TCONS_00057246 (transcript) - C. hemisphaerica

Overview
NameTCONS_00057246
Unique NameTCONS_00057246
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2027

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00057246 ID=TCONS_00057246|Name=TCONS_00057246|organism=Clytia hemisphaerica|type=transcript|length=2027bp
ATTCAAACAGACAAGTCTATGGACATTAATGTGAACCAATTATTCATCAA
AGGTCAAGCAAAGTGGATATTGGATAGTGTAACCAGTGATTTAAACCATC
AACTGAATATTGAGCAAGCATGCCGAATGCTACAAATCATAATCACCGAT
GAAGCTGTATTAACTTACTTATTGAAACATGTTCCAAATATATCCATTTT
GCTGACTGCAAATCAAAGTCATGCGTCAAAAGAACAGCTACTTCGTTTGA
TATTGCTCATGCATTCTTCATTGAAAAAGACCACCACATTCaaGCTTCCG
TCAGTCCAGACATTGCAAACTGAATACTTGAAACTACCCCTCGATGAAAC
CGAAGATAGATACGAGCAATCAATACTCTTAACAAACGAATCTCTTTTCT
TtctactaatatctttccaacaatcaCAAAACACCAAAGACAACAATTTA
TTACACCAGCAATTTGCTAAAAAAATGATAACCACAAAAACCACATCACC
AGACATAGAATTGCCAATGAAATATGGATTCTATGATGGTTTAATAtcat
tatttactcaaatagaGGGTTTATGCGAAGACTCGATTCTCCAAATCTTA
AATCAAATCATATATTGTTTGGCTGAGGACTCAATGGAAGAAGACCAACC
TTACCAATACTTCAAATGGAATCTGATATCCTATCAAAGCCTATCACAGC
TTGTTTCCTTACTGGTGAACATATTCAGTAAATTTCCAAGCTCTTTTTAC
AGCCGTATTGCAGAAAATGATTTACCGAGTTTAATGTTCGTTGTAAGTGC
ATTACTACAGATAAAAGATGacgaaaaagtgaaatattGTAGTGGGAATG
GTCTCACGGACAATATAGATAGAGTGGACACACTTACTGAAAATGTGATT
AAAATTCTATGTCTTCCGTTTGCGTTGGATCTTGATCAAANGAAAATGTG
ATTAAAATTCTTTGTCTTCCTTTTGCATTGGATCTTGATCAATGTCTCTT
GTATGAGATTCTATGTTCGTTATATCAAAGCTCAACTATAGGATCGCTGT
TTTTTTTGCTGTCTAAACCAAGTATGATTGACAACCAAGAGGAAACTTCG
ATTGTTGTAGGTTTGATTGCCCGTTTGGTGTTAACAGACGAGATGTTCAT
ATCGCAACTGAAAAGTCTTTTAAACGGACCGGAAAATTTTGATATGCTGT
TCAAAGATTTGTTGTTCTCAAGCAGCGATAACGCTATACGGTGTGATGTT
TTGGCTGTTATGAGTCATCTAGCGCGCCAGTCGGCTGATACTTCAAGAGT
TGTTTCAAGAATCTTTGAGCAAGAAAACGGTTTTTCAAGGCTATTTTTGT
TACTACACGATGAGGATTCAAGGCTAGTCGTTCGGGCTGCTATGGTTATT
GCAAACACATTGAAACACTCGAGTGATCTTTATGGAGATATTGTCAGGAT
GAAGGTCCATCCAACACTATTTGAATTACTTCAAAGTCAAGATGCTGCTA
TTAGAAAGGCGATAAGTTTAATCATTGGCAACTTGGCATACCACAATGAC
GAGTTGTATCACATTTTATCGAGTTGCATTTCCATATTGGTCCACTTATT
GAACGATAACATTCCAAAGATACGCTCCAACGCTGCTGttGCACTCGGAA
ATCTTGTCCGACACTCTCCCATATTATTTCCGACCCTGATTGAAAACAAA
GTTCCAGTACGtttaCTCGATTGCGCATGCTCTGATGAGGATACACAAGT
TCAAGAACATGCATTATGGGCTTTAAGGTTGTACTTCAGAAACACACAGT
GTAAAAAGATTCTTATCAACGCTGGTTTACAAGACAAATTGGATTTCTTT
ATGGCTTCATCTACACCGAGCAGTAGTAACGTCTCCAGAGCCTCGTCTGC
