TCONS_00057752 (transcript) - C. hemisphaerica

Overview
NameTCONS_00057752
Unique NameTCONS_00057752
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3147

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00057752 ID=TCONS_00057752|Name=TCONS_00057752|organism=Clytia hemisphaerica|type=transcript|length=3147bp
AATTGCGCTTGGAGAACATGAATTGAGCTAATAGCCAATGTGGAATCATG
TCAGTGAGTTTCCTATTGTTCTCTCACACTATCTCACAAGTTTACGCATA
CATTTAACAAATTAATGTATGTATGTAAAGCTCCTTCTTTCCACTTGCCT
TAAGTAGGGAAAATTGGCCATGTTTAATCATTCACGCAACTAATCAAAAA
ACATATATGCATTTTTCGTATTATCAGACATGAGAATGCCTGTGTTAGTG
TTGCATGTCATTGTGTGGTCTATGTATTCTACTATATAATACAGAAGAGA
AGCCAACATGATAGTCGGAGAAGCACAGACAGAAAAACATCAAGAGATCT
AAGCTGCAGTAGGACATCCCATTCCACATCTTgcaataacaacaacaaca
acaacactcAAAGACGATGTAGCAAAAAATCTTCACCAACCCGACATGAT
TCAACATCCTCCAAGATAAAAAATGACGAGGAGGGACATCTTGTTTATAG
AGTGGGAGATCGCCTCCACGAACGCAGATGTACTTAAATACCTTTTAGTT
TGTTCGCTTCCCAAAACCATGCTATGCACACAATCTAATCTCAGGTTTAG
TTTAACATCAACAATAAAACGAGTTAGATGACTAATACTAGTCCCCAATG
ACCCTCTGACAAGAGGAATCACTCTATTGGCAGCAAAATACAAGTTGAAA
AACCTGTCACTAATCTGCTTGGTCTGAATTGAACTTCATTTAAAGGTGAC
AGTGACCAATAGGGGTTTGGATCTCAAATGGGTGGAATCTGGGCGCTTCT
TTTTTGGATATATTTTTATTGTGTTTTCCTTCTTTATTTCAGATAAAATA
TACGGCCTTCTAGGAGAGGGAACATTTGGAAAGGTTTTGGAATGTCACGA
TCGaaaacacGATCGACAGGTAgcaataaaaattataaaaaataaaaaga
aatatagaGAAGCTGCCAAACTTGAAATTGAAGTGTTCAAGCAACTAAGA
AAAAATGATCCTGATGGAAAACACAATTGTATCAAATGTTATGGAACTTT
TCGCCATGGTGGTCATGTTTGTTTAATATTTCCAAAACTTGGGAAAAGTG
TCTTTGAATTTATGAAAGACAATGACTACCAACCATACACATTGAAACAA
GTGCAGCATATAGCATATCAACTTCTCGATTCTGTCTGTTtTCTCCACAA
GATCAAATTGACACATACAGATTTGAAACCAGAAAATATGTTATTCGTAA
ATTCATCTTCACGGTCTATATGGAGTGAAAATGCTcgtcaaaatataaag
attttAGACCATTGTGATGTACAACTGATCGATTTCGGCTCCGCAACTTT
TGAACACGAGCATCACTCAAGAATTGTTTCTACGAGGCATTACAGAGCTC
CTGAAGTCATACTAGAATTGGGTTGGTCTTATCCTTGTGATGTGTGGAGT
TGCGGATGTATCATCTTTGAATTATACACCGGTGATGCCCTTTTTCGTAC
GCACGATAATTTGGAACACTTAGCCATGATGGAGAGAATATTAGGGAAAT
TAccaaagaaaatgatgaaagCTTCTGATAAACAAAAATACTTTCGTGAC
GGAGTATTGGATTGGGATGAGAAGGACCATAACGGACAATTTGTCAAAAC
GAACTGTGTTCCATTGAGAgagACGTTTAACTCGGACGACCGCCGTGCTA
CAGAAGAGCTTTATCATCTTGTCGACCGTCTATTAACTTACACACCTGAA
GATCGGCTGACGGCAAAAGAAGCTCTCTCTCATCCGTTCTTCAGTGAGGA
TATCTCTGCAAGAAAGAAGTGATATCACGTTTTTTAttcacaagaaaaat
attttcgaatcaCTTTTGTTGTAAAGAATTGTAAATACAGTATAGTATGC
CTCCCATTCAATTTCTTTTATAGTTGAGTAGCTCACATGcagagtacacg
ttttttttttttataagaacacctaagatttggctgagcctggatgtgct
tatttttttagcaattttcagcctaaaatgttcttaaatgcgttcttaat
ttttcatcagactactctaaatcgataatatgatacaaaataaagagcac
