TCONS_00057214 (transcript) - C. hemisphaerica

Overview
NameTCONS_00057214
Unique NameTCONS_00057214
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1788

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00057214 ID=TCONS_00057214|Name=TCONS_00057214|organism=Clytia hemisphaerica|type=transcript|length=1788bp
CGGATGAtgattatgcatAATCACGGAAGTTTGATGTCAGAATGGGTTAT
TCCTTTCAGTCAAATCGAAATCGGTGATCACATCGGTGTTGGAAGGGTTG
GCAAAGTTTACAAAGCAAAATGGCATGGGGAATGTGCCCTCAAAGTTTTA
TACTTGGAAAACCCAACTACGGAAGAGAAAAATGACTTCAAATATAAGGT
ACAAGTATTACGGCGTACGAGACACGAAAACTTAGTTTTGTTCATGGGAG
CTTGTATGGAACCTGCAACCCTTGCTATCGTTTGCTCGTTTATCAAAGGG
ATGTCCCTTTATTCACACATTCACGTTCACGAAAccaaatttgatgacgt
caaaaTCATTTCTATAGTGCAACAAATCGCACAGGGAATGAGCTATTTAC
ATGCAAGGAAGATCGTTCACAAGGACTTAAaaacgaaaaatgttttccta
GAACACAATCAAAATCGGATTGTTATTACAGACTTCGGTTTGATTTCCAT
AGCTGACGTCAAAGTCACAAATACTAGGAAAAACCATTTGATGCTACCTA
AAGGATGGCTTTGTTATCAAGCCCCTGAAATCATCCGTCACCTTTCCGCC
CATGATCCAGGGTGTGAAGTATTATATTACACTCGAGAGTCGGATATCTA
TGCTTTTGGCACGATATGGTTTGAGTTACTGGCGGGCGATTGGCCCTTTG
CGaagcaatcgaaccaatctatcATTTGGCAGATAGGAAAAGGTGTCAAA
CAAAGTTTAAGTGATCCAAAATTAACGCGAGAAGGATTGTACGTCACTAG
GGAAACTAAGGATATAATTTCAATGACTTGGGCTCTGGACCCTGAGAATC
GACCTCAATTTAGTGCCCTGCTAAAGGCCTTTGAACGGCTACCTAAAAAG
CGTCTAATTCGGTCACCAAGCCAACCGACTTATTTGACTCGAACAGCCAA
CGCGCTTTTGATATGATGAATAGAAACAATGTTGGGACATTGAGGTAAGA
TGAATTGAAACCTGATGGATTGTGTTGGCCATCACACAGTAGAAGGTTTG
CGTTcgcaaaagaaaaattgaagatgaTAGTGAAGGCCTCACATTGacga
ttttgagaaaaatgaaaaatgaaaaatgtgaaaCTTTTCATCATAAGTAA
TAGCAACGCTACATTTACTATACTGGAGCTTTCAAGGGAAGATAAACGGA
TAGAGTATTCTGTACAAGGTTAGATCTGGTTTTATGGcgatattgaaaat
tttgatccTCGCTGGAAGAAGGACCCTTTATTCTTACGATTTACACAATG
CAAGTTCTCAACAGACAGACTTTTCAAGTGTAAATTTGGCGTcgatttaa
aatcttaaatgacGAAACACGCGAAGTATCGCTTTCACACATTGTGAATT
GGATCTAGTAAAAATTTTNccccccccccgtttatttggaacctaagagt
aattgaatttcaaaggagcTCATAAAAACTCGACTCTCTTGAAAATTTAT
CAGTTTAAGTCTCGTGAGATATTGTTACCCTTGTAATTGTCtgaaaacga
ggcagtcgttgttcgtgatgaaatttatgaaaaagatcTATCGAAGGATA
AATTGAATGAGGCTCCAATGATGAAATAACCGGAGTTAAACTCCTATCTT
TTACTGAAAATAGTCTAACAACAATCTAATTTCGCCACTTTCAGGTGTTT
TCTGATcagaaaaatgacgtaattttgACTTGCTTATATCAAGAATTTAA
AGGTAGCGCTCAATTAATTTTTATCTCGAACAAAGCGT
Run BLAST on NCBI

transcript from alignment at scaffold_286:769567..785353+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00057214 ID=TCONS_00057214|Name=TCONS_00057214|organism=Clytia hemisphaerica|type=transcript|length=15787bp|location=Sequence derived from alignment at scaffold_286:769567..785353+ (Clytia hemisphaerica)
CGGATGAtgattatgcatgtaagttagCTCAGAACGAACTAATATACCAC
CAATGACGATCGACAATGATAACTTGACTATTACCAGTCTAATTAAATAC
AACTAACCCAACCAAAcatatttttagtcaaattcgATAAAACTTAATAA
CTGGGGCTGTTTCATTGAATATCCATACACAGGGGATGGACAAActtttc
aaggcaaaaataGTTCTTGAAAATGAGTAATGACATtacctggaaaatgg
caaaatttacaaaaaaatccttcggaaaaatatttttttaatacctTATA
GTGAGGGTTGACGAAtgaaaatcagtcttttaccaaTCTTTTCTAAAACC
CGCTGGAAGTTCTTCTTCGGATTTCACCCTGGAAATGTTCGACGTCCACC
