Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00057445 ID=TCONS_00057445|Name=TCONS_00057445|organism=Clytia hemisphaerica|type=transcript|length=690bp ACAGAAATGAAGAACGaagtcttcaaaaatgttgaagaCCAATGCAGTTG TGCCATTTGTTTGGAGTTAGCAGATGAAGCCGTGGAGTGTAGCCATTGTC ATCAAGTGTTTTGCCAGAAATGTATCGTTGGGTTGGAAGGTTGCCCGAGT TGCCGTCAAACTCCGTTTACAACACAGCCCAATGTGATTCTAAGAAGAAT ATTCGGTAGTATGATAACAAATTGCACGAATGAGGGGTGTAAAGAACGAC CAACTCGCTCAAATCTAACATCGCATTTGGAAAAATGTGAATGGTCTACA ATTGAATGTCCAAACGATGGATGCGATCAAAAGTATCAGAAATTTGCTTC AGAGCAACACAAAAGGCAATGCGTGTATCGTTTGGAGGCTTGCATCGGAT GTGGTCATCAATACAAGATGCTGGATCTGGCAAATCACCAGGATCAATGC TTATTTGTCGACGTTCCTTGCATGAATTCCAATTGTAATGAGCGTTTCTT ACGGAAAGATGAGAGCTCTCATATCAGTGTTTGCAAACAGCAGATGATAC GATGTTCGTTCTGTTTCTTTTCCGATACCAGGATCCAAGTATTGCATCAT ACAATCGACATCCATTACCAAGAAGCTGTTGGCCCGATGTCCTCTTTGGC TCCCAGGTCGTTTGGTGCAAGTAGTCATCAACCGTGATAC Run BLAST on NCBI protein sequence of TCONS_00057445-protein >TCONS_00057445-protein ID=TCONS_00057445-protein|Name=TCONS_00057445-protein|organism=Clytia hemisphaerica|type=polypeptide|length=228bp
TEMKNEVFKNVEDQCSCAICLELADEAVECSHCHQVFCQKCIVGLEGCPS CRQTPFTTQPNVILRRIFGSMITNCTNEGCKERPTRSNLTSHLEKCEWST IECPNDGCDQKYQKFASEQHKRQCVYRLEACIGCGHQYKMLDLANHQDQC LFVDVPCMNSNCNERFLRKDESSHISVCKQQMIRCSFCFFSDTRIQVLHH TIDIHYQEAVGPMSSLAPRSFGASSHQP Run BLAST on NCBI transcript from alignment at scaffold_288:767193..767882 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00057445 ID=TCONS_00057445|Name=TCONS_00057445|organism=Clytia hemisphaerica|type=transcript|length=690bp|location=Sequence derived from alignment at scaffold_288:767193..767882 (Clytia hemisphaerica) GTATCACGGTTGATGACTACTTGCACCAAACGACCTGGGAGCCAAAGAGG
ACATCGGGCCAACAGCTTCTTGGTAATGGATGTCGATTGTATGATGCAAT
ACTTGGATCCTGGTATCGGAAAAGAAACAGAACGAACATCGTATCATCTG
CTGTTTGCAAACACTGATATGAGAGCTCTCATCTTTCCGTAAGAAACGCT
CATTACAATTGGAATTCATGCAAGGAACGTCGACAAATAAGCATTGATCC
TGGTGATTTGCCAGATCCAGCATCTTGTATTGATGACCACATCCGATGCA
AGCCTCCAAACGATACACGCATTGCCTTTTGTGTTGCTCTGAAGCAAATT
TCTGATACTTTTGATCGCATCCATCGTTTGGACATTCAATTGTAGACCAT
TCACATTTTTCCAAATGCGATGTTAGATTTGAGCGAGTTGGTCGTTCTTT
ACACCCCTCATTCGTGCAATTTGTTATCATACTACCGAATATTCTTCTTA
GAATCACATTGGGCTGTGTTGTAAACGGAGTTTGACGGCAACTCGGGCAA
CCTTCCAACCCAACGATACATTTCTGGCAAAACACTTGATGACAATGGCT
ACACTCCACGGCTTCATCTGCTAACTCCAAACAAATGGCACAACTGCATT
GGtcttcaacatttttgaagacttCGTTCTTCATTTCTGT Coding sequence (CDS) from alignment at scaffold_288:767193..767882 >TCONS_00057445 ID=TCONS_00057445|Name=TCONS_00057445|organism=Clytia hemisphaerica|type=CDS|length=687bp|location=Sequence derived from alignment at scaffold_288:767193..767882 (Clytia hemisphaerica) TCACGGTTGATGACTACTTGCACCAAACGACCTGGGAGCCAAAGAGGACA TCGGGCCAACAGCTTCTTGGTAATGGATGTCGATTGTATGATGCAATACT TGGATCCTGGTATCGGAAAAGAAACAGAACGAACATCGTATCATCTGCTG TTTGCAAACACTGATATGAGAGCTCTCATCTTTCCGTAAGAAACGCTCAT TACAATTGGAATTCATGCAAGGAACGTCGACAAATAAGCATTGATCCTGG TGATTTGCCAGATCCAGCATCTTGTATTGATGACCACATCCGATGCAAGC CTCCAAACGATACACGCATTGCCTTTTGTGTTGCTCTGAAGCAAATTTCT GATACTTTTGATCGCATCCATCGTTTGGACATTCAATTGTAGACCATTCA CATTTTTCCAAATGCGATGTTAGATTTGAGCGAGTTGGTCGTTCTTTACA CCCCTCATTCGTGCAATTTGTTATCATACTACCGAATATTCTTCTTAGAA TCACATTGGGCTGTGTTGTAAACGGAGTTTGACGGCAACTCGGGCAACCT TCCAACCCAACGATACATTTCTGGCAAAACACTTGATGACAATGGCTACA CTCCACGGCTTCATCTGCTAACTCCAAACAAATGGCACAACTGCATTGGt cttcaacatttttgaagacttCGTTCTTCATTTCTGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00057445-exon-scaffold_288-1491911889:767193..767882 | TCONS_00057445-exon-scaffold_288-1491911889:767193..767882 | Clytia hemisphaerica | exon |
TCONS_00057445-exon-scaffold_288-1510915933:767193..767882 | TCONS_00057445-exon-scaffold_288-1510915933:767193..767882 | Clytia hemisphaerica | exon |
TCONS_00057445-exon-scaffold_288-1575043694:767193..767882 | TCONS_00057445-exon-scaffold_288-1575043694:767193..767882 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_288 | supercontig | scaffold_288:767193..767882 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
Term | Definition |
GO:0008270 | zinc ion binding |
GO:0005515 | protein binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category |
Term Accession |
Term Name |
molecular_function |
GO:0005515 |
protein binding |
molecular_function |
GO:0008270 |
zinc ion binding |
Blast
The following BLAST results are available for this feature:
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