TCACAGTACGTTCAGTGTCAGTGCAAGTCGGCATTGCCAAAAGTTGCTGA
GTAAGATACCATCACTTAAAGAAGAATGAGTTCGAGTCTGTCAATTTTTA
TTCATTGAGCTATTTCCAGAAGATTGT
Run BLAST on NCBI

protein sequence of TCONS_00057246-protein

>TCONS_00057246-protein ID=TCONS_00057246-protein|Name=TCONS_00057246-protein|organism=Clytia hemisphaerica|type=polypeptide|length=316bp
IQTDKSMDINVNQLFIKGQAKWILDSVTSDLNHQLNIEQACRMLQIIITD
EAVLTYLLKHVPNISILLTANQSHASKEQLLRLILLMHSSLKKTTTFKLP
SVQTLQTEYLKLPLDETEDRYEQSILLTNESLFFLLISFQQSQNTKDNNL
LHQQFAKKMITTKTTSPDIELPMKYGFYDGLISLFTQIEGLCEDSILQIL
NQIIYCLAEDSMEEDQPYQYFKWNLISYQSLSQLVSLLVNIFSKFPSSFY
SRIAENDLPSLMFVVSALLQIKDDEKVKYCSGNGLTDNIDRVDTLTENVI
KILCLPFALDLDQXKM
Run BLAST on NCBI

transcript from alignment at scaffold_286:352967..360060-

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00057246 ID=TCONS_00057246|Name=TCONS_00057246|organism=Clytia hemisphaerica|type=transcript|length=7094bp|location=Sequence derived from alignment at scaffold_286:352967..360060- (Clytia hemisphaerica)
ATTCAAACAGACAAGTCTATGGACATTAATGTGAACCAATTATTCATCAA
AGGTCAAGCAAAGTGGATATTGGATAGTGTAACCAGTGATTTAAACCATC
AACTGAATATTGAGCAAGCATGCCGAATGCTACAAATCATAATCACCGAT
GAAGCTGTATTAACTTACTTATTGAAACATGTTCCAAATATATCCATTTT
GCTGACTGCAAATCAAAGTCATGCGTCAAAAGAACAGCTACTTCGTTTGA
TATTGCTCATGCATTCTTCATTGAAAAAGACCACCACATTCAAGTAAGAT
TTTTTTCTTCTTGAAACTGAAAAGGAATGAATCTTTGTAAAGTGGATAAA
TTTTCGCATGAACTTTTTTCGCGAATCAAGAATCTAAAAATTTCGCGTGA
ATCAGCCTCTTTTTTCACCTAATTTCTTTCATTTTCCTAGGGTTTTTGGT
CGAAATTGGGATTTTCAATTTTTCGCGAGAACTAAATTTCAATTCAATTC
AGCATTGCGGACGAAGTAAAATTTTAAACCAGTATGTTTTTATTCTGAGA
ACTAAATTTCGCGAAAATGGCCAAAATTCTCGAAAATTGCGAACATTCAC
CAGCCCGAAATTGAATCCACTTATTTGGATGTTTTATTGAATGCCTTCCA
ATGTTAAAAAGCTATTGTTTAAATGCTTTAAGGCTCCAGTGTCTTTAACC
TTGGAATCCCGGATCTGTTCTTTAGTCCATTCTGTTGCATTCAGTATAGA
TAATCGAATAAGCTACAATCTCGGTCAAAATATATTGAGAATTTTGGTTA
ATTTCTCGTTTTTAGCAGTTTAAAGTTCGGGCGAGAAAGTTGCTTTTGGG
CTATTTGATAAATTTATTCAAATGGTCCAACCTATTCTAGAGCGCTTCCA
AATCGTTTGTGGTGGTAAGAATTCGTGGGAATTTCCTTTTTTCTCAAATG
TTATGACTTCAATTGTAGCTTTGATAACAAACACAAAATGTACTTTTCGA
ATTCTAGCCATAAATGGGCCTGGTAAATTATGTAGGAAATATGTGTGGCT
TCAAATACTATATAGGAGATGAAGCTAGCCCCCTCAGCTATATTTCGTTC
CTTCTTTGTTCACAGGCTTCCGTCAGTCCAGACATTGCAAACTGAATACT
TGAAACTACCCCTCGATGAAACCGAAGATAGATACGAGCAATCAATACTC
TTAACAAACGAATCTCTTTTCTTTCTACTAATATCTTTCCAACAATCACA
AAACACCAAAGACAACAATTTATTACACCAGCAATTTGCTAAAAAAATGA