CTGTAAGGATATAACTTGGAATGTCCCAATTACCacctagcctgtaccaa
acttaTCTTGGAGGAAAAGATACGCTAAAAAGTATGgtaaaaaaacatca
atcacCCGTTGGCATTCAGAATGGGGCTTGTCTGTACatagacccagtat
ctacggtcaatttcaaagttcattgctgaagcgataaacgtgagatactc
tggtacagagtagggTGGTGCAGGCTAATTATTAACTAAACTAATTTATT
CTTCATACAAACCAATTTCACATTGACATTTCTTCAATAACagactttta
aacaaaagataatcaagaaacttttaaaataatttacatAAAAACCAACC
AGTAATAATACCAAATTCTCTAtaacaaccaaaacaaacatTTGACTCGA
ATTTAAGAGTatatttgaccattttcctacgaaatagggtgtttttgagt
ctacaaagccttgaaatgttcttagctcgttcttaacattttggccatcg
aagcattatgttcttatatagtttgcagAAAACTAACGCAAAGCTACCAG
AACCCATAGAATCAATCATTTGAAACTTGTCAACATctagaaaatcagaa
aattcggAAAATCCTCAAGGTGCTCGATACGTAactgagaaatctaaaaa
agtttTAGCCGGGACTTTAGCTTATAACTAAGTCTAAAGAAGACGCAAAA
AAGCAAAAGCAAAACATAACAATAGACTGAAAAACAATCAGCATAATCTT
ACTAAGAGCAACTGACAACCAACCGTTACAAAAGTTACTGAACCGTCTAT
CTTAACTCCCCGATACATCATATTTTTACTTGCTATTCACATGCATGTAG
AAAAATATAAGGCTGGACTAAAATGTAGGTTTTCCGTCATCTGACCACTG
ACCTTCATATATTCctagaccaagctatatccgccatcgttgatcggagt
ttttttggaattggtacccgagaagaagacattgcaatgttaaaaattaa
cgtctaacggcgctacatcatcaaaagtattcgaggaaaagtagatctgg
cgctctcgatgcattttcaccgctattgagtagtgccgctattagggtac
caatttcataaaaattccgattaaaaatttttggttggccgggattgagt
cACTTGGTCCAGGGTCCAAAGGTCAGTGCATCCGACCTCAAAACCCTCCA
AAAAAACCTTTTCTTCAAATCAGAACCTCTAATGTGTCCGAAAGTTTATG
AAAGTTCAATTTACATTTGggtaatagaccttatcggagtttttaatttt
tctaaaaaagcgatgtgggattgtttcgagtgtattacaatagaaatctc
ttaggaactCTCTATTGCCCAAATGTAAATTGAACTTTCATAAATCgtca
aaataaaagatttttccgACCAGGTGACCCACCTCCTAAAACTAGGTTCG
GGTGACggtaaacaaacattttaaaCAAAGTCCAACCTTAAATGAAACCA
GCCACCTTATCGGAactaattttcagaaaattgcatttcgcgggtttcgA
TTTCTGCGGTTTTtcgaaaaaacacgaaaaatgctaaaattaattccctc
GAAAATTAGACTATATTACACTATAAAAAGTACAATAATCTTCTAactta
ttttgaagatttattttttcctttcctCTTCATCTCATTGAAATTGGATT
GATTATAACTGTTTGCTTTTACAGAATCACGGAAGTTTGATGTCAGAATG
GGTCATTCCTTTCAGTCAAATCGAAATCGGTGATCACATCGGTGTTGGAA
GGGTTGGCAAAGTTTACAAGTAAGCTTtattgaaagatattttcataTCT
GCTTTTGCCTATCAGTCTATGTTGCTCTTCGTACGTGGGCGTGTCTATTT
GCGGGGTAGACAGTCTACTTTTGCCTGTCAGTCTACGTGGCTCTTCGCAC
GTGGGCGTGTCTATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNTAACTAAACTAATTTATTCTTCATACAAACCAATTTCACATTGACATT
TCTTCAATAACagacttttaaacaaaagataatcaagaaacttttaaaat
aatttacatAAAAACCAACCAGTAATAATACCAAATTCTCTAtaacaacc
aaaacaaacatTTGACTCGAATTTAAGAGTatatttgaccattttcctac
gaaatagggtgtttttgagtctacaaagccttgaaatgttcttagctcgt
tcttaacattttggccatcgaagcattatgttcttatatagtttgcagAA
AACTAACGCAAAGCTACCAGAACCCATAGAATCAATCATTTGAAACTTGT
CAACATctagaaaatcagaaaattcggAAAATCCTCAAGGTGCTCGATAC
GTAactgagaaatctaaaaaagtttTAGCCGGGACTTTAGCTTATAACTA
AGTCTAAAGAAGACGCAAAAAAGCAAAAGCAAAACATAACAATAGACTGA
AAAACAATCAGCATAATCTTACTAAGAGCAACTGACAACCAACCGTTACA
AAAGTTACTGAACCGTCTATCTTAACTCCCCGATACATCATATTTTTACT
TGCTATTCACATGCATGTAGAAAAATATAAGGCTGGACTAAAATGTAGGT
TTTCCGTCATCTGACCACTGACCTTCATATATTCctagaccaagctatat
ccgccatcgttgatcggagtttttttggaaTTGGTACCCGAGAAGAAGAC
ATTGCAATGTTAAAAATTAACGTCTAACGGCGCTACATCATCAAAAGTAT
TCGAGGAAAAGTAGATCTGGCGCTCTCGATGCATTTTCACCGCTATTGAG
