|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00057682 ID=TCONS_00057682|Name=TCONS_00057682|organism=Clytia hemisphaerica|type=transcript|length=3558bp
GCATTattggtttttgttttgattggaaagGACTAGCCACTGATGGTCTC
TGAGTATACTGTCACTGAATAAACCATTGTCATCATAAACCTCAGAAAGA
TTAGATTCAGCAAAGGGGTTTTCATCGCCAGGTTTTCGAGCTACTAATGA
TTCCCCTGGTTTCGCAAAAGAATGATTTGAGTACCTCATTTAACTAGCTC
TCTTTAAGTAACTCTTCATACCTATCTTAacgtattttttatattttggc
cCTTTGAAGATTAAATTAGAGAGGAAAAACTGTACCCAACGTTCAATGAT
CAGTTCTTAGAAATGTTAAAGAAGAAAACCAGCTGGTCACTAACAGCTCT
GGTGATCCTCAATATCCTTTGTGGACATCTGAAAGCCAAAAGACAATGTG
GAAATATCACTTGTATCTCACTCAATGGATTTTGCATTGGTAATTCTAAA
TGTGAATGTAACTATGGCTGGTTTGGGCCAACGTGTGAGAAGCCTTGCCA
GTGTAATGGTTTGTCTCCTTGTGACAAAGATTCTGGTAAATGTTTGCAAT
GTGTCAATCATTCTGAGggtgaaaattgtcAACGATGCAAACCTGGTTAT
ATAGGAAGTCCACAACACAACCAACAATGTATATCATGTCAAGAATTTTG
TCATGGAAAATCAAACATCTGTGTCACTTCAAATTCTTACAACTTTTGGA
AAGGCATTATTGAAAACGATAATCTGAGACCCTATCAAGTTATAAAATTG
CTCTCAGATTCTATGATGGCTTCAATTCCCAGTGAAGCGAGCTGTTTGTA
CTGCAAAGATGGAAGATACGGTCATCGTTGTCAACTTTCTTGTGGTAAAG
GTTACTATAGAACAAAAGACAAAGGTTGTAAAAGGTGTAGCTGTAACGAG
CATGCCACTCAGTGTGACCAAGGGACTGGTCAAGGTTGTCGTTGTCTTCA
TAACACACTCACTAAAGGCACTTACCAATGCCTCGACCATCGAACTTGTC
TTCTACTGCAGTGTTCGTATTGTCGTAACGGTTACATCGGGTCCCCTACA
AACGGTAAACAATGCTACAAAAAAACCAATGAGAATTTCCTCTACGAAGA
CAATCTTCATCTGGGAAATATAAAATCGTATGTTTTAAGCTACGATCAAG
ATCAAGGGATACGACTCAATGTTGATGTCATAGAAGGCGCTGTTGATATT
TATCTCACCGATAACAAACATGTTTTCAGAGCAACGTTAAATGAAAATGG
TACACAAAACCTGTTTTACAACGACAATGAAAAGCCGACTCCCGAGTATA
CAACCGATGAAGATATATCGGCGGTTTTACTCGGTAACCAACTAATCACT
TTCAAGAGATACCAGAAAGGAGTTTTAGCTATGAAGAATATGCAACACCG
CGCCATAATTACTATAGACCCACAAGATGAACATCTTCGGAGAGTTCAGT
TTTACGTAGTGATTAAGAAGAGCGACGATTCAAGACCCATAGCAAAAACA
ACATTGTATTATGATCAGGGAATACTGGCCCTAGACATGAAGCTACTCTT
TGTTGGCCTCCTAATGAGCGCTTTAACGCTGGTTGTTGAGCTAACTTTAG
TGTTCCGATTAAGGAGCGAGTATATGAATAACCTGAACAACGAACTGAAT
AATACACATCTAAAGGAGCTTGAAAATAGACCTATGCTTCAATACATATT
TGATGCACCACCGTTGAGTTTTCAGCACGAGAGAAGAGACTTAAGAGTAT
TACCAGTAGCGGTACAACAAACAGCATTTGATGACGATGTTGCATTTTTT
TCAGTACTGGTTCAACTACCAGGTTATCAAAACTCGAAATGTGATATCAC
TTTTGGTACTGGgattttccttttgaaaagtGAGACTAAAGATTCGAAAA
GAATTGAAACTATTAAACGAACCACGACAGAAGAGTACGATCTAGAACAT
ATTAATTACGGGCACAATATAGcatgatttattttttctggCGCTTTATA
ATACAGATATTAGaccattaaaatttttcttaccatttttcttttccctc
