TCONS_00056835 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00056835
Unique Name	TCONS_00056835
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2916

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_283:105680..122743-

transcript sequence

>TCONS_00056835 ID=TCONS_00056835|Name=TCONS_00056835|organism=Clytia hemisphaerica|type=transcript|length=2916bp
TTCGACGCAGGTGGTTTTTTTTGTGGAAGAGAAGtaaaataaaaatgaat
acaAAAAGAATACTATTATTGGTTATACTCAGTGCAACTTTTTTACAATG
TAGAAAACTTAAAAAGGTTGTTACAAAGAAatcagaaactttcaatgatg
aGACAAACAactttattttacaaaagaGACTTCACAAACTGAAAGAATAT
TCACAGAAAGCTACAAAGCGATTAGCAGCCCTTTCAGATTATTCCAATTT
CTATAATAAATATTTGACGGAAATTTTGCGGAGCAGAGTTCCTGGAACCG
TTGGCCATGCCCGTGTGAAAAATTTTATCATACGAAAGTTGCAAGAATAT
AATTGGGATGTCAAGACGCAGAACTTCACCATGTGGACACCTCTTGGACC
CAAAAACTTCACTAATATTATTGGCACGCTTAATCCAAGAGCTGATAGGG
TGCTAGCGTTAGCGGCTCACTACGATTCGAAAATCTTACCGGTTGTTAAC
GGCAAGTTTTTCACGGCAGCTACCGATTCGGCCGTTCCATGTGCTATGCT
GTTGGATTTTGCAAGAGATTTGAGCGACAAAGCAAAAGAAATtacgtcgA
CATTGGAACAAGTATCGCCACAACTTTTATTCCTTGATGGGGAAGAAGCA
TTTGTTGAATGGACCAAGACAGATTCAATCTATGGATCCAGATACATGGC
TGCTTCAATGTCCAATGCTTCCCATTGGAATCCGAAATTAGCTTTACACG
AAATCAGTCAGTTAGATTCTATGgATGCTTTTGTGCTTCTCGATTTGCTT
GGTGCAAAAGATCCGACCTTTTATAATTGGTTTCCAACCACGAGTCGATT
GTATGAAAGTTTGAAGAAGATAGAGAAGAACCTTCGAGCAGAGGGCCAGT
TATTTGGTGTGAATCACAAACATTACTCTGGTCACTACTTCACTGGCCAA
CGGCCTGAAGATATCGGAATCTATGGCAAGATTGATGATGACCATGTCCC
GTTTATGCAAAAAGGTGTTCCCATCCTACACATCATCCCCTACCCGTTCC
CCTCCACGTGGCACACACTCAATGATGATGAAGAACATCTCGATCCAACC
ACCATTGAAGATCTTCTCAAAATATTTCGCCATTTCATTTTCTCCTATTT
CTCACTTGAATGAATGGAttgaacgaatgaatgaatatAAACTCACCTGG
CACGCGATGTTGTTTTGGTGTTCGTCTAACGTCCACGCCCATCTACATAA
CGTAATATAAATGTTCGATGAACGTACTGTTCAAAAGTTGTGTTGGTTTC
TTCCTTTTCCCCGGTGAGTGAATATTGAGTTTGGAATATTATTAAATGAA
ACGAAATTTGGGATTTTTAACTAGTATTTATAGTGAATTTGATTTTGGAT
GGTCTACAAAAGCACACTAAACTAGAAAATGTATCAAAAATGGAAATGAT
AACTCTGCGACAAGGAAATTACCAAAACAACGAAATCCTTATTAACATAC
GTTAGTTAAACGTTTAAATAACATTCAAGTGATCTGTGCCTTTTGTGGAT
TATTCAAAATCATGGCAGACTGTCATTTTGAATTATTGTCATATCTAAAA
TAAACTGTGATGTACAGTTGGAGTCTCAATATAAATCGAACGTCTATGGA
AAAGTATATTTATTGTTCGAATTGTAGAGACTCCACTGTCAAAGGTTTTG
TTTCCATCATAAGCAACTAGCCCCAAACACCACCAACAGTCAATCATTAT
AAGTGCTTGTGGGCTAAACTCTGTAAGTTTTTCATATGacaatctttcat
ttttaaataatGTAAATTCCTAAAAGAAACAATTATAATTTATTAGCACT
TAAAAAATGATATCTAAGATATTTATTCAATGTAACTGTGATAAATGACT
CGGTTTTTAACATGAAATCAAGTCGATTTTTAATGTGccggttgtttttt
ttattacaatttCGTTTTCTGGGCTGCACATATGCCTCTaaaatttagag
attttttaTACTCTTTTGTTTAACATATAAAAGAAATAGTGTTAGACTAA
AATACTTACCTAAAAGCTGTTTGTCTGTCTGACAGTAAGACAAAGAAGAT
GtttcaatttaaaagaaatttgatttgatATAACTTGGAGAAAGGTATCC
CAGAGCTGATTTTTACTTATCATTTTCAGAAATaatatgaaattttcttc
cTCAAATTTTATTAGTTTCAATGGTTCACTTATGCATGATATTTATGATG
ACGTAatattttatacggaagcacaaAAATATAGCCTGgcactagtttta
ttgtttaaatcaaaaatcagtGACAAACACACGGTatttttttgggtgtt
tccctattaaacattacgtcatgaatatcacgaatacGGTACTTATGTCT
TGCACACTTTTTTGGATACCATATAAAAAAGAAGTGCATCTAAATTTATT
