Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056905 ID=TCONS_00056905|Name=TCONS_00056905|organism=Clytia hemisphaerica|type=transcript|length=1125bp CGAAGGGGGAGGGGGACTTTGctgtttgcgaggtgacggaaGCTCAAGTT CGAGAATCGACCCTGTATGAGATTGAGTCTATCTAAGGCCGGGGGGGgga ctgaccttgacggccgacggagATGTCTTGAATTTAGTATTATttggaac aattttttttgaaaaatatttttccaaacaatTTGTTTCTTCGTTTTCAT TACATTTTAACATGACAACGCTCGGCCACCATATACAGATGGTTATGACA TGTCTCCTTAGCATCCAGCATCCAGCGTGTACAAAATCAACGAAATGAAG TCGTGAATTCATCTGTTCCACGTGCGAGatcaagaaacaacaaaaataaa acggAAAAGGTaatgacaaaatttgaaatcgatgattataattctttttt aaattctaccGACTCGACCGTTTTGTTACGAATAAATAACAATACCCCTT TTGTATTTTAATATAATATACGCTGTGTTAATACGCTGTGAGGCTGAAAG GATAAATAGTGTGGGTGTGGAACAGTTTTGATCATTCTGAAATTGTCTTC GAGAAGAACAGTTGGATCACGAAACAGCAAGCATGAAGTCAACAACAATC ATCATTTTCGCCGCCATTTTGGCTATGTGTTTGGTTGCCGAGGGCAACCC AATGGATGAAAGCGAAAGCAGACCGGAAATGAACTTTGAGGATGAATTTG ACGGGGGAATTTACGCGGATCCAATTTACGAGGATGTTGAAAATGACGAA GATTCGGAcgaaaaaccaaagaaaatttgTGTCGCTCACTGCAACGGATG GTTCTTCGGATGAATTAACCAATCACATTAGACTTTCAAATCATCAAGAA CACTTCAGtaatttataatatattttctttttgtagaATATATTCGCCAT TATGGGAATAAGTTCATGTTATAAATGTTTCTTCTGTTCCATATAAATGT ACAAGTTCCACCCTGGTCTAGATTAAATTGTCCATAACTCTAATTTCGGT CACCCATAGAGATGCAAAATACGATAAAAAAGAAACTATTCCAAAATTTT AATCAACACTAAGTGATaattttatggacctacctggttatcaaaactaa tcaatgaatattaaaacaatgaaac Run BLAST on NCBI transcript from alignment at scaffold_284:1434842..1436358+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056905 ID=TCONS_00056905|Name=TCONS_00056905|organism=Clytia hemisphaerica|type=transcript|length=1517bp|location=Sequence derived from alignment at scaffold_284:1434842..1436358+ (Clytia hemisphaerica) CGAAGGGGGAGGGGGACTTTGctgtttgcgaggtgacggaaGCTCAAGTT
CGAGAATCGACCCTGTATGAGATTGAGTCTATCTAAGGCCGGGGGGGgga
ctgaccttgacggccgacggagATGTCTTGAATTTAGTATTATttggaac
aattttttttgaaaaatatttttccaaacaatTTGTTTCTTCGTTTTCAT
TACATTTTAACATGACAACGCTCGGCCACCATATACAGATGGTTATGACA
TGTCTCCTTAGCATCCAGCATCCAGCGTGTACAAAATCAACGAAATGAAG
TCGTGAATTCATCTGTTCCACGTGCGAGatcaagaaacaacaaaaataaa
acggAAAAGGTaatgacaaaatttgaaatcgatgattataattctttttt
aaattctaccGACTCGACCGTTTTGTTACGAATAAATAACAATACCCCTT
TTGTATTTTAATATAATATACGCTGTGTTAATACGCTGTGAGGCTGAAAG
GATAAATAGTGTGGGTGTGGAACAGTTTTGATCATTCTGAAATTGTCTTC
GAGAAGAACAGTTGGATCACGAAACAGCAAGGTCAGTCTATATAACTTCT
TTTTTTGTGAGTTTGAAGTACCAAAAAGGGAGTGGTGATACCTAAGACAC
ACGACCGTGAAAAATTCGAGACCCCTGGTAAATACATTAATAAGATCCCT
TTAAACGAATTGGTGCTTTTAGTTAATTCTCATTACCAAATTGATGGGTT