TAGTGCCGCTATTAGGGTACCAATTTCATAAAAATTCCGATTAAAAATTT
TTGGTTGGCCGGGATTGAGTCACTTGGTCCAGGGTCCAAAGGTCAGTGCA
TCCGACCTCAAAACCCTCCAAAAAAACCTTTTCTTCAAATCAGAACCTCT
AATGTGTCCGAAAGTTTATGAAAGTTCAATTTACATTTGGGTAATAGACC
TTATCGGAGTTTTTAATTTTTCTAAAAAAGCGATGTGGGATTGTTTCGAG
TGTATTACAATAGAAATCTCTTAGGAACTCTCTATTGCCCAAATGTAAAT
TGAACTTTCATAAATCGTCAAAATAAAAGATTTTTCCGACCAGGTGACCC
ACCTCCTAAAACTAGGTTCGGGTGACGGTAAACAAACATTTTAAACAAAG
TCCAACCTTAAATGAAACCAGCCACCTTATCGGAACTAATTATCAGAAAA
TTGCATTTCGCGGGTTTCGATTTCTGCGGTTTTTCGAAAAAACACGAAAA
ATGCTAAAATTAATTCCCTCGAAAATTAGACTATATTACACTATAAAAAG
TACAAATAATCTTCTAacttattttgaagatttattttttcctttcctCT
TCATCTCATTGAAATTGGATTGATTATAACTGTTTGCTTTTACAGAATCA
CGGAAGTTTGATGTCAGAATGGGTTATTCCTTTCAGTCAAATCGAAATCG
GTGATCACATCGGTGTTGGAAGGGTTGGCAAAGTTTACAAGTAAGCTTta
ttgaaagatattttcataTCTGCTTTTGCCTATCAGTCTATGTTGCTCTT
CGTACGTGGGCGTGTCTATATGCGGGGTAGACAGTCTACTTTTGCCTGTC
AGTCTACGTGGCTCTTCGCACGTGGGCGTGTCTATATGTGGGATACACTG
AGGTCAGTCACGTTTTTTGACATACCACGGAGGTCCTTCAAATTAACcaa
tgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcg
ttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgtctgtt
taggcttaaaactcaaagtaaaagtaaggcttcaaaaaattgtggatgtt
tttataaaacaaGCTACAGGCTGAATAGACCTATAATGTattaagaaaat
agaaaaaaatagcaataatagtaagaagaaccaatatacttttggagatc
aagaaattaatgatgaaaaaaaaaactgaaaaatccTAAAAGACCTATTT
TTAGGAAGTTctcggcccaaatttgcctaaaaagATTCAAAATCGAGATC
GAAAATCGTTACATTTTGGGTATttccattttgcatcattgtgctagaaa
tcagaaaaaaactaaagagCCAATCGCGAGAAAACAGACGAACAGACATG
GGTTAATTTGAAGGAGTTCCGTGGTAGGTCTAAAAAGTTctcatagcgtc
agccccctgCTAGTTggggggttacaccctaaatctttcccaaaaaagga
gggggctggaagtacaccacttttttttttgggggggggctatgttattg
gggggagctaaaatctcatcacttaaaTTTTCGCCCGCGGCACAATATTT
ATATAAAAactgtgcaaaatattttatcttaaacttagaactgaatgcaa
tttacattggaaaacccttttttactggatcaattgtttgaaagtgtcta
gggtcaaaagtctGGGGGGCTAGCAAAAAATTCttaaatctttgggggga
cttaaaactctTGCCTgtgacctaaacccaggctgacgctatggtttttg
acttgtttttattttgaactcaaataaaaacagaaattttatcgtgtttt
gaaaatttttttacgcTTTCATGAAAACATGACGAGGCTTCTGTTATTGT
ATTTAGAGAGTTTATTGTTAACAAGAGATCAAGCGATGTAAATTTTCAGT
AACCTAACTTTTAACTGGGccgattcactttttttttagcAGCCCCTCAT
TCTCTTTGTTTCATTAtcttatttctttttaatacttCAGACAATACATA
GTTCGCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGGGGGGGGG
TGTGGGTCAAACCCTTTTCCGCactattcaatatttttctcaaagcaTTC
CATAACAACTTTCGATATTTTTTACTTAGAGCAAAATGGCATGGGGAATG
TGCCCTCAAAGTTTTATACTTGGAAAACCCAACTACGGAAGAGAAAAATG
ACTTCAAATATAAGGTAGGTCATCACATCGCGTATTTCTTTACCACCTAT
TTGTATTTCTATTCTTccttcttgaaaaaaaattgaaaatcagaGAGGTC
ATGCCTCACTGTGTTACAGTCGGTCCTTATATGGTTTTATGCCGATTTAT
TGTAAATAAAGTAGAGGAATCACTCATGATGAactctttaagtgccacgg
tcatttctttctaagttttttaagaaaatcgttagttcaaactttaaagg
cttatagaggagttagaagcttgtgcatagctcgttggatagttTAGAGT
CTCCTTTCTTTTATGCGCTTTCGGCGCCGCCCANCAAACTTTAAAGGTTT
ATAGAGGAGTTAGAAGCTTgttcatagctcgttggatagtttagagtctc
ctctttcttttatgCGCTTTCGgtgccgcccgatttaggaagggcggaGT
GGGCGGCCGCTAAAGCTgcgcggacctgcctgaataatagaaaggtgccc
agttgTAAAACTTCAAGCTAATTCGCTgaagacagaatcaagtaaagcag
