TCONS_00056885 (transcript) - C. hemisphaerica

Overview
NameTCONS_00056885
Unique NameTCONS_00056885
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length505

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00056885 ID=TCONS_00056885|Name=TCONS_00056885|organism=Clytia hemisphaerica|type=transcript|length=505bp
TATGGCGTGTTTTCCCGCGAAATTTTGACTCGATTTATTTCtcagaaaat
gaaagtgacgcATGTGCGCGAAAatgaaattcaagatggcggcgatAAAA
ACAGAACCTGAGGAGTTTGAGGAACCGAATTTGAAACGTCTTCATGGTTT
GGTTGACAATACATATGATAGTGATGATGAAGATATCAAAGAAATCAAGC
CCAAGATAGAGAAGATTGATTACAGTGAGAAAAGCAGGCATTGTCCATAT
CTTGATACAATCAACAGaactgttttggattttgattttgagaaacTCTG
CTGTGTTTCTCTGTCTCATCTCAATGTTTATGCATGTCTTGTTTGTGGAA
AATACTTTCAAGGAAGAGGTCAGAATTCTCATGCTTATACACACAGTGTT
CATATTGGACATCATGTTTATTTAAATTTACACACATTGAAGTTTTACTG
TTTACCGGATAATTACGAAATTATTGATTCATCCCTGGAAGAtataaagg
tttgt
Run BLAST on NCBI

protein sequence of TCONS_00056885-protein

>TCONS_00056885-protein ID=TCONS_00056885-protein|Name=TCONS_00056885-protein|organism=Clytia hemisphaerica|type=polypeptide|length=148bp
MCAKMKFKMAAIKTEPEEFEEPNLKRLHGLVDNTYDSDDEDIKEIKPKIE
KIDYSEKSRHCPYLDTINRTVLDFDFEKLCCVSLSHLNVYACLVCGKYFQ
GRGQNSHAYTHSVHIGHHVYLNLHTLKFYCLPDNYEIIDSSLEDIKVC
Run BLAST on NCBI

transcript from alignment at scaffold_284:1093845..1114928+

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00056885 ID=TCONS_00056885|Name=TCONS_00056885|organism=Clytia hemisphaerica|type=transcript|length=21084bp|location=Sequence derived from alignment at scaffold_284:1093845..1114928+ (Clytia hemisphaerica)
TATGGCGTGTTTTCCCGCGAAATTTTGACTCGATTTATTTCtcagaaaat gaaagtgacgcATGTGCGCGAAAatgaaattcaagatggcggcgatAAAA ACAGAACCTGAGGAGTTTGAGGAACCGAATTTGAAACGTCTTCATGGTTT GGTTGACAATACATATGATAGTGATGATGAAGATATCAAAGAAATCAAGC CCAAGATAGAGAGTAAGTTGTGTTTTTGtgcgaattcttttcaaatccAA AATGAACTGCAATTTTAACCAACGTTCTAAAAGCTAATAGTATAATTTTT ACTTAACAgttaccgtgagatcgggtaacttgcatcggtggaggctaaca tgcatagccctcaaatgaatgacctctctggtcattaaaatacaactatg cagctccgctcgcagctctactctaccatttttgttttgatttaactNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNagaacagagtaatcaaactcgttagaaaaagtacc attagaagtcataaaaaatcaacctgaataaatgcaatcgaaattccaga gaacttaataattccccaaacaacatatTACTAccatgtcaaactcccat cgcATAAAtcttacaattacgtcagagtagactacgctcgccaccgaaga ggtttatttggaaagggtaattatattttattgttcgcttcttttttaaa gattcgccgggttgaaaaagtttatgaatttctttgtacatattttactt accccaaatatttaggaggctgagttttaaacgaatcgtcaagttgaaac aaacgaacgataaatgtatcaaggtctgttttatttaccccctggtgact taacaaaagagacttaactcgatgttacaatccaattattaaAAGTTTGT Cttggcctttttataatgagcgagacatacgttctctgattacgcaattt tcatattgacattttcgaggcatttttaTGTAActgcttaaaaaagcaaa aaagacatattgccagacggtgtcaatcgaacgaatcgaaagccgaatca attgaatgcaattgaacacaatcgaataattgcaattcgattgtcgaacg caatcgaatcgcaatcaaatattacctagGATTTGCcattcgattgcttc gattacgttcgattgatttagattttattcgcttttgtACGATACTTTAG CGCTCGGccgtccacgctaaaaagctctaacggagtgatccaatttaatt tacagtcaggcacatcctggcaaatgaacggggtgagcatttgcatgggg tattcgtcacccagtgtaaatgagataggacgtctcaggctaaaagtgtN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNaatcttcgaagacaaaattgacccatggaaaaaaaatttcat ctatgcagttctttgaaatgaagcaaaatatttccaacccggttcaattg cgtggggtattcacttttgttttcgaccccttgcatttgccaccaatcgc aagcgaaaaataccccgttcgtTTGCCAGGATGTGTCTGACtgatttaat cgcaatcaaactcatcaaacgttatcgtaatcgaacgaaaaATCGAATAT TAATCAattgtaattgacaatcaatggaaccaatggaacatagtcaacta ttaatcgaaccaatctaaccttacttgGCTTACTCAAAaagcaatcgaac acaatcgaatattacccaggaattggccgttcgattgagattcgattacg ttcgacaatcgaatctcaattattcgatcgtgttcgattacgttcgattg gttcgattgcgatttttgttcgaagttgtctgattgacaccgtctgggta