GatgaaaattttataattataaCGTTTATTGAAGTAAAGGGTTGACAGAT
ATCTCTCAAATTTTTAGCATGAAGTCAACAACAATCATCATTTTCGCCGC
CATTTTGGCTATGTGTTTGGTTGCCGAGGGCAACCCAATGGATGAAAGCG
AAAGCAGACCGGAAATGAACTTTGAGGATGAATTTGACGGGGGAATTTAC
GCGGATCCAATTTACGAGGATGTTGAAAATGACGAAGATTCGGAcgaaaa
accaaagaaaatttggtgAGTTTTCCATAAAACGTACAACAAAAGCAACC
ATTTTTGTCTGTAAAGCAATAGCCTGCCGAGGATGCATGTGCCTAAATTT
AACTAGTTCCTATAAAAAGGGTTCATAATATTCCttgatattcaaaatat
ttttctcctttttgtttTTAGTGTCGCTCACTGCAACGGATGGTTCTTCG
GATGAATTAACCAATCACATTAGACTTTCAAATCATCAAGAACACTTCAG
taatttataatatattttctttttgtagaATATATTCGCCATTATGGGAA
TAAGTTCATGTTATAAATGTTTCTTCTGTTCCATATAAATGTACAAGTTC
CACCCTGGTCTAGATTAAATTGTCCATAACTCTAATTTCGGTCACCCATA
GAGATGCAAAATACGATAAAAAAGAAACTATTCCAAAATTTTAATCAACA
CTAAGTGATaattttatggacctacctggttatcaaaactaatcaatgaa
tattaaaacaatgaaac
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00056905-exon-scaffold_284-1491911889:1434842..1435422 | TCONS_00056905-exon-scaffold_284-1491911889:1434842..1435422 | Clytia hemisphaerica | exon |
TCONS_00056905-exon-scaffold_284-1510915933:1434842..1435422 | TCONS_00056905-exon-scaffold_284-1510915933:1434842..1435422 | Clytia hemisphaerica | exon |
TCONS_00056905-exon-scaffold_284-1575043694:1434842..1435422 | TCONS_00056905-exon-scaffold_284-1575043694:1434842..1435422 | Clytia hemisphaerica | exon |
TCONS_00056905-exon-scaffold_284-1491911889:1435659..1435856 | TCONS_00056905-exon-scaffold_284-1491911889:1435659..1435856 | Clytia hemisphaerica | exon |
TCONS_00056905-exon-scaffold_284-1510915933:1435659..1435856 | TCONS_00056905-exon-scaffold_284-1510915933:1435659..1435856 | Clytia hemisphaerica | exon |
TCONS_00056905-exon-scaffold_284-1575043694:1435659..1435856 | TCONS_00056905-exon-scaffold_284-1575043694:1435659..1435856 | Clytia hemisphaerica | exon |
TCONS_00056905-exon-scaffold_284-1491911889:1436013..1436358 | TCONS_00056905-exon-scaffold_284-1491911889:1436013..1436358 | Clytia hemisphaerica | exon |
TCONS_00056905-exon-scaffold_284-1510915933:1436013..1436358 | TCONS_00056905-exon-scaffold_284-1510915933:1436013..1436358 | Clytia hemisphaerica | exon |
TCONS_00056905-exon-scaffold_284-1575043694:1436013..1436358 | TCONS_00056905-exon-scaffold_284-1575043694:1436013..1436358 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_284 | supercontig | scaffold_284:1434842..1436358 + |
Blast
The following BLAST results are available for this feature:
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