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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056960 ID=TCONS_00056960|Name=TCONS_00056960|organism=Clytia hemisphaerica|type=transcript|length=1123bp
CTTGCATTgtccatttttgttttgtgtaGATATAGCAACAATACATTTGA
TCAGAGTGAAAGCAGACTTTTTGTTATCAGTCAAACCAAATTGAagcaat
attttatttttatttttagtgatGAAGACAGGTTAATTATAACTAatgtt
tttaattctttttagtGAAGAATTAATGAAATAAGAGTTAATGAATAGTT
ATAATGGCACCTTTTTCTTGGAAGTGTGAGAAATGTGGTAAAATCATGAA
CCATGTTAAAAGTGTTGCAAGGCACAAAAAGAAACATTCGGAAGAAAATA
CTCAAAAGTTTAATTGTGACAAGTGATCTAAAAGTTTTGACAGAAAAGAA
AACCTAGCCAGGCATCATAAAACATGCAAGACAAACAAATCTGATAGACA
GTGTACAATCTGTCTCAAACGTTTCAAAGAACCATGgcaaatgaaaagac
atttaaaaactcatgtaaacaaaaaaacagtTAAATGTAACAATTGTGGT
TCTTGGATTAAGGATGATTTTGAATCGCACAGTGTGTTGTGTTTGAGGGA
GAAAGCAATTACAAGTGAAGAATTGGATAATGAGTACCCTTCCATGGTTC
CAATTACAAGGTACAGCTTTTATTGAGACACTTCTGTCTCAGTGACTTTG
TGAGAATTTTTAAGTGAGTGGGGATATGCGTGGACCTACTGGGGTATCTA
AAGTAGTATTACTGTAGTACCAGTTTTTATTTGGATAAAGgattattttg
tgttttgttcTTAGCCAGCTCTAGCATACAAGATTTAAGgcaatatttga
ttttttttcagtcgaCCAGTTGTTGAAGAAATTGAACTTGAAGAAAACTT
TGTTAGTGATTTGGGAATGAGTGTGCTAATGGATTTTCAAAGGTAAGCGT
TTGTCAATTACATTAAAGCAAATTGAAGCAGTTCAGAATCAACTTAGAAA
TTATTTATACTATTATGAAATACTTCTTATAAATTCTTATtcatttttat
attgattttagCTTAGACGAACAGCAGCATTTGGAAGAGTCTCAGCCTAG
CAGAGAAACATCAACAAATATGGAGACTCCAGAAAGATTGAACAGTACTG
CTATACGGTTTAGAAAAGTAAGN Run BLAST on NCBI transcript from alignment at scaffold_284:923373..924495- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056960 ID=TCONS_00056960|Name=TCONS_00056960|organism=Clytia hemisphaerica|type=transcript|length=1123bp|location=Sequence derived from alignment at scaffold_284:923373..924495- (Clytia hemisphaerica)
CTTGCATTGTCCATTTTTGTTTTGTGTAGATATAGCAACAATACATTTGA
TCAGAGTGAAAGCAGACTTTTTGTTATCAGTCAAACCAAATTGAAGCAAT
ATTTTATTTTTATTTTTAGTGATGAAGACAGGTTAATTATAACTAATGTT
TTTAATTCTTTTTAGTGAAGAATTAATGAAATAAGAGTTAATGAATAGTT
ATAATGGCACCTTTTTCTTGGAAGTGTGAGAAATGTGGTAAAATCATGAA
CCATGTTAAAAGTGTTGCAAGGCACAAAAAGAAACATTCGGAAGAAAATA
CTCAAAAGTTTAATTGTGACAAGTGATCTAAAAGTTTTGACAGAAAAGAA
AACCTAGCCAGGCATCATAAAACATGCAAGACAAACAAATCTGATAGACA
GTGTACAATCTGTCTCAAACGTTTCAAAGAACCATGGCAAATGAAAAGAC
ATTTAAAAACTCATGTAAACAAAAAAACAGTTAAATGTAACAATTGTGGT
TCTTGGATTAAGGATGATTTTGAATCGCACAGTGTGTTGTGTTTGAGGGA
GAAAGCAATTACAAGTGAAGAATTGGATAATGAGTACCCTTCCATGGTTC
CAATTACAAGGTACAGCTTTTATTGAGACACTTCTGTCTCAGTGACTTTG
TGAGAATTTTTAAGTGAGTGGGGATATGCGTGGACCTACTGGGGTATCTA
AAGTAGTATTACTGTAGTACCAGTTTTTATTTGGATAAAGGATTATTTTG
TGTTTTGTTCTTAGCCAGCTCTAGCATACAAGATTTAAGGCAATATTTGA
TTTTTTTTCAGTCGACCAGTTGTTGAAGAAATTGAACTTGAAGAAAACTT
TGTTAGTGATTTGGGAATGAGTGTGCTAATGGATTTTCAAAGGTAAGCGT
TTGTCAATTACATTAAAGCAAATTGAAGCAGTTCAGAATCAACTTAGAAA
TTATTTATACTATTATGAAATACTTCTTATAAATTCTTATTCATTTTTAT
ATTGATTTTAGCTTAGACGAACAGCAGCATTTGGAAGAGTCTCAGCCTAG
CAGAGAAACATCAACAAATATGGAGACTCCAGAAAGATTGAACAGTACTG
CTATACGGTTTAGAAAAGTAAGN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00056960-exon-scaffold_284-1575043694:923373..924495 | TCONS_00056960-exon-scaffold_284-1575043694:923373..924495 | Clytia hemisphaerica | exon |
| TCONS_00056960-exon-scaffold_284-1510915933:923373..924495 | TCONS_00056960-exon-scaffold_284-1510915933:923373..924495 | Clytia hemisphaerica | exon |
| TCONS_00056960-exon-scaffold_284-1491911889:923373..924495 | TCONS_00056960-exon-scaffold_284-1491911889:923373..924495 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_284 | supercontig | scaffold_284:923373..924495 - |
Blast
The following BLAST results are available for this feature:
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