TTGCtattaggggtcactcacatatcgattcttcccacgatTAACTGAAA AACCCCTACCCCCACCTCTTAACGtcaaagtttttaaattgtcaAAAGTT GTtgaaactttaaattttctccttcacttcCATCGTTGCTTTGATTTGTC AGCCATCTTTTATTTTGCTACGGCTTGATGCTCAgcttacatttaaaaaa taatggagataaggcgaaaataaaaaaatgtagtgtttccggaaaccggt caggtgaaaaaaataatttttctgacCCGACCGCAGACTATGCgttcatc tatatggttcatcataaagaaaatcaagttggccgttcaagctatcaaac gtcgtttgattagatattcccgcttgtaaatcaagttttgttcgttagta gttgatacattaaacatagtcgtctaagaaaacagctattttttttagaa tcttccttacaatctagtttttatatatacttataaaaaagttCACGCTT TCCCTCATACTctccaagcgtggttagctcaagcggttagagcgtctgtc tcataagcatgggtttccgagttcgatcccgatgggtgtcaaatttttca attcttcaaatttcttttttaaaattctctttctattataatgaaggtca atcaaacaagtaactagcatatattacctccgctctctgtgtaaggttta gataagctatgatagcatcacttaataagaacttttttaagttttttttt cttcaatcttttttttaccacaagcgattattcaaggctgagatatagaa gaacgggtATAGGTGTTTGCGCCTGTGTTTGCtgactgacagtttcagtt tcactttcactttcagccagcgagtgagcgagcgattctttgtaagagaa tcgtcaaataacttctttcagaatcattgaacttctcgttttatacttta aaggcagaatgataattgatttccgagtcaaaatgtttgacacttgatcc aatcgtttgcttatctttcttgcgtagtcgttatttgaatttcggtattc aatgcttataaagtacggttgttataagggtattaaactcctcactagga gggaacagatcataaattcaaattgaacgcgtaattactaatagcaatta acattacataacgcgTTGATATCTCTTCACTCTCATGAAAATgtgattca aaattaaagtgatgagcacaaaaacaaaatcaagaattggaaaattggaC ATCTATTgggatcgaactcggaaacccatgcttatgagacagacgctcta accgcttgagctaaccacgcttggagAGTGTGAGGGAAAGCGTGAactta taagaaagaaaaaggaaagaaagaaacgagaagaaaattagttctcgctt tgatgttattatcaaaacaaaaggatcagtcatgtTGACATTCATtttca cacgtcagcaatctagtttttataaatataaaaactagattgtaaggaag attctaaaaaaaaataacagttttcttagacgactacgttattagtattc agggcttacttcatactgtttgtacataaaatttatctttaaagttctat ttcaatgatcaagagttatcaaaaatagcaaaaaaattattttctgacca tgcgcatgagagcttttttccttcacccgcattccggaaacactacattt tatTACTTTCGcttaatttctaaacttttttcggaAAGTTGCTGGGATTG ATTATCTCCGTAATGTAATCATGTGATCAACAGAATAGCAGGATTTCAAA AAGGAAAGACCATCTGCAAAATTCAAGTGCACCACGCGGACcgtctaaac aaaaggaacacgAGAAATAAACATCgagccgtttgttttggttaaaattg ttCTATAATAAAATAGTGTTCCATACCATGTTGATTGCCCGTACTATGTT GACTGAAACGGCCGATTGTACCATGTTGACGGTTTACGTACCAAGTTGAC GGGTGCCGATTTTTATCCACAGCTCGCTCATATTGACTTGTGATAACTAC AGTAATTTGGTTTCCCAAGTGATACAGTCAACTTGGTATGAACAAAAACG TTGTACCATGTTGACCTGAGATTACTAAGTTAGCTCatatgtgacacagt caacttggTATGGTCAAAAACGCTGTATCATATTGACCTGGGATGACTaa gttggcttatatgtgacacagtcaactcGGTATGAGCAAAAACGCTGTAC CATGTTAAACTAAGTGACTAGATTGGCTTATTtgtgacacagtcaacttg gTTTGAACCTAATATCCGAAGGATGATCAAAATACCTAAGAAGATCGtga cacaaaaatattttgtccaagAAACCTGAACTTTTCTAAGACAATGCCAC CACACATGTCATAGAGAATCCCAAAAGCTCTATTCAATCTAAAGATTAAT ATTAACCCCCTTCAAAATATTAGCCGTATCATGTTGATCGAAAGTATACC AAGTTGACCGAAGAAGATTTTTATCGAAAACAGTCAACTTGATACGGCAA AACGCACGGGATGAAACAAATAGCGAAGCAAACGGATTTGTCACGgaata aacgtctcaaaaatcgatatttctggtgaaatttcttagctTCACAGACT CTAACCCCTTCCACCCCTTcccgtcaatttgacgttagtcttgggaaaaa tcgatatgtgagtgaccccttagcTTAATTGCAAgcaaaattgctaaaaa gatGCTCGCCTTTGCTGAAGACCTTTAATATTCCAAGGCAATAAAGATAT TTtgttatcaaaggcaaaaatCATAACTTCTACGTTAGGCCTGGGTCACC AATAAGTAACCTTTACGTCATTTCCAGCCCCAAAATGTGAGTCAGTTGGT CGGTCGGCATCTTAAATCATCAGAAAAATGTGCTCTGAATATAGGCGGTC TGGCAGTGCTAAAATCATCGGGAAAAATGCACTCAAGCATAGGTTTGTTC AGGCAACAAGAATCATTAAGCGCGTGAGCTGCAATGTGATCATTTTACAT ATTGTGATCGCACAAAAAGCAGTTGCGTAGCGCTTTTTAAcgcaaaaaat ctttgaaaaattgcagataaaaatcttaaaaacactcGATGATCAAAACG CTGGCTACGCTGAATCtacaaaattctttgaataGTATTactaaaaaatc cgacaaattttctgactttccgACTAGACAACGGTCAgatttttaagata gaaagCACCTTGAGTCAGTCGGAGGACAGGAACACAACTCATTTGTGACC GCGGCCTTATTCCCAAgcaattaaaaattacaaactttttctctttgttt ggaacgctttattttatcaaaacaatcagaaaTGATAAAATTGTCGTTTT TTGGACAGGGAAAGTACTTGAATCTGATTAGATGCGATAAAACAAGCCGC