ggccaaatttggaggttcttggatcactcgttgaccaaaaatggtcaaaa
acggtaaaaatcttaaaacagttgatttttgtcaaatttttgcatatttt
tttgactttttagcttaaaatctcgctgaaaagactaatttttgatgttt
tttttgcttgaccatgaagcccaatccaattaCTACGAGTTAGGCCAAAA
GTGACTATTTCTAACTTAAACTAGGCTAGCCCATGACCAATATACTCGCC
GTTGgaacttaaagggttaaaggttttgtttttaaataagagtgatatcg
tttgcgtACTCATCAACTTTGGATTAACAcggaatgtggagcaagattgg
tcagaaagaggaaaagaaaaacaattttttatcttaatataacaataaac
agacactgtcctgatatgaaatatgtgtctgatatgaaacgggagcactt
actgtatataaaaattaaagagcttttaaaaaaagattaaatttctcatg
attattgaaaaaagaaagaaaattaggtaaaaaaagGCTGATTTGCGTAA
TTCAATCTAcgcgaaaatttgaatttgtcgatttgcaaaaaaaaagaatc
caCGTTAAGATATGAACTTATcgtaaaaatttaatatttcacagaaaagt
gctagcaTATCTTCCGAATGACTTttccgtttgccttgaaatttgacatc
cttcttaacctaaggttgaactaccactggtgtaaaaataaaCGTTGCTG
CATAAGTagaatcgcaaatttaaccgctaaaaatcgcgaatttttcaacc
aaaaatacattcaaatatagcgcttttgattctctaaaacaagcaaacaa
caTTTTCgaaattatatttgactatcaaaagttacaggcaatcttgtttc
cactgccaattatatctagATAGACTTTAGGTATGATGTTTACATTTTGT
TCTAGGTACAAGTATTACGGCGTACGAGACACGAAAACTTAGTTTTGTTC
ATGGGAGCTTGTATGGAACCTGCAACCCTTGCTATCGTTTGCTCGTAAGT
CAAATCTTAAGTATCTGCAGtgaactttctctaattcgatttttaaagga
aatcggattttcatcgaaataAGGGAGCGAATCGAATGGCGTAGTGTCGT
TTTTTATGATACAgatgacgctctctaattcgatcttccaggagaattgg
attttcatcgaataagggagcttatcgaataagggagtttatcgaataag
ggagcgtcgtttatgagagtttcttgttgacctTGACTTCCGATATTATC
AAATAATGAAGCGTAACGAATAGTAGAACTAGAATTAGAGAGCGTTAACT
GTATTTGAGCTAATGTAAAATGTATCAATAATTCCGTCTTCTGGTGTCTT
CTCATGAGTAAGTGTAGAATACATAAGTAATAATTTTCCAATGCAGCTTT
TTGAACGAGAAAAAGTAAGTGAATCTGCGACCGcggtcggaggcgacccg
aaggctcctttttcgcccttgatcattctcttaattgctgagcatcaatc
agaaaggcatcaagtaccatttttgtctttggtatgacccgttcggggat
tgaacccacgagCTTGTGCACCGTAGCCGGTATGCTCCACCTTTGCACTA
CGGGCGCTATTAAAGGGACAAACGTCCGTAACGCCTCCTCATGAGTTCCA
CCtgtttttcatatatttttattcaatgttTCTTAGGTTTATCAAAGGGA
TGTCCCTTTATTCACACATTCACGTTCACGAAAccaaatttgatgacgtc
aaaaTCATTTCTATAGTGCAACAAATCGCACAGGTATAATATTCCTTTCA
CTtttcaaatacaaaaatgaaTGCTGGTAAAAATGTATCCAATCGTTTGA
TaatactcttttgtgcttaattgtagggggagTCACTTTgcattttttcg
gaaaaaatcacTCAATAGCATTTTATAATGACCTGGGGGAGCCctcattt
ttatgaattttcctgaaaaagtgccaaaacctgGATTTTCTCCCAGAGTA
CCAACCCCCTGTTTAGTACACCCCTCCCCCCTCTACAATTAAACACAAAA
GAGtagttttgtttggttttggTGAACGTAGGtagttttgtttgattttt
ttaaaccaaGTAAGACAAAGAAGCGGAAAACTCAGGAAATTTTCTTTTGg
cgaaaacaaaacttttaacaaaaatcgCGAAAGCTTTTTCACTCAGCttt
aaatgtcaaaaaaatcCGAAGTCTATTTCGCCCTAAGCTTGGgaataaat
tattttattattccTCTTTCCATTATGAggatgatatttttttttcttcg
atggACTAGACattattcagaaaaaaaaatactttgaaaattatatttta
ttcattttccctAGCCATTCGTGAAATTTTTGTCCGTTGggttcttccag
aaaattttgtacatggggggggggggggNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNgggggggggggggatagaGGATATATT
TGGATAATTGGATATATTGTCCCGGGGGGATGTAAAatatctgcaaaatt
tgccCTGTTTTGGGAAAAATATGCTCCTGTTTAGGGGTAATCTTAAATGT
CCGGGTCAACTGATGCCTGTCTGAGGGGTAAGGTCTGTTGTCTGGGGGGG
TCATAATTCACTATGTTCGGGGTTAGTTTTCACAAAAAACGTTATCCTTC
ACCCccatattcaaaatttttctggaaaagcccattaaagATCACGTTTT