tttaATTTGGcacaatttggacaatatttgactctcgacttttgaagatc
cacccctaaattcggttaaaactgcttaaaaagaggaaaaaattgtagtt
tcttgtcatttttTTCCAAACTGAGGCTGGGCATGTTCTTAAcatgttct
taatttttcgacgaatttcagcctatatgttcttataaactaggttctaa
taaaaaaaaaacgtgtaccttggTAGAAGATTTTCTATAGCTTTGTGGGT
TTTGCAGACCTTGCATAAGTGCAACATTCTTGTACGGTTCAGGTCGAAAT
AAAACTACAGTTTactttcgctaattcgaactagagcgggaaattttatt
tgttcgaattacagagagacttgaattatagaaagtattttaagaaggTT
TCTCCTGTACGGGAACTGGAATTAAGTTCGAACTATCTAGAAAGATTCGT
CAAATGTTAaagacttttcacaaaaaaattttctttcacttGAAGTGGTC
TGACGGTACTTTTTTTCGGTACACGCTGCATATCCTCTTTATTGTTTCAC
AACTTCGTTCCCTGTTTATTTTCCTCTAAAGAATcttgcattgtaacacg
catgcgtaatttgtcgttcttttaaaccatatgtagttaattcccgtgat
aaaaaAAAGGAATGAATTCGTAGGGGTGGAAATTTGTCGTTccatttgtc
tatttttagtaaatgtagGATCATTTAGATAAACCCTCTCCTGCGTCTTA
TAAGCTTTTTGATACTTACTGATAGCACCAGATAATTCCCTGGCGTCTAT
CATCAACGTAAATAAAGCTTGGACTACACGGGAACGAGGTTGATTGTTtc
ataaaagtaaaatatttctttgtcCTCATGTTCCAAGATccttttttaaa
ttatatagaaaacttgtttgtttttataCTACGTTTTTCATACTACTATT
TTCAATACAATGAAATGAGTGTATTATATTATACATTGTTatattgaatg
aatgaataattAGTCCAAAATATATTTATCCAAAACAAATCGCTCGC
Run BLAST on NCBI

transcript from alignment at scaffold_298:352055..360202+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00057752 ID=TCONS_00057752|Name=TCONS_00057752|organism=Clytia hemisphaerica|type=transcript|length=8148bp|location=Sequence derived from alignment at scaffold_298:352055..360202+ (Clytia hemisphaerica)
AATTGCGCTTGGAGAACATGAATTGAGCTAATAGCCAATGTGGAATCATG
TCAGTGAGTTTCCTATTGTTCTCTCACACTATCTCACAAGTTTACGCATA
CATTTAACAAATTAATGTATGTATGTAAAGCTCCTTCTTTCCACTTGCCT
TAAGTAGGGAAAATTGGCCATGTTTAATCATTCACGCAACTAATCAAAAA
ACATATATGCATTTTTCGTATTATCAGACATGAGAATGCCTGTGTTAGTG
TTGCATGTCATTGTGTGGTCTATGTATTCTACTATATAATACAGAAGAGA
AGCCAACATGATAGTCGGAGAAGCACAGACAGAAAAACATCAAGAGATCT
AAGCTGCAGTAGGACATCCCATTCCACATCTTgcaataacaacaacaaca
acaacactcAAAGACGATGTAGCAAAAAATCTTCACCAACCCGACATGAT
TCAACATCCTCCAAGATAAAAAATGACGAGGAGGGACATCTTGTTTATAG
AGTGGGAGATCGCCTCCACGAACGCAGATGTACTTAAATACCTTTTAGTT
TGTTCGCTTCCCAAAACCATGCTATGCACACAATCTAATCTCAGGTTTAG
TTTAACATCAACAATAAAACGAGTTAGATGACTAATACTAGTCCCCAATG
ACCCTCTGACAAGAGGAATCACTCTATTGGCAGCAAAATACAAGTTGAAA
AACCTGTCACTAATCTGCTTGGTCTGAATTGAACTTCATTTAAAGGTGAC
AGTGACCAATAGGGGTTTGGATCTCAAATGGGTGGAATCTGGGCGCTTCT
TTTTTGGATATATTTTTATTGTGTTTTCCTTCTTTATTTCAGATAAAATA
TACGGCCTTCTAGGAGAGGGAACATTTGGAAAGGTTTTGGAATGTCACGA
TCGGTAAGCATCATGATTTGTTATTTCCTTCTCAGAAATTTTATAAATGG
ATATTAAGACTTCAGGcatcttcttatttttttaatagGGGTTGCATCTT
CGGTGGGGGGGGCTCAATTTGATTGATGTGAGATTTGTCTTTTACataaa
atgctcactttcagcataaccACTTGTCCAAATTTGCTGAAACTTTGGCT
