TCONS_00056885 (transcript) - C. hemisphaerica

Overview
NameTCONS_00056885
Unique NameTCONS_00056885
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length505

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00056885 ID=TCONS_00056885|Name=TCONS_00056885|organism=Clytia hemisphaerica|type=transcript|length=505bp
TATGGCGTGTTTTCCCGCGAAATTTTGACTCGATTTATTTCtcagaaaat
gaaagtgacgcATGTGCGCGAAAatgaaattcaagatggcggcgatAAAA
ACAGAACCTGAGGAGTTTGAGGAACCGAATTTGAAACGTCTTCATGGTTT
GGTTGACAATACATATGATAGTGATGATGAAGATATCAAAGAAATCAAGC
CCAAGATAGAGAAGATTGATTACAGTGAGAAAAGCAGGCATTGTCCATAT
CTTGATACAATCAACAGaactgttttggattttgattttgagaaacTCTG
CTGTGTTTCTCTGTCTCATCTCAATGTTTATGCATGTCTTGTTTGTGGAA
AATACTTTCAAGGAAGAGGTCAGAATTCTCATGCTTATACACACAGTGTT
CATATTGGACATCATGTTTATTTAAATTTACACACATTGAAGTTTTACTG
TTTACCGGATAATTACGAAATTATTGATTCATCCCTGGAAGAtataaagg
tttgt
Run BLAST on NCBI

protein sequence of TCONS_00056885-protein

>TCONS_00056885-protein ID=TCONS_00056885-protein|Name=TCONS_00056885-protein|organism=Clytia hemisphaerica|type=polypeptide|length=148bp
MCAKMKFKMAAIKTEPEEFEEPNLKRLHGLVDNTYDSDDEDIKEIKPKIE
KIDYSEKSRHCPYLDTINRTVLDFDFEKLCCVSLSHLNVYACLVCGKYFQ
GRGQNSHAYTHSVHIGHHVYLNLHTLKFYCLPDNYEIIDSSLEDIKVC
Run BLAST on NCBI

transcript from alignment at scaffold_284:1093845..1114928+

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00056885 ID=TCONS_00056885|Name=TCONS_00056885|organism=Clytia hemisphaerica|type=transcript|length=21084bp|location=Sequence derived from alignment at scaffold_284:1093845..1114928+ (Clytia hemisphaerica)
TATGGCGTGTTTTCCCGCGAAATTTTGACTCGATTTATTTCtcagaaaat
gaaagtgacgcATGTGCGCGAAAatgaaattcaagatggcggcgatAAAA
ACAGAACCTGAGGAGTTTGAGGAACCGAATTTGAAACGTCTTCATGGTTT
GGTTGACAATACATATGATAGTGATGATGAAGATATCAAAGAAATCAAGC
CCAAGATAGAGAGTAAGTTGTGTTTTTGtgcgaattcttttcaaatccAA
AATGAACTGCAATTTTAACCAACGTTCTAAAAGCTAATAGTATAATTTTT
ACTTAACAgttaccgtgagatcgggtaacttgcatcggtggaggctaaca
tgcatagccctcaaatgaatgacctctctggtcattaaaatacaactatg
cagctccgctcgcagctctactctaccatttttgttttgatttaactNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNagaacagagtaatcaaactcgttagaaaaagtacc
attagaagtcataaaaaatcaacctgaataaatgcaatcgaaattccaga
gaacttaataattccccaaacaacatatTACTAccatgtcaaactcccat
cgcATAAAtcttacaattacgtcagagtagactacgctcgccaccgaaga
ggtttatttggaaagggtaattatattttattgttcgcttcttttttaaa
gattcgccgggttgaaaaagtttatgaatttctttgtacatattttactt
accccaaatatttaggaggctgagttttaaacgaatcgtcaagttgaaac
aaacgaacgataaatgtatcaaggtctgttttatttaccccctggtgact
taacaaaagagacttaactcgatgttacaatccaattattaaAAGTTTGT
Cttggcctttttataatgagcgagacatacgttctctgattacgcaattt
tcatattgacattttcgaggcatttttaTGTAActgcttaaaaaagcaaa
aaagacatattgccagacggtgtcaatcgaacgaatcgaaagccgaatca
attgaatgcaattgaacacaatcgaataattgcaattcgattgtcgaacg
caatcgaatcgcaatcaaatattacctagGATTTGCcattcgattgcttc
gattacgttcgattgatttagattttattcgcttttgtACGATACTTTAG
CGCTCGGccgtccacgctaaaaagctctaacggagtgatccaatttaatt
tacagtcaggcacatcctggcaaatgaacggggtgagcatttgcatgggg
tattcgtcacccagtgtaaatgagataggacgtctcaggctaaaagtgtN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNaatcttcgaagacaaaattgacccatggaaaaaaaatttcat
ctatgcagttctttgaaatgaagcaaaatatttccaacccggttcaattg
cgtggggtattcacttttgttttcgaccccttgcatttgccaccaatcgc
aagcgaaaaataccccgttcgtTTGCCAGGATGTGTCTGACtgatttaat
cgcaatcaaactcatcaaacgttatcgtaatcgaacgaaaaATCGAATAT
TAATCAattgtaattgacaatcaatggaaccaatggaacatagtcaacta
ttaatcgaaccaatctaaccttacttgGCTTACTCAAAaagcaatcgaac
acaatcgaatattacccaggaattggccgttcgattgagattcgattacg
ttcgacaatcgaatctcaattattcgatcgtgttcgattacgttcgattg
gttcgattgcgatttttgttcgaagttgtctgattgacaccgtctgggta