AGCGAAAGTTGCAATCAGGCGTTTGTATAAGTTCAGACGTAATTAATCAA ACAGCCAGTTTTAGTTTTagacaaaaaaatgcctaaTCTCGCAAACTCta cgtaaaaatacaaaaatgagaaGGTTTAATAGCTaagataaagatataaa aaattagaataaataggtaatttatacaattttaaattagatttgttaga ttaaaattcataaaaatttaaaaaagttcaaaaatagtacAGTAATAAAA AGTGTGTTATAAATAGTACACTAATAGGGGACGCACAATTAGCAGGGTCA CATGAGAATGGTGTTCAAAGCAGAAGGAGAGCACATACTAGAATTGAGTT GAACAAGAGTCCAGCTGGTCGCTAGAGGATAATgtagcaaaaaaaaacac aagtaTGAGCATAGACTCAGTGGAAAAACGGGCACAGATTTAAGTGTACC CTAGAATACTAAGCTATCAATAGAATTTTTGAATTCTCTTTCAGTTTTCA CATTTGCAGTTCTAATTGGTAATTTGTTCCATACTTTGACGGTAGATGGA AAGAATGAGTTTGAATAGCATTTAATCCTGCCCTGAATGGGCTGATATTT CACATTTGTACAACGCTGTTTAGCTGGGTGGATGCTGCTGTCAACGAATT TGTTTCCtgacaaaatatcaaataacattttcaatttcggTTTGGATCTC CTTGTTTCCAGTGTTTCAAgtttaagtgatttttttaGATTGTTTGGGCT GACTTCTGAACTCCATTCTCTACAGATCCAGCGGATAGATTTTCTCTGAA TCATTTCAATTTTCTGGGTAAGGGATTGGTTATCAGTGGGATCCCATACA GTGTTGGCATATTCCACCGTTGGTCTGATAAAAGTTTTATAACACTTCAG ACTGTTTCTTTGTCTGCCATTGATAGGTTCCTCTGAAAGAATATTCGGGT GTTATTTGCTTTGGAAGTTGCAAGATCGATGTGATTCTTCAAACAGAGAT TATTCGAGATTACGACACCGAGATATTTAGCTTTGTTAACAGTTTTGAGC TGTTGACCATGGATTTCTTAGGTTTTATCATGAATTTTTCGTTTGTTGGC AACTCTGAGGTTAAACCATTTGTCTGGGTGAAACTCCATGGACCATTTGT TTTCCCATTTTACCATTTCGTCTAGGTTTTTTTGAAGCTTTTCGCAGTCT TCCTGTGTGTGTATTGAGCGGTAAAGATATGCATCATCGGCAAGGCATCG AGGACAGTTCCTTGGGGGACACCTGAAATGACGTTTGAGTTTTTGGAGGA TTTCCCACAAACAACAACACATTGGGTGCGATGCAGTGCGATGAGATAGA AAGTCTGTAACCCAAGTTAGGACGTTGCCATGTACTCCATAATGTTTAAG TTTAATAATCAGTTTACGATGGCATACCTTATCGAAGGCTATACTGAAAT CAAGTAAAATACTGTCAACTTGTTCTTTCTTGTTGATAGCTCTAGCAAGG GTATCAATGGTTTGAAGCAATTGGGTCTTGCACGATCTTTTCTTGCGAAA GCCATGTTGAGTATCTGTAAGACAGCTGTTCTCCTCGAGGTGGTTGATGA TGTGGCTATGAACGATGTGTTCTAGAACTTTGCAGGTGACAAGACGTCAA GCTAATCGGTCGATAATTTTCTGCTTTGGACCTATTTTTGTTTCCTCCTT TGAAGATTGGACTGACTACAGCATGTTTCCAATCACTGGGTGTTTCCCTT GCTTTAATGATGCATTGAATAATAGGGTGAGACCGTCAGCAACTTGGTCA GCTGATTCCTTTAGAATACGGGCTCCGATTCCGTCAGGACCACTAGCTTT AAAGGGATTCAATTCTTTAAGTAGTTTTATGACTCCGTTTTCGGTAACAA TGATGTCATTGATCTTTTTTCCTTTAGGGCCTAACGGTGTTGGGGTTGTA CCATTATCTTCTGTGAAGACACTTGTGAATTGGTTGCCAGATTACTGAAC CAATCGGTACTTAATCAAACGACAAAAGTTCaattaaattatttatttaa atgaacttttcaaaagtctctaaaattgtgagtattcaatTAAGTTGGAC AAcaagaaatgtttgacaaatttgacaaaaagcTCTGTTCGACAaagttt gacaacaagaaatgtttgaaaaatttgacaaaaaactaCGTTTGACAAAG TTTGATAGTAAGAAAAGTTTGACAAATTTAGCAAATAGTCCTTTCGATTA CGTAATCTTATTTCAAGGATCAATCAAAACTCAGAGCGCCGATCTTTTTT GCAGCCACTCTCAGAGGCCTGGAAGGGTTTTCTTAAATTATTGTACAATT AAACTCGATAAAGTTCGATCAtgtaattttatattttgaagaatttgtga GTATTCAATTAAAGTTTGACAGCCGAACTTAGTCAAACATTAATTGGACA ACAAatttcgattaagttcgacaaagttaaattaaaaatatcgtttgttt gtttgtccgTTTGCTTTTATTATACACCAATCCACTCGATTTAGACTTAG AATCGACAGAGATTAACAGTTAGGGaagccatccaggatcctgccattct atcagccagcaaaaactaaatgacatgCTTGTAAACTAAAGTTTCTAACC ATTTTCtggcaaatgtggcaaaatttgagtgccataaataccaaataaaa aagatgtggtgaatctggcgttcttggcatttttggaactcaCCTCCATG GAGTTTgctccatacaaaacactgttctcacgagacctgtgttcttttcg ctccaattttgccacttttgccaatgattttgaaaaatagaagaccctcc aatgctaaagcaaaacaatgccgatcggcaatttgattggttaaaaaaac cGCCCGGGCGTATAAACACTTCGCGCTCTACAAACGCCAACAGAAAACTG CTGACGAAGCATCAGCATCGGCgtagcgatgtacaaatttgccatgaagc tatgatcttttgacattaaaattgtggatttggcaaagttggtgagtatg gcaaattttgaagtcaatcgaattggctgaaACAAAGATGGCAGTTGTCG TAAACCTAGACGACCCTCCCcctgaaaatccatatttcctTGGTTTTATT CCTAGATAAGTCTCCCCATGCCAATAAACCCAACCCAAAGTTATGTAATA CtccaaatcaaaattgatgatgtaGCTTTATTAAGAAATAATTGCTGTCA TCATTTTCACGTATAAGATTACTATAGTCACCATTCCCCTATATCTTTAT GTAGCCTTTTGTATTAAAGTCAAATTATAGAACAATAATCGTTATTATCA TCATTATTCATTGAATCGTATAAATACGCTTTATATCGTTTATTAACTGA