TCONS_00056929 (transcript) - C. hemisphaerica

Overview
NameTCONS_00056929
Unique NameTCONS_00056929
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1980

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00056929 ID=TCONS_00056929|Name=TCONS_00056929|organism=Clytia hemisphaerica|type=transcript|length=1980bp
catatttACTTAACTTGGAAAATACTAAacagAAAGATAAAATCAAGATC
TCAATTGTGGTGCAATCAGATGATTTATCAATACGAACAAATCTATTGGA
AAGCACATTTACCAGTTTAACAAAATTCACACTGACTGCACCAAATATCA
CATTATACAAATCGCAAATTGATAAAACACAAGATGGGGTCAATCTAGAT
TTGGTTTCAACAGGAACGTTAAGAATATCATCACACCCATTGGCCGTCAG
AAATGTTTCATTGACTGTGTTACCACtttctgaagaagaaaaagaATCAA
CTTCAACTTGTTCCAATGACATTTTCATCGACGCTGGTGCTTTAGTGAAA
TGCATTTTCATTGAAACCAACATCTTCAACACTGCTGGTCATGTCTTTAT
CAATGGCACCTTAACAGCTGGTTACTTTGGCGAAGATTTGAacgtcaaaa
tcaaatcaagtgATCTTCACATTGGCATCGATGCAATTGTTGGTCACAAC
TCAGTTGAAAATCAATCTAAAAGATCAATCAATGACCATAAACATTGgtt
aaaaacaaaagttttaaatcTTCATATTCATGATGGTGGCTTAACAAATT
TCGGATCACTAATAGCTACAGATTGTATCAAATTAAATGCAAATGGATTG
TCGCTTTGCTCAGACTCTAAACGTGATACTGCACATCGCGGATTAGATGG
TTTTATTGGTATCAAGAAAGATCAAGGGTTCATTGATAATGCGATTAAGC
CGAAGAAAAAGAGAACCTCGTCGTTCAATGATGATCGAATGATTCAAGCT
GTTCATAACTCTAATTGCCAGAATTTTCTTTCCATTGTCAAAGAAGGTGT
AGATCCTAACATCTTGGTCGACGGGAGACGAGTGTCTGACGAGGTTGAAA
TTCAACGAAAAAATGTTGGATTATCAGATcaagaaaatttggaaatcATA
CGTACTGGACTACATTTAAATGATTGGAAACATGGTATGATCAAAGCACC
AATTATCGAATGCACAGTTACTGGTGATATTGAGGACTGTTCACAGATCC
AAGGTAGTGATATACGTTTCAATGTTGGTGGTTGTGTCATCATTACTATA
CCTTGGACATGGATTTCCAAAGATATCAGTGGACAAATCAGgggaaattt
aattttcaatgataatgCTATTATTGGTTGTTTCAAAGACCTTCAGGTTC
TTGGTAATGTTGTGATCTCCAACACATCCACTTTGTACATCCAAAGAGGG
GGCCGTTTATACTGCGCAAAAGCATTAGTGAACAGCAATGAAATCATATG
CGAAGGAGATCTTCAATTAGATGTTGCTCACATAAAGCAAACCGATGAAG
GATTGATTATCAACAAAGGTGATTTGCTGGTAAATGTACATGATGTACGT
GAACAACAAGAGCAAACCGATGAAGGATTGATTATCAACAAAGGTGATTT
GCTGAAAGGTGATTGGTTCGGCAATATCCTGGTACACAATCATTTTTTCC
TCCAACTTCAGAAGAAAGTTGTTATTGATGCTCACGTTATATGCAAAGAA
TGTACTGTTCAATTCTTTGGGCCAGAATCTCAGTTGGAGATCAACGGAAC
ATGGATTGTAGACGTTGGTGTTTTGAATCTTGAAGCCGATGAACATGCTA
GTGATGGTGAAATTCCAAATCTAGTTCTGGTTGGTCAGCTCTTTGCCAAG
GGTATTGAAGGAATGACAGCTTCCATTGAAACAGAACCTGGTGCACTTTG
CCTTCTGACAGAAAGTATAGATCCAGCTGTCAATGGAATCAATCTCGATG
TCAAATGGATGAAGATAAAATCTGATTCTGTGATAAGCTGTACTGGAGCT
CCAGAGAATTCCAAGATGTCAAACACTGTGAATGTCAATTGCCAAGAGGA
GTTGACCATCTTTGGTGAACTTCGAATCGCTGGTATAAATCACTCAAACA
TTCATACACAATCATTGAAGAACTCTGGCC
Run BLAST on NCBI

protein sequence of TCONS_00056929-protein

