|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00057790 ID=TCONS_00057790|Name=TCONS_00057790|organism=Clytia hemisphaerica|type=transcript|length=2144bp TACACTACATGCTATACGAAAGTATTGACAGATTGAAGAACAAAATAAAG ACAATTaccacaaaaacaacaacaagccTACAATATGGAGGATCTTATAG ATCCAGAATCCCTGCATTCAAAGACTGGATTCAAAACAATACAACTTATT GGTCGTTTGGTTATTATTTTGATTATACGCTTTTGGAAAGCATGTAGTAT TGGCTTATtattagtttttcttttgttttggttgTATGGGGGTATAGCAA CAATGTTATTGTTAACTTGCGCTTTTGTTGGTGCTTTTTATCATTATCAA GATGCGTTATTATATTTTCCTGATCAACCAGAAAATTCACGGATATATGT GCAATCGCCAAGACTTCTAGGAGTCCCTTATGAAAATTTACATATTCAAA CTCGTGATAGTGTATCGCTAAATGCAATATTTTTGAAGCAACCAAGTAAT AGACTATCAATAGCACCAACTATAGTTATGTACCACGGTAATGCAGGAAA CATTGGGCATCGGTTATCAAATGCTTTCCTGTTGTATACATATACTGGGA GTAATGTTTTTTTACTGGAATACCGCGGTTATGGGAAAAGTGAAGGATCG CCCAGTGAAAAAGgttttgaatTAGATGGTGTTGCATCATTAGAGTATTT GTTAAGCAGGCCAGACATTGACCATCAGAAGTTGATTTTGTATGGTAGAT CTCTTGGTGGTGCTGTAGCTTTTAATATTGCTGCCTTAGAACAATATACC AATTTCCTTTTTGCGGTGATTGTTGAAAATACTTTTACAAGCATCCCAGA AATTtcgaaatatcttttcaaatatttgaagGGGCTTCCTGAATGGTGTT ATAAGAATAAGTTTCTATCAATAAACCGAGTAAGGCTTATAACGACACCA ACTTTATTCCTTTCTGGATTATCTGATCAATTGGTCCCTCCAAATCACAT GCTCAAACTTTATAATacGTCAGAGTCTGACATGAAGCGAATGGAAACCT TTGAGTCAGGTACACACAATGAAACATGGCAATGTCAAGGTTATACTGAA GCTATCAACAGGTTTCTAAATGATGTTTACAGTGCGCACCAAGAAGGTCG TCTACCACGAACAGAAAAGAAGAGAAGGAAAACCAATGACCTTATAGATA TCTGAAGAATGGAATATTGTGGTGAAGTCTTTATTCAGTATTAGCTTATT CACAGTGTTGCAACTTTTCTGTCTGTCGACAGAAATCTGCTCAGTTGAGA TGCAAACACGCGATTTCCGTCTTACTAGTAAGAGAGCTTTGGTCAACACC ACAAAATAATTATGATTTTCgttcaaattcataaaacctAGTTGCAACAC TAGTATTTAGTATTCTTCTAAAAACAACGACCTTATCTATGATACTCCGA TGAGTTGAAGATGCAACAAGAAATCTCATGATCCATAGTATATTAGAGTG CCTTTTTTTGAGATAAGCACCAGCATCATGAACTGGTTTACCTTTATTGA AATAAGAGAAAAGTAACCTTGTTGATATCTGAAAGATGATTTCTAAAGGT CATTTTTTCAACTGTAAATGGTGGTCCCGGATGACTTTGGtgtataattt ttctttttgaaagaattttggcaTTGGGGTGTTTAGAGAAAATGCATTTT ACTGTAAAATCATGTCCAGTCCACtaacctttatataccctggaccaagt ttttcaatcccggccaagtaaaatctttgattggagttttctGAAAAGTG GATATTTCATTTGTAATGCTATTGAACCTTAAAAAGTTCAACATAAACAA GAATTTTTATGCAACCTTTTTTGCTCTTGATTGATTTCAGATAGAATCTT TAAAGCCAGATTTTGTGGTCCATATGTTTCGTATTTATATTGGCAGGgtc cattttgttttgaagggTATATTTAGCCTTGGTAAAAATTGGTAGGATCA CATAAAGCACATTTATATCAAAGGTGTAGATATTTATCAAAATgaatttt agtatttttctgtttttgaatTATCACAAATGTTTTTTATGTACTAATTA TTGTAAGTATATTATTTGAacgtttttctaaaaaaaaacaatgggaAAAT TATGGTAATATTTTCTAAAGATCTCTTCACCCTTTGGAAGTTCC Run BLAST on NCBI protein sequence of TCONS_00057790-protein >TCONS_00057790-protein ID=TCONS_00057790-protein|Name=TCONS_00057790-protein|organism=Clytia hemisphaerica|type=polypeptide|length=356bp