TTGCtattaggggtcactcacatatcgattcttcccacgatTAACTGAAA
AACCCCTACCCCCACCTCTTAACGtcaaagtttttaaattgtcaAAAGTT
GTtgaaactttaaattttctccttcacttcCATCGTTGCTTTGATTTGTC
AGCCATCTTTTATTTTGCTACGGCTTGATGCTCAgcttacatttaaaaaa
taatggagataaggcgaaaataaaaaaatgtagtgtttccggaaaccggt
caggtgaaaaaaataatttttctgacCCGACCGCAGACTATGCgttcatc
tatatggttcatcataaagaaaatcaagttggccgttcaagctatcaaac
gtcgtttgattagatattcccgcttgtaaatcaagttttgttcgttagta
gttgatacattaaacatagtcgtctaagaaaacagctattttttttagaa
tcttccttacaatctagtttttatatatacttataaaaaagttCACGCTT
TCCCTCATACTctccaagcgtggttagctcaagcggttagagcgtctgtc
tcataagcatgggtttccgagttcgatcccgatgggtgtcaaatttttca
attcttcaaatttcttttttaaaattctctttctattataatgaaggtca
atcaaacaagtaactagcatatattacctccgctctctgtgtaaggttta
gataagctatgatagcatcacttaataagaacttttttaagttttttttt
cttcaatcttttttttaccacaagcgattattcaaggctgagatatagaa
gaacgggtATAGGTGTTTGCGCCTGTGTTTGCtgactgacagtttcagtt
tcactttcactttcagccagcgagtgagcgagcgattctttgtaagagaa
tcgtcaaataacttctttcagaatcattgaacttctcgttttatacttta
aaggcagaatgataattgatttccgagtcaaaatgtttgacacttgatcc
aatcgtttgcttatctttcttgcgtagtcgttatttgaatttcggtattc
aatgcttataaagtacggttgttataagggtattaaactcctcactagga
gggaacagatcataaattcaaattgaacgcgtaattactaatagcaatta
acattacataacgcgTTGATATCTCTTCACTCTCATGAAAATgtgattca
aaattaaagtgatgagcacaaaaacaaaatcaagaattggaaaattggaC
ATCTATTgggatcgaactcggaaacccatgcttatgagacagacgctcta
accgcttgagctaaccacgcttggagAGTGTGAGGGAAAGCGTGAactta
taagaaagaaaaaggaaagaaagaaacgagaagaaaattagttctcgctt
tgatgttattatcaaaacaaaaggatcagtcatgtTGACATTCATtttca
cacgtcagcaatctagtttttataaatataaaaactagattgtaaggaag
attctaaaaaaaaataacagttttcttagacgactacgttattagtattc
agggcttacttcatactgtttgtacataaaatttatctttaaagttctat
ttcaatgatcaagagttatcaaaaatagcaaaaaaattattttctgacca
tgcgcatgagagcttttttccttcacccgcattccggaaacactacattt
tatTACTTTCGcttaatttctaaacttttttcggaAAGTTGCTGGGATTG
ATTATCTCCGTAATGTAATCATGTGATCAACAGAATAGCAGGATTTCAAA
AAGGAAAGACCATCTGCAAAATTCAAGTGCACCACGCGGACcgtctaaac
aaaaggaacacgAGAAATAAACATCgagccgtttgttttggttaaaattg
ttCTATAATAAAATAGTGTTCCATACCATGTTGATTGCCCGTACTATGTT
GACTGAAACGGCCGATTGTACCATGTTGACGGTTTACGTACCAAGTTGAC
GGGTGCCGATTTTTATCCACAGCTCGCTCATATTGACTTGTGATAACTAC
AGTAATTTGGTTTCCCAAGTGATACAGTCAACTTGGTATGAACAAAAACG
TTGTACCATGTTGACCTGAGATTACTAAGTTAGCTCatatgtgacacagt
caacttggTATGGTCAAAAACGCTGTATCATATTGACCTGGGATGACTaa
gttggcttatatgtgacacagtcaactcGGTATGAGCAAAAACGCTGTAC
CATGTTAAACTAAGTGACTAGATTGGCTTATTtgtgacacagtcaacttg
gTTTGAACCTAATATCCGAAGGATGATCAAAATACCTAAGAAGATCGtga
cacaaaaatattttgtccaagAAACCTGAACTTTTCTAAGACAATGCCAC
CACACATGTCATAGAGAATCCCAAAAGCTCTATTCAATCTAAAGATTAAT
ATTAACCCCCTTCAAAATATTAGCCGTATCATGTTGATCGAAAGTATACC
AAGTTGACCGAAGAAGATTTTTATCGAAAACAGTCAACTTGATACGGCAA
AACGCACGGGATGAAACAAATAGCGAAGCAAACGGATTTGTCACGgaata
aacgtctcaaaaatcgatatttctggtgaaatttcttagctTCACAGACT
CTAACCCCTTCCACCCCTTcccgtcaatttgacgttagtcttgggaaaaa
tcgatatgtgagtgaccccttagcTTAATTGCAAgcaaaattgctaaaaa
gatGCTCGCCTTTGCTGAAGACCTTTAATATTCCAAGGCAATAAAGATAT
TTtgttatcaaaggcaaaaatCATAACTTCTACGTTAGGCCTGGGTCACC
AATAAGTAACCTTTACGTCATTTCCAGCCCCAAAATGTGAGTCAGTTGGT
CGGTCGGCATCTTAAATCATCAGAAAAATGTGCTCTGAATATAGGCGGTC
TGGCAGTGCTAAAATCATCGGGAAAAATGCACTCAAGCATAGGTTTGTTC
AGGCAACAAGAATCATTAAGCGCGTGAGCTGCAATGTGATCATTTTACAT
ATTGTGATCGCACAAAAAGCAGTTGCGTAGCGCTTTTTAAcgcaaaaaat
ctttgaaaaattgcagataaaaatcttaaaaacactcGATGATCAAAACG
CTGGCTACGCTGAATCtacaaaattctttgaataGTATTactaaaaaatc
cgacaaattttctgactttccgACTAGACAACGGTCAgatttttaagata
gaaagCACCTTGAGTCAGTCGGAGGACAGGAACACAACTCATTTGTGACC
GCGGCCTTATTCCCAAgcaattaaaaattacaaactttttctctttgttt
ggaacgctttattttatcaaaacaatcagaaaTGATAAAATTGTCGTTTT
TTGGACAGGGAAAGTACTTGAATCTGATTAGATGCGATAAAACAAGCCGC