CTTACTTACTCACTTACTTTTGGGTATTACTTTTGCATCTTAAACATGTA AGTGTTTATCTATATTTTATTAGGGATCACCCTTAGGGTGGTCCCGATCC TTCTGGAAGTACACTTAAATTCAGAATATTATTCGTATTTAGCACTCAGA ATTTCTCCATTTCCTGTTTGAACGTTTGAACTTTTATTTCTAACTAGTTC TGTGCAATTCATAGTGTTCGATTGAATCTCCCTTTTCTGCGTCCCTTAGT TACTCTGTTTGGAAATCCTAGTTGATCAAGAAATCCTTCAATTTGTTTAA GGAAAGTAAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTACATA ACTTGGAGTAGTATGTCCTTAAGACAGTGCTCATTTCCTACAGTTCGTTC GTAATTCCGATCATCTAAGACATAAGAAAGCGGTGTGGACCTTCAACAtg gaggttctaccgagatgTGTTTGTTGCGGTTCACGCTGCTTTAGATGTTC CCTTCCGTCCTTCCCTTCCCTTATGAATTATTATTTATTACTTATTTATT TCTGATTATTATGATTTACTTATCACCCAGTTTCCGTCCCAAATTCCGTC CCAATTCCGTCCCGTCCCGACATCTTTCAAATTATTCTTTATTTCATTAg ttatattattattttttgattgcTTATAGTGTTTCCGCTTCCTGTTTGGT AACTCTCACTTATCTTGTCATAAGTGATTGAGAATGTCATATTCAGTGTC CTTGTTAAAGTTGACGGCTGATAGTGATATGTGTCCTGTCCTTATATCCT GTCTGAttaattattttattaaacGAACACATTCTCACTTATTCCTTACA CCTTCGTTATATCATTTATTAACATCTAACCCCGTTTGATTTTCGACATC AGTACAACTGATGCTCTTCCCATTATGGAGAAGATTTGATCACCCTTCCC CTAATTGTGGCATTCTGTTATTACACATACACCATACCTATATACTATTT TTGGTACTGTGATTTATTTTGTACATATTAGTTGAGTAGCCCatcaagat tataaaaatgatgAGGCATAAACTCCTCCCTgtagtatttaaaaaaaaaa aaaaaccactaGGATTATCACAACATTCTTGCGAATTATCGTTATAAGTT GTTGAAAGATTATAGAATGATATGTGATGTCCTCCCGAAAAAGATTACCA AAATAGATTAAAAATATGATTTGAGCTTCTAAAATAAATCCGGATAAAGT GCATAAACGAAAATGTTTGTTAAAAAAGTGTCAGATGTATGTACTGAGTG CGTAACCACTCAGCGATGATTCTTTTCCAGTGCGTAACCACTGATGATTA ATGAGGCCTTTAAGTCCACGAAGTATGCAGTTAGAGTTTGACATCTGAGG GAAAGTGTCACTCCTTTGAATTTTAAGTGTCTTAAGCCGTCCTAAGAAGC GCTATATTAAGTTATTCCCGTGGCAAGATAGAGTAAAAGAGTGCGTAACC ACTCGTAGAAAACTGTCGGTAAGACAGTAGGAAACTGTTAGAGTAAACAG TTGAAATGTTTCCCTCCTTCCTCCTTCCCCCTTCCATGACGCTTTAAGGT AAGGGCCCCAAGTATCTTGAGTCGAATGAGAGGTGGATGGTAGTTTTGCA GGACAGGCAAGAGAAAAAGACACTGTTGATTCCGGTTTAACCATTTTGTT TACAGAAAAGACGTACATCAAGAGAACACATGCCAGATCAAGACAAATTA GCAAGAGCGCAAGCAAACGCCCTTGGAGTTATCCGTGCACATTTAGAAAA CGAATCAagctcaaaaacacaaagaagtCAGGTAGATATTGGAGAAGAAA AAGAATTCTCATTAGAAGACCCTCAGAGAATAGGCGAATCCCCATTAGAA GAGGTCTCTATTAGACAAGAAGACCTTCTAGAAGCCAGAAACCCCCCATA TGAAGAGGTCTCTACAGGGGTAGAAGACCCTCATAGAAAAAGGCAAAATC TTATATTAAAGGACTTAGATATACTTAAAGAACGTACTGATTGTTTTGTA ACTGAACAAAAGAAAtacattaaaacattaaaactcATAACGAATGCGTT AGAAGAATTACTCTTGCATGAGAGTTTAGAAACGAGTGTTGACTTAAGAA ACTCAAGAATTGACGTACTAGAGACTCTTGAAAAAACCGAAATCAATCAA GCGCGCGAAATATTGATAGAGGTCGATTTAATTCAAGGTCAAATTAACTC TCAAGAAAAAATTTTACAAGATTTGATAAACACCACTCGAGCTAGacctt ttttcgagttagcaTACGAATTGAAATACATTGAAAATACCTTTTTCGGC ACCAGCGAAAAGTTTGACAATTTAGTAAAAGAAATAAAGGAAACCCATTC TACCCTGCGAAAGAGGATAGAAAACCAACGAGCACGAATCTCTGGTAGCC CTGAGCCCCCTGAACCTGTAGACATATCGACACCAGCTTTGCCAAATTTC AGATTCTCACACAAAGAGAGAAAAACTTTGAACTTCAAAGACCCTGAGGT TGCTGAAGACCCTGAGGTTGCTGAAGACTCAATGGCTGAAGCTCAACTCC CTTTCTCTGCCTTATTGGCTAGTAACGTAGACATTACTGCCCTTCCCAAA TTTGGACTAAGTCAAAATGATGATATTATAGAATTTTTAACTAAATTAGA TTTATCTTTGGCTTTCTACCATCTTACGGATGAACAAAAAGCCAGAATCA TCCCTCTTACCCTTAAAGAACGTGCTTATACCTTCTATCTAACGCTGAAC CAGAGAATCAAAGATAAttatcatcttttaaaagaagcCTTGAAAAAGGA GTTTGATGCCCCTGAACTTAAATACAGAAAAAGACAAGAGCTTCATGGCA TCAGGCAAAATGGAGATGCCATATCCCATTACCTTTCCCGGGTagaaaaa ctttcacaaaatctTGGAGTAACCGATCAAACAAAACTAGATATAATGAT TTCTGGGCTGGATGTGCCTTTTCGGCGCTATATCCAGATGAAGCAGCCTA GGTCTTATAGTGAAGCAACccacaaactgcttttgaaagaATCTGTTAAC CCTCCCCAGGACAATTCTTCAACAATGAACCATATATTAGCTGCAATAGA GTCTTTAAAACCTGCTCAAACTGCTCAAACGAGAAGTAACTCCAATAATT CATCCCCACGAAAAACTCAAGCTATGACTTGTCATTATTGTAATAAAGTA GGTCATTCAATGAGAGACTGCCATTCAAGAAAAAGAGATCTCTCATCCCA AACAAACTTCCGTCAAAACTCCAAATATTCAAATAGACCTTCCAGAGGAA AACCTTTTTCAAAGTCTACCAAGAATGTTGAATGCTATGCTTGCCATAAA