ACAAGCTTGTATTACCAATACCTAACACTTGTCAATAGCATTTTTTCCAA
TCACTACAGTATCCTAGGGCTGTTTAGGCAAAAAAGGGCAATTCTGGGCC
GGTCTGCAAAATACACAATACAaacatgtgaaaaaaatttacccTCTGCC
CCAAAAGTTCATGTCACTAGGAGTTTCCtaacaaaattttatcaaaaaaa
gttagGCAGGAGGTCCTTTTTTCGGTATTTTGCAACAATGATGACGCCTC
TCCCCCAAGATGCTTAAAGGGTTAATCTAAGTAGTAATTGTTGAAAAACC
ATTTGACAAACTATATTGAACTATGCAGATTATTTTCTTAATTCTACAAT
TattctaacttttttttgtagaaaacacGATCGACAGGTAgcaataaaaa
ttataaaaaataaaaagaaatatagaGAAGCTGCCAAACTTGAAATTGAA
GTGTTCAAGCAACTAAGAAAAAATGATCCTGATGGAAAACAGTAAGTCCt
gtccatttttgttttttttcttccccATGTTTCTTATTATTTCTCAAGTT
TTTTACATCTTTAATGGGGTAAATTCNttttttttttcttccccatgttt
tttattatttctcaAGTTTTAACATCTTTAATGGGGTAAATTCAGAAGAA
TGTATACTTACTGTATTACTTCTATTAAACGCCCCAGATATTATGTCCCT
CCTAGAGGGGAGGCATTTATTTGAGGGGAtgcttattgaaaaaaaatttt
ccagtaaGGGGCATttaataaatttgataaaggAGAGGGGAcctttattc
aaagtaataggGTTAGTAGTAACAGAAGTGTTACCATTTATTCTACTAGG
TTGTCTTTGTTACAAATTGACCCAATTTTCACTCAACTATAATAACCAAT
AAGTATTTTGTGATAATTTCAAGTCTGTTGAATACATGACCAGTTTTTTG
TAGaggattgattgattgattgattgattctttTTTTCTAGCAATTGTAT
CAAATGTTATGGAACTTTTCGCCATGGTGGTCATGTTTGTTTAATATTTC
CAAAACTTGGGAAAAGTGTCTTTGAATTTATGGTAGGTTAACTTCACTTA
CAtagtttgaatatatttttttgtttaacaCTAAAGCATACTGCACAGTT
CCGTTTCTGAAGCTTTGTTGTCACTTGAGCATGGGCGGCATTTCTCTGTA
AACCCTAAGGAATCGTTACTGGTTAATTTTTGCATAGAGATTTATTTATA
TTCAATGATAATGTTAATGGGGCATAATGTAATCATTTCctaaagaaaat
caaatccCCATGTTCTAAATAAATTTCTATACAATAGAAACAAGTAAGAA
GCTTTGAtttaatgttttgaatttttaaaaacatcttgTTTACAATTTCT
TTAGAAAGACAATGACTACCAACCATACACATTGAAACAAGTGCAGCATA
TAGCATATCAACTTCTCGATTCTGTCTGTTGTAAGTTTTCTTCAAGGCTT
GCATCTAAATCTTTCTCTTGAAAGTATTACATTTCAATACGTTTAGTGTT
CGTTTTTTTCAAGTAGCTATCATTCCATCAATTAGGAGTGCtagttttta
aataatttgCAATTGATTTTGAAAACCTGAAAACTATAACAGTACTTTTA
ATTTTGGTAATaagaattttacaaaattgctgAAAGTTattatgtttatt
ttttcagtTCTCCACAAGATCAAATTGACACATACAGATTTGAAACCAGA
AAATATGTTATTCGTAAATTCATCTTCACGGTCTATATGGAGTGAAAATG
CTGTAAGTAGGGGATGATAGAATTTGAAACAATTACCAAGCTTCGAGATT
AGTGTGAAAATAATGTGGGCTTGGTGTCACCTAATCATCCCTATTCAAAA
TCTAccgagtttttttgtttttttatgcaTTCTTAGCCTAAAAAAGTAAA
AGtcatttttagtaaaaaaaataagatttttgtttgttttacgAACCTTG
ATTAAGACCTATGGGAGAAGGCGAATGGTCATTGAGACTTGGAGGGATAG
TGTTCTCAACATCAAGATACTAGATAGTAGACAATACTTCATTTCCTGCA
AACCtctgaaaaaatcttcaattgaaatatttttcttctttcttcagcgt
caaaatataaagattttAGACCATTGTGATGTACAACTGATCGATTTCGG
CTCCGCAACTTTTGAACACGAGCATCACTCAAGAATTGTTTCTACGAGGC
ATTACAGAGCTCCTGAAGTCATACTAGGTAGGTTCATACAGTCTCacagt
acactttttttataagcaagtgtctgcctcTTGGTCAGGCTCAAGCATGC
TTAAGCTTTCAAAACATCCAGGCATAgcatatgcttattatatgcttata