tttctgaccatcttgctccacatccgtgtcaatccaatgttaaaaagctt
ATGAATTCAAATTGATGATTAAGCAAACGATACTAGtcttattcataaaa
aaaaccttttaattttggacatatttatATTTACCACATTATCATTTTCG
GAAACttttaataaataatataaaatcttCGCGTAtcaaaaactttgtaa
acaGAATAAAAATGAACACCATAACATTTAAAACGactcaatttaaaaat
atgtaggGAATATTGGTTTTTACCAAGGCGTTATCTCCCAACATTTCCAT
TTAATCTCTAGCGAGTCAACTTCATTTCGAAGGTATTTCATCAACTATCA
AGAATAGCAATTTCTTCAATAATCAACCAGTTTGGAATTCCTTTCGTTTT
CTGGACAGCTGTCAACTCCAGTTTGACACACCGAACGTTTTCTTTAGGTT
CATCAAAAGTAATATCAACTATTGCTTCTTTGTAAAATTTCACCAGCTCA
AACTTCCCACATTTCGAATTCGTGTTACCTTTCATTTGAGAGATGTATAA
TTTAGTTTCATAGAAGCTGTCTTTTTCATGTCCATCCATTCCGCTAGAGA
TAAAGATCCTCTTGATTTTCTGTGGAGAATTAAACATTATCGTCAGTGTG
TCACCATCCTTAGGTTTTGTTGCCCACATTACACCTTTGCTCGAGTATGG
GTTCTCTAACACATTGCTTTTATAGAATCCCGATAAATCCGATTCTATTT
CGGCAACGGGATTTCCTTTTACCGATTGGAATTGTCGTCGACCAACTATC
GGGATATCCTTTAAATCCTCGAGTTTTCTCACTTGACCATTCAAGGAAGA
GAATTTACCGACATGCAAGAAAACAGGTTTCTTTATGCGAAAattctttg
gatttttataCAAGTAGATATCATTATAAACTCGAAAAAGTAAATCAACT
GGCATGGTCCAAAAGAAATATCTGACAAATTTTGCCAACGATTCTAAATG
CTCTCCCCGATAAGTCATTCCGATAAATCCTCGGGCACCAAGCTCAAGAA
CCGACCAACGAAGTTTGTCGTTTTTCGTTATGAATTGTCGCATTTTCTGC
ATAAAATCATCAACAGCAATTATATCATCTTCAAGCTGAACAAAATATTG
CGCCATATCTTTACAGTAATAATATAAGtatgaataatcgagacattgCT
TCGATCTCCAGCGGACTCGATCTTGTTTATCGCCAAACAGTCTTGGCAAA
TTATCCAGATTCTTAGGATAGTAGGCTTTATCAGGAGCAACCACTTGAAT
GATACCGTCTTTAACTTCGACTGGAAAGTTCTCTCGAACATCTTTTACGA
CTTTCCTAAGAAAACCTTCGTCAAGATCTGCCACAAAAATGACGATGACA
ACATTTTTCCTTTCTGAAGTTTTCATGTGTTTGAGCAAAGAGGATACCGT
TTGGATGACATAATAAGCTTTACTTCTCTTGACGGTTGGAATCCCAAAAA
CAACGAAA Run BLAST on NCBI transcript from alignment at scaffold_297:112903..120282- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00057682 ID=TCONS_00057682|Name=TCONS_00057682|organism=Clytia hemisphaerica|type=transcript|length=7380bp|location=Sequence derived from alignment at scaffold_297:112903..120282- (Clytia hemisphaerica)
GCATTATTGGTTTTTGTTTTGATTGGAAAGGACTAGCCACTGATGGTCTC
TGAGTATACTGTCACTGAATAAACCATTGTCATCATAAACCTCAGAAAGA
TTAGATTCAGCAAAGGGGTTTTCATCGCCAGGTTTTCGAGCTACTAATGA
TTCCCCTGGTTTCGCAAAAGAATGATTTGAGTACCTCATTTAACTAGCTC
TCTTTAAGTAACTCTTCATACCTATCTTAACGTATTTTTTATATTTTGGC
CCTTTGAAGATTAAATTAGAGAGGAAAAACTGTACCCAACGTTCAATGAT
CAGTTCTTAGAAATGTTAAAGAAGAAAACCAGCTGGTCACTAACAGCTCT
