Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00057651 ID=TCONS_00057651|Name=TCONS_00057651|organism=Clytia hemisphaerica|type=transcript|length=954bp CTTTACCAAACCTTGtgtcaaatgaaaaataaaaggaGATAGTGTTCATC TTTACCAATTCCAAATTACGTCATATTTCTAAAGCCTTATGAATGGGCGC TTGACAAAAAAAGACATTTGCCATTGTTGAACTTTGGTCATCCCTAAGCC AATTTTCTCATGGTATCAGGATTGTTATAACAAGTGTGTAATATTACTTt cgtactttttattttttaggagATTACAGTATTCACACAATCAAGGCAGA TGGGGACTGTGGTTTCACGTACAGTAGTGTCAATCACTGTTGTCACTTCA TCATTCTTAATTCCAAAACCTGAGCCTTACAAACCAGAAACAGCAGGTGA GCTGAAGGCTTACGATCCACCCAGATATAAACTCATCAAAGGTCCAGACA ATTCTATGGCTACAAATGTAATCCCACCAAATTATCAAGAAGGCTGGCAA CAATCTCTAGTCAATAGAGACCTCCCAGAAGTAACTGAAATACAAATATT AGAAGAAATCGATTAATCAAGCCAAACTGAATGAGTATCACATTGGATCT AAAACTTCAAGCTAGCGCTTTTGGACCAAATGCTTTCGAAGTTTCCAGAA AGTTAAGTTTAAATCAGCCATTCCATAAAGTAATAAGAAAagacaaaaag ttttattttattttcagcaaaagcttttcggtaAAACCATCTTCAGTGCT AGATGTTTAGAAAGAAGGTATTCAGATTCGGAAAGTATTCGATTCGGAAA TGGCTTTTATAACATCTTTTATATAATTATACATAAGGACACAcaacaat ataaaaaaaataaaaataaaatacaaacaggAAGAGATAGAGAGAAGAAT TGTACAGATCTTATAAATTTTATACCATCTGAGAATTTTGTATACGAAAT CTTTATGAAAAGAAGTATTATGTAAAATTTGtagcttttgtaaaaaatta tttc Run BLAST on NCBI transcript from alignment at scaffold_297:81304..82516+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00057651 ID=TCONS_00057651|Name=TCONS_00057651|organism=Clytia hemisphaerica|type=transcript|length=1213bp|location=Sequence derived from alignment at scaffold_297:81304..82516+ (Clytia hemisphaerica) CTTTACCAAACCTTGtgtcaaatgaaaaataaaaggaGATAGTGTTCATC
TTTACCAATTCCAAATTACGTCATATTTCTAAAGCCTTATGAATGGGCGC
TTGACAAAAAAAGACATTTGCCATTGTTGAACTTTGGTCATCCCTAAGCC
AATTTTCTCATGGTATCAGGATTGTTATAACAAGTGTGTAATATTACTTt
cgtactttttattttttaggagATTACAGTATTCACACAATCAAGGCAGA
TGGGGACTGTGGTTTCACGTACAGTAGTGTCAATCACTGTTGTCACTTCA
TCATTCTTAATTCCAAAACCTGAGCCTTACAAACCAGAAACAGCAGGTAC
CTCTTCAAATTGTATTTCCTAATAAATTTTTTCTAACCCTTATATAAATT
GGGtctatgaaaaaaatgaatgtgaaaaatggatttttagttaaaaagtt
gatttttttcaaatagtaCATTTTCCTCGACAGCTCCTTTGACTTTAACA
GCTAAAAAACAATCCCACCTTTCTGTAGATCAGAagagatttaaaaaata
atttgatgattTAATGTGAAGTATGAAGAAgttcttttgtattttcataA
TATAGGTGAGCTGAAGGCTTACGATCCACCCAGATATAAACTCATCAAAG
GTCCAGACAATTCTATGGCTACAAATGTAATCCCACCAAATTATCAAGAA
GGCTGGCAACAATCTCTAGTCAATAGAGACCTCCCAGAAGTAACTGAAAT
ACAAATATTAGAAGAAATCGATTAATCAAGCCAAACTGAATGAGTATCAC
ATTGGATCTAAAACTTCAAGCTAGCGCTTTTGGACCAAATGCTTTCGAAG
TTTCCAGAAAGTTAAGTTTAAATCAGCCATTCCATAAAGTAATAAGAAAa
gacaaaaagttttattttattttcagcaaaagcttttcggtaAAACCATC
TTCAGTGCTAGATGTTTAGAAAGAAGGTATTCAGATTCGGAAAGTATTCG
ATTCGGAAATGGCTTTTATAACATCTTTTATATAATTATACATAAGGACA
CAcaacaatataaaaaaaataaaaataaaatacaaacaggAAGAGATAGA
GAGAAGAATTGTACAGATCTTATAAATTTTATACCATCTGAGAATTTTGT
ATACGAAATCTTTATGAAAAGAAGTATTATGTAAAATTTGtagcttttgt
aaaaaattatttc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00057651-exon-scaffold_297-1491911889:81304..81649 | TCONS_00057651-exon-scaffold_297-1491911889:81304..81649 | Clytia hemisphaerica | exon |
TCONS_00057651-exon-scaffold_297-1510915933:81304..81649 | TCONS_00057651-exon-scaffold_297-1510915933:81304..81649 | Clytia hemisphaerica | exon |
TCONS_00057651-exon-scaffold_297-1575043694:81304..81649 | TCONS_00057651-exon-scaffold_297-1575043694:81304..81649 | Clytia hemisphaerica | exon |
TCONS_00057651-exon-scaffold_297-1491911889:81909..82516 | TCONS_00057651-exon-scaffold_297-1491911889:81909..82516 | Clytia hemisphaerica | exon |
TCONS_00057651-exon-scaffold_297-1510915933:81909..82516 | TCONS_00057651-exon-scaffold_297-1510915933:81909..82516 | Clytia hemisphaerica | exon |
TCONS_00057651-exon-scaffold_297-1575043694:81909..82516 | TCONS_00057651-exon-scaffold_297-1575043694:81909..82516 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_297 | supercontig | scaffold_297:81304..82516 + |
Blast
The following BLAST results are available for this feature:
|