ATCAGATATTCCGATGGTGGATTGGTGGCCGCCCAAtataaagctctgaa
ggagcgggccattttcccatcggagaggaacgatagtcggcctttgatgt
gccgcatctcCAGTCAGGTTCAACTTCTTTCGCAcgtaaacctaaaaata
ttttggttggactCGCCAATCCCCGAatacgagggctgggttaccacaTA
CCAGGCCTCCCACTGCAAAATCCTATATGCggacttgcaaaattccgtaa
tctaaacatACCGGATGTTGAAATTTTACCCGACCATCAAAGCTTTAGCG
TgccggatgaaaatttctgcatgtGGTTGCCTGATAACATTAGGTTAATT
TTCcgtattttgaaattatatgcATTTTAAAGGGATATTCTATTATTAGT
GACAAGAATAATgatattgttaaaaaaaatataaaatatattctaTAAGT
AAATACTCGAATTGGA

Run BLAST on NCBI

transcript from alignment at scaffold_283:105680..122743-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00056835 ID=TCONS_00056835|Name=TCONS_00056835|organism=Clytia hemisphaerica|type=transcript|length=17064bp|location=Sequence derived from alignment at scaffold_283:105680..122743- (Clytia hemisphaerica)
TTCGACGCAGGTGGTTTTTTTTGTGGAAGAGAAGGTCTGTTTGAAATTAT
TTATACAATATATGAATGAAATATGTAAATGCATTATATCATCCTACTGT
TTCTCTCTGTGTTTCTATTAAAGGTAAAACTATTTTATTAACTTCTTTAA
TAAAGTAATCAGTTCATTTTCGCCATGTTGTGAAAGGAGCCTTCCATGAA
AAACATTAATTATTTCATATGAAAAGAGCAAACAGTCTATTTATTGTGTG
TCTTTCAGCTTTATTATACCACGGTTTGGTTTTCATTAGAAATGGTTGTG
GTTTATTAGAAAGTGCTTGTCTGCTAGGCTTACGTTTCTATATCGTCCTT
CATTTTGAGTGTATCGCCATGTCAATTCAAGACAGACTTATGTAAGTCCA
TTTTTTCGAAAATTGACTTAAGACCATGTTTTAGAAAATTGACTTAAGAC
CATAATCCCCTATTTCCGCATGCACACTTTCCAAAAACAGCCTTAAGTCC
ACAGAATTCTAATGGGAAAGAGGTGTATTTTACAATTCAAAATAAATAAG
AATTTAGAATGTTCCGTAAGGCGATGGGAATTTGATGTTCTGTTTAGCCT
TAATAAGTCCTAAATTTTATTGCAAATTTTATTTTCTATGGAGCATTGAC
ATGAAAAATGGAAAAAATGGACTTAAGGCTGTCTTGAATTGACACGGCGA
TATATGTATACATATTTTTTTTTAATAAGCATTGCACTTGTAAGCATATC
TAGGCTCAAAAAAAAAACAAATATGGGGAAAAATTATACATATGCTAAGC
ATTACCTCGAGCCTATGAAAAAAGTATAAGCTACTTTTTAGTATGTATGG
ATATAAGCGACCCCTTTCATCATGTGATGTCATATGTTTTGGATTACCTT
GTTTAGCCTAAATAAAATATATTACAAATTTGGATGATAGAGGCAATATG
CCTCCAACTTTGCCTCCGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGAATTCTGTC
TCTTTTATTCCAGATTTTGTTAAAAAAGACCATACAGAAAAGAAGACTAA
GCGAGAAAATCAAAACAAGCTGAAAAATTATGAAAGGGGTCTATATAAGC
AGTATTAAGTATTAGGGTATAAGCATCCCTCAAGCATTTTTTCAGCCTTG
TTGAGCTTTCAACCTAAGCATCTCTGAGCCTGTTTTTGGATTTTTGTATG
CTTATATAAAAAAAACATGTACTCTTCGAAATAAGGTGAACTGCTCTTCT
TGTTTTGGGCCATTCCAGAATTTGTCTGTAACAGGGGGCAGACGACGCAG
GATTTCTGAGGGCATAAGTTTTCACCAAAATTCGAAATTTCCAAAGCAAG
AGAAGGAAATGTATGAATTTCCAAGGCAATTGAATTAAAAAAGGCAAAAA
AGAGTGGAATTTCCGATGCATTTTGCTAAAGTACATGGATTTTTATCGGA
ATTTCCGACCACCACTGGAAAAGAAAAATTATTTTTGAGGCTAGAAAAAA
TTTAAAAATGCACGTCGTCCGACGGGGGTAACAAAAATTTTCTGGAAGGG
AAGCTTCCGATAAACGGACGCTAAAAAGGCATGGAAAATGGTCTGTTTTT
TATTAATTTTATCATAACTTTTGATCCAATGAACCAAATTTTATAAATGA
TCCACCAAAATTTAAGTTTATATATCTTTTCCCTTTCCAAAAGAGAAGGG
TTTGGTTTGTTACAAGTCATAGAACTTGAGAAAATCTAATTGAAAGAGAG
AAACATTTTTGTGGTGCACCTGGTATCAATAAGCAAAGTCTAGTGTATTT
TCTATTCTATCTCAGTAACTGGGAAGGACTACTAATACTGCATACGAAGC
TGACAAAAGGGCTTTCAAGAGTTGTACAAACTAGAAGTTTCTTAAAACTG
CATTTTTTAGAAAAAAACCAATTTAATGATCTGCCAAATATTGTACATAA
AAAAAAATTGGAAATTAAACTAAAGTGTTTTTATTGTTGACAAATTACAT