GGTGATCCTCAATATCCTTTGTGGACATCTGAAAGCCAAAAGACAATGTG
GAAATATCACTTGTATCTCACTCAATGGATTTTGCATTGGTAATTCTAAA
TGTGAATGTAACTATGGCTGGTTTGGGCCAACGTGTGAGAAGCCTTGCCA
GTGTAATGGTTTGTCTCCTTGTGACAAAGATTCTGGTAAATGTTTGCAAT
GTGTCAATCATTCTGAGGTAAATAATATCTCAATGATGCTTCACAAGGAA
TTCATGATATGCACCATTGGAGAGTCTTCTGAGAACTTTTAAAATTTTCC
ACCCAATACGTCACTTAAAAAAAAGAATGACGTATTGGGTGGAATTTTTG
GAAGATTCTTGGAAGACTCTTCAGTGGTGCATATCTTGAATATCCAGTAA
GCTGGAGCTTTTTAGACAGTCTTTTGATTTGTTAGACAGCACTCCTTTCC
AACCAACATTAGATTATCTGCCTGTCCCATTGAATATCAATATTTGTTGA
AAAGGTACGAAAGCGTAACGACGGCAAATATTTTCGATAACTCTCTTCCT
TTATGCTAAAAACTGATGCATTTGGGGTGAAAATAGCTGATCAGAGGCGC
ATTTTTGGTGGTGTTTGCCTTTAAAAAAAAAGTCGTTTGGGATTGGGGTA
GTTGTTGCCCCTCTCTACCTTCCCTGTCAATGACTGAATCAACAACCTTG
CGCAAAAAATATTATAAATTCTGTCAACCTTTCTTATATTCAGGGTGAAA
ATTGTCAACGATGCAAACCTGGTTATATAGGAAGTCCACAACACAACCAA
CAATGTATATCATGTCAAGAATTTTGTCATGGAAAATCAAACATCTGTGT
CACTTCAAATTCTTACAACTTTTGGAAAGGCATTATTGAAAACGATAATC
TGAGACCCTATCAAGTTATAAAATTGGTAAGTATATTATTTTTAGATACC
CCTGTTTCACGGATTGCTCTCACTGGAAAATTTGTGGAAAATCATTCAGC
GAAAAAGATTTTACCCAGCACATAAGCCAAGTCACAATAAGTCACTTGGT
GCTTGAATTCATTCGCAATAAATGCCCACTAATTTAGAAACTACTCTCAT
GCTGATATTTTCTCTACATGGTAATGCAAAAAGTCCACAATCAAAACGAA
TGAGCTTTGGTTATGAGCTTCAATTAAACATAAGAGATGGACCGCTTATG
AAATCTTATCAGGAATTCAAATAATGTCAAAAGTCCAGTTAGTTGCTGCT
TAAAATCTCTTTGTCTCGGAAAGTATACAAAGTATGCGAGAGTATGCGAT
ATTATGTTTGGATACTCTACATGTATACGAATTACCCTCTTTTTTTCCTT
ACCATAGCTCTCAGATGCTATGGCCTTGAATCCTTCCATTCCCAATGAAG
CGAGCTGTTTGTACTGCAAAGATGGAAGATACGGTCATCGCTGTCAACTT
TCTTGTGGTAAAGGTTACTATAGAACAAAAGACAAAGGTTGTAAAAGGTT
AGTAATTGTAGCTGAAACTTAAGGGCGTACAGTGAAATCTTCATAACTCA
AACATCTATTACTCAAATGTCTCCTTAACTCGAACAAGTTTGTTGGTCCC
TTCAATAAACAATGCCTTATAAACTAGTCTCCATAACTCGAAATGTCNGC
CCTTACGGGCGAAAAGTTTTGAAAAAGTGCACTGTAAGGGTATCATTTTT
CATGGAAATTCACTGCACTGTAAGGGTCAGATTTTAGAAGCCAAATTTTG
GGCCGAACGTATGGTCGTTTTCAGATCAAGTGCCCCCCCCCCGGGCTGAA
GTTCATTCGTAATGTAGAAACCACTCTCATGCTGATATAAAGTCCACGAT
CAAAACGAATGAACTTGGATATAAGCTTCAATTAGAAATCCTTCACATGT
ATACAAATGGAATTTTCTTTCTTTCCATAAAGCTCTCAGATTCTATGATG
GCTTCAATTCCCAGTGAAGCGAGCTGTTTGTACTGCAAAGATGGAAGATA
CGGTCATCGTTGTCAACTTTCTTGTGGTAAAGGTTACTATAGAACAAAAG
ACAAAGGTTGTAAAAGGTTAGTAATTGTAGCTGAAACTTAAGGGCGTACA
ATAAAATCTTCATAACTCAAACATCTATTACTCAAATGTCTCCTTAACTC
