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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00057712 ID=TCONS_00057712|Name=TCONS_00057712|organism=Clytia hemisphaerica|type=transcript|length=1138bp
CTCTTAACATTTTTCCATCGCAAGTTTGGGGGGGGGAAACaaaagtactc
tatattttacgtatggggaagtgTAACAAAGATTTACAAgatagaaaagt
ttcgttttagggtaaagaatcagtattgtgaatttaatcgagtttctatt
ttgcaatttttctacatAGCCAAATAAaggtttttctattgttcttgctc
gattgcctctaagGATAAGTTCCAAAAGAATGAGGGTATTGAGACATAAT
ATGAGGAATTTGCGGGAAAACGAATTTTAACATTTCTCTAGGCTGCATGT
TGAATATATAGCTAGTCGTTTGGGAGAACGTGACGACCTATTGTCTATCT
GTCTATCTATCTAAATATTTAAATAACATCAGGCCGGAAGGCCCATTCTT
GCTACATATAAAAATACAATGATAGTCCTGTAAAAACCTTTATTACACGT
TGAactataaaaacaaataaaagaaagccTGAGAGGGAGTTGAGAATTTA
AGGTATATGTAAAAGTTTGGAATTCTGACAAAAATTGTGGTTTTCAGACT
GACAATCTTAGATTGAGATTAGTGCCAAAATCGAGATTGAACTTATGATA
ATAACgaatgaaattttaaatatcTTGAATACAATAAAATGTTAAATTAT
GATTataaatagtaaataaatataGTGAAAACTTTTTACTAGAAGTATTA
CTAGAAAATAgttaatttttcttaaaatgttcaatAAGTTTAGTTCTGAA
GAGATCCTCTTTTGTGATCTTTCTCAAATCAGTTGATAAATTGCTATTGA
CTCAGGTCTGCATATTAAATTACTCCAGCCAATTTCTGTGTTTGTGCCAG
ATGGAGAATGAGATGACAGCTGCTCGCGGTTTGCTTTTGACCACTGGATT
CCACTAGTTTTCTACAAGTTTCTACCCGTTTCTACTAGTTTTTCATTGGT
TTCCACTGGTTTGCACAAGCTTCAGGTTTTAGATTTAACAGAATTTAAAG
CTCAGGAAAGAGTGATATTTTCAGGCTTTCTACTTTATTTAATCATATAT
TTTGATTTGGGAGGGGTGTGATGGCTTCCAGGTTATATTTTCAACCTAGT
TAGAccattcacaagctttttggaTCCTCAAGTCTTAA Run BLAST on NCBI transcript from alignment at scaffold_297:176182..177319 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00057712 ID=TCONS_00057712|Name=TCONS_00057712|organism=Clytia hemisphaerica|type=transcript|length=1138bp|location=Sequence derived from alignment at scaffold_297:176182..177319 (Clytia hemisphaerica)
TTAAGACTTGAGGAtccaaaaagcttgtgaatggTCTAACTAGGTTGAAA
ATATAACCTGGAAGCCATCACACCCCTCCCAAATCAAAATATATGATTAA
ATAAAGTAGAAAGCCTGAAAATATCACTCTTTCCTGAGCTTTAAATTCTG
TTAAATCTAAAACCTGAAGCTTGTGCAAACCAGTGGAAACCAATGAAAAA
CTAGTAGAAACGGGTAGAAACTTGTAGAAAACTAGTGGAATCCAGTGGTC
AAAAGCAAACCGCGAGCAGCTGTCATCTCATTCTCCATCTGGCACAAACA
CAGAAATTGGCTGGAGTAATTTAATATGCAGACCTGAGTCAATAGCAATT
TATCAACTGATTTGAGAAAGATCACAAAAGAGGATCTCTTCAGAACTAAA
CTTattgaacattttaagaaaaattaacTATTTTCTAGTAATACTTCTAG
TAAAAAGTTTTCACtatatttatttactatttatAATCATAATTTAACAT
TTTATTGTATTCAAgatatttaaaatttcattcGTTATTATCATAAGTTC
AATCTCGATTTTGGCACTAATCTCAATCTAAGATTGTCAGTCTGAAAACC
ACAATTTTTGTCAGAATTCCAAACTTTTACATATACCTTAAATTCTCAAC
TCCCTCTCAggctttcttttatttgtttttatagtTCAACGTGTAATAAA
GGTTTTTACAGGACTATCATTGTATTTTTATATGTAGCAAGAATGGGCCT
TCCGGCCTGATGTTATTTAAATATTTAGATAGATAGACAGATAGACAATA
GGTCGTCACGTTCTCCCAAACGACTAGCTATATATTCAACATGCAGCCTA
GAGAAATGTTAAAATTCGTTTTCCCGCAAATTCCTCATATTATGTCTCAA
TACCCTCATTCTTTTGGAACTTATCcttagaggcaatcgagcaagaacaa
tagaaaaacctTTATTTGGCTatgtagaaaaattgcaaaatagaaactcg
attaaattcacaatactgattctttaccctaaaacgaaacttttctatcT
TGTAAATCTTTGTTAcacttccccatacgtaaaatatagagtacttttGT
TTCCCCCCCCCAAACTTGCGATGGAAAAATGTTAAGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00057712-exon-scaffold_297-1491911889:176182..177319 | TCONS_00057712-exon-scaffold_297-1491911889:176182..177319 | Clytia hemisphaerica | exon |
| TCONS_00057712-exon-scaffold_297-1510915933:176182..177319 | TCONS_00057712-exon-scaffold_297-1510915933:176182..177319 | Clytia hemisphaerica | exon |
| TCONS_00057712-exon-scaffold_297-1575043694:176182..177319 | TCONS_00057712-exon-scaffold_297-1575043694:176182..177319 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_297 | supercontig | scaffold_297:176182..177319 . |
Blast
The following BLAST results are available for this feature:
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