TTTTGTAAAGATTGAATAGGTCAATATTTGTGATTTTCGATTAAATTCAC
AATGTAACTTTTTCATTCGCTTTAAACATAACTTTTGATCTAATGAACCA
AATTTTTTAGATTTAAAGTTTATCTTTCTCCTTCTCAGTTCAAAGAGTAT
GTGCTTATGGAAGTTGTAGATTTCAATAAAATTAAGTTAAAGAGGGAAAC
TTTTTTGCCATGCACCCAGTCCAGGGTCTTATCTTTGACCTTTTTTTGCT
TTTTTTTGCTAATTGCTTGTATAATCAATAACTTGTGAGTAATTTCCTGA
AATGCAAACATTGAGATTTTTGCTAAGTTAATATTTACCAAGTATATCTT
ATTATTGACCTTAGACCTGCTTAGACAAATGTCATTGTTTTAAGCATTGT
TTTTAAATCATTCTTTGATTAATTAAAGCATTAATTTGAAGTTTTTCAGG
AATACTTTTTAGCATGTGTGATAATTAGCCTGGTTAATTTTCCTGTCTTT
CGTGCCAAAAAGAATTGCTACAACTTTCAGGTTATTAAATACCAACCAAT
CCAAACATTTATGAAGCTGAGTGATGATCTCGCAAAAAGCAATGCAAAAT
CTTTTCCATCAGAAATGTGGACCAATTCTTTTATATTCTTACTACAATCA
GTGACAAAATACTTGGAACAAAAGGGAAATTCCCCACAAAGTTTTATAAC
CACAAACAATTTGGAAGCGCTCTGAATTAGGTTGAAAGGGTAGAGTTTTA
ATAACTCTGAGTTTTAACGGAATAATTGATGAAATCAAGTTGAAGGCCCG
AAATTGACATTCTTGCTCAAACTTCAATTTTCGAAAAATTGTAAAGTAGC
CAAAATTGCCAATATGTTATGGCACTGATTGTAGGCAACAATGTTTTAAC
GTCAAAGCGTTTTGTATGGTTTTGTATTATGTAATTATTTTCTTCATTTT
GTTTCAGTAAAATAAAAATGAATACAAAAAGAATACTATTATTGGTTATA
CTCAGTGCAACTTTTTTACAATGTAGAAAACTTAAAAAGGTTGTTACAAA
GAAATCAGAAACTTTCAATGATGAGACAAACAACTTTATTTTACAAAAGG
TAATCTACTTTCTTTTCATTTTTTATGCACGAAAATTTAGCATTAGAGCT
CAAGATCATAAAAAGTTCGATTCGGGGAAAATTATTCCTCTGATTATATA
ACAGATTATATAGCTCATAGTATGAAGTAGATCCTTCTGAAGTAGATCAT
TTTTTAACGACTTAGTAATTTAAGATCTGATAAATAATAAATCAGTAAAG
CATAATTAAACTTTTCAAAAATATATTTAATGATTTATATTATGCTGAAA
TTTTTCCAAAAAGTTAAACCTTAAAGAAAGAGACATTCCAATAATGTTTA
ATTAGTAAATATTTATGATGATTCCGTTTAAAAACTATTAACTGAACTAT
TTTAAATTGAAATATAGTCAGTCTGACTTACATAAAAAATCTCTTGGCAA
CTGTTAACTTCAAAATCTCAAATTAGTATTTGGAATTCTTTGCATGGTGC
CCTCAGTTAAAAAAAGAGTTTAATAGCAAAAAAAACTATTTTAAAATATA
ACAGTAGTTTTTTAATGAATTATTAAATACTTGAACTAACTTGAGTCAAA
AATGACTCCTTACTGAGTTTAAAAGTACGGTCTAGTTGTGTAAAAATTAT
ACACAAAAAGGCGTAAAAGTAAAATGAGACTTTGCACAATTGTAGTTCAG
GGTTAGAAAACGGATTTAAATTTCAGAACCAAAAAATTGGCACCTGTTTG
TGTACTTTACAGACCAGAACAGGTTCCCCGCCTAAAATGATTTTTTTTTC
TCCAAAGTCATGTTACATAATTCAGTTCAGTCCCTCTCTTATTTGTAATA
CTGTGAAATTTTGTCTAAAAATTAATTAAGGTTCAGGGAGGGTTTATCAA
AACACTCGTCTTCCTGAATGTTATCGATTTTTACTGCCGAGAATTGAAAA
AAGGAGGAATATAATAGAGGCCACTATATCGCAAAAAAGCTTCCAGTACG
TGCAGGAGCTTGTGCCAAGGTACTTTATGATTGATTATTGCTCTTCACAT
ATAGAAGATCAAAATTTGAGAGGGAGGCTTTGGGCGATCCCCCGTTGCTA
ATATATTTGTTTTTAAAGAATGGAATCAAAAACCGATACTGAACGGAGAC
GTGCCTTCCCTTGGGTGTTTGTTTTTCAATGATAAATACTGTTTTTCTTT
TTAATTCAGAGACTTCACAAACTGAAAGAATATTCACAGAAAGCTACAAA
GCGATTAGCAGCCCTTTCAGATTATTCCAATTTCTATAATAAATATTTGA
CGGAAATTTTGCGGAGCAGAGTTCCTGGAACCGTTGGCCATGCCCGTGTG
AAAAATGTAAGTCCAATTCTTTTGCTGCAGGCTTCTTTATTAATTTCGAC
CTTCAGTTTAAACCTATTTTCAACTCTCTTGAAAATATGTGATACAAATA
AGATTTACGAATCTTTAAATGAGTATTTAGAAAGAGCTCGTCAATCGCAT
TGAAAGTGTCTCTAGGATTTAGGAAATTTTTACAATATGTGAAGAATGGG
TCTTAATGGGTCCTTATTTAGACGGTTCACTTTCTACCCTTCTTGGCACC
GTTTCTTGTGAGAGACAGAAAAAGATTTGATGGATGTAAAAGCAGACGGA
TCAAATCTCTGAAATACAAAAGTTCGACCGTCTAAACTAGAAATAAAAAC
ACTTCGAGCGAGAAAAGGGACACTGAATGATTTAGATTTCCTCGGTTGTG
