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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056964 ID=TCONS_00056964|Name=TCONS_00056964|organism=Clytia hemisphaerica|type=transcript|length=1316bp
ACTTTAGAATGATGTAGTAAAAATACAACTAAAATGGATGGAAATCTGTA
GTAAATGATCCAAAAAACATATTTATGGAAACTCTGGTTGTGTATGTATc
agagaaatattttttgtttgaaaatattttggttttaattttgaaagagc
TTTTAAAGGAAATAATTGAGATAATTCAATGCAAAAATGGTTTTAGGCAG
TGattttgagaaaatggagCCTAGCAAACAGGCTGATTTGTTGCTATTGA
CAACCATTGGTATCTTTATTATCCTGACCTTCTTCGCTTTCCTACTGCAC
GAGGGTAAAGATATGTTAGTTAAGCCGGTTTGGAAGAAAATTAAAGAGAT
TTTACCATGCTGTGAATGTTGGAGTGGCATTTCATGTCGCTGTTTGAGTA
GGAAGAAAAGTGACTCTTCAACCAGAAGTGTGAAAAGAAACGGTGCAGCT
TTTATTTGAATTCTTTAATTTGGGTTTGAAATGAGCTGAGAAGTTGATCA
AAGCATGGATGGCGAGAATCTGGAAAACAcgatcaaaaatttccaacagT
TCCAGAGAAAGCAGGCTTATCGGTGCAGGGTTTTCTAGAATAGCATTTAT
TTGGATGCTTGCTAGGATCGATTtgcttcaagatttttttaaacccgGGA
ATCCCATCAAACATCAATATATGTTTTTACAAGGTGTGGCAAAAACACTT
GAATTAACATGACATTTCATATCAATAATACATGATCATTTTTTGTCTGG
GAATCCGCAGCTCGATATCCAGAAGTTGGCACTAACCTCTAGGTGCAAGT
TAAATAGTATTTGAATCGGCGTGATCTAGATTTTTGTCTTTCAAAAGGCT
AGAAAAAGTCGTGAAAAAGAAAAGGGTTCCATGATTTCGAATTTTTTGAC
TTCCTTCCTCAAATTTTTAACCAAAGAtttccgattttcaaaaatcaggc
gTCATCCGGGAAACCAAGTGCCCCAGTTCTACATCGAGTGTTCTAGAGAT
TCCCAGAACCCCAGAATGCTGGAAATTTCTCCAACCCAAGGGTCAAAATT
CtatgaattagaaaaaattataaatccGTTAACCGTACCCGTTTATACTA
TACTTGAATAGAAATTTGTTGAtagcttttttataaaatgtaaatagGAA
ATTATAGTTTGTTAGACTTTTATACTAAAAAAACTTAAATCGATCTTTAA
CTATTTTTGATACGCAAAATAAGATAACATTACGACTGTAAAAAAGTGTG
TGGATATCATCTTTCAGCCTTCACATTCGCAGATTTCTTtgccatttttg
caaaaattagtCTTCG Run BLAST on NCBI transcript from alignment at scaffold_284:1067864..1069870- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056964 ID=TCONS_00056964|Name=TCONS_00056964|organism=Clytia hemisphaerica|type=transcript|length=2007bp|location=Sequence derived from alignment at scaffold_284:1067864..1069870- (Clytia hemisphaerica)
ACTTTAGAATGATGTAGTAAAAATACAACTAAAATGGATGGAAATCTGTA
GTAAATGATCCAAAAAACATATTTATGGAAACTCTGGTTGTGTATGTATC
AGAGAAATATTTTTTGTTTGAAAATATTTTGGTTTTAATTTTGAAAGAGC
TTTTAAAGGAAATAATTGAGATAATTCAATGCAAAAATGGTTTTAGGCAG
TGGTAAGTTAATGCCGATCATTAATGTCAAACTTGATTACTTTATTGGTC
CTCTTTACGCCGGCCCTAATAGGAGTTATTTTTTCGTCGCTGGTGTAATA
AGAAGGGATTGTAACTGAATCAGGACCGGGCGGAATATTTGAGCTTTGGC
GTAAAAGAGCCGGTGTAAAAGGGGTAATTACCGATAAGGTAACAAAAATA
TCATTATTTTCTAAACAAGATAAGATAAGATGTGTATACCTCCGTATCAC
AGTTCTTGTGGGTTCTCCTTCCCTCTTGAAAATGTGGCCAAAAATCATCT
AATTTCATCCTTATTGATACACTGACTAAACGAATGCAAACTTCATCATT
TTTTTTATATTGCCCTCCAGATTTAGCTGTAATTATATCAAATCATCAAA
ATTAAGTGATTTTCATCAATTTCCATTACCATGTCTCATTTGGCTGAAAA