TAACCACAAAAACCACATCACCAGACATAGAATTGCCAATGAAATATGGA
TTCTATGATGGTTTAATATCATTATTTACTCAAATAGAGGGTTTATGCGA
AGACTCGATTCTCCAAATCTTAAATCAAATCATATATTGTTTGGCTGAGG
ACTCAATGGAAGAAGACCAACCTTACCAATACTTCAAATGGAATCTGATA
TCCTATCAAAGCCTATCACAGCTTGTTTCCTTACTGGTGAACATATTCAG
TAAATTTCCAAGCTCTTTTTACAGCCGTATTGCAGAAAATGATTTACCGA
GTTTAATGTTCGTTGTAAGTGCATTACTACAGATAAAAGATGACGAAAAA
GTGAAATATTGTAGTGGGAATGGTCTCACGGACAATATAGATAGAGTGGA
CACACTTACTGAAAATGTGATTAAAATTCTATGTCTTCCGTTTGCGTTGG
ATCTTGATCAAANGAAAATGTGATTAAAATTCTTTGTCTTCCTTTTGCAT
TGGATCTTGATCAATGTCTCTTGTATGAGATTCTATGTTCGTTATATCAA
AGCTCAACTATAGGATCGCTGTTTTTTTTGCTGTCTAAACCAAGTATGAT
TGACAACCAAGAGGAAACTTCGATTGTTGTAGGTTTGATTGCCCGTTTGG
TGTTAACAGACGAGATGTTCATATCGCAACTGAAAAGTCTTTTAAACGGA
CCGGAAAATTTTGATATGCTGTTCAAAGATTTGTTGTTCTCAAGCAGCGA
TAACGCTATACGGTGTGATGTTTTGGCTGTTATGAGTCATCTAGCGCGCC
AGTCGGCTGATACTTCAAGAGTTGTTTCAAGAATCTTTGAGCAAGAAAAC
GGTAAGCTATTTACCAACACCTGTTCTAATTGACAACTAGTCTCTTTGGG
AAAATATTGGCAGTTGTGGAAATCACTCTAAAGAGATTTAGTCTAAATTT
GCTAACATGGTTTCCACATATTAGCAAGTATATTTTATTTCTACTGACCC
TACTTTTAAAAATAGTTATCAAATAAAGGATAGTATTGGTAGGTTCCCAA
ATCATGGTCATTAAAAAATACCCTGGTCTGTAAAGGCTTTTGAAAACAAA
CGAAACATTTTTAAATTCTCCCAAATTCTCTTTAGCCCGGTCTGGAAGGC
TTTTGTTTCTTTCTTATTATATTGACAGTTAGAGCTTTTGTACGTAAATA
GATTTGCTTTGCATATTTTTTGATCATGTGACTAGAAAATAAACCCAAGA
ATCAAAAAATGGTAACGTGATCAAAAAGTGTGCATATCGCAACTTTCCTT
TTATTTACCTTATTGGTATATATTTTCGCGTGTTACAAATTTTCGCGGGT
ACTTAATTTCGTCAGTTTTTTGGTCAATTTTCGCGAAATTTAATACTGCT
TAAATTTTTCAAAATTACAAAATCGCGAAATTAAATACACGCGAAAAATT
TTTTCTTAGTATTTTGTTAGTTTTTTACATCAAAAACGTTGTGTTTCAAG
CAAAATCAGTCTTTTTCTTGCTTTATATTCCCACTTTCTGAAAATACCTA
GTTTAGTGAATCGCGAAATTTATTACACGCGAAAATTTTCCAGAAGTCGG
CAATCGCGAAATTTAATACACGCGAAACACGTTTTTTCGAAAAAATTTCG
CGATTCGCAAAAATCTGTAACACGCGAAAATATATACCAATAAGGTATAA
AAAATGAAAATTTGACAATAAAGCTAACACAATAGATTATTACCAGACCA
GGTTTTTTATAATGGCTACTAGATATTGCCAACTGTTACTTATAGGTTTT
TCAAGGCTATTTTTGTTACTACACGATGAGGATTCAAGGCTAGTCGTTCG
GGCTGCTATGGTTATTGCAAACACATTGAAACACTCGAGTGATCTTTATG
GAGATATTGTCAGGTGAGTAAATATTTCGAATTTTTTATCCTCTTTAAAT
CATTTCACGGTGATATGCAAACATGCTGTTATCTTTTTTGGTAACATTTC
CACAGGAAAAAGATTGGAGCAAGACTGGTCAGAAAGAGGAAAAGAAAAAC
ATTTTTTGCTTATATCAGCACAATATAACAATATGTAGACACCGCGTTTT
GATATGAAACTACTCCTGGGTTATTTGTAAAAAGACTTCAAAAATTAGAG
TGAAGTTTTTATGGTTCCCTTTTTACGCCGGTCCGATTGGAATGAATTTT