tccgttaatttttttttcaaaaagtaaaaattcgtGAAACTTTCTATTCG
TGAAACTTTCTATCCTTATTAAAGTTATGTGTTATTGATtgtatcttcat
tttttttcatcgtAGGGAATGAGCTATTTACATGCAAGGAAGATCGTTCA
CAAGGACTTAAaaacgaaaaatgttttcctaGAACACAATCAAAATCGGA
TTGTTATTACAGACTTCGGTTTGATTTCCATAGCTGACGTCAAAGTCACA
AATACTAGGTaacaaagtcgacataatgtcgtacgtcaaatatcgaactt
gttttcacccgccattacttgccttactcgccattacCCTCGCCACTTTA
ACCGTAGcagtagagaattccagatacataatctcgctattgaATTCATG
ATacgcaccactggagagtcttctaagaacttttaaaattttccacccaa
tacgtcactttttctattttttttttttaaatataatctacctaggtcta
gcgcaaataaaaaaagggatagactccctcactcccaccagatgaatata
cttactttacTTACTATTCAGGAAAAACCATTTGATGCTACCTAAAGGAT
GGCTTTGTTATCAAGCCCCTGAAATCATCCGTCACCTTTCCGCCCATGAT
CCAGGGTGTGAAGTATTATATTACACTCGAGAGTCGGATATCTATGCTTT
TGGGTAGGTATTTTACAGGGCTACCTTAATACAATAATGATTGTGAgagc
tgtactgagaaatattgcccgaggtcaagtaacgaccgagcttgcgttta
actttttatttaaccGTTTCCTtaagcttcgattgatttttcgtgtttta
tccagaagaaaagcaaaaagagcaaaaaaaaacaggcgaaaaaagatcaa
aaattgttttaatttgtGACGTCAGAAAAGAAAACCAAAGACAAATGATG
TCAACGTAGTGTAACATAGtgttatgttatgttatgtatgttttcctatg
aaaaaactgacgtcacaaTGTCACAATTTTcttaacgacgggcaactctc
cgcagtgtaggcccgtcgtcacgggaaaagaaccaattgcattgtgcaaa
aagccatgtagccagcttcgaaaaagtaaccggctGACAATTCCTGTTAA
TAAAGGTCTTGGTCCACTTAAAGcgaatttcattaaaatgaaacaTAGCT
CTAGCAGGGATCCCACTCCTCctaaaattcaacaaattctCCTAAATtcc
taaaatctgaaaaatttctCAAGCACGGTAGCTGATTATGTTTGTATATT
TGTATAATCAGACAAGAAACCAAGATTTTTTCCTCAGtaaagtcaaaaca
aactgcaAGCAAGCTGCCTGACCTTGAAACAACAtgtttaaaatgtattt
ttgcactgaaatatttgaaacaaaagCCTATGTTTATGGTTTGGTGGTTT
GCGCCCTCATCTGTGAATTTTTTACTTGAGCATAGGCTTTATTACAATAC
AATGCCTTTCCCTGTTTTCTACTATTCTTTTGTTTCGTTTaagcaaaaat
gaaaagaaattatgAACGCTGGCACCATTTTCTAAATTCTCATTACAAAT
GTTCTAAATAATCTGTCTTGCCATTCTCTTTCATCTGCTATCATCGTCTA
TTTTTTATCTATTCAATTTTTGGAAGATCTCAAGATGAGTTTTTTACATT
GCCGTAGGAAGCAATTTtatattggggggggggagcTGAAgcttagtgac
accgcgaggaccaaccatggtttggcccgacgggaaaattttgaaaattt
gatctctagattgcttgaaaatgcactcagaATAAAATGCTTTcgagaac
aaattaaaaattaaaaaagaaaaacttttgaaaaaattattgggggggca
tagcccaTAGCCATTGGTCTCCAAACCTCgtctcttttttatcttttcaa
tttttgatctAAAGATGAGTTTTTTGGTAACTAGCCTTCTGTTGAAATAT
CTTTtgttactttgaataaaatcagtCTATGTTGCTcagattacatttca
aatttgtcCCAGTTTTTCTAATTCAAGATgccttttgttaatatttttga
tcTTCTAAGTTAGCAGTAAGTATGACTGGTGATTTAGCCATAATGAGAGA
ATTTCTTTTAGAACGAATAATACATATAAACTAACTACATAAagtagttt
aattttttttacattatttcAGACTTCCTGTTGGTCATTTTTTTTTCGGT
AGAACATTTTTCTGATTGCTGACTTCAGGtcgattttagaaatttatttc
ttaaattttcctaaaatcctcctaaaaaattgaaaattctccTAAAATAT
GACCAAAATATGACCAAAATCCTCCTAAAATTTGTCCTAAAATTTAGATA
TTCAGGCGTGGGATCCCTgatctagtttagacggccgactttctgccctg
cctattctaattgttacagtaggcagaaagtgggcacaaagttggcagtt
aaaacctttgcttggaaaatattaaaagtagtcattgcattgacgtcaaa
agagggcaatgcattgactgtagacagcccactttatgccaactttaatt
cacaattagaataggcagggcgaaaagtgggccgtctaaactagagcatA
AATACGTATACTCGTGTTTTCTCTTCAAACCATTCATTTATTTGGCTTTG
TTCTTTTCCAACAGCACGATATGGTTTGAGTTACTGGCGGGCGATTGGCC
CTTTGCGaagcaatcgaaccaatctatcATTTGGCAGATAGGAAAAGGTG
TCAAACAAAGTTTAAGTGATCCAAAATTAACGCGAGAAGGATTGTACGTC