ATTATCAACGGATTACTTAAACTAAGAATTTATTAAACCCATCACCAAAG
AAAATGTTAATGAAGCGTCTGTTTAAAGAAATTTTAGGCTGTAGACTCAC
TTTCTCAATCTACTCAATCTCCTGTTCTCATCCGAACAGCAAGATTTCCG
CCAGAAAAACCACCCACCCGCCCACACTGATATCTTAAACTAAAAGATCC
AATATAATTATAATAACTTTTATTTCTTTCTTATCATCTTCAGATTTTGA
GAAAATGGAGCCTAGCAAACAGGCTGATTTGTTGCTATTGACAACCATTG
GTATCTTTATTATCCTGACCTTCTTCGCTTTCCTACTGCACGAGGGTAAA
GATATGTTAGTTAAGCCGGTTTGGAAGAAAATTAAAGAGATTTTACCATG
CTGTGAATGTTGGAGTGGCATTTCATGTCGCTGTTTGAGTAGGAAGAAAA
GTGACTCTTCAACCAGAAGTGTGAAAAGAAACGGTGCAGCTTTTATTTGA
ATTCTTTAATTTGGGTTTGAAATGAGCTGAGAAGTTGATCAAAGCATGGA
TGGCGAGAATCTGGAAAACACGATCAAAAATTTCCAACAGTTCCAGAGAA
AGCAGGCTTATCGGTGCAGGGTTTTCTAGAATAGCATTTATTTGGATGCT
TGCTAGGATCGATTTGCTTCAAGATTTTTTTAAACCCGGGAATCCCATCA
AACATCAATATATGTTTTTACAAGGTGTGGCAAAAACACTTGAATTAACA
TGACATTTCATATCAATAATACATGATCATTTTTTGTCTGGGAATCCGCA
GCTCGATATCCAGAAGTTGGCACTAACCTCTAGGTGCAAGTTAAATAGTA
TTTGAATCGGCGTGATCTAGATTTTTGTCTTTCAAAAGGCTAGAAAAAGT
CGTGAAAAAGAAAAGGGTTCCATGATTTCGAATTTTTTGACTTCCTTCCT
CAAATTTTTAACCAAAGATTTCCGATTTTCAAAAATCAGGCGTCATCCGG
GAAACCAAGTGCCCCAGTTCTACATCGAGTGTTCTAGAGATTCCCAGAAC
CCCAGAATGCTGGAAATTTCTCCAACCCAAGGGTCAAAATTCTATGAATT
AGAAAAAATTATAAATCCGTTAACCGTACCCGTTTATACTATACTTGAAT
AGAAATTTGTTGATAGCTTTTTTATAAAATGTAAATAGGAAATTATAGTT
TGTTAGACTTTTATACTAAAAAAACTTAAATCGATCTTTAACTATTTTTG
ATACGCAAAATAAGATAACATTACGACTGTAAAAAAGTGTGTGGATATCA
TCTTTCAGCCTTCACATTCGCAGATTTCTTTGCCATTTTTGCAAAAATTA
GTCTTCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00056964-exon-scaffold_284-1575043694:1069669..1069870 | TCONS_00056964-exon-scaffold_284-1575043694:1069669..1069870 | Clytia hemisphaerica | exon |
| TCONS_00056964-exon-scaffold_284-1575043694:1067864..1068977 | TCONS_00056964-exon-scaffold_284-1575043694:1067864..1068977 | Clytia hemisphaerica | exon |
| TCONS_00056964-exon-scaffold_284-1510915933:1069669..1069870 | TCONS_00056964-exon-scaffold_284-1510915933:1069669..1069870 | Clytia hemisphaerica | exon |
| TCONS_00056964-exon-scaffold_284-1510915933:1067864..1068977 | TCONS_00056964-exon-scaffold_284-1510915933:1067864..1068977 | Clytia hemisphaerica | exon |
| TCONS_00056964-exon-scaffold_284-1491911889:1069669..1069870 | TCONS_00056964-exon-scaffold_284-1491911889:1069669..1069870 | Clytia hemisphaerica | exon |
| TCONS_00056964-exon-scaffold_284-1491911889:1067864..1068977 | TCONS_00056964-exon-scaffold_284-1491911889:1067864..1068977 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_284 | supercontig | scaffold_284:1067864..1069870 - |
Blast
The following BLAST results are available for this feature:
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