>TCONS_00056929-protein ID=TCONS_00056929-protein|Name=TCONS_00056929-protein|organism=Clytia hemisphaerica|type=polypeptide|length=659bp
YLLNLENTKQKDKIKISIVVQSDDLSIRTNLLESTFTSLTKFTLTAPNIT
LYKSQIDKTQDGVNLDLVSTGTLRISSHPLAVRNVSLTVLPLSEEEKEST
STCSNDIFIDAGALVKCIFIETNIFNTAGHVFINGTLTAGYFGEDLNVKI
KSSDLHIGIDAIVGHNSVENQSKRSINDHKHWLKTKVLNLHIHDGGLTNF
GSLIATDCIKLNANGLSLCSDSKRDTAHRGLDGFIGIKKDQGFIDNAIKP
KKKRTSSFNDDRMIQAVHNSNCQNFLSIVKEGVDPNILVDGRRVSDEVEI
QRKNVGLSDQENLEIIRTGLHLNDWKHGMIKAPIIECTVTGDIEDCSQIQ
GSDIRFNVGGCVIITIPWTWISKDISGQIRGNLIFNDNAIIGCFKDLQVL
GNVVISNTSTLYIQRGGRLYCAKALVNSNEIICEGDLQLDVAHIKQTDEG
LIINKGDLLVNVHDVREQQEQTDEGLIINKGDLLKGDWFGNILVHNHFFL
QLQKKVVIDAHVICKECTVQFFGPESQLEINGTWIVDVGVLNLEADEHAS
DGEIPNLVLVGQLFAKGIEGMTASIETEPGALCLLTESIDPAVNGINLDV
KWMKIKSDSVISCTGAPENSKMSNTVNVNCQEELTIFGELRIAGINHSNI
HTQSLKNSG
Run BLAST on NCBI

transcript from alignment at scaffold_284:464139..469339-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00056929 ID=TCONS_00056929|Name=TCONS_00056929|organism=Clytia hemisphaerica|type=transcript|length=5201bp|location=Sequence derived from alignment at scaffold_284:464139..469339- (Clytia hemisphaerica)
CATATTTACTTAACTTGGAAAATACTAAACAGGTACACGTTTTTTTATAA GAACAAACTATATAAGAACATAAGGCTTCGGTGACTGAAATGTTAAGAAC AAGTTGAGAACATTTTAAGACTTTGCCGACTCTAACAACAGCCAGTTTCT TAGAAAATGGGTAAAAATGCTCTAAAATAGTGAAAATAAGAATATGTTAA GAACATTTTCAGGCTTCTAACTCAAAAAGTTAAGAACATCCTAAGGCTTC AAAAATTTTGGATGCTCTTATAAAAAAAGAAAGTGTACTGTAGGTCACAC TGTAGAGTTTATGGTCAAAAATTAAAAATATGTCATTTTCTCTTTACTAT CCTAATTTCGAAATCCTAATTGGTTTGTTCGGTGTGTGTTGATTACTATT TCTATGAATTAGACCTTAATTAGTGTTAATTACGAAAAAAGCTGTTAATA GTAACTGTTAATAGCTATGAAACTAGGGGTACTAGGGTTACAAGTTGGCG GGGGGAGTTACCGCCCGACTTTCGATCCGCGGATCCTTACCGGGCCTAAA CAGGAGAAAACAAAGGAAAATTTTGTTGATTTTACGACCTTTATTGGGAC AAATTTGACCAATTTTTTATCTTTCCGGGGATAAAAAGTTAAAATTTTCC TATTTCTCCGACCCTTAGTGGGACTGCAACTTGATTTTCTGATTTTTCCG ACCCTTAGCGAGACTTTGGAAATCCAAAAAAGCTACCCTTTAGGGCGGCA CATACCATACCCTCCATTTGCCTAAGTACCCCCCCCCTTGGATTGAAGCA AGGGCAAACATTGGAAGCTGATAAAATTATGACTTGTACCGGGTGTCCTA GAAAAAAATCCCCTCTTTCTCTTTTCTCCAGTTCTGCCTCTTAAAGAATC AGTATTTTTTGCATTGGCAAGAGGAAGGATAAACTTAAACTTTGAAGGGT CATTTGTTAAATTTGGTCAACTAGATCAAAAGTTATGGCCTAGATGCTAA AACTTTACTTTTCAAAAAAGTTTAAAAAAGGCGAAAAACGAGGGTATTGA ATTTATTGTATGACAAAGACATCAATGTTTTTTTATTCGGGGGCTATGCC AGTACACCTTAGTTTACAAACTCACTCACCCAAGGATCTCTCTTTTATAG AAAGATAAAATCAAGATCTCAATTGTGGTGCAATCAGATGATTTATCAAT ACGAACAAATCTATTGGAAAGCACATTTACCAGTTTAACAAAATTCACAC TGACTGCACCAAATATCACATTATACAAATCGCAAATTGATAAAACACAA GATGGGGTCAATCTAGATTTGGTTTCAACAGGAACGTTAAGAATATCATC