Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056925 ID=TCONS_00056925|Name=TCONS_00056925|organism=Clytia hemisphaerica|type=transcript|length=385bp TGATTTGGCAATCACTGCTTCAAACTCCAAAGATTCGAAATCATTAGACG TGAAAAAAGGTGATTTCAAAACTGGTGTTTCTTCAAACAAGGACAAAGAA ACAGGTCAAAGAACTACTTCAGCAAGCATCAATAAAGGCGATTTGGCAAT CACTGCTTCAAACTCCAAAGATTCGAAATCATTAAACGTGGAAAAAGGCG ATTTTAAAACTGGTGTTTCTTCAAACAAGGACAAAGAAACAGGTCAAAGA AATACTTCAGCAAACATCAACAAAGGCGATTTGGTAATCACTGCTTCAAA CTCCAAAGATTCGAAATCATTAAACATGGAAAAAGGCGATTTTAAAACTG GTGTTTCTTCAAACAAGGACAAAGAAACAGGTCAA Run BLAST on NCBI protein sequence of TCONS_00056925-protein >TCONS_00056925-protein ID=TCONS_00056925-protein|Name=TCONS_00056925-protein|organism=Clytia hemisphaerica|type=polypeptide|length=128bp
DLAITASNSKDSKSLDVKKGDFKTGVSSNKDKETGQRTTSASINKGDLAI TASNSKDSKSLNVEKGDFKTGVSSNKDKETGQRNTSANINKGDLVITASN SKDSKSLNMEKGDFKTGVSSNKDKETGQ Run BLAST on NCBI transcript from alignment at scaffold_284:454205..455183- Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056925 ID=TCONS_00056925|Name=TCONS_00056925|organism=Clytia hemisphaerica|type=transcript|length=979bp|location=Sequence derived from alignment at scaffold_284:454205..455183- (Clytia hemisphaerica) TGATTTGGCAATCACTGCTTCAAACTCCAAAGATTCGAAATCATTAGACG
TGAAAAAAGGTGATTTCAAAACTGGTGTTTCTTCAAACAAGGACAAAGAA
ACAGGTCAAAGAACTACTTCAGCAAGCATCAATAAAGGTGATATGGCAAT
CACTGCTTCAAATTCAAATCCTTAAACGGTGCATCTAGACGATTCACAAC
TGGCTTTGCTTTGATGAATGATACAGAAAGAGATTACAAATTGTTTTTTT
CCATCGTAATTTATACCTTTTCCCCGGGGGCAGTGGGTTTACCAACTGAC
GGTATGTGCGGTGAAAAAATTGGCTTTTAGAATTGCATCCTTACAGTGCA
CAAAGAAATCGGTGAAATTCATACCCTTACAGTGCATTTTTCAAATTTTC
AAACTCTTTTAGAGCAAAAAAATCATCATTTTCGAGCAAAAATTTGCAAT
TTTTCTCCAGATTTGCTGAAATTTTCACCCTTACAGTGCATTTATCAAAA
GTCCACCCTTACAGTGCATTTCTGATATTTTGAAAAACATACCCTTAACC
GCCGCACATACCCGTCNAAAAACAGGTCAAAGAACTACTTCAGCAAACAT
CAACAAAGGCGATTTGGCAATCACAGCTTCAAACTCTAAAGATTCGAAAT
CATTAAACGTGGAAAAAGGCGTTTCTTCAAACAAGGACAAAGAATCAGGT
CAAAGAACTACTTCAGCAAACATCAACAAAGGCGATTTGGCAATCACTGC
TTCAAACTCCAAAGATTCGAAATCATTAAACGTGGAAAAAGGCGATTTTA
AAACTGGTGTTTCTTCAAACAAGGACAAAGAAACAGGTCAAAGAAATACT
TCAGCAAACATCAACAAAGGCGATTTGGTAATCACTGCTTCAAACTCCAA
AGATTCGAAATCATTAAACATGGAAAAAGGCGATTTTAAAACTGGTGTTT
CTTCAAACAAGGACAAAGAAACAGGTCAA Coding sequence (CDS) from alignment at scaffold_284:454205..455183- >TCONS_00056925 ID=TCONS_00056925|Name=TCONS_00056925|organism=Clytia hemisphaerica|type=CDS|length=768bp|location=Sequence derived from alignment at scaffold_284:454205..455183- (Clytia hemisphaerica) GCGATTTGGCAATCACTGCTTCAAACTCCAAAGATTCGAAATCATTAAAC GTGGAAAAAGGCGATTTTAAAACTGGTGTTTCTTCAAACAAGGACAAAGA AACAGGTCAAAGAAATACTTCAGCAAACATCAACAAAGGCGATTTGGTAA TCACTGCTTCAAACTCCAAAGATTCGAAATCATTAAACATGGAAAAAGGC GATTTTAAAACTGGTGTTTCTTCAAACAAGGACAAAGAAACAGGTCAAGA TTTGGCAATCACTGCTTCAAACTCCAAAGATTCGAAATCATTAGACGTGA AAAAAGGTGATTTCAAAACTGGTGTTTCTTCAAACAAGGACAAAGAAACA GGTCAAAGAACTACTTCAGCAAGCATCAATAAAGGCGATTTGGCAATCAC TGCTTCAAACTCCAAAGATTCGAAATCATTAAACGTGGAAAAAGGCGATT TTAAAACTGGTGTTTCTTCAAACAAGGACAAAGAAACAGGTCAAAGAAAT ACTTCAGCAAACATCAACAAAGGCGATTTGGTAATCACTGCTTCAAACTC CAAAGATTCGAAATCATTAAACATGGAAAAAGGCGATTTTAAAACTGGTG TTTCTTCAAACAAGGACAAAGAAACAGGTCAAGATTTGGCAATCACTGCT TCAAACTCCAAAGATTCGAAATCATTAGACGTGAAAAAAGGTGATTTCAA AACTGGTGTTTCTTCAAACAAGGACAAAGAAACAGGTCAAAGAACTACTT CAGCAAGCATCAATAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00056925-exon-scaffold_284-1575043694:455047..455183 | TCONS_00056925-exon-scaffold_284-1575043694:455047..455183 | Clytia hemisphaerica | exon |
TCONS_00056925-exon-scaffold_284-1575043694:454205..454452 | TCONS_00056925-exon-scaffold_284-1575043694:454205..454452 | Clytia hemisphaerica | exon |
TCONS_00056925-exon-scaffold_284-1510915933:455047..455183 | TCONS_00056925-exon-scaffold_284-1510915933:455047..455183 | Clytia hemisphaerica | exon |
TCONS_00056925-exon-scaffold_284-1510915933:454205..454452 | TCONS_00056925-exon-scaffold_284-1510915933:454205..454452 | Clytia hemisphaerica | exon |
TCONS_00056925-exon-scaffold_284-1491911889:455047..455183 | TCONS_00056925-exon-scaffold_284-1491911889:455047..455183 | Clytia hemisphaerica | exon |
TCONS_00056925-exon-scaffold_284-1491911889:454205..454452 | TCONS_00056925-exon-scaffold_284-1491911889:454205..454452 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_284 | supercontig | scaffold_284:454205..455183 - |
Blast
The following BLAST results are available for this feature:
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