aattaTTATGCTCTTGATTCACCCAAcccaattttttataaaattttgct
aACACTCGATTCAAattaggaaatctgcaaatctgagcctttgTATGCTt
ttaagcgttatgcttataataaaTATATGTATGTGATTATCATATTACAG
ACTTGTGGCTTTAAATTTTTCCTGATGCTTTCTTTCCCAAAACTTGAAAA
TAGTGTTATTTGTATTAGACTGGGTTAGCCTGGTTTTTACTTAATCTTAT
GTATGAACATGGGAATTGAAGTCATTCTCTTTTATTATCGACCGATGTCG
AGCTTTATGCAAGCTAATGGTGTTTGATTTTAAGATATTACCATTATCAC
AGGTTCAATCATATGCGAACGTACTACCATTCCAAACATTCTTTCTACCC
TTCTTTAGAATTGGGTTGGTCTTATCCTTGTGATGTGTGGAGTTGCGGAT
GTATCATCTTTGAATTATACACCGGTGATGCCCTTTTTCGTGTAAGTTCC
TTCATACAGGAGACGTTAgattgtatttattttcaaatttaattcttaTT
TCGAAATCTAGTTCTATCTATCTCTAATTTTCTTAGATTTGTATCGTGAG
AAATTGTCTTAGTTCTACTCGGTCAAATTGGGTggttgggcttttccaga
aaaatatttaatatgGGGGGGTGGAGaatattaactttttttggaaattt
acaatcgaaattacccctaaacaaagcaagtttacccccccccccgNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGTGTGGCCTCTT
TCCTCCAAAGAATCActtagtaggcatgatgtcttgtactaactgcttga
cccccccccctgcttaaaGTGTTAAAAAGGTTAAGATGATTTGACCCTTT
GTTATTTGTAACGTTTTCCTGacttttcaaagagaaaataggATTTGTTG
GTCAGAGACCAACAAAAAGtattaaattctaaaaatgaaacataaatatt
tttacaatacAAATCATCTATCCACAGACATGtgtttcgtccttcccagg
actcatcAGTGCGGCTCGGGTAAGCGTGCATAGACTGActgttgtcacca
gagtgctcaGAGCACTAAGTGTTGAGCTTcgcataatcgcttgtggtgaa
CGGAGAAGCAGAGCTTGCTCCTCAAAACAAATCATACATTTTTCTGTTCC
TCTTTTAGACGCACGATAATTTGGAACACTTAGCCATGATGGAGAGAATA
TTAGGGAAATTAccaaagaaaatgatgaaagCTTCTGAGTGAGTGAATCT
CATGTAATTTTACGTTTACGTGAAGGCCGACATCTTCTTCCATTTACTTA
CACAGCATATTTAAACAAAAGGAAAAGAACAGCTCTCTCCCTTTTCGGGA
GAATATGAAACATTatgagaaattctattgtttttgttTCGTCAGCATAG
AGAAATATTATAAACATCGAGTCTAAGGCAAATACGTACATGCGGTTTCT
CAACGGATTCATTATGCTTAATTTCCATACTAAAAATTACAGTCTTGtcg
ttttattgatttttgtcATATCTATGTAAATTTTTATTCTTGTCCGTATA
AAAGTTTTGGGGTACTGTAATTTATAAGGTCATGAGctgtttttctaatt
ttgtcgtttattttctcgattttttttcaGTAAACAAAAATACTTTCGTG
ACGGAGTATTGGATTGGGATGAGAAGGACCATAACGGACAATTTGTCAAA
ACGAACTGTGTTCCATTGAGAGTAAGTTTTTCAAATCCTTAACTgctctt
tttgcttttttttgcaAGAGAAACCTTTTTTCAATAGACTTGCTTCGATT
TACTTTAAGGGACTGCGTAAGATATTacctttttagaaattttcaataac
acgttttttataagaacagaccttataatgtaagaacataagactgTAAA
ATGACCAAAATTAACACGAACaagttttaagaacattttcttataatttc
ttaggaaatcgcACAAAATATGGTGAAGATgataacattttaaaaacatt
tttaggcttaacattttcattttctagaaGAATCTAACCCTGATCAAATA
CAATATACAGTGAATGTTTTGTAGTATCGTTGGGTTTTCAAATTGATCAT
GAAAAAGCGAAAATATCCAGTTTTCCTTCAGTTGGAGTCAATTGTATAAA
AtctctattttttttctcaggagACGTTTAACTCGGACGACCGCCGTGCT
ACAGAAGAGCTTTATCATCTTGTCGACCGTCTATTAACTTACACACCTGA
AGATCGGCTGACGGCAAAAGAAGCTCTCTCTCATCCGTTCTTCAGTGAGG
ATATCTCTGCAAGAAAGAAGTGATATCACGTTTTTTAttcacaagaaaaa
tattttcgaatcaCTTTTGTTGTAAAGAATTGTAAATACAGTATAGTATG