ATAATATGTCTATCAGAATGGAATTATATCCATATCGAAATTTGTGTTTT
TCCGTAGTTTCGTTACAAAACTGGAAATAGTATATAAAGATTATAAATAT
CTTTCATTATGATATTCCTACACCTTTTGGTAGGAAAGAAACTGTAACTG
TATGATTTTTAAGACCTCCTTTTTCCCAGTTTTCATCGATTTGATTTCAT
CTCGATAAGAATAGAAAATAGGCTATTTTTACATAACTGTTACCGATCTG
ATCTGACCGATCCAATGTAATAAGACTAACTATGATCTTTTTTCAGTGGC
TCTTATCGTTTGTTTTCTTTACGTTCGTTGCATTCTAAGAGCGTACAATG
AGTAAAAGTTTCACTTTTTCTGCAAGGCGGAGTTATTTTAAACCGTTAAA
TAAACCCTAAAAGACAGTGAAAGTTTAGTCGTTATTTACGACCAAATAAG
GCATGCGCAGAAAAATATTGGGCAGTAGAATCGGATAAACTTCTGGTCAA
CTCTATATTCAGCACAATTGTGTTATTAACAGTTGGCATGACTACTGAGG
AAACGAGTGTTGTTTTTGAGTTTCCCTTTTTATACCACCGTATATTTATG
TTGGCTTGTCTTTGTAGTCGTGTATTTATTTTTAACTGTTAAAAAGTGCC
GTTTTATGGAATATTGTCATTTTTTGAGCTCTTTTTTCGTACCAATTTTA
AGTAAGTGCCGGTGTGACCGTTACCATAACTTTTTTCTGGTTATTTAAAT
GAATTGTTCATCCCCTAGAGAACATATCTCTGCCCGCTCTTTTTTCAGTT
TATCATACGAAAGTTGCAAGAATATAATTGGGATGTCAAGACGCAGAACT
TCACCATGTGGACACCTCTTGGACCCAAAAACTTCACTAATATTATTGGC
ACGCTTAATCCAAGAGCTGATAGGGTGCTAGCGTTAGCGGCTCACTACGA
TTCGAAAATCTTACCGGTTGTTAACGGCAAGTTTTTCACGGCAGCTACCG
ATTCGGCCGTTCCATGTGCTATGCTGTTGGATTTTGCAAGAGATTTGAGC
GACAAAGCAAAAGAAATTACGTCGGTATGTTTTTTTCTTTCGTTTTTAGT
CTTCTACACGTTTTTTATAAGAACAATCTATTTCAGAACATAAGGCTTCG
ACAGAACATTTTAACGCTTTGTTGACTCTAAAACACCTAGCTTCTTAGGA
AAAGTGACAAAAATACTTACAGTATGATGAAAATAAGAACATATTAAGAA
CATTTTTAGGCTTTAAAACTCAAAAAGTTAAGAACGTCCATAGGCTTAAA
ATGTTTTGGATATTCTTATTAAAAAATGTGTACTGGTCATTGGTCAATGT
CTTATCGACGTTTCGTTATTTAGGGAGGCGGAGTCATATTAATTTTTACG
TGAGCTTTAGATTTTTTAAATGCCCGCTATGATTAGAAAAATACTACTAT
GAAAATTAACGGGAGCTTTTTAATAGTTCACCATCACCTAAAAACTTCGC
CCAATCCGCAAACAGTCTTTATTTAGAAATGAATAAATTTTTAAAACAAG
TCTTAAACCAAAACAAAATTCAACATATGTCATTATTAAAACCTTTTTTA
AACGCCATCCAAATAATAAATAGGGAAAATTTAATGGAAAAATTTAAATT
TTCCTTTTTCGTTTCTATTTTCATTTACATATTATTTTATTTCGTTTTAA
CCGGGTGCTATACTTTTATTTTTGGAACTCCTTTCTTACTTTACGATGTT
TTTTTCAATCTACCGTTTAAGTTTTTATCATCAAAATTTAACACAGACGG
ACTTTTATTGGGTTTTCAATCACCCATCATACATCAATCACACAAAAAAC
TTTTTATCCTTTTCATCCTTTTCGGAACATGTTGATGGCGATATACAAAC
GCCCTTAAAATGACCAGCGATAAAGCTCGCCCTAACTATGAAAATGATTT
AGAAAAAATAATAATTGGGTACCACCAGTACGCCATTTTTCGGTTTCTGC
TAAGTTTCATGCCATCCACTTGGTCGTGGCTCTCCTCGGTTCTAACCTAC
TCTTGTCTCCAGAATAGACGCCCCCCCCCGCTAATTAANAATTACGTCGG
TATGTTTTTTTCTTTCGTTTTTAGTCTTCTACACGTTTTTTATAAGAACA
ATCTATTTCAGAACATAAGGCTTCGACAGAACATTTTAACGCTTTGTTGA
CTCTAAAACACCTAGCTTCTTAGGAAAAGTGACAAAAATACTTACAGTAT
GATGAAAATAAGAACATATTAAGAACATTTTTAGGCTTTAAAACTCAAAA
AGTTAAGAACGTCCATAGGCTTAAAATGTTTTGGATATTCTTATTAAAAA
ATGTGTACTGGTCATTGGTCAATGTCTTATCGACGTTTCGTTATTTAGGG
AGGCGGAGTCATATTAATTTTTACGTGAGCTTTAGATTTTTTAAATGCCC
GCTATGATTAGAAAAATACTACTATGAAAATTAACGGGAGCTTTTTAATA
GTTCACCATCACCTAAAAACTTCGCCCAATCCGCAAACAGTCTTTATTTA
GAAATGAATAAATTTTTAAAACAAGTCTTAAACCAAAACAAAATTCAACA
TATGTCATTATTAAAACCTTTTTTAAACGCCATCCAAATAATAAATAGGG
AAAATTTAATGGAAAAATTTAATTTTTCCTTTTTCGTTTCTATTTTCATT
TACATATTATTTTATTTCGTTTTAACCGGGTGCTATACTTTTATTTTTGG
AACTCCTTTCTTACTTTACGATGTTTTTTTCAATCTACCGTTTAAGTTTT
TATCATCAAAATTTAACACAGACGGACTTTTATTGGGTTTTCAATCACCC
