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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00057321 ID=TCONS_00057321|Name=TCONS_00057321|organism=Clytia hemisphaerica|type=transcript|length=994bp
CAACTTCAAAATTATTGGTTAATTCTATataatgaacttttaaataATCA
ACAACGGTACACTAAAAAAATAAGTCTAGTTCTTTAAAATTCTTCCAAAA
CTTGTTTGTAAATATATGCGATTCATATATAAGACATTCACATAAAAACA
CTTTATTATAAATTTCCATTTGCAAAAATGGACGGTTAAGGTTCCGATGA
AATGTGTCGTCTACGATACGTCACCAACGCGAACATGAAGATGAAGAGGA
CAAAAATGACCAGAGTGACCACATTCAATACCATCAATGTTGTTACGTCA
TCTTTTAAAGAGTTCTCAATATCATCTCTCTGCCCCTCGTTCTCCCCTCT
GCCAGGTGTTAAAGTGGTTGTGGGTGCGCCGCCAGAAGTTGTAGAGTTGT
TGTCTCCTTGGTAATCGTCAGTTCGTGTTGGATGATAATTATCCGTAGTA
TGGTTCGAAAGTGTTTCAGTGTTATATGTACGATCGTGTTCTTCAGTAGT
AACAAGGAAAGGTCGTCCGGTTGTATCGTGTTCCCTTTTTTCACACAATG
TACCGGTATATGTAAAAAAACATGAACATCTCGCTCCATTTTTATCTTGC
ACACATTTACCAAAATTCCGACACGGGTCTTGCGAACAAACATCACACCC
AATCTTTCCGCCAATGATAAACATAGAAGCTCGATCGCTCAACTTTTGGA
GGTCGTTTGTAGCATTAGAGCGACAATCGCCGATAACGGTAGCTTCTCTC
GTGACTTGTTTGATTGCAGATAAAACGTTACAACTGCACCGAAAATCATT
ATTTGATAAATCCAACACACCGCTTATTTTCTCAGTATTATATCTCAAGA
AATTTTTCGGTAAGTCTGTAAGTTTGGTATTTCGTAAGTTCAGATTACGA
AATTTGTTGAATCCGTTGAACGAGTTTTCGGTTACTTCCTTAAGCGAGTT
TCCCGATAAATCAATAGTTACCAAATCTATCAAGCTCGGGAAAA Run BLAST on NCBI transcript from alignment at scaffold_288:185983..186976+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00057321 ID=TCONS_00057321|Name=TCONS_00057321|organism=Clytia hemisphaerica|type=transcript|length=994bp|location=Sequence derived from alignment at scaffold_288:185983..186976+ (Clytia hemisphaerica)
CAACTTCAAAATTATTGGTTAATTCTATataatgaacttttaaataATCA
ACAACGGTACACTAAAAAAATAAGTCTAGTTCTTTAAAATTCTTCCAAAA
CTTGTTTGTAAATATATGCGATTCATATATAAGACATTCACATAAAAACA
CTTTATTATAAATTTCCATTTGCAAAAATGGACGGTTAAGGTTCCGATGA
AATGTGTCGTCTACGATACGTCACCAACGCGAACATGAAGATGAAGAGGA
CAAAAATGACCAGAGTGACCACATTCAATACCATCAATGTTGTTACGTCA
TCTTTTAAAGAGTTCTCAATATCATCTCTCTGCCCCTCGTTCTCCCCTCT
GCCAGGTGTTAAAGTGGTTGTGGGTGCGCCGCCAGAAGTTGTAGAGTTGT
TGTCTCCTTGGTAATCGTCAGTTCGTGTTGGATGATAATTATCCGTAGTA
TGGTTCGAAAGTGTTTCAGTGTTATATGTACGATCGTGTTCTTCAGTAGT
AACAAGGAAAGGTCGTCCGGTTGTATCGTGTTCCCTTTTTTCACACAATG
TACCGGTATATGTAAAAAAACATGAACATCTCGCTCCATTTTTATCTTGC
ACACATTTACCAAAATTCCGACACGGGTCTTGCGAACAAACATCACACCC
AATCTTTCCGCCAATGATAAACATAGAAGCTCGATCGCTCAACTTTTGGA
GGTCGTTTGTAGCATTAGAGCGACAATCGCCGATAACGGTAGCTTCTCTC
GTGACTTGTTTGATTGCAGATAAAACGTTACAACTGCACCGAAAATCATT
ATTTGATAAATCCAACACACCGCTTATTTTCTCAGTATTATATCTCAAGA
AATTTTTCGGTAAGTCTGTAAGTTTGGTATTTCGTAAGTTCAGATTACGA
AATTTGTTGAATCCGTTGAACGAGTTTTCGGTTACTTCCTTAAGCGAGTT
TCCCGATAAATCAATAGTTACCAAATCTATCAAGCTCGGGAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00057321-exon-scaffold_288-1491911889:185983..186976 | TCONS_00057321-exon-scaffold_288-1491911889:185983..186976 | Clytia hemisphaerica | exon |
| TCONS_00057321-exon-scaffold_288-1510915933:185983..186976 | TCONS_00057321-exon-scaffold_288-1510915933:185983..186976 | Clytia hemisphaerica | exon |
| TCONS_00057321-exon-scaffold_288-1575043694:185983..186976 | TCONS_00057321-exon-scaffold_288-1575043694:185983..186976 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_288 | supercontig | scaffold_288:185983..186976 + |
Blast
The following BLAST results are available for this feature:
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