CCTCCCATTCAATTTCTTTTATAGTTGAGTAGCTCACATGcagagtacac
gttttttttttttataagaacacctaagatttggctgagcctggatgtgc
ttatttttttagcaattttcagcctaaaatgttcttaaatgcgttcttaa
tttttcatcagactactctaaatcgataatatgatacaaaataaagagca
ctttaATTTGGcacaatttggacaatatttgactctcgacttttgaagat
ccacccctaaattcggttaaaactgcttaaaaagaggaaaaaattgtagt
ttcttgtcatttttTTCCAAACTGAGGCTGGGCATGTTCTTAAcatgttc
ttaatttttcgacgaatttcagcctatatgttcttataaactaggttcta
ataaaaaaaaaacgtgtaccttggTAGAAGATTTTCTATAGCTTTGTGGG
TTTTGCAGACCTTGCATAAGTGCAACATTCTTGTACGGTTCAGGTCGAAA
TAAAACTACAGTTTactttcgctaattcgaactagagcgggaaattttat
ttgttcgaattacagagagacttgaattatagaaagtattttaagaaggT
TTCTCCTGTACGGGAACTGGAATTAAGTTCGAACTATCTAGAAAGATTCG
TCAAATGTTAaagacttttcacaaaaaaattttctttcacttGAAGTGGT
CTGACGGTACTTTTTTTCGGTACACGCTGCATATCCTCTTTATTGTTTCA
CAACTTCGTTCCCTGTTTATTTTCCTCTAAAGAATcttgcattgtaacac
gcatgcgtaatttgtcgttcttttaaaccatatgtagttaattcccgtga
taaaaaAAAGGAATGAATTCGTAGGGGTGGAAATTTGTCGTTccatttgt
ctatttttagtaaatgtagGATCATTTAGATAAACCCTCTCCTGCGTCTT
ATAAGCTTTTTGATACTTACTGATAGCACCAGATAATTCCCTGGCGTCTA
TCATCAACGTAAATAAAGCTTGGACTACACGGGAACGAGGTTGATTGTTt
cataaaagtaaaatatttctttgtcCTCATGTTCCAAGATccttttttaa
attatatagaaaacttgtttgtttttataCTACGTTTTTCATACTACTAT
TTTCAATACAATGAAATGAGTGTATTATATTATACATTGTTatattgaat
gaatgaataattAGTCCAAAATATATTTATCCAAAACAAATCGCTCGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036407XLOC_036407Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00057752-exon-scaffold_298-1491911889:352055..352957TCONS_00057752-exon-scaffold_298-1491911889:352055..352957Clytia hemisphaericaexon
TCONS_00057752-exon-scaffold_298-1510915933:352055..352957TCONS_00057752-exon-scaffold_298-1510915933:352055..352957Clytia hemisphaericaexon
TCONS_00057752-exon-scaffold_298-1575043694:352055..352957TCONS_00057752-exon-scaffold_298-1575043694:352055..352957Clytia hemisphaericaexon
TCONS_00057752-exon-scaffold_298-1491911889:353526..353645TCONS_00057752-exon-scaffold_298-1491911889:353526..353645Clytia hemisphaericaexon
TCONS_00057752-exon-scaffold_298-1510915933:353526..353645TCONS_00057752-exon-scaffold_298-1510915933:353526..353645Clytia hemisphaericaexon
TCONS_00057752-exon-scaffold_298-1575043694:353526..353645TCONS_00057752-exon-scaffold_298-1575043694:353526..353645Clytia hemisphaericaexon
TCONS_00057752-exon-scaffold_298-1491911889:354146..354236TCONS_00057752-exon-scaffold_298-1491911889:354146..354236Clytia hemisphaericaexon
TCONS_00057752-exon-scaffold_298-1510915933:354146..354236TCONS_00057752-exon-scaffold_298-1510915933:354146..354236Clytia hemisphaericaexon