ACTAGGGAAACTAAGGTAAGTAAATTTCGTCGTTTAAAAATAGCCTAGGC
AAAACTAGTGGCAAATACCCGGTCTTTTTGGGAGCTTCCGTataaaatat
tacgtcatgaatatatCATGAATTCCTGAGGTGTGTCCAAagtttctttt
tggacctaccccggtggaggtcctataaattaacctttgtccgttcgttc
gttcgttcgttcgttcgttcgttcgttcgtttgttgggccaaaaaacggc
taaaaaacgggtttttttggactttgtgaaaaataaggtcgttaattttt
tctgattttttccatgaaagtagggtaccatcgtaggtaaaagatggatt
tagcagatttttgcaaaaaaaatttgttggctcaaaaaacgcatgtttat
ctataagaatcactattaataagcatacatcaatgttcttagtcaaaNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNattacttaggtattagc
ttttctcgagattggctctttcattctttatgattttttgcacaaagatg
cataactataaaccctcgaatgtggcGGAGCTCGattatttgaaaaacaa
ttttggGGTAaacttcagctaaaaaacggctaaaaaaagggttttttgga
cttgttattttctgactttttgcatgaaagtaggtaaaagataaaacgca
tatttatttataaggatcactattaataagcatacatcaatgttcttaaa
attactgaattttttgatgagatatgtttttttgctctcgaagtcttgaa
tatgaaagaatatttcaagagcatgaaattttggtttctaaacgtgtttt
ttatgagaaacaaacgactaattttaatagatcgtcactatttgtgttct
gaatgattgtttaatggtcacgcttagtagatatcaattatatatgtgtt
aaatgcataaccaggtaggtccataaaagtatcacttgtttaaatATCCC
TTGCTCAGCGAATTATAATCATTATTGGAATGGAAAACTTTGTATTAATT
TTGTGAATGCAAAGATCTTTCTATGGACCATTTTCACAGTTTTTGTTGCA
GCCGGTCGCCATTTTTAGAAACAggtaaattttaaagaaaactgCTATAA
AAATGTCCGTTCAAGTCTTTATTCTAAAGATCGATGTTGCTACAGAAGGC
ATTGTTTTAAGatgtattttttttctcgccAAAACATCATGATAGTCTGG
GTACCATTTCAAGTAGATCCAGTGGTCAGTACCACATACATAGTTATATG
AGATATAAAAtaacttttcagaattttttcatACCACCATCCCattttaa
agaaatgaaaagccACACACATGTACTAaagcatttgttttgaaaaaaat
cttttgaaaatcgctcattttttgtacaaaatgtACTAAAATTTGTCAGG
TTGTAAGTTTTTCATCGTGATGTTTGAGTTTTTAGCACTAGCTTCCCATG
AGTAGAtttcgccttattaggagagtTTCTTTGTAAATCTGTTAATCTTT
CTTCTATAGGATATAATTTCAATGACTTGGGCTCTGGACCCTGAGAATCG
ACCTCAATTTAGTGCCCTGCTAAAGGCCTTTGAACGGCTACCTAAAAAGC
GTCTAATTCGGTCACCAAGCCAACCGACTTATTTGACTCGAACAGCCAAC
GCGCTTTTGATATGATGAATAGAAACAATGTTGGGACATTGAGGTAAGAT
GAATTGAAACCTGATGGATTGTGTTGGCCATCACACAGTAGAAGGTTTGC
GTTcgcaaaagaaaaattgaagatgaTAGTGAAGGCCTCACATTGacgat
tttgagaaaaatgaaaaatgaaaaatgtgaaaCTTTTCATCATAAGTAAT
AGCAACGCTACATTTACTATACTGGAGCTTTCAAGGGAAGATAAACGGAT
AGAGTATTCTGTACAAGGTTAGATCTGGTTTTATGGcgatattgaaaatt
ttgatccTCGCTGGAAGAAGGACCCTTTATTCTTACGATTTACACAATGC
AAGTTCTCAACAGACAGACTTTTCAAGTGTAAATTTGGCGTcgatttaaa
atcttaaatgacGAAACACGCGAAGTATCGCTTTCACACATTGTGAATTG
GATCTAGTAAAAATTTTNccccccccccgtttatttggaacctaagagta
attgaatttcaaaggagcTCATAAAAACTCGACTCTCTTGAAAATTTATC
AGTTTAAGTCTCGTGAGATATTGTTACCCTTGTAATTGTCtgaaaacgag
gcagtcgttgttcgtgatgaaatttatgaaaaagatcTATCGAAGGATAA
ATTGAATGAGGCTCCAATGATGAAATAACCGGAGTTAAACTCCTATCTTT
TACTGAAAATAGTCTAACAACAATCTAATTTCGCCACTTTCAGGTGTTTT
CTGATcagaaaaatgacgtaattttgACTTGCTTATATCAAGAATTTAAA
GGTAGCGCTCAATTAATTTTTATCTCGAACAAAGCGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036045XLOC_036045Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00057214-exon-scaffold_286-1491911889:769567..769584TCONS_00057214-exon-scaffold_286-1491911889:769567..769584Clytia hemisphaericaexon