AGCGAAAGTTGCAATCAGGCGTTTGTATAAGTTCAGACGTAATTAATCAA
ACAGCCAGTTTTAGTTTTagacaaaaaaatgcctaaTCTCGCAAACTCta
cgtaaaaatacaaaaatgagaaGGTTTAATAGCTaagataaagatataaa
aaattagaataaataggtaatttatacaattttaaattagatttgttaga
ttaaaattcataaaaatttaaaaaagttcaaaaatagtacAGTAATAAAA
AGTGTGTTATAAATAGTACACTAATAGGGGACGCACAATTAGCAGGGTCA
CATGAGAATGGTGTTCAAAGCAGAAGGAGAGCACATACTAGAATTGAGTT
GAACAAGAGTCCAGCTGGTCGCTAGAGGATAATgtagcaaaaaaaaacac
aagtaTGAGCATAGACTCAGTGGAAAAACGGGCACAGATTTAAGTGTACC
CTAGAATACTAAGCTATCAATAGAATTTTTGAATTCTCTTTCAGTTTTCA
CATTTGCAGTTCTAATTGGTAATTTGTTCCATACTTTGACGGTAGATGGA
AAGAATGAGTTTGAATAGCATTTAATCCTGCCCTGAATGGGCTGATATTT
CACATTTGTACAACGCTGTTTAGCTGGGTGGATGCTGCTGTCAACGAATT
TGTTTCCtgacaaaatatcaaataacattttcaatttcggTTTGGATCTC
CTTGTTTCCAGTGTTTCAAgtttaagtgatttttttaGATTGTTTGGGCT
GACTTCTGAACTCCATTCTCTACAGATCCAGCGGATAGATTTTCTCTGAA
TCATTTCAATTTTCTGGGTAAGGGATTGGTTATCAGTGGGATCCCATACA
GTGTTGGCATATTCCACCGTTGGTCTGATAAAAGTTTTATAACACTTCAG
ACTGTTTCTTTGTCTGCCATTGATAGGTTCCTCTGAAAGAATATTCGGGT
GTTATTTGCTTTGGAAGTTGCAAGATCGATGTGATTCTTCAAACAGAGAT
TATTCGAGATTACGACACCGAGATATTTAGCTTTGTTAACAGTTTTGAGC
TGTTGACCATGGATTTCTTAGGTTTTATCATGAATTTTTCGTTTGTTGGC
AACTCTGAGGTTAAACCATTTGTCTGGGTGAAACTCCATGGACCATTTGT
TTTCCCATTTTACCATTTCGTCTAGGTTTTTTTGAAGCTTTTCGCAGTCT
TCCTGTGTGTGTATTGAGCGGTAAAGATATGCATCATCGGCAAGGCATCG
AGGACAGTTCCTTGGGGGACACCTGAAATGACGTTTGAGTTTTTGGAGGA
TTTCCCACAAACAACAACACATTGGGTGCGATGCAGTGCGATGAGATAGA
AAGTCTGTAACCCAAGTTAGGACGTTGCCATGTACTCCATAATGTTTAAG
TTTAATAATCAGTTTACGATGGCATACCTTATCGAAGGCTATACTGAAAT
CAAGTAAAATACTGTCAACTTGTTCTTTCTTGTTGATAGCTCTAGCAAGG
GTATCAATGGTTTGAAGCAATTGGGTCTTGCACGATCTTTTCTTGCGAAA
GCCATGTTGAGTATCTGTAAGACAGCTGTTCTCCTCGAGGTGGTTGATGA
TGTGGCTATGAACGATGTGTTCTAGAACTTTGCAGGTGACAAGACGTCAA
GCTAATCGGTCGATAATTTTCTGCTTTGGACCTATTTTTGTTTCCTCCTT
TGAAGATTGGACTGACTACAGCATGTTTCCAATCACTGGGTGTTTCCCTT
GCTTTAATGATGCATTGAATAATAGGGTGAGACCGTCAGCAACTTGGTCA
GCTGATTCCTTTAGAATACGGGCTCCGATTCCGTCAGGACCACTAGCTTT
AAAGGGATTCAATTCTTTAAGTAGTTTTATGACTCCGTTTTCGGTAACAA
TGATGTCATTGATCTTTTTTCCTTTAGGGCCTAACGGTGTTGGGGTTGTA
CCATTATCTTCTGTGAAGACACTTGTGAATTGGTTGCCAGATTACTGAAC
CAATCGGTACTTAATCAAACGACAAAAGTTCaattaaattatttatttaa
atgaacttttcaaaagtctctaaaattgtgagtattcaatTAAGTTGGAC
AAcaagaaatgtttgacaaatttgacaaaaagcTCTGTTCGACAaagttt
gacaacaagaaatgtttgaaaaatttgacaaaaaactaCGTTTGACAAAG
TTTGATAGTAAGAAAAGTTTGACAAATTTAGCAAATAGTCCTTTCGATTA
CGTAATCTTATTTCAAGGATCAATCAAAACTCAGAGCGCCGATCTTTTTT
GCAGCCACTCTCAGAGGCCTGGAAGGGTTTTCTTAAATTATTGTACAATT
AAACTCGATAAAGTTCGATCAtgtaattttatattttgaagaatttgtga
GTATTCAATTAAAGTTTGACAGCCGAACTTAGTCAAACATTAATTGGACA
ACAAatttcgattaagttcgacaaagttaaattaaaaatatcgtttgttt
gtttgtccgTTTGCTTTTATTATACACCAATCCACTCGATTTAGACTTAG
AATCGACAGAGATTAACAGTTAGGGaagccatccaggatcctgccattct
atcagccagcaaaaactaaatgacatgCTTGTAAACTAAAGTTTCTAACC
ATTTTCtggcaaatgtggcaaaatttgagtgccataaataccaaataaaa
aagatgtggtgaatctggcgttcttggcatttttggaactcaCCTCCATG
GAGTTTgctccatacaaaacactgttctcacgagacctgtgttcttttcg
ctccaattttgccacttttgccaatgattttgaaaaatagaagaccctcc
aatgctaaagcaaaacaatgccgatcggcaatttgattggttaaaaaaac
cGCCCGGGCGTATAAACACTTCGCGCTCTACAAACGCCAACAGAAAACTG
CTGACGAAGCATCAGCATCGGCgtagcgatgtacaaatttgccatgaagc
tatgatcttttgacattaaaattgtggatttggcaaagttggtgagtatg
gcaaattttgaagtcaatcgaattggctgaaACAAAGATGGCAGTTGTCG
TAAACCTAGACGACCCTCCCcctgaaaatccatatttcctTGGTTTTATT
CCTAGATAAGTCTCCCCATGCCAATAAACCCAACCCAAAGTTATGTAATA
CtccaaatcaaaattgatgatgtaGCTTTATTAAGAAATAATTGCTGTCA
TCATTTTCACGTATAAGATTACTATAGTCACCATTCCCCTATATCTTTAT
GTAGCCTTTTGTATTAAAGTCAAATTATAGAACAATAATCGTTATTATCA
TCATTATTCATTGAATCGTATAAATACGCTTTATATCGTTTATTAACTGA