ACACCCATTGGCCGTCAGAAATGTTTCATTGACTGTGTTACCACTTTCTG AAGAAGAAAAAGGTGAATAGATTTTTAATGCACCCCTCCCCATAGCTGTC AACTTCGCCTCGCAAAAATGCGGTCGGAAAAATTCTCCCCGGTAATCCAA TTTTTCCCAATGGAAAGATCAGGAAATCGAGGGAATTTCTCTGCGAAGTC CGATTTTATCGGAATTTTTTTTCGAGAAATCAGGGAAATCGGGGAATTTT TCGTCCCATTTCCAAATTCAGGAAATTTTGCCATGTCGCTTTTACCATGA ACATATAAACGACTGGACACCTATCTTTTATTGTCTCTTTGAAGCGAGCT TCGTTGCCGCCTGTTTTTCAAAATTGGTATAAAAAATCCGACAATATTCC GTCATAATTTTATTTCTTTGAATTATTTAGGTAAAAAGATTGATAGAGCT TGAATATTACCCCTAATGAACAAAAAAATTATTTTCGAATTTTTTTGCAA GTTTGTAATTTATTTTATCAACTTTTTCAACTCTGAAATGCAGAATTTCA ACTGCGTGTATACTTTTGAATCCCTTTTGTCACTCCATTAATTTTTTTTA TGACTTGAAAAAAATAGCTTGCCAAAGTTGAGAACCTGTGTAATAAGAAT ATCGAAATTAGAATGTGACACTCTCTAAAATTATTAGACACTTTTAAGTC AAAATTTTGAAATATAAGTCGGAGTTTTGACAAGCTGACGATGATTTTGC CTCTGTTATCTTTGTTATGATATAGATAAAAGACTTGAGAGGAGTAGAAC AACAGAGAGACTTTAGACGAAGTTTTGATGTTGTTAACAAGGTATTCCCA AGTGGTATATATCATCAAAATCTATTGTTTCATTTTATGCTTTTAACGAG GCGGCAACGAAGCTAGCCGTGTTATCTTAAAAAAGACAAAGGAAATGGAT GTCCAGTCGTTTATCTGTTCATGCTTTTACAAAATCTGAAATTTTTTTCA GGAGATCGGAAAATTTTTGGAAATATGCGGGAGATGCGGGAGAAAACGTT GGCATGCGGAAGTCTCCTGCCCAATGCAGGAGAGTTGACAGCTATGCCTT CCCTGTGTCACAGATCCACTGGGACCCCAGCCCCACTGGAAAATCTGGCA AAAATTTCGTCCACGGTAGTAAATACCCTGGAATTTTAGCCCCACTGGGA AATTGACTTATATTTCATCCCCATTCGAAATTGAATGTTTAAAAATTGCG CTCCAAAACCATCCCCACTGGATTTTTTAGCCTTTGAAGAATAGAATTTC TCTCCCCATTGGGATTTCAATATGAATTTTTATCCTCACTGAGGAAATAA GTTCCATCGGGACTGTGAGACAGGGGTGTTCTAATACGGAAAATTTAACT GTTTAAATAACTCTGTTTCAAGAGCACAATAATAAGTTCTAATTAAAGTG TTATCAGAGGTGCTGACGGGATGCTTACTCAAACCATCTATAGTTGCGAG AATGGGCTCCCAGAGCCTCCTGTAACTCAACCATAATAGATATATCTTTG GTCGTTTTCAGTACCACTGACGGAAGTTGGGAACATTAACCCATTGAGAT TGCCATTAATCGTTGCAGTGTCCAAGATTCAATTGGAAATTTGAAGTTTG TTGAATTTAACATCTTTTTCAATAATTTCAAGTTACTTCTGTTTTTTGTT TCTTTAGAATCAACTTCAACTTGTTCCAATGACATTTTCATCGACGCTGG TGCTTTAGTGAAATGCATTTTCATTGAAACCAACATCTTCAACACTGCTG GTCATGTCTTTATCAATGGCACCTTAACAGCTGGTTACTTTGGCGAAGAT TTGAACGTCAAAATCAAATCAAGTGATCTTCACATTGGCATCGATGCAAT TGTTGGTCACAACTCAGTTGAAAATCAATCTAAAAGATCAATCAATGACC ATAAACATTGGTTAAAAACAAAAGTTTTAAATCTTCATATTCATGATGGT GGCTTAACAAATTTCGGATCACTAATAGCTACAGATTGTATCAAATTAAA TGCAAATGGATTGTCGCTTTGCTCAGACTCTAAACGTGATACTGCACATC GCGGATTAGATGGTTTTATTGGTATCAAGAAAGATCAAGGGTTCATTGAT AATGCGATTAAGCCGAAGAAAAAGAGAACCTCGTCGTTCAATGATGATCG AATGATTCAAGCTGTTCATAACTCTAATTGCCAGAATTTTCTTTCCATTG TCAAAGAAGGTGTAGATCCTAACATCTTGGTCGACGGGAGACGAGTGTCT GACGAGGTTGAAATTCAACGAAAAAATGTTGGATTATCAGATCAAGAAAA TTTGGAAATCATACGTACTGGACTACATTTAAATGATTGGAAACATGGTA