TCONS_00057752-exon-scaffold_298-1575043694:354146..354236TCONS_00057752-exon-scaffold_298-1575043694:354146..354236Clytia hemisphaericaexon
TCONS_00057752-exon-scaffold_298-1491911889:354559..354634TCONS_00057752-exon-scaffold_298-1491911889:354559..354634Clytia hemisphaericaexon
TCONS_00057752-exon-scaffold_298-1510915933:354559..354634TCONS_00057752-exon-scaffold_298-1510915933:354559..354634Clytia hemisphaericaexon
TCONS_00057752-exon-scaffold_298-1575043694:354559..354634TCONS_00057752-exon-scaffold_298-1575043694:354559..354634Clytia hemisphaericaexon
TCONS_00057752-exon-scaffold_298-1491911889:354862..354956TCONS_00057752-exon-scaffold_298-1491911889:354862..354956Clytia hemisphaericaexon
TCONS_00057752-exon-scaffold_298-1510915933:354862..354956TCONS_00057752-exon-scaffold_298-1510915933:354862..354956Clytia hemisphaericaexon
TCONS_00057752-exon-scaffold_298-1575043694:354862..354956TCONS_00057752-exon-scaffold_298-1575043694:354862..354956Clytia hemisphaericaexon
TCONS_00057752-exon-scaffold_298-1491911889:355302..355431TCONS_00057752-exon-scaffold_298-1491911889:355302..355431Clytia hemisphaericaexon
TCONS_00057752-exon-scaffold_298-1510915933:355302..355431TCONS_00057752-exon-scaffold_298-1510915933:355302..355431Clytia hemisphaericaexon
TCONS_00057752-exon-scaffold_298-1575043694:355302..355431TCONS_00057752-exon-scaffold_298-1575043694:355302..355431Clytia hemisphaericaexon
TCONS_00057752-exon-scaffold_298-1491911889:355963..356045TCONS_00057752-exon-scaffold_298-1491911889:355963..356045Clytia hemisphaericaexon
TCONS_00057752-exon-scaffold_298-1510915933:355963..356045TCONS_00057752-exon-scaffold_298-1510915933:355963..356045Clytia hemisphaericaexon
TCONS_00057752-exon-scaffold_298-1575043694:355963..356045TCONS_00057752-exon-scaffold_298-1575043694:355963..356045Clytia hemisphaericaexon
TCONS_00057752-exon-scaffold_298-1491911889:357713..357792TCONS_00057752-exon-scaffold_298-1491911889:357713..357792Clytia hemisphaericaexon
TCONS_00057752-exon-scaffold_298-1510915933:357713..357792TCONS_00057752-exon-scaffold_298-1510915933:357713..357792Clytia hemisphaericaexon
TCONS_00057752-exon-scaffold_298-1575043694:357713..357792TCONS_00057752-exon-scaffold_298-1575043694:357713..357792Clytia hemisphaericaexon
TCONS_00057752-exon-scaffold_298-1491911889:358185..358275TCONS_00057752-exon-scaffold_298-1491911889:358185..358275Clytia hemisphaericaexon