GAACAAGTTTGTTGGTCCCTTCAATAAACAATGCCTTATAAACTAGTCTC
CATAACTCGAAATGTCCAAAACTCGAACAAGTTTGCGTTGGGTGTTCGAG
TTATGGGGACTCTACTGTATAATCTTTTCCGATATTTGCGCATTTTTCAT
AAAAAGTAAGTTTTGTGCGTTCCGATGATTAGATACAACACCACATTGCT
TCTTCATAGAGATTCAGTTTTTGTAAGTTTATAAACAGAGGATATCTGCT
CATGAAAATTATATTTTCCTTCAAATCTTGTGCACTTTCTATCGGAAGCC
TCCAGTTTCTTGATGTTTTACCGTACGAGCCAGATAAAACAGTGCCAATC
AGTAAAAGTAATAAAGCCTTGGTTAGGCTGCTGGCATCCACTAACGGATT
GGTGCTCCTTATATATACTACTTTCAGTTTTGTAGAGGTCTGTAATTCAG
ACTAAGCATCGGTTAAATACACGAGAACGCCCGGGGGGTACTACCCTTGT
CGACCGACGGGGGTGCTCCGCTGAGGTTCGAAAAATGGACCCTACGTGGG
ACTCAAAATTTACGAAAAAAGTGACCCTGAATGGGACTGAAATTCCAAAA
TGTTCTCAAATTTTCTACTTTTTCCCCAAATTTTCCAAAAATAGGCACCC
TACGAGGGACTGATTTTTTTATTTTGGCCGTTTTTGCGACCCTACCTGGG
ACTCGTGGAGGTTAAAAAAGGTACCCTAACCAGCGGAGCATCCCCGTAAC
CCATCTTGCCCTAGTACCCCCCCCCCCCGCGCCCCCNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNCCCCCCCCCCCCCCGGGCGAGGACGAGTGGGTTTTT
CAGATAACCGTAAGAAAATTTTCATCTTAGGTGTAGCTGTAACGAGCATG
CCACTCAGTGTGACCAAGGGACTGGTCAAGGTTGTCGTTGTCTTCATAAC
ACACTCACTAAAGGCACTTACCAATGCCTCGACCATCGAACTTGTCTTCT
ACTGCAGGTTAGTAACTCCGCTTTATATACCTTATAACACACATATTACT
AGGTAAGTATTCAACGGCCTTGAAATCTGCACAAATTTTTCTGCTTTTTC
AAGGAAACAATGGCTGATTTAAATTAAGGGGGTTTTTATTCACACGAAAT
TTTTCAATTCGTGTAATTAAAATGACTAGTAATATTTGTGTAATAAGGTA
ATACACATAATCTTATACAAAACATTAGATAGGGCTACTCCATCCTTCCC
AAGCCAAGAGATTTGAAGTAAATTATTGCGCCATATTTACAAAAAATAGA
CCACCAGTCGGCGCCGGCAATCTGTTAATCAAAACGAACAACTACTACCA
TGGCGCGAAGTGAGAAGGGGAGGGAATAGTCTTGATTCATCAAATTTCTA
GCAACAAAATTTGATTTAATTTTAAAGATAATTTAATGCACTATTTAGCA
TAATAGAATAAGATTTTAGCTACTCTCGGGTACCTAATAGCCGGGGGGGG
GGGTTGGAAAAAAAATGTCCTGGGGGGAAAAATTTTGAAAAGGAGGCTAA
TACAGCTGAATTGGGACAAAAGAGGCAACTTTCAAAAACATTTTCTCAAA
AATTAATAAGCGGGGGGGGGGGGGGGATTGGAATAAGCGGGGGTTGGAAA
AAAAATGTCCTGGGGGGAAAAATTTTGAAAAGGAGGCTAATACAGCTGAA
TTGGGACAAAAGAGGCAACTTTCAAAAACATTTTCTCAAAAATTAATAAG
CGGGGGGGGGGGGGGGATTGGAATAAGCGGGGGTTGGAAAAAAAATGTCC
TGGGGGGAAAATTAATTAGCGGGGGGGGGGAGGGCTATTAGTTACCCGAG
AGTAATACTAACGAGTCTTTTCGAGCTGTAAAGAATACCTTAAGTGGATA
AATTTTGGCGGGGATTACATTTGGCGAATTTGACGAATTTTGCCGAAATT
CGCCAAATTAAATCCCCGCCAAATTTAACAAAAAGAGAATTATGAGAAAA
ATCACCAATTCCAATTTGCCAAATTAAATCCCCGCCAAATGTTACAAAAT
TGATTTATCGCCAAATTAAATCCCCGCTAAAAATTGTATTTTGGCCAATT
GCCAAATTAAGTCCACGCCAAAATTTATCCACTTTAGTTGAAACCTATAG