TAGCTTTTATTCTTTTTTCTAACTCGTCCTTGGCAGCTTACATCTTAGCA
AAGAAAGGGTTATTTGTGCGCCACCTTCCCCGGGAATAAAAGAAATATTA
AAATCTTTGTTTATATCTTTAATATTATTTTGTTCCCTTTTTCAGGATGA
AGGTCCATCCAACACTATTTGAATTACTTCAAAGTCAAGATGCTGCTATT
AGAAAGGTAGTGGCACATTCTACAGTTAAAAAAAAAAATTAAAATCACTG
GATATTACCTTAAGGGGGAGTAAATTTTCGCAGATCTAATTTTTTGGATG
TCTACCGAAAATTAGTTCTGCGAAATGCAATTTTTACTAAAGATCCTAAA
AAAAACCTAGGAATATGAAAGAATTTCGGCAAAAAGTGGGTGTTAACCGC
AAAAATTAGTTCCACAAAATGCGCCAATTTAGTATCCTCGCACTCTAGAA
ATAGGTTCCGCCAATATTAGTTCCCGCGAAAATTAGTTCTCTTCAGGTAT
TATGTTTTCATTTGCCACCCAATTATTTGATTTAGTGACCGTAGTGCAAA
GGTAGGCAACGTTGCGCAAAGCTATTGCTTCAATTTCCGGCCGTGTCATA
CCAAATACTTCGTACTTCATGCAAAAATAGTACTTGACGCGGCTGTCATA
GAACGTCAAAATCGCACCCATCTAAAACAACGTCAACAGACAGTCACATG
ACTTGCTTTTCAACTAACAAGATTTCATCATTTCAAAAGGAAGTCTGGAT
TTAGGACTGATCCTTACCTGACACGATACCGTGCTTATCCTACGGCTAAC
TATCTAAAAGTCCATTCAACAATCAATCTGATTGGTTAAATCTCAAAATT
ATCATGTAATCGAGCCAAATAAACCTGATAAACACTGATGTGCTCATCAG
AAAAGCTTCAGCCTTAAGTTAGCCTTGAGTATAGCCCTTTAAGGTGATCA
TTTTTCACGGAGATTAAATTTCGCGGATTTCGCGGATTTCGGTTTCACCC
GCGAAATTAAGTCCCAATGTAAATCTGGAAAGGTCTTATCCGCGAATTTC
TTTAAAAAAAAAAACTCAAAAAATGTCAGATTAAAGAAGCGCTAATAATG
CTGATTTTGACAACGAACATATATGATTTGGCAGTATAAAGACACGAAAT
CTTGAAAATATTATCTCCCGATGATGTAATCCGCAAAATTAAGTCCCCGC
GAAATCTTAAAATAGTTTCACCGGTGAGCTTGACCGCGAAATTTTATCCC
CGTGAAAATTTCTCCCATTAAAGTAGTTAGGTGTTGTTAATAGCAAAAAT
GACATCTTAATTTCTCATGATATTTTCATCCCACAGGCGATAAGTTTAAT
CATTGGCAACTTGGCATACCACAATGACGAGTTGTATCACATTTTATCGA
GTTGCATTTCCATATTGGTCCACTTATTGAACGATAACATTCCAAAGATA
CGCTCCAACGCTGCTGGTAGGTATTCATCATTTCCAGATATGTTATAATT
CTAAGATGAAGTCTTGTTTACATCATCAATTGAAATTGTCGCAATTAAAA
GTTATAGCCAAAACAGAGTCACAATAGGCTCAAACGCTGCCAATTGACGC
TGCTTCTTCTGAAATCTGTCATCTCTGCTATAAGCGTATGCTTTAATTTA
ATTAAATTTCGCGTGGATTTAATTTCGCGAACAAGCCTGAAAACAGCTGA
AAAAAATAATAGCTGAAAAAAATGGCCATTTTTTGTCACAAATGGATACC
TTAGACTGGTTTCTCCGCCGAAAATACGATTTTAAAGATTTTGTGGTGGA
TTAAATTTCGTGAGTCAGGAATCTCACTCGTTCGTTTTCGCGAGTTTAAA
TTTCGCAAAAATGGCAAAAATTCGCGAAATTGCGAAAGTTAATCCGATTA
ATAGTAAGATCCCGGAGGCAGTCGGTTTATAGATTGACGGTATGTGGGGC
CCGAAATTCAACATTTAAAAAAATAATATATAACTAATTTAACTGAAAAA
CACACTCTTCTATGTTTCCTCGAGGATTTCGGTAACTTCGACTTTTGTCT
ACTTTCGTTACTTTCATTGCTATCTTTTATCCTGATTCATATTTTTTTAT
CCTTTTGCTTTCAACTGAAACGTTCGTCCATTGAACGTTCAGCAGAAGTT
CCTTTCGAACGTTGAAACAACGTTTTGTTCCAGCTTGACTCGTCCAACCG
TCTATTCTGTATATTTCATTTTGTTTTTAGTTGCACTCGGAAATCTTGTC