TGATCAAAGCACCAATTATCGAATGCACAGTTACTGGTGATATTGAGGAC TGTTCACAGATCCAAGGTAGTGATATACGTTTCAATGTTGGTGGTTGTGT CATCATTACTATACCTTGGACATGGATTTCCAAAGATATCAGTGGACAAA TCAGGGGAAATTTAATTTTCAATGATAATGCTATTATTGGTTGTTTCAAA GACCTTCAGGTGGGTTACTTGTGTTACTAAATATTACTTATAATTATTTT TAGTTTTTTAGTTTTTTTGGTGAACATAAGCGAGTCAAATACTTTTAGGT TCTCAAATAAACTTTGCCTTCGGCTCTGGAAATTTTACATCACAATGAAT TCTCTATATAACTCGACTATACTTTATCTTTTGTCTTAAAACATTCGAGC TGTGATGAATCCATTATTTGCTTTTCATCCCTTAAGTGCCTGACCCCTTA TATAAGTCAAAATTCTTGGTCATGTTGAAAACAAAATAAGAATTATACAT GCCATGATTAATGGCGGTAGGAAATGATAATTATTTTGAGTTCTTATAGA CAATAACAGAGTTTTTAGTCTGAATGGCAGACCTCTATAGATATAAACAG AACAGAAGAACAGAAGACACATAGTTTTCCTCAATTTTATGGAAAATTGA TCTATTTATATTTTTAGGTTCTTGGTAATGTTGTGATCTCCAACACATCC ACTTTGTACATCCAAAGAGGGGGCCGTTTATACTGCGCAAAAGCATTAGT GAACAGCAATGAAATCATATGCGAAGGAGATCTTCAATTAGATGTTGCTC ACATAAAGCAAACCGATGAAGGATTGATTATCAACAAAGGTGATTTGCTG GTAAATGTACATGATGTACGTGAACAACAAGAGCAAACCGATGAAGGATT GATTATCAACAAAGGTGATTTGCTGAAAGGTGATTGGTTCGGCAATATCC TGGTACACAATCATTTTTTCCTCCAACTTCAGAAGAAAGTTGTTATTGAT GCTCACGTTATATGCAAAGAATGTACTGTTCAATTCTTTGGGCCAGAATC TCAGTTGGAGATCAACGGAACATGGATTGTAGACGTTGGTGTTTTGAATC TTGAAGCCGATGAACATGCTAGTGATGGTGAAATTCCAAATCTAGTTCTG GTTGGTCAGCTCTTTGCCAAGGGTATTGAAGGAATGACAGCTTCCATTGA AACAGAACCTGGTGCACTTTGCCTTCTGACAGAAAGTATAGATCCAGCTG TCAATGGAATCAATCTCGATGTCAAATGGATGAAGATAAAATCTGATTCT GTGATAAGCTGTACTGGAGCTCCAGAGAATTCCAAGATGTCAAACACTGT GAATGTCAATTGCCAAGAGGAGTTGACCATCTTTGGTGAACTTCGAATCG CTGGTATAAATCACTCAAACATTCATACACAATCATTGAAGAACTCTGGC C

Coding sequence (CDS) from alignment at scaffold_284:464139..469339-

>TCONS_00056929 ID=TCONS_00056929|Name=TCONS_00056929|organism=Clytia hemisphaerica|type=CDS|length=7908bp|location=Sequence derived from alignment at scaffold_284:464139..469339- (Clytia hemisphaerica)
GTTCTTGGTAATGTTGTGATCTCCAACACATCCACTTTGTACATCCAAAG
AGGGGGCCGTTTATACTGCGCAAAAGCATTAGTGAACAGCAATGAAATCA
TATGCGAAGGAGATCTTCAATTAGATGTTGCTCACATAAAGCAAACCGAT
GAAGGATTGATTATCAACAAAGGTGATTTGCTGGTAAATGTACATGATGT
ACGTGAACAACAAGAGCAAACCGATGAAGGATTGATTATCAACAAAGGTG
ATTTGCTGAAAGGTGATTGGTTCGGCAATATCCTGGTACACAATCATTTT
TTCCTCCAACTTCAGAAGAAAGTTGTTATTGATGCTCACGTTATATGCAA
AGAATGTACTGTTCAATTCTTTGGGCCAGAATCTCAGTTGGAGATCAACG
GAACATGGATTGTAGACGTTGGTGTTTTGAATCTTGAAGCCGATGAACAT
GCTAGTGATGGTGAAATTCCAAATCTAGTTCTGGTTGGTCAGCTCTTTGC
CAAGGGTATTGAAGGAATGACAGCTTCCATTGAAACAGAACCTGGTGCAC
TTTGCCTTCTGACAGAAAGTATAGATCCAGCTGTCAATGGAATCAATCTC
GATGTCAAATGGATGAAGATAAAATCTGATTCTGTGATAAGCTGTACTGG
AGCTCCAGAGAATTCCAAGATGTCAAACACTGTGAATGTCAATTGCCAAG
