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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00057101 ID=TCONS_00057101|Name=TCONS_00057101|organism=Clytia hemisphaerica|type=transcript|length=927bp
TGTTAAATTGAGAAATGCTGACGTCTGCATTACCACTGCAAGACCGTATT
TGTTCAACAACAGTGCAAATGGTATGGAGAAAAGAACTAAACAGATTCCA
AATACAATTGAAAGCATATTGATCGACAAGATGCTGATTTGGTAATATTC
TCTTAAGATGTTGGATACTGCTGGAAAGCAAAGCCAATTTGAGCCACAGA
CCAAGGATAGGAGGCAATATGATGCCAGGACGAACCAACGTTGAGGGTGA
AGCTGGAATATGATATCCTCTTCTGGAGATACTGGTTGTAAtggtggttc
tggtgattcTGTATCATCTTCGGTGATGATTGGCGATGATTGATGAATAT
CGTTGAGATTGTCGAAGGATTCTTTAGTGTTGCTTGATGATGGTGGTTTT
TGGTAAATGAATGGAGGCTCTGGTTGTTGTTGACATTTTGTATTTGAGCA
TGGAGCCATTGTTGTTTTACAAAGTGTTTTGGTATGAGTTTGTGGATTTG
ATTGAAACCTTCTTTTGTTCTGTGCTTTTATTTGAAACACTCTCTTTTTC
TTCCTATCTGAGTTTGACTGGTTATGTGGAAGGATCTCTTGGTTTTCTCT
TGAGAGTCGATTAACTTTCCTTGTGCTAGAAGCTCTTTGTAGACTCCAAT
AGTATTGTTTGGTCATATGGAAGAGCTCTTCTTTGGTTAATGAATTTTCC
TAGTTGTACAAACTTTTTGTACACTCGAATGATGTTATGCGGTTTAAATC
ACAAATAACTAAGTCGtcAAGAGTTGATCAATCTTGATATACGGTTTTTA
CCAAATGTAAAATGATGAGCAAAATaatccaaaatttgaaaataaaaaat
tcaaaatactgTGCAGCAATAAATCCAAAATGCaggattgaaataaatat
acaaTATTGGTCAAACCAATGTTTAAA Run BLAST on NCBI transcript from alignment at scaffold_285:173225..174187- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00057101 ID=TCONS_00057101|Name=TCONS_00057101|organism=Clytia hemisphaerica|type=transcript|length=963bp|location=Sequence derived from alignment at scaffold_285:173225..174187- (Clytia hemisphaerica)
TGTTAAATTGAGAAATGCTGACGTCTGCATTACCACTGCAAGACCGTATT
TGTTCAACAACAGTGCAAATGGTATGGAGAAAAGAACTAAACAGATTCCA
AATACAATTGAAAGCATATTGATCGACAAGATGCTGATTTGGTAATATTC
TCTTAAGATGTTGGATACTGCTGGAAAGCAAAGCCAATTTGAGCCACAGA
CCAAGGATAGGAGGCAATATGATGCCAGGACGAACCAACGTTGAGGGTGA
AGCTGGAATATGATATCCTCTTCTGGAGATACTGGTTGTAATGGTGGTTC
TGGTGATTCTGTATCATCTTCGGTGATGATTGGCGATGATTGATGAATAT
CGTTGAGATTGTCGAAGGATTCTTTAGTGTTGCTTGATGATGGTGGTTTT
TGGTAAATGAATGGAGGCTCTGGTTGTTGTTGACATTTTGTATTTGAGCA
TGGAGCCATTGTTGTTTTACAAAGTGTTTTGGTATGAGTTTGTGGATTTG
ATTGAAACCTTCTTTTGTTCTGTGCTTTTATTTGAAACACTCTCTTTTTC
TTCCTATCTGAGTTTGACTGGTTATGTGGAAGGATCTCTTGGTTTTCTCT
TGAGAGTCGATTAACTTTCCTTGTGCTAGAAGCTCTTTGTAGACTCCAAT
AGTATTGTTTGGTCATATGGAAGAGCTCTTCTTTGGTTAATGAATTTTCC
TAGTTGTACAAACTTTTTGTACACTCGAATGATGTTATGCGGTTTAAATC
ACAAATAACTAAGTCGGTAAATAAATACGATCCAATGTAAAAAATATACA
AGTCAAGAGTTGATCAATCTTGATATACGGTTTTTACCAAATGTAAAATG
ATGAGCAAAATAATCCAAAATTTGAAAATAAAAAATTCAAAATACTGTGC
AGCAATAAATCCAAAATGCAGGATTGAAATAAATATACAATATTGGTCAA
ACCAATGTTTAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00057101-exon-scaffold_285-1575043694:173422..174187 | TCONS_00057101-exon-scaffold_285-1575043694:173422..174187 | Clytia hemisphaerica | exon |
| TCONS_00057101-exon-scaffold_285-1575043694:173225..173385 | TCONS_00057101-exon-scaffold_285-1575043694:173225..173385 | Clytia hemisphaerica | exon |
| TCONS_00057101-exon-scaffold_285-1510915933:173422..174187 | TCONS_00057101-exon-scaffold_285-1510915933:173422..174187 | Clytia hemisphaerica | exon |
| TCONS_00057101-exon-scaffold_285-1510915933:173225..173385 | TCONS_00057101-exon-scaffold_285-1510915933:173225..173385 | Clytia hemisphaerica | exon |
| TCONS_00057101-exon-scaffold_285-1491911889:173422..174187 | TCONS_00057101-exon-scaffold_285-1491911889:173422..174187 | Clytia hemisphaerica | exon |
| TCONS_00057101-exon-scaffold_285-1491911889:173225..173385 | TCONS_00057101-exon-scaffold_285-1491911889:173225..173385 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_285 | supercontig | scaffold_285:173225..174187 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR020846 | MFS_dom |
Blast
The following BLAST results are available for this feature:
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