ATGGGTCATTACTCAAACAATTGccctgaaaaaggaaaaacagaATGACT AGGCAAAGGTATAGGAAACACTGAGGAAGTTATATTGTTAAAAATCGATA ATGTAAAATGCAATGAAACTTCAAGAAAATTAAGATCAGTGTTTTGGACC AATATTTGTAGTAAACCTTTGCAAACACTTATTGACACCGGGTCCTCAAT TACAGCTATGTCTTATAAGACCCTTAATAACTTCAAAGATACTTTTTACA AAGCAAATATCCCACCTAGCAAAGTTGAAATGGCTAATGGAGATTATGAA ACTGCTATTGAAGTAGTCAATCTTCCTATAACCATAGGAGGAAAAACATT CTTCCATCCCACCCATGTATTTAAGAATTTACCATTCCCCTTACTATTAG GAGATGATTTCCTCGAAGCAAATCAACGAGAGTTGAATTTTAATGGTTCC ACGGCAGAGCTAAAATTAATTGACAGTGTAGAAaataatttagattttat tGATGGCAATGCGAGTGTTTTAAAATTACCATCTTCCAGCCAAATGGTAA CTCCAGATGAACCTCTGGTTTGGACAACTGAAGTCCGGAAATTTCCTCCA CGGACTCTAACAACAATTACCTTACAAACAAATGATAGGttaattgaaga tttttttatatttaattgaaaataacaGTTCAGAAGAAAGCCTTTTGATC ATAACTCCCCAGCTTTCAAGCTGTGAAAATAACAGCCTAACTATTTTCGT GGCGAATCCCTTGAAAAACGAGGTAGAAACTATGCTGTCTCTCGCTACTA CACCAGTAGAGACTGTGAAAGAACCTAATTTTGAAAGACCAAAACAACCT GAATATGAGCCTTACCCCCTAACAGAGGAACAGAAAAAGGAGCTAGAGGA GATACTTGATGAGTATAAAGATGTGTTAGCAAGCAAGGATGATCCCTTAG GTCAAACCGATAGAGTTACACATACAATAGTTACTGAACATGAACAACCC ATTAGGCAGAAACCTTATCGCCTCTCTCCATCCCAAAAGGAAAACCTTGA AGTAGAacttgaaaatcttttgaaaaaggaTATAATACGACCATCTAGTT CAGCTTGGTCGAGCCCGATTGTGTTGATTCCCAAGAGCGATGGTAGTACC CGAGTCTGTATAGACTATCGGAAGCTAAATAAAATTACCATCAAGGACGC GCATCCCCTACCAAAAATTGAAGAGATATTAGATCATCTTAACGGTTCTA AAATATTTACTACGATAGATTTGTTAACCGGTTTTCATCAAATACCAATG GATAAGGAGAGTATTCCTAAGACAGCTTTTGTAACTCACAAAGGCTTGTT TGAATACCTCCGAATGCCTATGGGTCTTACGAACGCGGTAGCGTCCTTTG AGAGGCTAGTTGAACAAGTCTTTGCATTAGAATTATGGGTTTTCCTCTTG CTTTATGTAGATGATTTGATTATCTATTCAAAATCCCCCTCTGAGCATCT AAAACAAATACGTGTAATTTTATCAAGACTACGAGAGAATAAATTACAAG CTAAAGCTAGCAAATGTCGTTTTGCCATGAGACAACTCTCTTTTCTTGGT CATGTTGTAAATGAAAATGGCATATTACCGCTAGATTCTAATACTGCTGC AATCAAAAGCTTTGATTATccgaaaaatgtaaaagaacTACGATCATTTT TAGGAATGAGCTCATACTACCGAAAGTTTATTCCGAATTATGGAAAAATA GCGAGATCTCTGACCACTCTTTTGAAGAAAGATACTCCGTTTCTATTAAC AGATGAAATGAAGAAAGATTTCGAtactttaaaaatgaaattgataACAC CGCCCCTTTTGCGCTACCCCGACTACGAGAAGACGTTTGTTGTAGTTACT GATGCTTCTAAGTATGCTATTGGCCATATAATAGCTCAGGAAGTTTCAGG AAAACACGTCCCCATAAGATACGGTGGTAGAACATTGAAGTCAGCAGAAA TTAACTACACAATATCCGAAAAGGAAGCCTTAGCCTTAGTTCATGCCATT CAGAAAAATCATCATTATCTTTATGGAAGGCCATTCATTGTTTATACTGA TCATCAGCCGCTACGTAATATGGTAAATAGCCCTGAACCGACTGGTAGGA TTTGCAGGTGGGGATTGACCCTCCAGCAATACGACTATGTCGTGAGATAC CTACCTGGAAGTCAAAATGTAGTTGCTGATGCCCTTAGTCGTTTGAATAA TATTCACCCAGACGTTGATGATAACGAAATCCCTAGAGTAAATCTTATTG ATCATGAAAAATCACAACCGATATCATGTGTCATATTGCCTAACGAAGCC ATGGTAACGGAACAAGACAAGGACCCTGATATTAGAAAGATAAAACTAGA ACTAATGGCTAATGACTCCTCCCCTTTACATGACAAATTCGTAATCGATC AAAACTTCTTATTTCGAGTGAATCCGCTTAACACTGATAACGGAAAAAGA CAATATTTCGTTCCTCGTCATAAACATTATGAAATGATTGACAAATTTCA CTCCCCAAATCACATGGGTCATTTCGGAATCAGTAGTACAATCAATAAAC TCGCTGAAAGATATTATTGGAAAGGACTTGCTAGAGATGTTACGCATTTT ATCAATAATTGTACCGATTGTAATATTCACAAAGNACAATCAATAAACTC GCTGAAAGATATATTCGAAAGGACTTGCTAGAGATATTACGCATTTTATC AATAATTGTATCTATAGCAATATTCACAAAAGAAAGACTAATAAAGCTCC TGTCTTTTCTATCCCACTGACCCCGCCTTTTAGTAACATTGTCTGTGATG TCCTTGGCCCATTTACTCCAACAAAAGATGGAAATAGGTACATAATATCG TTTATGGATCGATATTCGTCCTGGCCTGAAGCTTTTgcagtaaaatcaaa aattctgaTATGATACTATGACAGCCCAACCAAGTGAAAAACCATGATTA CGTCGACATTAAACCTATATCTGAGCCTGTCACTATACAGAAAATAGGTA ATTATATCCATATTCCCTCACTAGAAATAGGAGGTGAGATCTCGTTCAAT CATCCTTTGAGTTCCCATGAGACCACTACTAAAGGTAAATGGTTTACACT TGATAATGGTATCATTATCGAGGGCAACGGAACTCGATTTGATTATAGAC AAGCCTCCTTCaaaaagatagtatttcttGCCAAAAAGTTTTCTAGAGAA CAAGGACTTCCCTTGGTACAGGCGCACCtaattgaaaatttgataaacat aAAAGAACAAACCTTACACGAGGCAAAGCGAACATGTTTTATTCAAAAGG AGATTAGGTCTATTCACCAATGGCTTTCCAACCATTTTCCTGACTTGGTC GCAGAATTGGTATTTGGCAGAAATGACATAGTTGCTCACCCAGCTGGTGA