AGGAGTTGACCATCTTTGGTGAACTTCGAATCGCTGGTATAAATCACTCA
AACATTCATACACAATCATTGAAGAACTCTGGCAATCAACTTCAACTTGT
TCCAATGACATTTTCATCGACGCTGGTGCTTTAGTGAAATGCATTTTCAT
TGAAACCAACATCTTCAACACTGCTGGTCATGTCTTTATCAATGGCACCT
TAACAGCTGGTTACTTTGGCGAAGATTTGAACGTCAAAATCAAATCAAGT
GATCTTCACATTGGCATCGATGCAATTGTTGGTCACAACTCAGTTGAAAA
TCAATCTAAAAGATCAATCAATGACCATAAACATTGGTTAAAAACAAAAG
TTTTAAATCTTCATATTCATGATGGTGGCTTAACAAATTTCGGATCACTA
ATAGCTACAGATTGTATCAAATTAAATGCAAATGGATTGTCGCTTTGCTC
AGACTCTAAACGTGATACTGCACATCGCGGATTAGATGGTTTTATTGGTA
TCAAGAAAGATCAAGGGTTCATTGATAATGCGATTAAGCCGAAGAAAAAG
AGAACCTCGTCGTTCAATGATGATCGAATGATTCAAGCTGTTCATAACTC
TAATTGCCAGAATTTTCTTTCCATTGTCAAAGAAGGTGTAGATCCTAACA
TCTTGGTCGACGGGAGACGAGTGTCTGACGAGGTTGAAATTCAACGAAAA
AATGTTGGATTATCAGATCAAGAAAATTTGGAAATCATACGTACTGGACT
ACATTTAAATGATTGGAAACATGGTATGATCAAAGCACCAATTATCGAAT
GCACAGTTACTGGTGATATTGAGGACTGTTCACAGATCCAAGGTAGTGAT
ATACGTTTCAATGTTGGTGGTTGTGTCATCATTACTATACCTTGGACATG
GATTTCCAAAGATATCAGTGGACAAATCAGGGGAAATTTAATTTTCAATG
ATAATGCTATTATTGGTTGTTTCAAAGACCTTCAGAAAGATAAAATCAAG
ATCTCAATTGTGGTGCAATCAGATGATTTATCAATACGAACAAATCTATT
GGAAAGCACATTTACCAGTTTAACAAAATTCACACTGACTGCACCAAATA
TCACATTATACAAATCGCAAATTGATAAAACACAAGATGGGGTCAATCTA
GATTTGGTTTCAACAGGAACGTTAAGAATATCATCACACCCATTGGCCGT
CAGAAATGTTTCATTGACTGTGTTACCACTTTCTGAAGAAGAAAAAGTAT
TTACTTAACTTGGAAAATACTAAACAGGTTCTTGGTAATGTTGTGATCTC
CAACACATCCACTTTGTACATCCAAAGAGGGGGCCGTTTATACTGCGCAA
AAGCATTAGTGAACAGCAATGAAATCATATGCGAAGGAGATCTTCAATTA
GATGTTGCTCACATAAAGCAAACCGATGAAGGATTGATTATCAACAAAGG
TGATTTGCTGGTAAATGTACATGATGTACGTGAACAACAAGAGCAAACCG
ATGAAGGATTGATTATCAACAAAGGTGATTTGCTGAAAGGTGATTGGTTC
GGCAATATCCTGGTACACAATCATTTTTTCCTCCAACTTCAGAAGAAAGT
TGTTATTGATGCTCACGTTATATGCAAAGAATGTACTGTTCAATTCTTTG
GGCCAGAATCTCAGTTGGAGATCAACGGAACATGGATTGTAGACGTTGGT
GTTTTGAATCTTGAAGCCGATGAACATGCTAGTGATGGTGAAATTCCAAA
TCTAGTTCTGGTTGGTCAGCTCTTTGCCAAGGGTATTGAAGGAATGACAG
CTTCCATTGAAACAGAACCTGGTGCACTTTGCCTTCTGACAGAAAGTATA
GATCCAGCTGTCAATGGAATCAATCTCGATGTCAAATGGATGAAGATAAA
ATCTGATTCTGTGATAAGCTGTACTGGAGCTCCAGAGAATTCCAAGATGT
CAAACACTGTGAATGTCAATTGCCAAGAGGAGTTGACCATCTTTGGTGAA
CTTCGAATCGCTGGTATAAATCACTCAAACATTCATACACAATCATTGAA
GAACTCTGGCAATCAACTTCAACTTGTTCCAATGACATTTTCATCGACGC
TGGTGCTTTAGTGAAATGCATTTTCATTGAAACCAACATCTTCAACACTG
CTGGTCATGTCTTTATCAATGGCACCTTAACAGCTGGTTACTTTGGCGAA
GATTTGAACGTCAAAATCAAATCAAGTGATCTTCACATTGGCATCGATGC
AATTGTTGGTCACAACTCAGTTGAAAATCAATCTAAAAGATCAATCAATG
ACCATAAACATTGGTTAAAAACAAAAGTTTTAAATCTTCATATTCATGAT
GGTGGCTTAACAAATTTCGGATCACTAATAGCTACAGATTGTATCAAATT
AAATGCAAATGGATTGTCGCTTTGCTCAGACTCTAAACGTGATACTGCAC
