAGATATACACCAATC
TATTGAAGACCTGGATAAGCAGgGTATGAAGATTATCGAGCGACTACATA
CATCAGAGTATTATCAATATCTTGAAAGGTATTCAAACACGATATGTGGA
AGAAAACCTATCGGAATTTTCTTGAATgccgTGGACCAGTTAAAAACAGA
TGGTACAATATTCGAGTTCCACCAATACGCACAAAGTAGTAAAGTCAAAC
GGATGAATGATAGTTCGGTTAGTTATGCGGCTGGTACCCTGGTCTCGTTG
TAAATGTCTGAAGTTAGAAGAGCATCGCATGCAGGATCGTGGTATTCATC
CTCAAAGAAAGAACTGAATTCGCAATTAGAGAATTGGCTTTCTAAAGCAT
CGTCAAAGAAAGTTGGAACCAGGGCACTTATTGCACCTCATGCAGGTTAT
AGTTATTGTGGCGCATGTGCAGCTTTCGCATACAACAGGGTTGATCCAAC
CAACATAAAGAGAGTGTTTATCCTTGGTCCATCTCACCATGTTTCATTGG
GTGGATGTGCATTAACACAAACCAAGACTTACTCCACACCGCTCTATGAT
CTAATAGTTGATCAAGAAATGAATGAAGAATTACACAAGACAGGGAAATT
TGACAAGATGAGTATTTCGACGGATGAGGATGAACACAGCATTGAAATGC
ATTTACCATATATTGCCAAAGTCATGGAAAGtaAGAAAGGCCAGTTCACT
GTTGTACCGGTTTTAGTTGGACACACTTCCCACGATAAAGAATTGATGTA
CGGCAAAATTTTTAGCAAATATTTGAAAGACCCGGAAAACCTTTTCGTAA
TTTCCAGTGATTTTTGTCACTGGGGAAGCCGCTTCAGATATACGTATTAC
GATAAAAGCAAAGGAGATATACACCAATCTATTGAAGACCTGGATAAGCA
GgGTATGAAGATTATCGAGCGACTACATACATCAGAGTATTATCAATATC
TTGAAAGGTATTCAAACACGATATGTGGAAGAAAACCTATCGGAATTTTC
TTGAATgccgTGGACCAGTTAAAAACAGATGGTACAATATTCGAGTTCCA
CCAATACGCACAAAGTAGTAAAGTCAAACGGATGAATGATAGTTCGGTTA
GTTATGCGGCTGGTACCCTGGTCTCGTTGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00056820-exon-scaffold_283-1491911889:39804..39880 | TCONS_00056820-exon-scaffold_283-1491911889:39804..39880 | Clytia hemisphaerica | exon |
| TCONS_00056820-exon-scaffold_283-1510915933:39804..39880 | TCONS_00056820-exon-scaffold_283-1510915933:39804..39880 | Clytia hemisphaerica | exon |
| TCONS_00056820-exon-scaffold_283-1575043694:39804..39880 | TCONS_00056820-exon-scaffold_283-1575043694:39804..39880 | Clytia hemisphaerica | exon |
| TCONS_00056820-exon-scaffold_283-1491911889:40434..40515 | TCONS_00056820-exon-scaffold_283-1491911889:40434..40515 | Clytia hemisphaerica | exon |
| TCONS_00056820-exon-scaffold_283-1510915933:40434..40515 | TCONS_00056820-exon-scaffold_283-1510915933:40434..40515 | Clytia hemisphaerica | exon |
| TCONS_00056820-exon-scaffold_283-1575043694:40434..40515 | TCONS_00056820-exon-scaffold_283-1575043694:40434..40515 | Clytia hemisphaerica | exon |
| TCONS_00056820-exon-scaffold_283-1491911889:40754..40822 | TCONS_00056820-exon-scaffold_283-1491911889:40754..40822 | Clytia hemisphaerica | exon |
| TCONS_00056820-exon-scaffold_283-1510915933:40754..40822 | TCONS_00056820-exon-scaffold_283-1510915933:40754..40822 | Clytia hemisphaerica | exon |
| TCONS_00056820-exon-scaffold_283-1575043694:40754..40822 | TCONS_00056820-exon-scaffold_283-1575043694:40754..40822 | Clytia hemisphaerica | exon |
| TCONS_00056820-exon-scaffold_283-1491911889:41266..41378 | TCONS_00056820-exon-scaffold_283-1491911889:41266..41378 | Clytia hemisphaerica | exon |
| TCONS_00056820-exon-scaffold_283-1510915933:41266..41378 | TCONS_00056820-exon-scaffold_283-1510915933:41266..41378 | Clytia hemisphaerica | exon |
| TCONS_00056820-exon-scaffold_283-1575043694:41266..41378 | TCONS_00056820-exon-scaffold_283-1575043694:41266..41378 | Clytia hemisphaerica | exon |