TCONS_00057752-exon-scaffold_298-1510915933:358185..358275TCONS_00057752-exon-scaffold_298-1510915933:358185..358275Clytia hemisphaericaexon
TCONS_00057752-exon-scaffold_298-1575043694:358185..358275TCONS_00057752-exon-scaffold_298-1575043694:358185..358275Clytia hemisphaericaexon
TCONS_00057752-exon-scaffold_298-1491911889:358725..360202TCONS_00057752-exon-scaffold_298-1491911889:358725..360202Clytia hemisphaericaexon
TCONS_00057752-exon-scaffold_298-1510915933:358725..360202TCONS_00057752-exon-scaffold_298-1510915933:358725..360202Clytia hemisphaericaexon
TCONS_00057752-exon-scaffold_298-1575043694:358725..360202TCONS_00057752-exon-scaffold_298-1575043694:358725..360202Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_298supercontigscaffold_298:352055..360202 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.254995	0.221091	1.08025	0.0265901	0.100171	0.151558	0.469404	1.62867	0.0204099	0.0256637	0.18848	0.127353	2.44063	2.99724	2.46977	2.50254	0.824427	2.21523	6.29137	0.511997	0.124103	0.0580058	0.138666	1.98754	1.51221	1.47678	4.2904	0.839594	1.27218	0.951509
Blast
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BLAST of TCONS_00057752 vs. Swiss-Prot (Human)
Match: CLK2 (Dual specificity protein kinase CLK2 OS=Homo sapiens GN=CLK2 PE=1 SV=1)

HSP 1 Score: 363.229 bits (931), Expect = 2.634e-113
Identity = 174/318 (54.72%), Postives = 231/318 (72.64%), Query Frame = 2 
Query:  845 KIYGLLGEGTFGKVLECHD-RKHDRQVAIKIIKNKKKYREAAKLEIEVFKQLRKNDPDGKHNCIKCYGTFRHGGHVCLIFPKLGKSVFEFMKDNDYQPYTLKQVQHIAYQLLDSVCFLHKIKLTHTDLKPENMLFVNSSSRSIWSENARQNIKILDHCDVQLIDFGSATFEHEHHSRIVSTRHYRAPEVILELGWSYPCDVWSCGCIIFELYTGDALFRTHDNLEHLAMMERILGKLPKKMMKASDKQKYFRDGVLDWDEKDHNGQFVKTNCVPLRETFNSDDRRATEELYHLVDRLLTYTPEDRLTAKEALSHPFFS 1795
            +I   LGEGTFG+V++C D R+   +VA+KIIKN +KY+EAA+LEI V +++ + DPD K+ C++ +  F + GH+C+ F  LG S F+F+KDN+Y PY + QV+H+A+QL  +V FLH  KLTHTDLKPEN+LFVNS     ++   +++ + +    V+++DFGSATF+HEHHS IVSTRHYRAPEVILELGWS PCDVWS GCIIFE Y G  LF+THDN EHLAMMERILG +P +M++ + KQKYF  G LDWDE    G++V+ NC PLR    S+      +L+ L++ +L Y P  RLT  EAL HPFF+
Sbjct:  164 EIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAMMERILGPIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKPLRRYLTSEAEEH-HQLFDLIESMLEYEPAKRLTLGEALQHPFFA 480
The following BLAST results are available for this feature:
BLAST of TCONS_00057752 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CLK22.634e-11354.72Dual specificity protein kinase CLK2 OS=Homo sapie... [more]
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