ATCGCGGATTAGATGGTTTTATTGGTATCAAGAAAGATCAAGGGTTCATT
GATAATGCGATTAAGCCGAAGAAAAAGAGAACCTCGTCGTTCAATGATGA
TCGAATGATTCAAGCTGTTCATAACTCTAATTGCCAGAATTTTCTTTCCA
TTGTCAAAGAAGGTGTAGATCCTAACATCTTGGTCGACGGGAGACGAGTG
TCTGACGAGGTTGAAATTCAACGAAAAAATGTTGGATTATCAGATCAAGA
AAATTTGGAAATCATACGTACTGGACTACATTTAAATGATTGGAAACATG
GTATGATCAAAGCACCAATTATCGAATGCACAGTTACTGGTGATATTGAG
GACTGTTCACAGATCCAAGGTAGTGATATACGTTTCAATGTTGGTGGTTG
TGTCATCATTACTATACCTTGGACATGGATTTCCAAAGATATCAGTGGAC
AAATCAGGGGAAATTTAATTTTCAATGATAATGCTATTATTGGTTGTTTC
AAAGACCTTCAGAAAGATAAAATCAAGATCTCAATTGTGGTGCAATCAGA
TGATTTATCAATACGAACAAATCTATTGGAAAGCACATTTACCAGTTTAA
CAAAATTCACACTGACTGCACCAAATATCACATTATACAAATCGCAAATT
GATAAAACACAAGATGGGGTCAATCTAGATTTGGTTTCAACAGGAACGTT
AAGAATATCATCACACCCATTGGCCGTCAGAAATGTTTCATTGACTGTGT
TACCACTTTCTGAAGAAGAAAAAGTATTTACTTAACTTGGAAAATACTAA
ACAGGTTCTTGGTAATGTTGTGATCTCCAACACATCCACTTTGTACATCC
AAAGAGGGGGCCGTTTATACTGCGCAAAAGCATTAGTGAACAGCAATGAA
ATCATATGCGAAGGAGATCTTCAATTAGATGTTGCTCACATAAAGCAAAC
CGATGAAGGATTGATTATCAACAAAGGTGATTTGCTGGTAAATGTACATG
ATGTACGTGAACAACAAGAGCAAACCGATGAAGGATTGATTATCAACAAA
GGTGATTTGCTGAAAGGTGATTGGTTCGGCAATATCCTGGTACACAATCA
TTTTTTCCTCCAACTTCAGAAGAAAGTTGTTATTGATGCTCACGTTATAT
GCAAAGAATGTACTGTTCAATTCTTTGGGCCAGAATCTCAGTTGGAGATC
AACGGAACATGGATTGTAGACGTTGGTGTTTTGAATCTTGAAGCCGATGA
ACATGCTAGTGATGGTGAAATTCCAAATCTAGTTCTGGTTGGTCAGCTCT
TTGCCAAGGGTATTGAAGGAATGACAGCTTCCATTGAAACAGAACCTGGT
GCACTTTGCCTTCTGACAGAAAGTATAGATCCAGCTGTCAATGGAATCAA
TCTCGATGTCAAATGGATGAAGATAAAATCTGATTCTGTGATAAGCTGTA
CTGGAGCTCCAGAGAATTCCAAGATGTCAAACACTGTGAATGTCAATTGC
CAAGAGGAGTTGACCATCTTTGGTGAACTTCGAATCGCTGGTATAAATCA
CTCAAACATTCATACACAATCATTGAAGAACTCTGGCAATCAACTTCAAC
TTGTTCCAATGACATTTTCATCGACGCTGGTGCTTTAGTGAAATGCATTT
TCATTGAAACCAACATCTTCAACACTGCTGGTCATGTCTTTATCAATGGC
ACCTTAACAGCTGGTTACTTTGGCGAAGATTTGAACGTCAAAATCAAATC
AAGTGATCTTCACATTGGCATCGATGCAATTGTTGGTCACAACTCAGTTG
AAAATCAATCTAAAAGATCAATCAATGACCATAAACATTGGTTAAAAACA
AAAGTTTTAAATCTTCATATTCATGATGGTGGCTTAACAAATTTCGGATC
ACTAATAGCTACAGATTGTATCAAATTAAATGCAAATGGATTGTCGCTTT
GCTCAGACTCTAAACGTGATACTGCACATCGCGGATTAGATGGTTTTATT
GGTATCAAGAAAGATCAAGGGTTCATTGATAATGCGATTAAGCCGAAGAA
AAAGAGAACCTCGTCGTTCAATGATGATCGAATGATTCAAGCTGTTCATA
ACTCTAATTGCCAGAATTTTCTTTCCATTGTCAAAGAAGGTGTAGATCCT
AACATCTTGGTCGACGGGAGACGAGTGTCTGACGAGGTTGAAATTCAACG
AAAAAATGTTGGATTATCAGATCAAGAAAATTTGGAAATCATACGTACTG
GACTACATTTAAATGATTGGAAACATGGTATGATCAAAGCACCAATTATC
GAATGCACAGTTACTGGTGATATTGAGGACTGTTCACAGATCCAAGGTAG
TGATATACGTTTCAATGTTGGTGGTTGTGTCATCATTACTATACCTTGGA