TCONS_00057214-exon-scaffold_286-1510915933:769567..769584TCONS_00057214-exon-scaffold_286-1510915933:769567..769584Clytia hemisphaericaexon
TCONS_00057214-exon-scaffold_286-1575043694:769567..769584TCONS_00057214-exon-scaffold_286-1575043694:769567..769584Clytia hemisphaericaexon
TCONS_00057214-exon-scaffold_286-1491911889:771691..771707TCONS_00057214-exon-scaffold_286-1491911889:771691..771707Clytia hemisphaericaexon
TCONS_00057214-exon-scaffold_286-1510915933:771691..771707TCONS_00057214-exon-scaffold_286-1510915933:771691..771707Clytia hemisphaericaexon
TCONS_00057214-exon-scaffold_286-1575043694:771691..771707TCONS_00057214-exon-scaffold_286-1575043694:771691..771707Clytia hemisphaericaexon
TCONS_00057214-exon-scaffold_286-1491911889:774079..774156TCONS_00057214-exon-scaffold_286-1491911889:774079..774156Clytia hemisphaericaexon
TCONS_00057214-exon-scaffold_286-1510915933:774079..774156TCONS_00057214-exon-scaffold_286-1510915933:774079..774156Clytia hemisphaericaexon
TCONS_00057214-exon-scaffold_286-1575043694:774079..774156TCONS_00057214-exon-scaffold_286-1575043694:774079..774156Clytia hemisphaericaexon
TCONS_00057214-exon-scaffold_286-1491911889:775846..775930TCONS_00057214-exon-scaffold_286-1491911889:775846..775930Clytia hemisphaericaexon
TCONS_00057214-exon-scaffold_286-1510915933:775846..775930TCONS_00057214-exon-scaffold_286-1510915933:775846..775930Clytia hemisphaericaexon
TCONS_00057214-exon-scaffold_286-1575043694:775846..775930TCONS_00057214-exon-scaffold_286-1575043694:775846..775930Clytia hemisphaericaexon
TCONS_00057214-exon-scaffold_286-1491911889:777422..777510TCONS_00057214-exon-scaffold_286-1491911889:777422..777510Clytia hemisphaericaexon
TCONS_00057214-exon-scaffold_286-1510915933:777422..777510TCONS_00057214-exon-scaffold_286-1510915933:777422..777510Clytia hemisphaericaexon
TCONS_00057214-exon-scaffold_286-1575043694:777422..777510TCONS_00057214-exon-scaffold_286-1575043694:777422..777510Clytia hemisphaericaexon
TCONS_00057214-exon-scaffold_286-1491911889:778203..778299TCONS_00057214-exon-scaffold_286-1491911889:778203..778299Clytia hemisphaericaexon
TCONS_00057214-exon-scaffold_286-1510915933:778203..778299TCONS_00057214-exon-scaffold_286-1510915933:778203..778299Clytia hemisphaericaexon
TCONS_00057214-exon-scaffold_286-1575043694:778203..778299TCONS_00057214-exon-scaffold_286-1575043694:778203..778299Clytia hemisphaericaexon
TCONS_00057214-exon-scaffold_286-1491911889:779832..779974TCONS_00057214-exon-scaffold_286-1491911889:779832..779974Clytia hemisphaericaexon
TCONS_00057214-exon-scaffold_286-1510915933:779832..779974TCONS_00057214-exon-scaffold_286-1510915933:779832..779974Clytia hemisphaericaexon
TCONS_00057214-exon-scaffold_286-1575043694:779832..779974TCONS_00057214-exon-scaffold_286-1575043694:779832..779974Clytia hemisphaericaexon
TCONS_00057214-exon-scaffold_286-1491911889:780288..780419TCONS_00057214-exon-scaffold_286-1491911889:780288..780419Clytia hemisphaericaexon