ATCATACATCAATCACACAAAAAACTTTTTATCCTTTTCATCCTTTTCGG
AACATGTTGATGGCGATATACAAACGCCCTTAAAATGACCAGCGATAAAG
CTCGCCCTAACTATGAAAATGATTTAGAAAAAATAATAATTGGGTACCAC
CAGTACGCCATTTTTCGGTTTCTGCTAAGTTTCATGCCATCCACTTGGTC
GTGGCTCTCCTCGGTTCTAACCTACTCTTGTCTCCAGAATAGACGCCCCC
CCCCGCTAATTAAATTCGAATAATTCAATATTTTATTACAGTGTAGATAG
ACCTTAAACTTGGTAAAATTTTCCTTTTTGTTAGTATTGGTTCTTATTTT
ACGTGTTAAATTTGTTAAAGTTTCGTTTTTGTTGTTATCAGTAAAGAAAT
TATGTCTTCAAATTAAACCCCCTGTTATTCCATCCCCCCCTGCTTACTAG
AATTTACAAAATTTTCTTACCCCCCTGCTTATTCGGACCCCGCCCGTCTT
TTCGGGAGACAAGAGTAGCGACATACAAGACTACCGACAAGACTCTGAAA
AAATTACACGATCCCATTATGATAACAAAGCCAAATTGTTGTGCTAAACT
ATAAATGATCGATTTTTTTAGCTATAACAAAGGAGCTGTAACATCGCCAA
TCAAATTCTAAAATGTGTTTGACTACCATTTTTAACCAGATAAACCCACT
GCTTCTCCCCCGCCGGGGTTTAGAACCCCATGGTAATTCAGAAATTCTTT
TACCATAGACATTGGAACAAGTATCGCCACAACTTTTATTCCTTGATGGG
GAAGAAGCATTTGTTGAATGGACCAAGACAGATTCAATCTATGGATCCAG
ATACATGGCTGCTTCAATGTCCAATGCTTCCCATTGGAATCCGAAATTAG
CTTTACACGAAATCAGTCAGTTAGATTCTATGGTAAGATGATTCGGAGTA
AAGGCTTTGGGGACACGAGAAGTTTTTGCGTTGGTGCAATGCAACATGCT
TCATCTCACCGACCTGAAACGCTTTCTCGTGTCTCTGCCCCATTTTTCTG
TTAATAGCATTTGTTCTTCTATCACCTTTGAAGAAGAAAAATTGATTCAA
ATCAAAATCAGCGTGTCTTTTGGGTATTTCCCTCACTTTTTGTTCCATCA
GGGTTTGAGACAAAAAAAGAAACCATGAGACACGCACTTTTTTCTTGTGT
TGGTGGGATGGAGTATATTACATTGCACCAACGCGAAAAAGCACTTCTCG
TGTCCCCAAGCCTTAAAGCCTTATATCTCTTATATAAAACACTAGATAGA
GCTACTCTATCTTTTCCAAGGCAAGACAGGTGAGGCAAAATAATGCGCCA
TTTTTGCCGAAAGTAGGTCACAGTAGAAACCCTAGTTTTCACTGTTGAAA
CTTTTTTTGACACTGCAATGACTTCAAACAAATCCTTCATGGTGTGTCAA
AGTTATTTAAGACTCCTGTACATTAGTAACTATGGCGAATGATTACGTCA
CTGCAATAAAGGGCCGCTCAAAGCGCAAATTTCATTTCATTTTTTTTTAT
TTTTTGTTGAAGGATGCTTTTGTGCTTCTCGATTTGCTTGGTGCAAAAGA
TCCGACCTTTTATAATTGGTTTCCAACCACGAGTCGATTGTATGAAAGTT
TGAAGAAGATAGGTAAGGGCCTTTTTTAAACGGAGCCGTTTATCAACCTT
AATTGTCGATCGTTTTAAGCAAGGCTTTATTTACACTTTATATAGTAAAA
GCCAATGGGATAGAATCGAATCTCTAACCTTTCTCAGGCAAAGAAAAGGT
GAAGCCTTAAAATATGCGCCGTATTTTTGACGACGGATTGAATATAGCAA
TTCTTTTGTTTTCGAGTGATATTTTTTTCGAAATTTAGCGGTAAATTCTA
GTGGTTATTTCTGCAGTAGCTGATACGATCTAGTCATGTGACCCATGAAA
ATATCTTTCGAGAAGGCCAAGCCTAGAGCATTAGTTGGATATATGATCAT
CAACTAAAGTGGCAATCACGTTGAAAATCGAGCATCAGTTGATTTTATGG
ACGGCAAGGAGACTAGTATTCTGTACAGAGTGTATCTTTTCGATTTTGTA
CCAGAGTGTATTTCTTCGTAGTACACTCTGTGCGCACCGTCTGTTTGATA
AAAAAATTCCCGCACAGAGACCTCTGCANCAACGCGAAAAAGCACTTCTC
GTGTCCCCAAGCCTTAAAGCCTTATATCTCTTATATAAAACACTAGATAG
AGCTACTCTATCTTTTCCAAGCCAAGACAGGTGAGGCAAAATAATGCGCC
ATTTTTGCCGAAAGTAGGTCACAGTAGAAACCCTAGTTTTCACTGTTGAA
ACTTTTTTTGACACTGCAATGACTTCAAACAAATCCTTCATGGTGTGTCA
AAGTTATTTAAGACTCCTGTACATTAGTAACTATGGCGAATGATTACGTC
ACTGCAATAAAGGGCCGCTCAAAGCGCAAATTTCATTTCATTTTTTTTTA
TTTTTTGTTGAAGGATGCTTTTGTGCTTCTCGATTTGCTTGGTGCAAAAG
ATCCGACCTTTTATAATTGGTTTCCAACCACGAGTCGATTGTATGAAAGT
TTGAAGAAGATAGGTAAGGGCCTTTTTTAAACGGAGCCGTTTATCAACCT
TAATTGTCGATCGTTTTAAGCAAGGCTTTATTTACACTTTATATAGTAAA
AGCCAATGGGCTAGAATCGAATCTCTAACCTTTCTCAGGCAAAGAAAAGG
TGAAGCCTTAAAATATGCACCGTATTTTTGACGACGGATCGAATATAGCA