TGCATATGAAGTCAGTGAATGCCGTCCCGTCCATTATACTTGTGTAAAAC TGGATAGGAGGTCTAATAATACCAAGCTGAACAACTCTTGTTTCCAATAT TTCCCTTTACAAACTCCGGATTCTGACGTCACGCAATATATTCAAATACC TTCACGTAGAGCTCATTTTCATTCTCCACAAATAAATTGCGATGACTTGC CCAAACAAACAGTGCTGCAAACAAACCAAGGTCCGATTGCCGTTAGCCCA AATGGTCATTATAAAATGATTAACCTAACAAAATCTTCGTACTCCCCAAA ACTATGGATGACTCCTTTAAAACACACATATGGATATTCATCTAGAATAT TCATAGATACACCAAAAAGAATAGAACCATATcctcttcttggaataatg tctCAAGTCCATGAAAGCATGAGACAACTACAAGAAAAGGTTGATCAAAC TTCCCAACACTCATCCCCTGACATCTTCAGCAGCATTACCTCGGCAATAG GCACGTTGTTGGAATCAGCTGGTGCTGGAACAAGTAAAGTAATCAGTAGC TTGGGTACCAGCATAAAAGCTGCTGCTGAAGGTGCAGGAACGCTAGGAAA AGATGTGATTTCCAGCTCGGGTGAGGCGTTGGCAGAAACTATTCAGGCAA GTGGATCTGCCATCAAAGACGTGGAAGATGGTAGTGCGAACATCATAGAC AGTATATTGGGTGGAATCCACGGAATATTGGGCATGACCGCTTTGTTGCT TGCAGTTTTGGTGGCAACGTATCTTGCTTATCAAAAACATCAAGAAAGAA AGGAGAAGTCCAAGAAGAAACAGCAGATGATCGAAGGAATAGTAGCCGAT CCAGTATTGCTACAAAGATTGATGGAGCAGTTGGAAGAGTCAGGATTATG AAATCCTATATGTAACCTATTTAAATCTATTCTATTCAACGGCATAAGTT AACTTATCGTATTATCTACCAACTAATCATGATTAACACGTTATCGTATG AAGCTTCACCTTTCTCTTTATATGTTCTAACAAATTTAGTCTTACAACTC AATCTAGTTACTAAATCGATTCGCAATGGAGATGGTTGAAGAATTCGTGT TCGATGTAGACGAAACATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNTTTACATAACTTGGAGTAGTATGTCCTTAAGA CAGTGCTCATTTCCTACAGTTCGTTCGTAATTCCGATCATCTAAGACATA AGAAAGCGGTGTGGACCTTCAACACAGTCAcaatcacaaaaacaaaatca agaattgaaaaattggacatCCATTGGAATCGAACTCGGAACCCCATGCA CATGAGACAGACGATCTAACTGCTTGAGCCAACCACGCTTTGTAGGTAGT GAGGGAAAGCgtgaactgataagaaagaaaaaggaaagaaagaaatgaga agaaaattaattcccgctttgatgttattatcgaaacaaaaggatcagtc atgccgaaATTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNtttccacacgtcagcaatctagtttctataaata tgaaaactagattgtaaggaagattctaaaaaataatagctgttttctta gacgactacgttaactataaagtgcactcacAATCAttaatttgtcagat ctaacaaaatgaataatgaaaatgtCATCAAAGGACAATCAAACGAAGGA TTTTCCGTCAAGAACCTTGAAAatattccaacaacttccatcaaaatgat ctgcCGCAGAAAAGTTctactattttgaaaaaaaaaccttaaaaacaaCA TATGCTGTTTGAGAATTTGTCTGGGTTGACAATACAAACTATCTCACgac tgaaaaaattttaatctgtcaatcattttctcaagcgaagagtacaaGAA Acaattctagctttacaatagtgtcacagatcatcagtggatagtgttca attattattattcctttattttcatttgtggaattttcacaaaaaaaggt aaaatacaaaagttgtattttttactgctctattcacatactgcaTTTGA AAGATATTCTATATAGCGTTTTTttacaaacttcaaaaaactgatttttg tctgGCTTTTGCAGGACTTTAGCTTTAAGTGCTTAAATGCAACATTGGGT ACAAAGTCCCAATTTGTCTATGTAAATTCTGGTGAATTTTGTGTGAAAAG TTAGGGTTATACTATTTTGTTTGCAACAACAATAACAAGAGTTGCAAAGT TCCAAATTCCAAGTCAATTACATAAAAATTAGaaacttgaaataaaataa aagaacacATTATTAATGTGTGTCAGCCTGCTAATCAATGGACCAAAATG TATTATCAATATTACCAAGACGGACTTTGGGAGAATGTTACGGGCTATAG ACCTTTTTGTAGCATCTAGGTGCAATGTCATGTtggataattaaaaactc cagcaccaaaacaatgataagaaaaaaattagtgCGCACTCATTATGCAT TAATGTGTCATTGCAGGTATTTGTGTtaatgctggattttttaattACCC AACGTGACACCGATCAAAAGGTCTACTTATTAAGCCTCAGCCTGTACAAA TGATATAATGGTTCAAAAGGGCCAGATTATTTTCTCATAATTTAATTTAT AAGTTTTACAGTGCATTATTGTTGCTTTTATGTCAAGTAAATGATCTGGA AAGATAAATaatgtatttttattgtttttgtttcagAGATTGATTACAGT GAGAAAAGCAGGCATTGTCCATATCTTGATACAATCAACAGGTAAAggct gttgtttttgtttgtaaatTTACAATATctactgaaatatttttttacat caTAGATAAGAAATTGTAAGTTAGACCAATCGGAAATCAATCTATTCaat ctttttgtttataaaacaaGAAAACATACCATCTTATGTATCGTATGTTT TCATAGACAATCAATACAATTTGAAGAACGTTTTAAAGGAAATCATTTTG TTGATTAAAGATAAagtcaaattgaaaaaaatatatgattAGGCACATGT TAAAATCACTTTCTGTCAGCAAATTTTATTGATCAAACAGTTTTTATTGA CtgtcaatatattcttttagttttcaagaaaattgatttacAGTCAATGT AAAATTATTTATGTTAATAATTTGTACATATTTAACAGTCAATACAATTG TTAATGCTCATAAAAACTTAATGGCAGTCAGtgaaaaacattgaacatgC CAAATCAACGTTTTTTGAGCAGGTACACTACTACACTCTTTACCTACATG GTGACTATTGATAatgaataataataatgaagtttctattttcagaactg