CTCTAAGCATAGCAATTTGAAAAATCTCACCCCTAATCTCATTGAACTTC
TTAATTTCAGTACAATAAGGCAAAAAAAAAAGTTTTACCTTACCACTTAT
TTTTAACTTGCTTAAACATCAATTTCTTTACAGTGTTCGTATTGTCGTAA
CGGTTACATCGGGTCCCCTACAAACGGTAAACAATGCTACAAAAAAACCA
ATGAGAATTTCCTCTACGAAGACAATCTTCATCTGGGAAATATAAAATCG
TATGTTTTAAGCTACGATCAAGATCAAGGGATACGACTCAATGTTGATGT
CATAGAAGGCGCTGTTGATATTTATCTCACCGATAACAAACATGTTTTCA
GAGCAACGTTAAATGAAAATGGTACACAAAACCTGTTTTACAACGACAAT
GAAAAGCCGACTCCCGAGTATACAACCGATGAAGATATATCGGCGGTTTT
ACTCGGTAACCAACTAATCACTTTCAAGAGATACCAGAAAGGAGTTTTAG
CTATGAAGAATATGCAACACCGCGCCATAATTACTATAGACCCACAAGAT
GAACATCTTCGGAGAGTTCAGTTTTACGTAGTGATTAAGAAGAGCGACGA
TTCAAGACCCATAGCAAAAACAACATTGTATTATGATCAGGGAATACTGG
CCCTAGACATGAAGCTACTCTTTGTTGGCCTCCTAATGAGCGCTTTAACG
CTGGTTGTTGAGCTAACTTTAGTGTTCCGATTAAGGAGCGAGTATATGAA
TAACCTGAACAACGAACTGAATAATACACATCTAAAGGAGCTTGAAAATA
GACCTATGCTTCAATACATATTTGATGCACCACCGTTGAGTTTTCAGCAC
GAGAGAAGAGACTTAAGAGTATTACCAGTAGCGGTACAACAAACAGCATT
TGATGACGATGTTGCATTTTTTTCAGTACTGGTTCAACTACCAGGTTATC
AAAACTCGAAATGTGATATCACTTTTGGTACTGGGATTTTCCTTTTGAAA
AGTGAGACTAAAGATTCGAAAAGAATTGAAACTATTAAACGAACCACGAC
AGAAGAGTACGATCTAGAACATATTAATTACGGGCACAATATAGCATGAT
TTATTTTTTCTGGCGCTTTATAATACAGATATTAGACCATTAAAATTTTT
CTTACCATTTTTCTTTTCCCTCTTTCTGACCATCTTGCTCCACATCCGTG
TCAATCCAATGTTAAAAAGCTTATGAATTCAAATTGATGATTAAGCAAAC
GATACTAGTCTTATTCATAAAAAAAACCTTTTAATTTTGGACATATTTAT
ATTTACCACATTATCATTTTCGGAAACTTTTAATAAATAATATAAAATCT
TCGCGTATCAAAAACTTTGTAAACAGAATAAAAATGAACACCATAACATT
TAAAACGACTCAATTTAAAAATATGTAGGGAATATTGGTTTTTACCAAGG
CGTTATCTCCCAACATTTCCATTTAATCTCTAGCGAGTCAACTTCATTTC
GAAGGTATTTCATCAACTATCAAGAATAGCAATTTCTTCAATAATCAACC
AGTTTGGAATTCCTTTCGTTTTCTGGACAGCTGTCAACTCCAGTTTGACA
CACCGAACGTTTTCTTTAGGTTCATCAAAAGTAATATCAACTATTGCTTC
TTTGTAAAATTTCACCAGCTCAAACTTCCCACATTTCGAATTCGTGTTAC
CTTTCATTTGAGAGATGTATAATTTAGTTTCATAGAAGCTGTCTTTTTCA
TGTCCATCCATTCCGCTAGAGATAAAGATCCTCTTGATTTTCTGTGGAGA
ATTAAACATTATCGTCAGTGTGTCACCATCCTTAGGTTTTGTTGCCCACA
TTACACCTTTGCTCGAGTATGGGTTCTCTAACACATTGCTTTTATAGAAT
CCCGATAAATCCGATTCTATTTCGGCAACGGGATTTCCTTTTACCGATTG
GAATTGTCGTCGACCAACTATCGGGATATCCTTTAAATCCTCGAGTTTTC
TCACTTGACCATTCAAGGAAGAGAATTTACCGACATGCAAGAAAACAGGT
TTCTTTATGCGAAAATTCTTTGGATTTTTATACAAGTAGATATCATTATA
AACTCGAAAAAGTAAATCAACTGGCATGGTCCAAAAGAAATATCTGACAA
ATTTTGCCAACGATTCTAAATGCTCTCCCCGATAAGTCATTCCGATAAAT