CTTACTTACTCACTTACTTTTGGGTATTACTTTTGCATCTTAAACATGTA
AGTGTTTATCTATATTTTATTAGGGATCACCCTTAGGGTGGTCCCGATCC
TTCTGGAAGTACACTTAAATTCAGAATATTATTCGTATTTAGCACTCAGA
ATTTCTCCATTTCCTGTTTGAACGTTTGAACTTTTATTTCTAACTAGTTC
TGTGCAATTCATAGTGTTCGATTGAATCTCCCTTTTCTGCGTCCCTTAGT
TACTCTGTTTGGAAATCCTAGTTGATCAAGAAATCCTTCAATTTGTTTAA
GGAAAGTAAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTACATA
ACTTGGAGTAGTATGTCCTTAAGACAGTGCTCATTTCCTACAGTTCGTTC
GTAATTCCGATCATCTAAGACATAAGAAAGCGGTGTGGACCTTCAACAtg
gaggttctaccgagatgTGTTTGTTGCGGTTCACGCTGCTTTAGATGTTC
CCTTCCGTCCTTCCCTTCCCTTATGAATTATTATTTATTACTTATTTATT
TCTGATTATTATGATTTACTTATCACCCAGTTTCCGTCCCAAATTCCGTC
CCAATTCCGTCCCGTCCCGACATCTTTCAAATTATTCTTTATTTCATTAg
ttatattattattttttgattgcTTATAGTGTTTCCGCTTCCTGTTTGGT
AACTCTCACTTATCTTGTCATAAGTGATTGAGAATGTCATATTCAGTGTC
CTTGTTAAAGTTGACGGCTGATAGTGATATGTGTCCTGTCCTTATATCCT
GTCTGAttaattattttattaaacGAACACATTCTCACTTATTCCTTACA
CCTTCGTTATATCATTTATTAACATCTAACCCCGTTTGATTTTCGACATC
AGTACAACTGATGCTCTTCCCATTATGGAGAAGATTTGATCACCCTTCCC
CTAATTGTGGCATTCTGTTATTACACATACACCATACCTATATACTATTT
TTGGTACTGTGATTTATTTTGTACATATTAGTTGAGTAGCCCatcaagat
tataaaaatgatgAGGCATAAACTCCTCCCTgtagtatttaaaaaaaaaa
aaaaaccactaGGATTATCACAACATTCTTGCGAATTATCGTTATAAGTT
GTTGAAAGATTATAGAATGATATGTGATGTCCTCCCGAAAAAGATTACCA
AAATAGATTAAAAATATGATTTGAGCTTCTAAAATAAATCCGGATAAAGT
GCATAAACGAAAATGTTTGTTAAAAAAGTGTCAGATGTATGTACTGAGTG
CGTAACCACTCAGCGATGATTCTTTTCCAGTGCGTAACCACTGATGATTA
ATGAGGCCTTTAAGTCCACGAAGTATGCAGTTAGAGTTTGACATCTGAGG
GAAAGTGTCACTCCTTTGAATTTTAAGTGTCTTAAGCCGTCCTAAGAAGC
GCTATATTAAGTTATTCCCGTGGCAAGATAGAGTAAAAGAGTGCGTAACC
ACTCGTAGAAAACTGTCGGTAAGACAGTAGGAAACTGTTAGAGTAAACAG
TTGAAATGTTTCCCTCCTTCCTCCTTCCCCCTTCCATGACGCTTTAAGGT
AAGGGCCCCAAGTATCTTGAGTCGAATGAGAGGTGGATGGTAGTTTTGCA
GGACAGGCAAGAGAAAAAGACACTGTTGATTCCGGTTTAACCATTTTGTT
TACAGAAAAGACGTACATCAAGAGAACACATGCCAGATCAAGACAAATTA
GCAAGAGCGCAAGCAAACGCCCTTGGAGTTATCCGTGCACATTTAGAAAA
CGAATCAagctcaaaaacacaaagaagtCAGGTAGATATTGGAGAAGAAA
AAGAATTCTCATTAGAAGACCCTCAGAGAATAGGCGAATCCCCATTAGAA
GAGGTCTCTATTAGACAAGAAGACCTTCTAGAAGCCAGAAACCCCCCATA
TGAAGAGGTCTCTACAGGGGTAGAAGACCCTCATAGAAAAAGGCAAAATC
TTATATTAAAGGACTTAGATATACTTAAAGAACGTACTGATTGTTTTGTA
ACTGAACAAAAGAAAtacattaaaacattaaaactcATAACGAATGCGTT
AGAAGAATTACTCTTGCATGAGAGTTTAGAAACGAGTGTTGACTTAAGAA
ACTCAAGAATTGACGTACTAGAGACTCTTGAAAAAACCGAAATCAATCAA
GCGCGCGAAATATTGATAGAGGTCGATTTAATTCAAGGTCAAATTAACTC
TCAAGAAAAAATTTTACAAGATTTGATAAACACCACTCGAGCTAGacctt
ttttcgagttagcaTACGAATTGAAATACATTGAAAATACCTTTTTCGGC
ACCAGCGAAAAGTTTGACAATTTAGTAAAAGAAATAAAGGAAACCCATTC
TACCCTGCGAAAGAGGATAGAAAACCAACGAGCACGAATCTCTGGTAGCC
CTGAGCCCCCTGAACCTGTAGACATATCGACACCAGCTTTGCCAAATTTC
AGATTCTCACACAAAGAGAGAAAAACTTTGAACTTCAAAGACCCTGAGGT
TGCTGAAGACCCTGAGGTTGCTGAAGACTCAATGGCTGAAGCTCAACTCC
CTTTCTCTGCCTTATTGGCTAGTAACGTAGACATTACTGCCCTTCCCAAA
TTTGGACTAAGTCAAAATGATGATATTATAGAATTTTTAACTAAATTAGA
TTTATCTTTGGCTTTCTACCATCTTACGGATGAACAAAAAGCCAGAATCA
TCCCTCTTACCCTTAAAGAACGTGCTTATACCTTCTATCTAACGCTGAAC
CAGAGAATCAAAGATAAttatcatcttttaaaagaagcCTTGAAAAAGGA
GTTTGATGCCCCTGAACTTAAATACAGAAAAAGACAAGAGCTTCATGGCA
TCAGGCAAAATGGAGATGCCATATCCCATTACCTTTCCCGGGTagaaaaa
ctttcacaaaatctTGGAGTAACCGATCAAACAAAACTAGATATAATGAT
TTCTGGGCTGGATGTGCCTTTTCGGCGCTATATCCAGATGAAGCAGCCTA
GGTCTTATAGTGAAGCAACccacaaactgcttttgaaagaATCTGTTAAC
CCTCCCCAGGACAATTCTTCAACAATGAACCATATATTAGCTGCAATAGA
GTCTTTAAAACCTGCTCAAACTGCTCAAACGAGAAGTAACTCCAATAATT
CATCCCCACGAAAAACTCAAGCTATGACTTGTCATTATTGTAATAAAGTA
GGTCATTCAATGAGAGACTGCCATTCAAGAAAAAGAGATCTCTCATCCCA
AACAAACTTCCGTCAAAACTCCAAATATTCAAATAGACCTTCCAGAGGAA
AACCTTTTTCAAAGTCTACCAAGAATGTTGAATGCTATGCTTGCCATAAA