CGACACTCTCCCATATTATTTCCGACCCTGATTGAAAACAAAGTTCCAGT
ACGGTAAGACTGTTCTTCCAATTCTACAGCTAAGCTTACACTGTTGTTTT
ATCCAGTTGGCTGCAATTACTCTGGCAGAAATATAACATAACAGGTGAAC
TCAGAGCCTCCCGATGAGGCCCTTGGGAGAGTTTTTTGGTTAAATCAAAC
TCTAATTCTGCAAAATTACATAGTGGATGTGGATAAAATAAGGGATTTAT
TTATATGAACTGCGTTCCCATTTTTATGCTCTTGTTATTGTTATACCGGA
TGTTTCAGAAAAAAGTGTTTGAAGTGAAAAAACTAAAAATGTTATAGATT
CAAACTTTTCACCATTTTAAAAAGGATAGACTAACGTGAATTTTGAGCTA
TTCTACTTTAAATTAGCTTCACGTGTTCAAAAGTTATAAAAGAAAATTCG
AAAAAGATATTTTCCGAAAAATCATCATAAGATTTAAGTTGGCCTTTCCT
ACTTTCTGATGGTGGAAAGTTTAGATATATAATATTTTGAGTTTTTTTCA
CAATCTTAATTCAAACTTGTAAATTTCTTTTGAAACACCTGGTATTTTGT
TTGTTTTTTTTCTTCAGTTTACTCGATTGCGCATGCTCTGATGAGGATAC
ACAAGTTCAAGAACATGCATTATGGGCTTTAAGGTTGTACTTCAGAAACA
CACAGTGTAAAAAGGTAACAATTATACTAATTTTAATGTGAGAAAAATCA
AAATATAATATCCGCATTCTTTTTCACCGTTCAACACACAGATTTTAATG
CGTGAATTCTTTTCATTTATCTAAGTGTAAGACAATCGGCTAACACTTTA
TCGAAATGGCAAGTATTGCCTTAACGGGAAATATTTCCCGAACGGAAAGA
TGGTGCTGCCTGCAATCATGATGTATGTTTTCTACGGAATGACCCGGTTT
TTTCTTTGCCAGTAGTGGCAAATTTAAGAAATTTTAGCTGGAGACAAACC
AAGCTGTTTCCGTGGAAAATATTACATCATGAATATCACGAATTGAAGAT
TTTATGATACTTTGTCGTGCAAAGTCCAGTTTTCCTTCTAAAACAAGAAA
CTTTGACCACTGTTTTACGTCACAGATTCTTATCAACGCTGGTTTACAAG
ACAAATTGGATTTCTTTATGGCTTCATCTACACCGAGCAGTAGTAACGTC
TCCAGAGCCTCGTCTGCTCACAGTACGTTCAGTGTCAGTGCAAGTCGGCA
TTGCCAAAAGTTGCTGAGTAAGATACCATCACTTAAAGAAGAATGAGTTC
GAGTCTGTCAATTTTTATTCATTGAGCTATTTCCAGAAGATTGT

Coding sequence (CDS) from alignment at scaffold_286:352967..360060-

>TCONS_00057246 ID=TCONS_00057246|Name=TCONS_00057246|organism=Clytia hemisphaerica|type=CDS|length=1902bp|location=Sequence derived from alignment at scaffold_286:352967..360060- (Clytia hemisphaerica)
GCTTCCGTCAGTCCAGACATTGCAAACTGAATACTTGAAACTACCCCTCG
ATGAAACCGAAGATAGATACGAGCAATCAATACTCTTAACAAACGAATCT
CTTTTCTTTCTACTAATATCTTTCCAACAATCACAAAACACCAAAGACAA
CAATTTATTACACCAGCAATTTGCTAAAAAAATGATAACCACAAAAACCA
CATCACCAGACATAGAATTGCCAATGAAATATGGATTCTATGATGGTTTA
ATATCATTATTTACTCAAATAGAGGGTTTATGCGAAGACTCGATTCTCCA
AATCTTAAATCAAATCATATATTGTTTGGCTGAGGACTCAATGGAAGAAG
ACCAACCTTACCAATACTTCAAATGGAATCTGATATCCTATCAAAGCCTA
TCACAGCTTGTTTCCTTACTGGTGAACATATTCAGTAAATTTCCAAGCTC
TTTTTACAGCCGTATTGCAGAAAATGATTTACCGAGTTTAATGTTCGTTG
TAAGTGCATTACTACAGATAAAAGATGACGAAAAAGTGAAATATTGTAGT
GGGAATGGTCTCACGGACAATATAGATAGAGTGGACACACTTACTGAAAA