ATTCTTTTGTTTTCGAGTGATATTTTTTTCGAAATTTAGCGGTAAATTCT
AGTGGTTATTTCTGCAGTAGCTGATACGATCTAGTCATGTGACCCATGAA
AATATCTTTCGAGAAGGCCAAGCCTAGAGCATTAGTTGGATATATGATCA
TCAACTAAAGTGGCAATCACGTTGAAAATCGAGCATCAGTTGATTTTATG
GACGGCAAGGAGACTAGTATTCTGTACAGAGTGTATCTTTTCGATTTTGT
ACCAGAGTGTATTTCTTCGTAGTACACTCTGTGCGCACTGTCTGTTTGAT
AAAAAAATTCCCGCACGGAGACCTCTGCAATGAAGTATAATTTATAAATA
GCAACACTTCTCTCGTCATTTCCCTTCTCTCACCAACACTCCATCGCAGT
GGTCAGTTTGAAAAATCTCAAAGACAATGACAACAGACCCTCTACGGCAA
TGAATTTTGAAATTAGCCGTAGATACTGGGTCTGTTTACAGACAAGGAGA
CTAGCGGTTGGATTACAGAATCTTCATGTTATTTATCTCGAAACTTCTTT
ATGTGTTTTTATATATTTTCCACAGAGAAGAACCTTCGAGCAGAGGGCCA
GTTATTTGGTGTGAATCACAAANAATTTCATTTCATTTTTTTTTATTTTT
TGTTGAAGGATGCTTTTGTGCTTCTCGATTTGCTTGGTGCAAAAGATCCG
ACCTTTTATAATTGGTTTCCAACCACGAGTCGATTGTATGAAAGTTTGAA
GAAGATAGGTAAGGGCCTTTTTTAAACGGAGCCGTTTATCAACCTTAATT
GTCGATCGTTTTAAGCAAGGCTTTATTTACACTTTATATAGTAAAAGCCA
ATGGGCTAGAATCGAATCTCTAACCTTTCTCAGGCAAAGAAAAGGTGAAG
CCTTAAAATATGCACCGTATTTTTGACGACGGATCGAATATAGCAATTCT
TTTGTTTTCGAGTGATATTTTTTTCGAAATTTAGCGGTAAATTCTAGTGG
TTATTTCTGCAGTAGCTGATACGATCTAGTCATGTGACCCATGAAAATAT
CTTTCGAGAAGGCCAAGCCTAGAGCATTAGTTGGATATATGATCATCAAC
TAAAGTGGCAATCACGTTGAAAATCGAGCATCAGTTGATTTTATGGACGG
CAAGGAGACTAGTATTCTGTACAGAGTGTATCTTTTCGATTTTGTACCAG
AGTGTATTTCTTCGTAGTACACTCTGTGCGCACTGTCTGTTTGATAAAAA
AATTCCCGCACGGAGACCTCTGCAATGAAGTATAATTTATAAATAGCAAC
ACTTCTCTCGTCATTTCCCTTCTCTCACCAACACTCCATCGCAGTGGTCA
GTTTGAAAAATCTCAAAGACAATGACAACAGACCCTCTACGGCAATGAAT
TTTGAAATTAGCCGTAGATACTGGGTCTGTTTACAGACAAGGAGACTAGC
GGTTGGATTACAGAATCTTCATGTTATTTATCTCGAAACTTCTTTATGTG
TTTTTATATATTTTCCACAGAGAAGAACCTTCGAGCAGAGGGCCAGTTAT
TTGGTGTGAATCACAAACATTACTCTGGTCACTACTTCACTGGCCAACGG
CCTGAAGATATCGGAATCTATGGCAAGATTGATGATGACCATGTCCCGTT
TATGCAAAAAGGTTTGTTTGTCATCTTTATTGCCTACTTACTACTTTATA
CAAAATTAACTGGCCATTAATATGAAGTGACTAAGTGATATCGCTAGAGG
TACAAGGCTATATGAAAGAAAAAAAAAAGATTTTTCATACATAAAATTGA
TTTAAAAAAACATAAGCTATGATTGTTTAGAGTTAAAATAGTTTAAAATA
GTGCCTCCACTGAACATACCGGTTTCATGCATCAAAACAACCAAAGAACA
AAGAATCGCTTGGTTCGTTCAGAAGTGAAGTTAGGCTTTCATCACCATAT
AATAAAAGCCGACAAAATTTAGAGGGATCGAGTGGGAAAGAATTTATGTC
TAAGGTATATGAAGCTTGTTGAACAGTTGACTGTCTTTCATAGGAGTATA
TACTCACGGTTTTAAACATAATCGTATAAAGGCCGGTCTCCACTTTCGCG
CAACATGAGCGAAAACTTTTCGACGTTTTTGTAAGGTCATTGGTCGGTTG
AAAAATGAAGCAATTCCATTGGTCAAAATTGACGTAACGGTTGAAAACAG
TTGAACTTCCTTCGACTTTTTTTTTGTTCGTGCGAAACTTTTTTATAACG
TAATCTTTTTTTTTGGCCAAAAAGGTTGAGAAAAAAACTGTCGCCCATTT
CGCGCGAAAGTGGATACCGGCCTTAACCAAATTTGAGCTATGGTAATTTT
CATAAAATTGGCTACGATAACTCAGGTACAACATTGTGTTACAAGAGTGC
ATCTATACGTTTTTTATAAGATTTTTTAATATTTTTGAAGCTTTCGGATG
TTCTTAAATTTTTTGAGTTTTAAAGCCTAAAAATGTCCATAGCATTAGGG
TATTTCGCGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
GGGGGGGGGGGGTATTTTTGTGCAGTTTCTTAAGAAATTGGGTGTGCACT
CTAAGCACAAAGGCTTTAAAATGTTCTTATTTTTGTCTCAATATTTCGAC
CATGGAAGCCTTAAGTTTATATAGTTTGTGTATTTATAAACGTGTATGGG
TGGTCAAAGTAATCAAGGCTATTGCATTATCGTGACAGAAAACATCGGTA
GAAAGCTTAGAAGGGGAAAATTCTCGCGTATTCCAATTCGTTAAACTTGC