ATGGGTCATTACTCAAACAATTGccctgaaaaaggaaaaacagaATGACT
AGGCAAAGGTATAGGAAACACTGAGGAAGTTATATTGTTAAAAATCGATA
ATGTAAAATGCAATGAAACTTCAAGAAAATTAAGATCAGTGTTTTGGACC
AATATTTGTAGTAAACCTTTGCAAACACTTATTGACACCGGGTCCTCAAT
TACAGCTATGTCTTATAAGACCCTTAATAACTTCAAAGATACTTTTTACA
AAGCAAATATCCCACCTAGCAAAGTTGAAATGGCTAATGGAGATTATGAA
ACTGCTATTGAAGTAGTCAATCTTCCTATAACCATAGGAGGAAAAACATT
CTTCCATCCCACCCATGTATTTAAGAATTTACCATTCCCCTTACTATTAG
GAGATGATTTCCTCGAAGCAAATCAACGAGAGTTGAATTTTAATGGTTCC
ACGGCAGAGCTAAAATTAATTGACAGTGTAGAAaataatttagattttat
tGATGGCAATGCGAGTGTTTTAAAATTACCATCTTCCAGCCAAATGGTAA
CTCCAGATGAACCTCTGGTTTGGACAACTGAAGTCCGGAAATTTCCTCCA
CGGACTCTAACAACAATTACCTTACAAACAAATGATAGGttaattgaaga
tttttttatatttaattgaaaataacaGTTCAGAAGAAAGCCTTTTGATC
ATAACTCCCCAGCTTTCAAGCTGTGAAAATAACAGCCTAACTATTTTCGT
GGCGAATCCCTTGAAAAACGAGGTAGAAACTATGCTGTCTCTCGCTACTA
CACCAGTAGAGACTGTGAAAGAACCTAATTTTGAAAGACCAAAACAACCT
GAATATGAGCCTTACCCCCTAACAGAGGAACAGAAAAAGGAGCTAGAGGA
GATACTTGATGAGTATAAAGATGTGTTAGCAAGCAAGGATGATCCCTTAG
GTCAAACCGATAGAGTTACACATACAATAGTTACTGAACATGAACAACCC
ATTAGGCAGAAACCTTATCGCCTCTCTCCATCCCAAAAGGAAAACCTTGA
AGTAGAacttgaaaatcttttgaaaaaggaTATAATACGACCATCTAGTT
CAGCTTGGTCGAGCCCGATTGTGTTGATTCCCAAGAGCGATGGTAGTACC
CGAGTCTGTATAGACTATCGGAAGCTAAATAAAATTACCATCAAGGACGC
GCATCCCCTACCAAAAATTGAAGAGATATTAGATCATCTTAACGGTTCTA
AAATATTTACTACGATAGATTTGTTAACCGGTTTTCATCAAATACCAATG
GATAAGGAGAGTATTCCTAAGACAGCTTTTGTAACTCACAAAGGCTTGTT
TGAATACCTCCGAATGCCTATGGGTCTTACGAACGCGGTAGCGTCCTTTG
AGAGGCTAGTTGAACAAGTCTTTGCATTAGAATTATGGGTTTTCCTCTTG
CTTTATGTAGATGATTTGATTATCTATTCAAAATCCCCCTCTGAGCATCT
AAAACAAATACGTGTAATTTTATCAAGACTACGAGAGAATAAATTACAAG
CTAAAGCTAGCAAATGTCGTTTTGCCATGAGACAACTCTCTTTTCTTGGT
CATGTTGTAAATGAAAATGGCATATTACCGCTAGATTCTAATACTGCTGC
AATCAAAAGCTTTGATTATccgaaaaatgtaaaagaacTACGATCATTTT
TAGGAATGAGCTCATACTACCGAAAGTTTATTCCGAATTATGGAAAAATA
GCGAGATCTCTGACCACTCTTTTGAAGAAAGATACTCCGTTTCTATTAAC
AGATGAAATGAAGAAAGATTTCGAtactttaaaaatgaaattgataACAC
CGCCCCTTTTGCGCTACCCCGACTACGAGAAGACGTTTGTTGTAGTTACT
GATGCTTCTAAGTATGCTATTGGCCATATAATAGCTCAGGAAGTTTCAGG
AAAACACGTCCCCATAAGATACGGTGGTAGAACATTGAAGTCAGCAGAAA
TTAACTACACAATATCCGAAAAGGAAGCCTTAGCCTTAGTTCATGCCATT
CAGAAAAATCATCATTATCTTTATGGAAGGCCATTCATTGTTTATACTGA
TCATCAGCCGCTACGTAATATGGTAAATAGCCCTGAACCGACTGGTAGGA
TTTGCAGGTGGGGATTGACCCTCCAGCAATACGACTATGTCGTGAGATAC
CTACCTGGAAGTCAAAATGTAGTTGCTGATGCCCTTAGTCGTTTGAATAA
TATTCACCCAGACGTTGATGATAACGAAATCCCTAGAGTAAATCTTATTG
ATCATGAAAAATCACAACCGATATCATGTGTCATATTGCCTAACGAAGCC
ATGGTAACGGAACAAGACAAGGACCCTGATATTAGAAAGATAAAACTAGA
ACTAATGGCTAATGACTCCTCCCCTTTACATGACAAATTCGTAATCGATC
AAAACTTCTTATTTCGAGTGAATCCGCTTAACACTGATAACGGAAAAAGA
CAATATTTCGTTCCTCGTCATAAACATTATGAAATGATTGACAAATTTCA
CTCCCCAAATCACATGGGTCATTTCGGAATCAGTAGTACAATCAATAAAC
TCGCTGAAAGATATTATTGGAAAGGACTTGCTAGAGATGTTACGCATTTT
ATCAATAATTGTACCGATTGTAATATTCACAAAGNACAATCAATAAACTC
GCTGAAAGATATATTCGAAAGGACTTGCTAGAGATATTACGCATTTTATC
AATAATTGTATCTATAGCAATATTCACAAAAGAAAGACTAATAAAGCTCC
TGTCTTTTCTATCCCACTGACCCCGCCTTTTAGTAACATTGTCTGTGATG
TCCTTGGCCCATTTACTCCAACAAAAGATGGAAATAGGTACATAATATCG
TTTATGGATCGATATTCGTCCTGGCCTGAAGCTTTTgcagtaaaatcaaa
aattctgaTATGATACTATGACAGCCCAACCAAGTGAAAAACCATGATTA
CGTCGACATTAAACCTATATCTGAGCCTGTCACTATACAGAAAATAGGTA
ATTATATCCATATTCCCTCACTAGAAATAGGAGGTGAGATCTCGTTCAAT
CATCCTTTGAGTTCCCATGAGACCACTACTAAAGGTAAATGGTTTACACT
TGATAATGGTATCATTATCGAGGGCAACGGAACTCGATTTGATTATAGAC
AAGCCTCCTTCaaaaagatagtatttcttGCCAAAAAGTTTTCTAGAGAA
CAAGGACTTCCCTTGGTACAGGCGCACCtaattgaaaatttgataaacat
aAAAGAACAAACCTTACACGAGGCAAAGCGAACATGTTTTATTCAAAAGG
AGATTAGGTCTATTCACCAATGGCTTTCCAACCATTTTCCTGACTTGGTC
GCAGAATTGGTATTTGGCAGAAATGACATAGTTGCTCACCCAGCTGGTGA