TGTGATTAAAATTCTATGTCTTCCGTTTGCGTTGGATCTTGATCAAANGA
AAATGTGAATTCAAACAGACAAGTCTATGGACATTAATGTGAACCAATTA
TTCATCAAAGGTCAAGCAAAGTGGATATTGGATAGTGTAACCAGTGATTT
AAACCATCAACTGAATATTGAGCAAGCATGCCGAATGCTACAAATCATAA
TCACCGATGAAGCTGTATTAACTTACTTATTGAAACATGTTCCAAATATA
TCCATTTTGCTGACTGCAAATCAAAGTCATGCGTCAAAAGAACAGCTACT
TCGTTTGATATTGCTCATGCATTCTTCATTGAAAAAGACCACCACATTCA
AGCTTCCGTCAGTCCAGACATTGCAAACTGAATACTTGAAACTACCCCTC
GATGAAACCGAAGATAGATACGAGCAATCAATACTCTTAACAAACGAATC
TCTTTTCTTTCTACTAATATCTTTCCAACAATCACAAAACACCAAAGACA
ACAATTTATTACACCAGCAATTTGCTAAAAAAATGATAACCACAAAAACC
ACATCACCAGACATAGAATTGCCAATGAAATATGGATTCTATGATGGTTT
AATATCATTATTTACTCAAATAGAGGGTTTATGCGAAGACTCGATTCTCC
AAATCTTAAATCAAATCATATATTGTTTGGCTGAGGACTCAATGGAAGAA
GACCAACCTTACCAATACTTCAAATGGAATCTGATATCCTATCAAAGCCT
ATCACAGCTTGTTTCCTTACTGGTGAACATATTCAGTAAATTTCCAAGCT
CTTTTTACAGCCGTATTGCAGAAAATGATTTACCGAGTTTAATGTTCGTT
GTAAGTGCATTACTACAGATAAAAGATGACGAAAAAGTGAAATATTGTAG
TGGGAATGGTCTCACGGACAATATAGATAGAGTGGACACACTTACTGAAA
ATGTGATTAAAATTCTATGTCTTCCGTTTGCGTTGGATCTTGATCAAANG
AAAATGTGAATTCAAACAGACAAGTCTATGGACATTAATGTGAACCAATT
ATTCATCAAAGGTCAAGCAAAGTGGATATTGGATAGTGTAACCAGTGATT
TAAACCATCAACTGAATATTGAGCAAGCATGCCGAATGCTACAAATCATA
ATCACCGATGAAGCTGTATTAACTTACTTATTGAAACATGTTCCAAATAT
ATCCATTTTGCTGACTGCAAATCAAAGTCATGCGTCAAAAGAACAGCTAC
TTCGTTTGATATTGCTCATGCATTCTTCATTGAAAAAGACCACCACATTC
AA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036062XLOC_036062Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00057246-proteinTCONS_00057246-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00057246-exon-scaffold_286-1575043694:359768..360060TCONS_00057246-exon-scaffold_286-1575043694:359768..360060Clytia hemisphaericaexon
TCONS_00057246-exon-scaffold_286-1575043694:357910..358945TCONS_00057246-exon-scaffold_286-1575043694:357910..358945Clytia hemisphaericaexon
TCONS_00057246-exon-scaffold_286-1575043694:356848..356965TCONS_00057246-exon-scaffold_286-1575043694:356848..356965Clytia hemisphaericaexon
TCONS_00057246-exon-scaffold_286-1575043694:356355..356415TCONS_00057246-exon-scaffold_286-1575043694:356355..356415Clytia hemisphaericaexon
TCONS_00057246-exon-scaffold_286-1575043694:355095..355224TCONS_00057246-exon-scaffold_286-1575043694:355095..355224Clytia hemisphaericaexon