| TCONS_00056820-exon-scaffold_283-1491911889:42814..42925 | TCONS_00056820-exon-scaffold_283-1491911889:42814..42925 | Clytia hemisphaerica | exon |
| TCONS_00056820-exon-scaffold_283-1510915933:42814..42925 | TCONS_00056820-exon-scaffold_283-1510915933:42814..42925 | Clytia hemisphaerica | exon |
| TCONS_00056820-exon-scaffold_283-1575043694:42814..42925 | TCONS_00056820-exon-scaffold_283-1575043694:42814..42925 | Clytia hemisphaerica | exon |
| TCONS_00056820-exon-scaffold_283-1491911889:43952..44171 | TCONS_00056820-exon-scaffold_283-1491911889:43952..44171 | Clytia hemisphaerica | exon |
| TCONS_00056820-exon-scaffold_283-1510915933:43952..44171 | TCONS_00056820-exon-scaffold_283-1510915933:43952..44171 | Clytia hemisphaerica | exon |
| TCONS_00056820-exon-scaffold_283-1575043694:43952..44171 | TCONS_00056820-exon-scaffold_283-1575043694:43952..44171 | Clytia hemisphaerica | exon |
| TCONS_00056820-exon-scaffold_283-1491911889:49500..49604 | TCONS_00056820-exon-scaffold_283-1491911889:49500..49604 | Clytia hemisphaerica | exon |
| TCONS_00056820-exon-scaffold_283-1510915933:49500..49604 | TCONS_00056820-exon-scaffold_283-1510915933:49500..49604 | Clytia hemisphaerica | exon |
| TCONS_00056820-exon-scaffold_283-1575043694:49500..49604 | TCONS_00056820-exon-scaffold_283-1575043694:49500..49604 | Clytia hemisphaerica | exon |
| TCONS_00056820-exon-scaffold_283-1491911889:49863..50329 | TCONS_00056820-exon-scaffold_283-1491911889:49863..50329 | Clytia hemisphaerica | exon |
| TCONS_00056820-exon-scaffold_283-1510915933:49863..50329 | TCONS_00056820-exon-scaffold_283-1510915933:49863..50329 | Clytia hemisphaerica | exon |
| TCONS_00056820-exon-scaffold_283-1575043694:49863..50329 | TCONS_00056820-exon-scaffold_283-1575043694:49863..50329 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_283 | supercontig | scaffold_283:39804..50329 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR002737 | MEMO1_fam |
Blast
BLAST of TCONS_00056820 vs. Swiss-Prot (Human)
Match: MEMO1 (Protein MEMO1 OS=Homo sapiens GN=MEMO1 PE=1 SV=1) HSP 1 Score: 385.571 bits (989), Expect = 5.036e-132 Identity = 179/293 (61.09%), Postives = 221/293 (75.43%), Query Frame = 2
Query: 23 NMSEVRRASHAGSWYSSSKKELNSQLENWLSKASSKKVGTRALIAPHAGYSYCGACAAFAYNRVDPTNIKRVFILGPSHHVSLGGCALTQTKTYSTPLYDLIVDQEMNEELHKTGKFDKMSISTDEDEHSIEMHLPYIAKVMESKKGQFTVVPVLVGHTSHDKELMYGKIFSKYLKDPENLFVISSDFCHWGSRFRYTYYDKSKGDIHQSIEDLDKQGMKIIERLHTSEYYQYLERYSNTICGRKPIGIFLNAVDQLKTDG--TIFEFHQYAQSSKVKRMNDSSVSYAAGTLV 895
N R ASHAGSWY++S +LN+QLE WLS+ S K RA+IAPHAGY+YCG+CAA AY +VDP+ +R+FILGPSHHV L CAL+ Y TPLYDL +DQ++ EL KTG F++MS+ TDEDEHSIEMHLPY AK MES K +FT++PVLVG S KE +GK+FSKYL DP NLFV+SSDFCHWG RFRY+YYD+S+G+I++SIE LDK GM IIE+L + YL++Y NTICGR PIG+ LNA+ +L+ +G F F YAQSS+ + DSSVSYAAG L
Sbjct: 3 NRVVCREASHAGSWYTASGPQLNAQLEGWLSQVQSTKRPARAIIAPHAGYTYCGSCAAHAYKQVDPSITRRIFILGPSHHVPLSRCALSSVDIYRTPLYDLRIDQKIYGELWKTGMFERMSLQTDEDEHSIEMHLPYTAKAMESHKDEFTIIPVLVGALSESKEQEFGKLFSKYLADPSNLFVVSSDFCHWGQRFRYSYYDESQGEIYRSIEHLDKMGMSIIEQLDPVSFSNYLKKYHNTICGRHPIGVLLNAITELQKNGMNMSFSFLNYAQSSQCRNWQDSSVSYAAGALT 295
The following BLAST results are available for this feature:
|