TGCATATGAAGTCAGTGAATGCCGTCCCGTCCATTATACTTGTGTAAAAC
TGGATAGGAGGTCTAATAATACCAAGCTGAACAACTCTTGTTTCCAATAT
TTCCCTTTACAAACTCCGGATTCTGACGTCACGCAATATATTCAAATACC
TTCACGTAGAGCTCATTTTCATTCTCCACAAATAAATTGCGATGACTTGC
CCAAACAAACAGTGCTGCAAACAAACCAAGGTCCGATTGCCGTTAGCCCA
AATGGTCATTATAAAATGATTAACCTAACAAAATCTTCGTACTCCCCAAA
ACTATGGATGACTCCTTTAAAACACACATATGGATATTCATCTAGAATAT
TCATAGATACACCAAAAAGAATAGAACCATATcctcttcttggaataatg
tctCAAGTCCATGAAAGCATGAGACAACTACAAGAAAAGGTTGATCAAAC
TTCCCAACACTCATCCCCTGACATCTTCAGCAGCATTACCTCGGCAATAG
GCACGTTGTTGGAATCAGCTGGTGCTGGAACAAGTAAAGTAATCAGTAGC
TTGGGTACCAGCATAAAAGCTGCTGCTGAAGGTGCAGGAACGCTAGGAAA
AGATGTGATTTCCAGCTCGGGTGAGGCGTTGGCAGAAACTATTCAGGCAA
GTGGATCTGCCATCAAAGACGTGGAAGATGGTAGTGCGAACATCATAGAC
AGTATATTGGGTGGAATCCACGGAATATTGGGCATGACCGCTTTGTTGCT
TGCAGTTTTGGTGGCAACGTATCTTGCTTATCAAAAACATCAAGAAAGAA
AGGAGAAGTCCAAGAAGAAACAGCAGATGATCGAAGGAATAGTAGCCGAT
CCAGTATTGCTACAAAGATTGATGGAGCAGTTGGAAGAGTCAGGATTATG
AAATCCTATATGTAACCTATTTAAATCTATTCTATTCAACGGCATAAGTT
AACTTATCGTATTATCTACCAACTAATCATGATTAACACGTTATCGTATG
AAGCTTCACCTTTCTCTTTATATGTTCTAACAAATTTAGTCTTACAACTC
AATCTAGTTACTAAATCGATTCGCAATGGAGATGGTTGAAGAATTCGTGT
TCGATGTAGACGAAACATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNTTTACATAACTTGGAGTAGTATGTCCTTAAGA
CAGTGCTCATTTCCTACAGTTCGTTCGTAATTCCGATCATCTAAGACATA
AGAAAGCGGTGTGGACCTTCAACACAGTCAcaatcacaaaaacaaaatca
agaattgaaaaattggacatCCATTGGAATCGAACTCGGAACCCCATGCA
CATGAGACAGACGATCTAACTGCTTGAGCCAACCACGCTTTGTAGGTAGT
GAGGGAAAGCgtgaactgataagaaagaaaaaggaaagaaagaaatgaga
agaaaattaattcccgctttgatgttattatcgaaacaaaaggatcagtc
atgccgaaATTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNtttccacacgtcagcaatctagtttctataaata
tgaaaactagattgtaaggaagattctaaaaaataatagctgttttctta
gacgactacgttaactataaagtgcactcacAATCAttaatttgtcagat
ctaacaaaatgaataatgaaaatgtCATCAAAGGACAATCAAACGAAGGA
TTTTCCGTCAAGAACCTTGAAAatattccaacaacttccatcaaaatgat
ctgcCGCAGAAAAGTTctactattttgaaaaaaaaaccttaaaaacaaCA
TATGCTGTTTGAGAATTTGTCTGGGTTGACAATACAAACTATCTCACgac
tgaaaaaattttaatctgtcaatcattttctcaagcgaagagtacaaGAA
Acaattctagctttacaatagtgtcacagatcatcagtggatagtgttca
attattattattcctttattttcatttgtggaattttcacaaaaaaaggt
aaaatacaaaagttgtattttttactgctctattcacatactgcaTTTGA
AAGATATTCTATATAGCGTTTTTttacaaacttcaaaaaactgatttttg
tctgGCTTTTGCAGGACTTTAGCTTTAAGTGCTTAAATGCAACATTGGGT
ACAAAGTCCCAATTTGTCTATGTAAATTCTGGTGAATTTTGTGTGAAAAG
TTAGGGTTATACTATTTTGTTTGCAACAACAATAACAAGAGTTGCAAAGT
TCCAAATTCCAAGTCAATTACATAAAAATTAGaaacttgaaataaaataa
aagaacacATTATTAATGTGTGTCAGCCTGCTAATCAATGGACCAAAATG
TATTATCAATATTACCAAGACGGACTTTGGGAGAATGTTACGGGCTATAG
ACCTTTTTGTAGCATCTAGGTGCAATGTCATGTtggataattaaaaactc
cagcaccaaaacaatgataagaaaaaaattagtgCGCACTCATTATGCAT
TAATGTGTCATTGCAGGTATTTGTGTtaatgctggattttttaattACCC
AACGTGACACCGATCAAAAGGTCTACTTATTAAGCCTCAGCCTGTACAAA
TGATATAATGGTTCAAAAGGGCCAGATTATTTTCTCATAATTTAATTTAT
AAGTTTTACAGTGCATTATTGTTGCTTTTATGTCAAGTAAATGATCTGGA
AAGATAAATaatgtatttttattgtttttgtttcagAGATTGATTACAGT
GAGAAAAGCAGGCATTGTCCATATCTTGATACAATCAACAGGTAAAggct
gttgtttttgtttgtaaatTTACAATATctactgaaatatttttttacat
caTAGATAAGAAATTGTAAGTTAGACCAATCGGAAATCAATCTATTCaat
ctttttgtttataaaacaaGAAAACATACCATCTTATGTATCGTATGTTT
TCATAGACAATCAATACAATTTGAAGAACGTTTTAAAGGAAATCATTTTG
TTGATTAAAGATAAagtcaaattgaaaaaaatatatgattAGGCACATGT
TAAAATCACTTTCTGTCAGCAAATTTTATTGATCAAACAGTTTTTATTGA
CtgtcaatatattcttttagttttcaagaaaattgatttacAGTCAATGT
AAAATTATTTATGTTAATAATTTGTACATATTTAACAGTCAATACAATTG
TTAATGCTCATAAAAACTTAATGGCAGTCAGtgaaaaacattgaacatgC
CAAATCAACGTTTTTTGAGCAGGTACACTACTACACTCTTTACCTACATG
GTGACTATTGATAatgaataataataatgaagtttctattttcagaactg