TCONS_00057246-exon-scaffold_286-1575043694:354258..354330TCONS_00057246-exon-scaffold_286-1575043694:354258..354330Clytia hemisphaericaexon
TCONS_00057246-exon-scaffold_286-1575043694:353597..353693TCONS_00057246-exon-scaffold_286-1575043694:353597..353693Clytia hemisphaericaexon
TCONS_00057246-exon-scaffold_286-1575043694:352967..353185TCONS_00057246-exon-scaffold_286-1575043694:352967..353185Clytia hemisphaericaexon
TCONS_00057246-exon-scaffold_286-1510915933:359768..360060TCONS_00057246-exon-scaffold_286-1510915933:359768..360060Clytia hemisphaericaexon
TCONS_00057246-exon-scaffold_286-1510915933:357910..358945TCONS_00057246-exon-scaffold_286-1510915933:357910..358945Clytia hemisphaericaexon
TCONS_00057246-exon-scaffold_286-1510915933:356848..356965TCONS_00057246-exon-scaffold_286-1510915933:356848..356965Clytia hemisphaericaexon
TCONS_00057246-exon-scaffold_286-1510915933:356355..356415TCONS_00057246-exon-scaffold_286-1510915933:356355..356415Clytia hemisphaericaexon
TCONS_00057246-exon-scaffold_286-1510915933:355095..355224TCONS_00057246-exon-scaffold_286-1510915933:355095..355224Clytia hemisphaericaexon
TCONS_00057246-exon-scaffold_286-1510915933:354258..354330TCONS_00057246-exon-scaffold_286-1510915933:354258..354330Clytia hemisphaericaexon
TCONS_00057246-exon-scaffold_286-1510915933:353597..353693TCONS_00057246-exon-scaffold_286-1510915933:353597..353693Clytia hemisphaericaexon
TCONS_00057246-exon-scaffold_286-1510915933:352967..353185TCONS_00057246-exon-scaffold_286-1510915933:352967..353185Clytia hemisphaericaexon
TCONS_00057246-exon-scaffold_286-1491911889:359768..360060TCONS_00057246-exon-scaffold_286-1491911889:359768..360060Clytia hemisphaericaexon
TCONS_00057246-exon-scaffold_286-1491911889:357910..358945TCONS_00057246-exon-scaffold_286-1491911889:357910..358945Clytia hemisphaericaexon
TCONS_00057246-exon-scaffold_286-1491911889:356848..356965TCONS_00057246-exon-scaffold_286-1491911889:356848..356965Clytia hemisphaericaexon
TCONS_00057246-exon-scaffold_286-1491911889:356355..356415TCONS_00057246-exon-scaffold_286-1491911889:356355..356415Clytia hemisphaericaexon
TCONS_00057246-exon-scaffold_286-1491911889:355095..355224TCONS_00057246-exon-scaffold_286-1491911889:355095..355224Clytia hemisphaericaexon
TCONS_00057246-exon-scaffold_286-1491911889:354258..354330TCONS_00057246-exon-scaffold_286-1491911889:354258..354330Clytia hemisphaericaexon