CCTTTGAAATTTTTCCACAAAAGTTTTCGTTAATTTACTTAAAGGGACAT
AAAAGTTTTATTTTCCTTTAATTGAGCGCTCTCCTTGAGCTGGAAATGGA
CTAATTTCTACCCTTCCCCTCTTTCCCAACTCCCAAATATATTATTCTCT
CTTCTCTAAACCGNTTAAAGGGACATAAAAGTTTTATTTTCCTTTAATTG
AGCGCTCTCCTTGAGCTGGAAATGGACTAATTTCTACCCTTCCCCTCTTT
CCCAACTCCCAAATATATTATTCTCTCTTCTTCTACAATTATTATATTTA
AAAGTTTTACCAGACCCCCTCTATCGGCTTTATTTTTCAAATCGGTTTTA
TCTTTAGGAAAATCATCCGGCTTGATTTTCAGTATATCTCAGTTATCCAA
TAATTTTTCCATATAATAGTATAACCGAAACTGAGAAAATCTGAGCTTGC
CCTTTCCTCTCTTTGTTTGTGGTTCCTTTTTCTATTTTCCAATGAAAAAG
GAAGGAAAATTTTTTGGGGTTTTTAATTAGTCGGCGGAAGAAATTTTGTC
ACCCAAAAAGACGTATTTCGTCTTTTTTCCCGAAAAAATNGGAAAATTTT
TTGGGGTTTTTAATTAGTCGGCGGAAGAAATTTTTCCCGAAAAAAATTCA
ACTTCTTACATTTTTCCCCGATAAGAATGACTTCGCCAAAGAATTTTTTA
GAATGCAAATTAGAATGCAAAGCAACTCCAGCCGTAAGTCCCAAAATTCG
GGTTATTTTTTTAAAACAATGTATAGTGATAGACATCGTACAACCGTGTC
GAGATTTGAGAACTCACTCGCTTCGGGTTCCTGATTCAGTCGTAGACTTT
GTCATGGCGCAAAACAACAAGCACTCCTTTTACATGAAGGATTAGAGGGG
CGCATCCCTCTTCATTGATACATGATATAAACAAGGGTCTTACAAGACTG
AAAGATTGACATAGGGTTGAAATTCTTTCAAGTTAAGTGAATTGCCAACC
TCGTCCCCATGACGATTTGCTTTTTTACATAGGATCGCGCAAATTGATTA
TCAAAAGCTTTCTGCGAAAGTTTCACTTACCAAAAATTCCGTTACAGCCC
CCCTCCTTTAATACACTCATTTTGCATACGGTAAATTTCGGCTGAAGTTC
ACTATGCTTAAGTAAAGCTCAATTTTTAGCCTCGACTATGCTTAACCCTT
AAGATTTTTCGCGCATTTTCCCGCTCTCTTTAATCTTGAGAGAAGAGAAA
TGAACACATTCTATTGTTTTCGAATGTTTACCATATGATTTATGATTCTT
TCTTCTGTTATTTTCTGAAGTTTTGGAAATTATGATTCTAAAAATTTCTT
TGGCTGAGCCTCAAGGTATGCTTAGCATATGCTTAATTTTTCTGGAAATT
TGAGCTTCAGTTTGCTTATAAACGTTATGCTTATAAAACAAAATGAGTGT
ATGACAGGAAAAATTTAGCTGAAACCGGTAATTTGGGGTGTCAGGGTCAA
AGGTGAATATCCGGAGGATGATACCCGTTATTTCGAGGAAGGGCAACCTA
ACCCTTTTTTAATTTTTTTTTCTAGAAAGGTTTATTTTATAGTATTATGT
TTTATTTGACAGGTGTTCCCATCCTACACATCATCCCCTACCCGTTCCCC
TCCACGTGGCACACACTCAATGATGATGAAGAACATCTCGATCCAACCAC
CATTGAAGATCTTCTCAAAATATTTCGCCATTTCATTTTCTCCTATTTCT
CACTTGAATGAATGGATTGAACGAATGAATGAATATAAACTCACCTGGCA
CGCGATGTTGTTTTGGTGTTCGTCTAACGTCCACGCCCATCTACATAACG
TAATATAAATGTTCGATGAACGTACTGTTCAAAAGTTGTGTTGGTTTCTT
CCTTTTCCCCGGTGAGTGAATATTGAGTTTGGAATATTATTAAATGAAAC
GAAATTTGGGATTTTTAACTAGTATTTATAGTGAATTTGATTTTGGATGG
TCTACAAAAGCACACTAAACTAGAAAATGTATCAAAAATGGAAATGATAA
CTCTGCGACAAGGAAATTACCAAAACAACGAAATCCTTATTAACATACGT
TAGTTAAACGTTTAAATAACATTCAAGTGATCTGTGCCTTTTGTGGATTA
TTCAAAATCATGGCAGACTGTCATTTTGAATTATTGTCATATCTAAAATA
AACTGTGATGTACAGTTGGAGTCTCAATATAAATCGAACGTCTATGGAAA
AGTATATTTATTGTTCGAATTGTAGAGACTCCACTGTCAAAGGTTTTGTT
TCCATCATAAGCAACTAGCCCCAAACACCACCAACAGTCAATCATTATAA
GTGCTTGTGGGCTAAACTCTGTAAGTTTTTCATATGACAATCTTTCATTT
TTAAATAATGTAAATTCCTAAAAGAAACAATTATAATTTATTAGCACTTA
AAAAATGATATCTAAGATATTTATTCAATGTAACTGTGATAAATGACTCG
GTTTTTAACATGAAATCAAGTCGATTTTTAATGTGCCGGTTGTTTTTTTT
ATTACAATTTCGTTTTCTGGGCTGCACATATGCCTCTAAAATTTAGAGAT
TTTTTATACTCTTTTGTTTAACATATAAAAGAAATAGTGTTAGACTAAAA
TACTTACCTAAAAGCTGTTTGTCTGTCTGACAGTAAGACAAAGAAGATGT
TTCAATTTAAAAGAAATTTGATTTGATATAACTTGGAGAAAGGTATCCCA
GAGCTGATTTTTACTTATCATTTTCAGAAATAATATGAAATTTTCTTCCT