ttttggattttgattttgagaaacTCTGCTGTGTTTCTCTGTCTCATCTC AATGTTTATGCATGTCTTGTTTGTGGAAAATACTTTCAAGGTAGTTTATA TTTGTCTTTCAAGACCAATCTCTGGTTCGATTTTATTGCATCTTCTAACC TAGAGAGAATCTAGGATATTGCATCTTTCATTCATAGTACTATAAGagag aaaaaatttctttcttattaATTTTCCCTTGGTTGTAGAAACTTCTTCCT TTGTAAAGTGAATTGTAAGCCTCCTGGTTCAGGAGAATTTAAAGATTCAC CAATTCACCAAggttttactttttatattGTTACACAGCCAAAtgtcaaa ttctttttttaatttaaagaaTTTCCACGTTTCAGGAAGAGGTCAGAATT CTCATGCTTATACACACAGTGTTCATATTGGACATCATGTTTATTTAAAT TTACACACATTGAAGGTATGttgttaaaataattttctcatcTCAGGATT CTTCAGTATGTCATTATTCTGTCATTCATCTTGGAAAGTATGCATAGTTT TTGTGGTAGTTGTTGTTGTTACTGTATTGCTATCAACAATATTTTGCTAC AAAGTTAAAGTCACAGGATTCATCTTCTACTTttattgaataaattttag aaTGTTTTACCCTTTTTATAGTTTTACTGTTTACCGGATAATTACGAAAT TATTGATTCATCCCTGGAAGAtataaaggtttgt

Coding sequence (CDS) from alignment at scaffold_284:1093845..1114928+

>TCONS_00056885 ID=TCONS_00056885|Name=TCONS_00056885|organism=Clytia hemisphaerica|type=CDS|length=2220bp|location=Sequence derived from alignment at scaffold_284:1093845..1114928+ (Clytia hemisphaerica)
ATGTGCGCGAAAatgaaattcaagatggcggcgatAAAAACAGAACCTGA
GGAGTTTGAGGAACCGAATTTGAAACGTCTTCATGGTTTGGTTGACAATA
CATATGATAGTGATGATGAAGATATCAAAGAAATCAAGCCCAAGATAGAG
AAGATTGATTACAGTGAGAAAAGCAGGCATTGTCCATATCTTGATACAAT
CAACAGaactgttttggattttgattttgagaaacTCTGCTGTGTTTCTC
TGTCTCATCTCAATGTTTATGCATGTCTTGTTTGTGGAAAATACTTTCAA
GGAAGAGGTCAGAATTCTCATGCTTATACACACAGTGTTCATATTGGACA
TCATGTTTATTTAAATTTACACACATTGAAGTTTTACTGTTTACCGGATA
ATTACGAAATTATTGATTCATCCCTGGAAGAtataaaggtttgtATGTGC
GCGAAAatgaaattcaagatggcggcgatAAAAACAGAACCTGAGGAGTT
TGAGGAACCGAATTTGAAACGTCTTCATGGTTTGGTTGACAATACATATG
ATAGTGATGATGAAGATATCAAAGAAATCAAGCCCAAGATAGAGAAGATT
GATTACAGTGAGAAAAGCAGGCATTGTCCATATCTTGATACAATCAACAG
aactgttttggattttgattttgagaaacTCTGCTGTGTTTCTCTGTCTC
ATCTCAATGTTTATGCATGTCTTGTTTGTGGAAAATACTTTCAAGGAAGA
GGTCAGAATTCTCATGCTTATACACACAGTGTTCATATTGGACATCATGT
TTATTTAAATTTACACACATTGAAGTTTTACTGTTTACCGGATAATTACG
AAATTATTGATTCATCCCTGGAAGAtataaaggtttgtATGTGCGCGAAA
atgaaattcaagatggcggcgatAAAAACAGAACCTGAGGAGTTTGAGGA
ACCGAATTTGAAACGTCTTCATGGTTTGGTTGACAATACATATGATAGTG
ATGATGAAGATATCAAAGAAATCAAGCCCAAGATAGAGAAGATTGATTAC
AGTGAGAAAAGCAGGCATTGTCCATATCTTGATACAATCAACAGaactgt
tttggattttgattttgagaaacTCTGCTGTGTTTCTCTGTCTCATCTCA
ATGTTTATGCATGTCTTGTTTGTGGAAAATACTTTCAAGGAAGAGGTCAG
AATTCTCATGCTTATACACACAGTGTTCATATTGGACATCATGTTTATTT
AAATTTACACACATTGAAGTTTTACTGTTTACCGGATAATTACGAAATTA
TTGATTCATCCCTGGAAGAtataaaggtttgtATGTGCGCGAAAatgaaa
ttcaagatggcggcgatAAAAACAGAACCTGAGGAGTTTGAGGAACCGAA
TTTGAAACGTCTTCATGGTTTGGTTGACAATACATATGATAGTGATGATG
AAGATATCAAAGAAATCAAGCCCAAGATAGAGAAGATTGATTACAGTGAG
AAAAGCAGGCATTGTCCATATCTTGATACAATCAACAGaactgttttgga
ttttgattttgagaaacTCTGCTGTGTTTCTCTGTCTCATCTCAATGTTT
ATGCATGTCTTGTTTGTGGAAAATACTTTCAAGGAAGAGGTCAGAATTCT
CATGCTTATACACACAGTGTTCATATTGGACATCATGTTTATTTAAATTT
ACACACATTGAAGTTTTACTGTTTACCGGATAATTACGAAATTATTGATT
CATCCCTGGAAGAtataaaggtttgtATGTGCGCGAAAatgaaattcaag
atggcggcgatAAAAACAGAACCTGAGGAGTTTGAGGAACCGAATTTGAA
ACGTCTTCATGGTTTGGTTGACAATACATATGATAGTGATGATGAAGATA
TCAAAGAAATCAAGCCCAAGATAGAGAAGATTGATTACAGTGAGAAAAGC
AGGCATTGTCCATATCTTGATACAATCAACAGaactgttttggattttga
ttttgagaaacTCTGCTGTGTTTCTCTGTCTCATCTCAATGTTTATGCAT
GTCTTGTTTGTGGAAAATACTTTCAAGGAAGAGGTCAGAATTCTCATGCT
TATACACACAGTGTTCATATTGGACATCATGTTTATTTAAATTTACACAC
ATTGAAGTTTTACTGTTTACCGGATAATTACGAAATTATTGATTCATCCC
TGGAAGAtataaaggtttgt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035838XLOC_035838Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056885-proteinTCONS_00056885-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056885-exon-scaffold_284-1491911889:1093845..1094056TCONS_00056885-exon-scaffold_284-1491911889:1093845..1094056Clytia hemisphaericaexon