CCTCGGGCACCAAGCTCAAGAACCGACCAACGAAGTTTGTCGTTTTTCGT
TATGAATTGTCGCATTTTCTGCATAAAATCATCAACAGCAATTATATCAT
CTTCAAGCTGAACAAAATATTGCGCCATATCTTTACAGTAATAATATAAG
TATGAATAATCGAGACATTGCTTCGATCTCCAGCGGACTCGATCTTGTTT
ATCGCCAAACAGTCTTGGCAAATTATCCAGATTCTTAGGATAGTAGGCTT
TATCAGGAGCAACCACTTGAATGATACCGTCTTTAACTTCGACTGGAAAG
TTCTCTCGAACATCTTTTACGACTTTCCTAAGAAAACCTTCGTCAAGATC
TGCCACAAAAATGACGATGACAACATTTTTCCTTTCTGAAGTTTTCATGT
GTTTGAGCAAAGAGGATACCGTTTGGATGACATAATAAGCTTTACTTCTC
TTGACGGTTGGAATCCCAAAAACAACGAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00057682-exon-scaffold_297-1575043694:119716..120282 | TCONS_00057682-exon-scaffold_297-1575043694:119716..120282 | Clytia hemisphaerica | exon |
| TCONS_00057682-exon-scaffold_297-1575043694:119007..119189 | TCONS_00057682-exon-scaffold_297-1575043694:119007..119189 | Clytia hemisphaerica | exon |
| TCONS_00057682-exon-scaffold_297-1575043694:117867..118000 | TCONS_00057682-exon-scaffold_297-1575043694:117867..118000 | Clytia hemisphaerica | exon |
| TCONS_00057682-exon-scaffold_297-1575043694:116726..116852 | TCONS_00057682-exon-scaffold_297-1575043694:116726..116852 | Clytia hemisphaerica | exon |
| TCONS_00057682-exon-scaffold_297-1575043694:112903..115449 | TCONS_00057682-exon-scaffold_297-1575043694:112903..115449 | Clytia hemisphaerica | exon |
| TCONS_00057682-exon-scaffold_297-1510915933:119716..120282 | TCONS_00057682-exon-scaffold_297-1510915933:119716..120282 | Clytia hemisphaerica | exon |
| TCONS_00057682-exon-scaffold_297-1510915933:119007..119189 | TCONS_00057682-exon-scaffold_297-1510915933:119007..119189 | Clytia hemisphaerica | exon |
| TCONS_00057682-exon-scaffold_297-1510915933:117867..118000 | TCONS_00057682-exon-scaffold_297-1510915933:117867..118000 | Clytia hemisphaerica | exon |
| TCONS_00057682-exon-scaffold_297-1510915933:116726..116852 | TCONS_00057682-exon-scaffold_297-1510915933:116726..116852 | Clytia hemisphaerica | exon |
| TCONS_00057682-exon-scaffold_297-1510915933:112903..115449 | TCONS_00057682-exon-scaffold_297-1510915933:112903..115449 | Clytia hemisphaerica | exon |
| TCONS_00057682-exon-scaffold_297-1491911889:119716..120282 | TCONS_00057682-exon-scaffold_297-1491911889:119716..120282 | Clytia hemisphaerica | exon |