ttttggattttgattttgagaaacTCTGCTGTGTTTCTCTGTCTCATCTC
AATGTTTATGCATGTCTTGTTTGTGGAAAATACTTTCAAGGTAGTTTATA
TTTGTCTTTCAAGACCAATCTCTGGTTCGATTTTATTGCATCTTCTAACC
TAGAGAGAATCTAGGATATTGCATCTTTCATTCATAGTACTATAAGagag
aaaaaatttctttcttattaATTTTCCCTTGGTTGTAGAAACTTCTTCCT
TTGTAAAGTGAATTGTAAGCCTCCTGGTTCAGGAGAATTTAAAGATTCAC
CAATTCACCAAggttttactttttatattGTTACACAGCCAAAtgtcaaa
ttctttttttaatttaaagaaTTTCCACGTTTCAGGAAGAGGTCAGAATT
CTCATGCTTATACACACAGTGTTCATATTGGACATCATGTTTATTTAAAT
TTACACACATTGAAGGTATGttgttaaaataattttctcatcTCAGGATT
CTTCAGTATGTCATTATTCTGTCATTCATCTTGGAAAGTATGCATAGTTT
TTGTGGTAGTTGTTGTTGTTACTGTATTGCTATCAACAATATTTTGCTAC
AAAGTTAAAGTCACAGGATTCATCTTCTACTTttattgaataaattttag
aaTGTTTTACCCTTTTTATAGTTTTACTGTTTACCGGATAATTACGAAAT
TATTGATTCATCCCTGGAAGAtataaaggtttgt

Coding sequence (CDS) from alignment at scaffold_284:1093845..1114928+

>TCONS_00056885 ID=TCONS_00056885|Name=TCONS_00056885|organism=Clytia hemisphaerica|type=CDS|length=2220bp|location=Sequence derived from alignment at scaffold_284:1093845..1114928+ (Clytia hemisphaerica)
ATGTGCGCGAAAatgaaattcaagatggcggcgatAAAAACAGAACCTGA
GGAGTTTGAGGAACCGAATTTGAAACGTCTTCATGGTTTGGTTGACAATA
CATATGATAGTGATGATGAAGATATCAAAGAAATCAAGCCCAAGATAGAG
AAGATTGATTACAGTGAGAAAAGCAGGCATTGTCCATATCTTGATACAAT
CAACAGaactgttttggattttgattttgagaaacTCTGCTGTGTTTCTC
TGTCTCATCTCAATGTTTATGCATGTCTTGTTTGTGGAAAATACTTTCAA
GGAAGAGGTCAGAATTCTCATGCTTATACACACAGTGTTCATATTGGACA
TCATGTTTATTTAAATTTACACACATTGAAGTTTTACTGTTTACCGGATA
ATTACGAAATTATTGATTCATCCCTGGAAGAtataaaggtttgtATGTGC
GCGAAAatgaaattcaagatggcggcgatAAAAACAGAACCTGAGGAGTT
TGAGGAACCGAATTTGAAACGTCTTCATGGTTTGGTTGACAATACATATG
ATAGTGATGATGAAGATATCAAAGAAATCAAGCCCAAGATAGAGAAGATT
GATTACAGTGAGAAAAGCAGGCATTGTCCATATCTTGATACAATCAACAG
aactgttttggattttgattttgagaaacTCTGCTGTGTTTCTCTGTCTC
ATCTCAATGTTTATGCATGTCTTGTTTGTGGAAAATACTTTCAAGGAAGA
GGTCAGAATTCTCATGCTTATACACACAGTGTTCATATTGGACATCATGT
TTATTTAAATTTACACACATTGAAGTTTTACTGTTTACCGGATAATTACG
AAATTATTGATTCATCCCTGGAAGAtataaaggtttgtATGTGCGCGAAA
atgaaattcaagatggcggcgatAAAAACAGAACCTGAGGAGTTTGAGGA
ACCGAATTTGAAACGTCTTCATGGTTTGGTTGACAATACATATGATAGTG
ATGATGAAGATATCAAAGAAATCAAGCCCAAGATAGAGAAGATTGATTAC
AGTGAGAAAAGCAGGCATTGTCCATATCTTGATACAATCAACAGaactgt
tttggattttgattttgagaaacTCTGCTGTGTTTCTCTGTCTCATCTCA
ATGTTTATGCATGTCTTGTTTGTGGAAAATACTTTCAAGGAAGAGGTCAG
AATTCTCATGCTTATACACACAGTGTTCATATTGGACATCATGTTTATTT
AAATTTACACACATTGAAGTTTTACTGTTTACCGGATAATTACGAAATTA
TTGATTCATCCCTGGAAGAtataaaggtttgtATGTGCGCGAAAatgaaa
ttcaagatggcggcgatAAAAACAGAACCTGAGGAGTTTGAGGAACCGAA
TTTGAAACGTCTTCATGGTTTGGTTGACAATACATATGATAGTGATGATG
AAGATATCAAAGAAATCAAGCCCAAGATAGAGAAGATTGATTACAGTGAG
AAAAGCAGGCATTGTCCATATCTTGATACAATCAACAGaactgttttgga
ttttgattttgagaaacTCTGCTGTGTTTCTCTGTCTCATCTCAATGTTT
ATGCATGTCTTGTTTGTGGAAAATACTTTCAAGGAAGAGGTCAGAATTCT
CATGCTTATACACACAGTGTTCATATTGGACATCATGTTTATTTAAATTT
ACACACATTGAAGTTTTACTGTTTACCGGATAATTACGAAATTATTGATT
CATCCCTGGAAGAtataaaggtttgtATGTGCGCGAAAatgaaattcaag
atggcggcgatAAAAACAGAACCTGAGGAGTTTGAGGAACCGAATTTGAA
ACGTCTTCATGGTTTGGTTGACAATACATATGATAGTGATGATGAAGATA
TCAAAGAAATCAAGCCCAAGATAGAGAAGATTGATTACAGTGAGAAAAGC
AGGCATTGTCCATATCTTGATACAATCAACAGaactgttttggattttga
ttttgagaaacTCTGCTGTGTTTCTCTGTCTCATCTCAATGTTTATGCAT
GTCTTGTTTGTGGAAAATACTTTCAAGGAAGAGGTCAGAATTCTCATGCT
TATACACACAGTGTTCATATTGGACATCATGTTTATTTAAATTTACACAC
ATTGAAGTTTTACTGTTTACCGGATAATTACGAAATTATTGATTCATCCC
TGGAAGAtataaaggtttgt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035838XLOC_035838Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056885-proteinTCONS_00056885-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056885-exon-scaffold_284-1491911889:1093845..1094056TCONS_00056885-exon-scaffold_284-1491911889:1093845..1094056Clytia hemisphaericaexon