TCONS_00056885-exon-scaffold_284-1510915933:1093845..1094056TCONS_00056885-exon-scaffold_284-1510915933:1093845..1094056Clytia hemisphaericaexon
TCONS_00056885-exon-scaffold_284-1575043694:1093845..1094056TCONS_00056885-exon-scaffold_284-1575043694:1093845..1094056Clytia hemisphaericaexon
TCONS_00056885-exon-scaffold_284-1491911889:1113581..1113635TCONS_00056885-exon-scaffold_284-1491911889:1113581..1113635Clytia hemisphaericaexon
TCONS_00056885-exon-scaffold_284-1510915933:1113581..1113635TCONS_00056885-exon-scaffold_284-1510915933:1113581..1113635Clytia hemisphaericaexon
TCONS_00056885-exon-scaffold_284-1575043694:1113581..1113635TCONS_00056885-exon-scaffold_284-1575043694:1113581..1113635Clytia hemisphaericaexon
TCONS_00056885-exon-scaffold_284-1491911889:1114190..1114284TCONS_00056885-exon-scaffold_284-1491911889:1114190..1114284Clytia hemisphaericaexon
TCONS_00056885-exon-scaffold_284-1510915933:1114190..1114284TCONS_00056885-exon-scaffold_284-1510915933:1114190..1114284Clytia hemisphaericaexon
TCONS_00056885-exon-scaffold_284-1575043694:1114190..1114284TCONS_00056885-exon-scaffold_284-1575043694:1114190..1114284Clytia hemisphaericaexon
TCONS_00056885-exon-scaffold_284-1491911889:1114580..1114659TCONS_00056885-exon-scaffold_284-1491911889:1114580..1114659Clytia hemisphaericaexon
TCONS_00056885-exon-scaffold_284-1510915933:1114580..1114659TCONS_00056885-exon-scaffold_284-1510915933:1114580..1114659Clytia hemisphaericaexon
TCONS_00056885-exon-scaffold_284-1575043694:1114580..1114659TCONS_00056885-exon-scaffold_284-1575043694:1114580..1114659Clytia hemisphaericaexon
TCONS_00056885-exon-scaffold_284-1491911889:1114866..1114928TCONS_00056885-exon-scaffold_284-1491911889:1114866..1114928Clytia hemisphaericaexon
TCONS_00056885-exon-scaffold_284-1510915933:1114866..1114928TCONS_00056885-exon-scaffold_284-1510915933:1114866..1114928Clytia hemisphaericaexon
TCONS_00056885-exon-scaffold_284-1575043694:1114866..1114928TCONS_00056885-exon-scaffold_284-1575043694:1114866..1114928Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_284supercontigscaffold_284:1093845..1114928 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
45.6656 39.0378 81.9679 84.1759 16.6824 17.411 15.3041 21.9127 20.2523 24.864 17.1218 15.2028 13.8156 14.487 17.2189 20.8157 23.4838 22.5946 4.96232 7.99958 20.8593 24.249 33.2571 36.4825 15.0359 19.4578 22.187 13.8563 25.9413 23.8548
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001607Znf_UBP
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008270 zinc ion binding
Blast
BLAST of TCONS_00056885 vs. Swiss-Prot (Human)
Match: SNUT2 (U4/U6.U5 tri-snRNP-associated protein 2 OS=Homo sapiens GN=USP39 PE=1 SV=2)

HSP 1 Score: 171.014 bits (432), Expect = 4.619e-50
Identity = 76/90 (84.44%), Postives = 81/90 (90.00%), Query Frame = 2
Query:  227 EKSRHCPYLDTINRTVLDFDFEKLCCVSLSHLNVYACLVCGKYFQGRGQNSHAYTHSVHIGHHVYLNLHTLKFYCLPDNYEIIDSSLEDI 496
             +SRHCPYLDTINR+VLDFDFEKLC +SLSH+N YACLVCGKYFQGRG  SHAY HSV   HHV+LNLHTLKFYCLPDNYEIIDSSLEDI
Sbjct:  100 RRSRHCPYLDTINRSVLDFDFEKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 189          
The following BLAST results are available for this feature:
BLAST of TCONS_00056885 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SNUT24.619e-5084.44U4/U6.U5 tri-snRNP-associated protein 2 OS=Homo sa... [more]
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