TCONS_00057246-exon-scaffold_286-1491911889:353597..353693TCONS_00057246-exon-scaffold_286-1491911889:353597..353693Clytia hemisphaericaexon
TCONS_00057246-exon-scaffold_286-1491911889:352967..353185TCONS_00057246-exon-scaffold_286-1491911889:352967..353185Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_286supercontigscaffold_286:352967..360060 -
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.54655	3.26035	2.50716	1.85312	10.312	7.60736	8.36048	9.0805	4.43318	5.57444	4.04704	2.69718	4.73216	3.06889	3.3444	4.63131	5.02795	6.22276	3.36699	3.93405	3.49971	2.67299	4.95373	4.46609	6.64409	6.25488	2.45482	1.99937	4.61257	4.65637
Blast
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BLAST of TCONS_00057246 vs. Swiss-Prot (Human)
Match: STK36 (Serine/threonine-protein kinase 36 OS=Homo sapiens GN=STK36 PE=1 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 2.434e-17
Identity = 83/307 (27.04%), Postives = 139/307 (45.28%), Query Frame = 3 
Query:  945 NVIKILCLPFALDLDQCLLYEILCSLYQSSTIGSLFFLLSK--PSMIDNQEETSIVVGLIARLVLTDEMFISQLKSLLNGPENFDMLFKDLLFSSSDNAIRCDVLAVMSHLAR--QSADTSRVVSRIFEQENGFSRLFLLLHDEDSRLVVRAAMVIANTLKHSSDLYGDIVRMKVHPTLFELLQS-QDAAIRKAISLIIGNLAYHNDELYHILSSCISILVHLLNDNIPKIRSNAAVALGNLVRHSPILFPTLIENKVPVRLLDCACSDEDTQVQEHALWALRLYFRNTQCKKILINAGLQDKLDFF 1850
            +V ++LC PFALD+D  LL  +L  L  S     L  +     P M     +  + + L+ RL L D   ++Q  + ++      + F  +   S    +  D+L++++H AR    +  S +   +   +  +  L  LL   ++ +      ++ + L+HS  L G +       +L  L    +D  +R + S  +GN AY    L   L++ +  +  LL D    IR N A ALGNL      L   L++ +VP RLL+ AC D    V+E AL ALR   +     ++L++ G  +KL   
Sbjct:  983 SVCQLLCFPFALDMDADLLIGVLADLRDSEVAAHLLQVCCYHLPLM-----QVELPISLLTRLALMDPTSLNQFVNTVSASPRTIVSFLSVALLSDQPLLTSDLLSLLAHTARVLSPSHLSFIQELLAGSDESYRPLRSLLGHPENSVRAHTYRLLGHLLQHSMALRGALQSQSGLLSLLLLGLGDKDPVVRCSASFAVGNAAYQAGPLGPALAAAVPSMTQLLGDPQAGIRRNVASALGNLGPEG--LGEELLQCEVPQRLLEMACGDPQPNVKEAALIALRSLQQEPGIHQVLVSLGASEKLSLL 1282
The following BLAST results are available for this feature:
BLAST of TCONS_00057246 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
STK362.434e-1727.04Serine/threonine-protein kinase 36 OS=Homo sapiens... [more]
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