CATGGATTTCCAAAGATATCAGTGGACAAATCAGGGGAAATTTAATTTTC
AATGATAATGCTATTATTGGTTGTTTCAAAGACCTTCAGAAAGATAAAAT
CAAGATCTCAATTGTGGTGCAATCAGATGATTTATCAATACGAACAAATC
TATTGGAAAGCACATTTACCAGTTTAACAAAATTCACACTGACTGCACCA
AATATCACATTATACAAATCGCAAATTGATAAAACACAAGATGGGGTCAA
TCTAGATTTGGTTTCAACAGGAACGTTAAGAATATCATCACACCCATTGG
CCGTCAGAAATGTTTCATTGACTGTGTTACCACTTTCTGAAGAAGAAAAA
GTATTTACTTAACTTGGAAAATACTAAACAGGTTCTTGGTAATGTTGTGA
TCTCCAACACATCCACTTTGTACATCCAAAGAGGGGGCCGTTTATACTGC
GCAAAAGCATTAGTGAACAGCAATGAAATCATATGCGAAGGAGATCTTCA
ATTAGATGTTGCTCACATAAAGCAAACCGATGAAGGATTGATTATCAACA
AAGGTGATTTGCTGGTAAATGTACATGATGTACGTGAACAACAAGAGCAA
ACCGATGAAGGATTGATTATCAACAAAGGTGATTTGCTGAAAGGTGATTG
GTTCGGCAATATCCTGGTACACAATCATTTTTTCCTCCAACTTCAGAAGA
AAGTTGTTATTGATGCTCACGTTATATGCAAAGAATGTACTGTTCAATTC
TTTGGGCCAGAATCTCAGTTGGAGATCAACGGAACATGGATTGTAGACGT
TGGTGTTTTGAATCTTGAAGCCGATGAACATGCTAGTGATGGTGAAATTC
CAAATCTAGTTCTGGTTGGTCAGCTCTTTGCCAAGGGTATTGAAGGAATG
ACAGCTTCCATTGAAACAGAACCTGGTGCACTTTGCCTTCTGACAGAAAG
TATAGATCCAGCTGTCAATGGAATCAATCTCGATGTCAAATGGATGAAGA
TAAAATCTGATTCTGTGATAAGCTGTACTGGAGCTCCAGAGAATTCCAAG
ATGTCAAACACTGTGAATGTCAATTGCCAAGAGGAGTTGACCATCTTTGG
TGAACTTCGAATCGCTGGTATAAATCACTCAAACATTCATACACAATCAT
TGAAGAACTCTGGCAATCAACTTCAACTTGTTCCAATGACATTTTCATCG
ACGCTGGTGCTTTAGTGAAATGCATTTTCATTGAAACCAACATCTTCAAC
ACTGCTGGTCATGTCTTTATCAATGGCACCTTAACAGCTGGTTACTTTGG
CGAAGATTTGAACGTCAAAATCAAATCAAGTGATCTTCACATTGGCATCG
ATGCAATTGTTGGTCACAACTCAGTTGAAAATCAATCTAAAAGATCAATC
AATGACCATAAACATTGGTTAAAAACAAAAGTTTTAAATCTTCATATTCA
TGATGGTGGCTTAACAAATTTCGGATCACTAATAGCTACAGATTGTATCA
AATTAAATGCAAATGGATTGTCGCTTTGCTCAGACTCTAAACGTGATACT
GCACATCGCGGATTAGATGGTTTTATTGGTATCAAGAAAGATCAAGGGTT
CATTGATAATGCGATTAAGCCGAAGAAAAAGAGAACCTCGTCGTTCAATG
ATGATCGAATGATTCAAGCTGTTCATAACTCTAATTGCCAGAATTTTCTT
TCCATTGTCAAAGAAGGTGTAGATCCTAACATCTTGGTCGACGGGAGACG
AGTGTCTGACGAGGTTGAAATTCAACGAAAAAATGTTGGATTATCAGATC
AAGAAAATTTGGAAATCATACGTACTGGACTACATTTAAATGATTGGAAA
CATGGTATGATCAAAGCACCAATTATCGAATGCACAGTTACTGGTGATAT
TGAGGACTGTTCACAGATCCAAGGTAGTGATATACGTTTCAATGTTGGTG
GTTGTGTCATCATTACTATACCTTGGACATGGATTTCCAAAGATATCAGT
GGACAAATCAGGGGAAATTTAATTTTCAATGATAATGCTATTATTGGTTG
TTTCAAAGACCTTCAGAAAGATAAAATCAAGATCTCAATTGTGGTGCAAT
CAGATGATTTATCAATACGAACAAATCTATTGGAAAGCACATTTACCAGT
TTAACAAAATTCACACTGACTGCACCAAATATCACATTATACAAATCGCA
AATTGATAAAACACAAGATGGGGTCAATCTAGATTTGGTTTCAACAGGAA
CGTTAAGAATATCATCACACCCATTGGCCGTCAGAAATGTTTCATTGACT
GTGTTACCACTTTCTGAAGAAGAAAAAGTATTTACTTAACTTGGAAAATA
CTAAACAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035863XLOC_035863Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056929-exon-scaffold_284-1575043694:469308..469339TCONS_00056929-exon-scaffold_284-1575043694:469308..469339Clytia hemisphaericaexon
TCONS_00056929-exon-scaffold_284-1575043694:467928..468189TCONS_00056929-exon-scaffold_284-1575043694:467928..468189Clytia hemisphaericaexon
TCONS_00056929-exon-scaffold_284-1575043694:465381..466282TCONS_00056929-exon-scaffold_284-1575043694:465381..466282Clytia hemisphaericaexon
TCONS_00056929-exon-scaffold_284-1575043694:464139..464922TCONS_00056929-exon-scaffold_284-1575043694:464139..464922Clytia hemisphaericaexon
TCONS_00056929-exon-scaffold_284-1510915933:469308..469339TCONS_00056929-exon-scaffold_284-1510915933:469308..469339Clytia hemisphaericaexon
TCONS_00056929-exon-scaffold_284-1510915933:467928..468189TCONS_00056929-exon-scaffold_284-1510915933:467928..468189Clytia hemisphaericaexon
TCONS_00056929-exon-scaffold_284-1510915933:465381..466282TCONS_00056929-exon-scaffold_284-1510915933:465381..466282Clytia hemisphaericaexon
TCONS_00056929-exon-scaffold_284-1510915933:464139..464922TCONS_00056929-exon-scaffold_284-1510915933:464139..464922Clytia hemisphaericaexon
TCONS_00056929-exon-scaffold_284-1491911889:469308..469339TCONS_00056929-exon-scaffold_284-1491911889:469308..469339Clytia hemisphaericaexon
TCONS_00056929-exon-scaffold_284-1491911889:467928..468189TCONS_00056929-exon-scaffold_284-1491911889:467928..468189Clytia hemisphaericaexon
TCONS_00056929-exon-scaffold_284-1491911889:465381..466282TCONS_00056929-exon-scaffold_284-1491911889:465381..466282Clytia hemisphaericaexon
TCONS_00056929-exon-scaffold_284-1491911889:464139..464922TCONS_00056929-exon-scaffold_284-1491911889:464139..464922Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056929-proteinTCONS_00056929-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_284supercontigscaffold_284:464139..469339 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 2.13487e-08 2.63282e-09 2.44403e-08 2.61016e-09 0 0.564569 2.4036e-08 9.37606e-09 1.29103e-08 7.67941e-10 0.875865 0.939958 1.72172e-08 0.570313 1.36289 2.31143e-08 0.213055 6.72204e-09 1.47251e-08 2.68166e-09 1.77943e-07 4.06044 1.23609 0.908775 4.9276e-09 4.2278e-08
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR012334Pectin_lyas_fold
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00056929 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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