TCONS_00057214-exon-scaffold_286-1510915933:780288..780419TCONS_00057214-exon-scaffold_286-1510915933:780288..780419Clytia hemisphaericaexon
TCONS_00057214-exon-scaffold_286-1575043694:780288..780419TCONS_00057214-exon-scaffold_286-1575043694:780288..780419Clytia hemisphaericaexon
TCONS_00057214-exon-scaffold_286-1491911889:782431..782581TCONS_00057214-exon-scaffold_286-1491911889:782431..782581Clytia hemisphaericaexon
TCONS_00057214-exon-scaffold_286-1510915933:782431..782581TCONS_00057214-exon-scaffold_286-1510915933:782431..782581Clytia hemisphaericaexon
TCONS_00057214-exon-scaffold_286-1575043694:782431..782581TCONS_00057214-exon-scaffold_286-1575043694:782431..782581Clytia hemisphaericaexon
TCONS_00057214-exon-scaffold_286-1491911889:784376..785353TCONS_00057214-exon-scaffold_286-1491911889:784376..785353Clytia hemisphaericaexon
TCONS_00057214-exon-scaffold_286-1510915933:784376..785353TCONS_00057214-exon-scaffold_286-1510915933:784376..785353Clytia hemisphaericaexon
TCONS_00057214-exon-scaffold_286-1575043694:784376..785353TCONS_00057214-exon-scaffold_286-1575043694:784376..785353Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_286supercontigscaffold_286:769567..785353 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	1.32007e-05	0	0	0	0.504818	0	0	0.676829	0	0	0	0	0.201451	0.612362	0.244027	0.208458	0	0.676708	0.27757	0	0	0.478839	0	0	0	0.304797	0.62284	0	0
Blast
[Close]
BLAST of TCONS_00057214 vs. Swiss-Prot (Human)
Match: KSR2 (Kinase suppressor of Ras 2 OS=Homo sapiens GN=KSR2 PE=1 SV=2)

HSP 1 Score: 271.937 bits (694), Expect = 1.941e-79
Identity = 137/306 (44.77%), Postives = 195/306 (63.73%), Query Frame = 1 
Query:   31 LMSEWVIPFSQIEIGDHIGVGRVGKVYKAKWHGECALKVLYLENPTTEEKNDFKYKVQVLRRTRHENLVLFMGACMEPATLAIVCSFIKGMSLYSHIHVHETKFDDVKIISIVQQIAQGMSYLHARKIVHKDLKTKNVFLEHNQNRIVITDFGLISIADVKVTNTRKNHLMLPKGWLCYQAPEIIRHLSAHDPGCEVLYYTRESDIYAFGTIWFELLAGDWPFAKQSNQSIIWQIGKGVKQSLSDPKLTREGLYVTRETKDIISMTWALDPENRPQFSALLKAFERLPKKRLIRSPSQPTYLTRTA 948
             + EW IPF Q+EIG+ IG GR G+VY  +WHGE A++++ +E    ++   FK +V   R+TRHEN+VLFMGACM P  LAI+ S  KG +LYS +   +   D  K   I Q+I +GM YLHA+ I+HKDLK+KNVF  ++  ++VITDFGL SI+ V     R++ L +  GWLC+ APEIIR LS  D   + L +++ SD++A GTIW+EL A +WPF  Q  ++IIWQ+G G+K +LS        + + +E  DI+   WA + E RP F+ L+   E+LPK+   R  S P +  ++A
Sbjct:  655 FLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVF--YDNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSP-DTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLSQ-------IGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN--RRLSHPGHFWKSA 948
The following BLAST results are available for this feature:
BLAST of TCONS_00057214 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KSR21.941e-7944.77Kinase suppressor of Ras 2 OS=Homo sapiens GN=KSR2... [more]
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