CAAATTTTATTAGTTTCAATGGTTCACTTATGCATGATATTTATGATGAC
GTAATATTTTATACGGAAGCACAAAAATATAGCCTGGCACTAGTTTTATT
GTTTAAATCAAAAATCAGTGACAAACACACGGTATTTTTTTGGGTGTTTC
CCTATTAAACATTACGTCATGAATATCACGAATACGGTACTTATGTCTTG
CACACTTTTTTGGATACCATATAAAAAAGAAGTGCATCTAAATTTATTAT
CAGATATTCCGATGGTGGATTGGTGGCCGCCCAATATAAAGCTCTGAAGG
AGCGGGCCATTTTCCCATCGGAGAGGAACGATAGTCGGCCTTTGATGTGC
CGCATCTCCAGTCAGGTTCAACTTCTTTCGCACGTAAACCTAAAAATATT
TTGGTTGGACTCGCCAATCCCCGAATACGAGGGCTGGGTTACCACATACC
AGGCCTCCCACTGCAAAATCCTATATGCGGACTTGCAAAATTCCGTAATC
TAAACATACCGGATGTTGAAATTTTACCCGACCATCAAAGCTTTAGCGTG
CCGGATGAAAATTTCTGCATGTGGTTGCCTGATAACATTAGGTTAATTTT
CCGTATTTTGAAATTATATGCATTTTAAAGGGATATTCTATTATTAGTGA
CAAGAATAATGATATTGTTAAAAAAAATATAAAATATATTCTATAAGTAA
ATACTCGAATTGGA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_035800	XLOC_035800	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_283	supercontig	scaffold_283:105680..122743 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.53606	6.39036	2.79569	2.30328	6.19771	4.38541	9.15359	9.36113	5.03749	5.32413	4.50942	4.43025	3.13305	2.51321	2.87792	3.88036	1.90236	3.22476	3.66486	6.14376	7.13052	8.89403	7.97171	8.43477	9.59248	11.8602	2.67291	2.49966	11.9358	13.5876

Blast

[Close]

BLAST of TCONS_00056835 vs. Swiss-Prot (Human)
Match: QPCT (Glutaminyl-peptide cyclotransferase OS=Homo sapiens GN=QPCT PE=1 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 5.510e-77
Identity = 138/334 (41.32%), Postives = 200/334 (59.88%), Query Frame = 3

Query:  171 QKRLHKLKEYSQKATKRLAALSDYSNFYNKYLTEILRSRVPGTVGHARVKNFIIRKLQ--EYNWDVKTQNFTMWTPLGPKNFTNIIGTLNPRADRVLALAAHYDSKILPVVNGKFFTAATDSAVPCAMLLDFARDLSDKA---KEITSTLEQVSPQLLFLDGEEAFVEWTKTDSIYGSRYMAASMSNASHWNPKLALHEISQLDSMDAFVLLDLLGAKDPTFYNWFPTTSRLYESLKKIEKNLRAEGQLFGVNHKHYSGHYFTGQRPEDIGIYGKIDDDHVPFMQKGVPILHIIPYPFPSTWHTLNDDEEHLDPTTIEDLLKIFRHFIFSYFSL 1157
            +K  H+    +  A +++A  +  S  +   L  +L  R PG+ G    +  I++++Q  + +W ++   F   TP G ++F+NII TLNP A R L LA HYDSK     N + F  ATDSAVPCAM+L+ AR L  K    K ++ +   +S QL+F DGEEAF+ W+  DS+YGSR++AA M++  H  P  A    SQL  MD  VLLDL+GA +PTF N+FP ++R +E L+ IE  L   G L          H   G+  ++    G I DDH+PF+++GVP+LH+IP PFP  WHT++D+EE+LD +TI++L KI + F+  Y  L
Sbjct:   39 EKNYHQPAILNSSALRQIAEGTSISEMWQNDLQPLLIERYPGSPGSYAARQHIMQRIQRLQADWVLEIDTFLSQTPYGYRSFSNIISTLNPTAKRHLVLACHYDSKYFSHWNNRVFVGATDSAVPCAMMLELARALDKKLLSLKTVSDSKPDLSLQLIFFDGEEAFLHWSPQDSLYGSRHLAAKMASTPH--PPGA-RGTSQLHGMDLLVLLDLIGAPNPTFPNFFPNSARWFERLQAIEHELHELGLL--------KDHSLEGRYFQNYSYGGVIQDDHIPFLRRGVPVLHLIPSPFPEVWHTMDDNEENLDESTIDNLNKILQVFVLEYLHL 361

The following BLAST results are available for this feature:

BLAST of TCONS_00056835 vs. Swiss-Prot (Human)

BLAST of TCONS_00056835 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
QPCT	5.510e-77	41.32	Glutaminyl-peptide cyclotransferase OS=Homo sapien...	[more]

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TCONS_00056835 (transcript) - C. hemisphaerica