TCONS_00056885-exon-scaffold_284-1510915933:1093845..1094056TCONS_00056885-exon-scaffold_284-1510915933:1093845..1094056Clytia hemisphaericaexon
TCONS_00056885-exon-scaffold_284-1575043694:1093845..1094056TCONS_00056885-exon-scaffold_284-1575043694:1093845..1094056Clytia hemisphaericaexon
TCONS_00056885-exon-scaffold_284-1491911889:1113581..1113635TCONS_00056885-exon-scaffold_284-1491911889:1113581..1113635Clytia hemisphaericaexon
TCONS_00056885-exon-scaffold_284-1510915933:1113581..1113635TCONS_00056885-exon-scaffold_284-1510915933:1113581..1113635Clytia hemisphaericaexon
TCONS_00056885-exon-scaffold_284-1575043694:1113581..1113635TCONS_00056885-exon-scaffold_284-1575043694:1113581..1113635Clytia hemisphaericaexon
TCONS_00056885-exon-scaffold_284-1491911889:1114190..1114284TCONS_00056885-exon-scaffold_284-1491911889:1114190..1114284Clytia hemisphaericaexon
TCONS_00056885-exon-scaffold_284-1510915933:1114190..1114284TCONS_00056885-exon-scaffold_284-1510915933:1114190..1114284Clytia hemisphaericaexon
TCONS_00056885-exon-scaffold_284-1575043694:1114190..1114284TCONS_00056885-exon-scaffold_284-1575043694:1114190..1114284Clytia hemisphaericaexon
TCONS_00056885-exon-scaffold_284-1491911889:1114580..1114659TCONS_00056885-exon-scaffold_284-1491911889:1114580..1114659Clytia hemisphaericaexon
TCONS_00056885-exon-scaffold_284-1510915933:1114580..1114659TCONS_00056885-exon-scaffold_284-1510915933:1114580..1114659Clytia hemisphaericaexon
TCONS_00056885-exon-scaffold_284-1575043694:1114580..1114659TCONS_00056885-exon-scaffold_284-1575043694:1114580..1114659Clytia hemisphaericaexon
TCONS_00056885-exon-scaffold_284-1491911889:1114866..1114928TCONS_00056885-exon-scaffold_284-1491911889:1114866..1114928Clytia hemisphaericaexon
TCONS_00056885-exon-scaffold_284-1510915933:1114866..1114928TCONS_00056885-exon-scaffold_284-1510915933:1114866..1114928Clytia hemisphaericaexon
TCONS_00056885-exon-scaffold_284-1575043694:1114866..1114928TCONS_00056885-exon-scaffold_284-1575043694:1114866..1114928Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_284supercontigscaffold_284:1093845..1114928 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
45.6656	39.0378	81.9679	84.1759	16.6824	17.411	15.3041	21.9127	20.2523	24.864	17.1218	15.2028	13.8156	14.487	17.2189	20.8157	23.4838	22.5946	4.96232	7.99958	20.8593	24.249	33.2571	36.4825	15.0359	19.4578	22.187	13.8563	25.9413	23.8548
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001607Znf_UBP
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008270 zinc ion binding
Blast
[Close]
BLAST of TCONS_00056885 vs. Swiss-Prot (Human)
Match: SNUT2 (U4/U6.U5 tri-snRNP-associated protein 2 OS=Homo sapiens GN=USP39 PE=1 SV=2)

HSP 1 Score: 171.014 bits (432), Expect = 4.619e-50
Identity = 76/90 (84.44%), Postives = 81/90 (90.00%), Query Frame = 2 
Query:  227 EKSRHCPYLDTINRTVLDFDFEKLCCVSLSHLNVYACLVCGKYFQGRGQNSHAYTHSVHIGHHVYLNLHTLKFYCLPDNYEIIDSSLEDI 496
             +SRHCPYLDTINR+VLDFDFEKLC +SLSH+N YACLVCGKYFQGRG  SHAY HSV   HHV+LNLHTLKFYCLPDNYEIIDSSLEDI
Sbjct:  100 RRSRHCPYLDTINRSVLDFDFEKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 189
The following BLAST results are available for this feature:
BLAST of TCONS_00056885 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SNUT24.619e-5084.44U4/U6.U5 tri-snRNP-associated protein 2 OS=Homo sa... [more]
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