| TCONS_00057682-exon-scaffold_297-1491911889:119007..119189 | TCONS_00057682-exon-scaffold_297-1491911889:119007..119189 | Clytia hemisphaerica | exon |
| TCONS_00057682-exon-scaffold_297-1491911889:117867..118000 | TCONS_00057682-exon-scaffold_297-1491911889:117867..118000 | Clytia hemisphaerica | exon |
| TCONS_00057682-exon-scaffold_297-1491911889:116726..116852 | TCONS_00057682-exon-scaffold_297-1491911889:116726..116852 | Clytia hemisphaerica | exon |
| TCONS_00057682-exon-scaffold_297-1491911889:112903..115449 | TCONS_00057682-exon-scaffold_297-1491911889:112903..115449 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_297 | supercontig | scaffold_297:112903..120282 - |
Blast
BLAST of TCONS_00057682 vs. Swiss-Prot (Human)
Match: MGT4B (Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B OS=Homo sapiens GN=MGAT4B PE=1 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 3.363e-53 Identity = 130/414 (31.40%), Postives = 208/414 (50.24%), Query Frame = -2
Query: 2409 VVFGIPTVKRSKAYYVIQTVSSLLKHMKTSERKNVVIVIFVADLDEGFLRKVVKDVRENFPVEVKDGIIQVVAPDKAYYPKNLDNLPRLFGDKQDRVRWRSKQCLDYSYLYYYCKDMAQYFVQLEDDIIAVDDFMQKMRQFITKNDKLRWSVLELGARGFIGMTYRGEHLESLAKFVRYFFWTMPVDLLF------RVYND----IYLYKNPKNFRIK-KP-VFLHVGKFSSLNGQVRKLEDLKDIPIVGRRQFQSVKGNPVAEIESDLSGFYKSNVLENPYSSKGVMWATKPKDGDTLTIMFNSPQKIKRIFISSGMDGHEKDSFYETKLYI-----------SQMKGNT------NSKCGKFELVKFYK---EAIVDITFDEPKENVRCVKLELTAVQKTKGIPNWLIIEEI 3554
VV GIP+V+R Y+ T+ SL+ + E+++ VIV+ +A+ D + V ++++ FP E+ G+++V++P +YP + L FGD ++RVRWR+KQ LDY +L Y + Y+VQLEDDI+A +++ M+ F + W +LE GFIG ++ L + +F+ F+ P+D L +V N + + N RI+ KP +F HVG SSL G+++KL+D KD G++ + NP AE+ + L Y+ LE Y + WA P GD + F P +++R F SG H +D + T + + + +G T S G ++ FYK E VD F P E +R ++Q P W+I+ EI
Sbjct: 144 VVMGIPSVRREVHSYLTDTLHSLISELSPQEKEDSVIVVLIAETDSQYTSAVTENIKALFPTEIHSGLLEVISPSPHFYP-DFSRLRESFGDPKERVRWRTKQNLDYCFLMMYAQSKGIYYVQLEDDIVAKPNYLSTMKNFALQQPSEDWMILEFSQLGFIGKMFKSLDLSLIVEFILMFYRDKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFKPSLFQHVGTHSSLAGKIQKLKD-KDF---GKQALRKEHVNPPAEVSTSLKT-YQHFTLEKAYLREDFFWAFTPAAGDFIRFRFFQPLRLERFFFRSGNIEHPEDKLFNTSVEVLPFDNPQSDKEALQEGRTATLRYPRSPDGYLQIGSFYKGVAEGEVDPAFG-PLEALRL------SIQTDS--PVWVILSEI 542
The following BLAST results are available for this feature:
|