MEDLIDPESLHSKTGFKTIQLIGRLVIILIIRFWKACSIGLLLVFLLFWL YGGIATMLLLTCAFVGAFYHYQDALLYFPDQPENSRIYVQSPRLLGVPYE NLHIQTRDSVSLNAIFLKQPSNRLSIAPTIVMYHGNAGNIGHRLSNAFLL YTYTGSNVFLLEYRGYGKSEGSPSEKGFELDGVASLEYLLSRPDIDHQKL ILYGRSLGGAVAFNIAALEQYTNFLFAVIVENTFTSIPEISKYLFKYLKG LPEWCYKNKFLSINRVRLITTPTLFLSGLSDQLVPPNHMLKLYNTSESDM KRMETFESGTHNETWQCQGYTEAINRFLNDVYSAHQEGRLPRTEKKRRKT NDLIDI Run BLAST on NCBI transcript from alignment at scaffold_298:336656..347866- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00057790 ID=TCONS_00057790|Name=TCONS_00057790|organism=Clytia hemisphaerica|type=transcript|length=11211bp|location=Sequence derived from alignment at scaffold_298:336656..347866- (Clytia hemisphaerica) TACACTACATGCTATACGAAAGTATTGACAGATTGAAGGTGGGATAAATG
ATTCTGTTACTCTTAGTATTTGTGTTTTGATAGGTTTTGAGATGATAGGT
TGGAAGACGATATCATCCACCAGGAGCAGGATGCAAGTGAAATTTTTCAA
TCTACGGACCTAGACGGGCCACGGGTGCATGTCACTAGTCCGACACTATC
TAGTCCGACAGTGAAATAGTCCGAATCTTTAAAATAAATTTACAATTTGG
AAGACTTTTTTTATGACGTCACTTTTGTCCGAAAACGAAAGATTTTAGAG
TGTCGAATGTTGAATAAGGGTTTTTCACAGAGATAATATTAATAAAAGAT
CATTTTGGCGGCATTTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNAGGACCAACCAGGGTTGTAAATCACTAAAGAAGGGTCGTAA
AAACAGCTAAATCCAATTTCTTGACTCTTGAAAGCCTATCCTAACAAGCT
TCCCAAAATTTAAAAGTCTGGTTTAGGGGCCTAACCTCAAAATCCGGAAC
GTTGGATTTTTATAAAGATGTGCCTCCGATTCATATTTCGTTTTTCATAT
GTTTTTTTTGACTCGTTGTCGGACAAAATTGTTGTCGGAATATTGACAAA
AAAGTAAGTTGACGCATTCGTCAAATCCAACGTCGGACATTTTTACTGTC
GGACTAGAAAGTGTCGTACTACTGACGACCTCCCTGCTAGATGGGGGTAC
GGTTATTATCAGTTAGGCTAGGGTTAGGGTTGGAGCTCGAGAGTCACAAT
ATAAGGCCGAAGGCCTTCTTAGGGGCATCCGTACCCTGTGACCTAACTTA
GGATTCCGTAGGGATCCTTGTTGGGGCACCGGTAGGGTTGGGAGCTTTCT
TAATAAAGGTCTGTAAATTACACACTATAAGTATTTGTGAATGACAGCAT
TCTGCTGTGTCTCGTTGGCGCTAGCGGTTAGTCATTGGGTTTGTAAACCA
AGATTGCTTGCATTTGCAGCCCTGGCAATTCAATTATTTTGGCCTTGGCA
TTTTTTTGCCGAAGCAAATGGCTAAATTTGCTGTTTGCCTCGGCAGAATA
GGATTCTGCCTCAGCATTTTCCCCAATTTAAAATTTAAAATTGTGTTTAA
AAAAGCAGACAGCTGGAGATCTATAATTGATTTTGTAGTTCTTCGATTGT
TTCGACAGTTATCATTTTTAGTAAAAGTCTTTTGAAAAATTTTGCCTCGG
CATTTTTTTTGCCGACGCAAACACACTATAAACCAATTTACGTCAGCTTT
TGCCTCGGCATTTGCCGTATGCCGACCCGAATTGCCAGGACTGATTTGGT
GGTTCGAGCCGGGGTCGGAGACCTATTTCACCGGTACGGGAAAATTTCAG
AAAAATACTTAGAAAACAGTTAGAAACACTAGAGAAAGTCAGAAAATCAG
GATAGAAGATAGGAAAGTAGAAAATATGGGGAAAATAAGAGAGGTTGCAT
CCTGGTGGATGATATCGTTTGCCAACCCGATTGATAGCTATCCCAGAAGA
TGTCAGTTCGAACCATCAAACAGTCTAAGCTTAAAATCCTACATCAGGAT
TAGAAACTAGGCTAGACTTACCTCTTTTATCTTTCCCTTTACAACAATAC
AATACTGGCGAGTTGACACAACACATTGACAAGTAATCCTTGTGGGAGAA
ATTTATATATCAAAATCTGCAACAAAAACGAAAGTGGTCTCTTATAAACT
GATTGCTTCCTGGCGCTCCTTCGCAGTTTATCAAGTTTCCAACAATGAGA
TTGCTGCATTTCACACGGTCCTTCTTTTTGATACCCATAGCCTCTCAGTG
CCTTGCACGAAGAGCGGCTGTAAAATTCCACCCTTCATATATTTGTTTCA
ATCAGTTATATCATAAAAGGCTTAGGTTTTTTTCTCATCTTCAATTTACT
GAAGAAAGTGGGAATTTGATGTGAGAGTTAGATTGTCAACAAAGTGCCAT
AAGAAATCATTGAACAGTGCGTCACAAACAGCGATATTTCAATTGCACGG
AAGTACTTCAAAACACCAGCTTTTTTTGAGTTTTGTCTCGTTTACCCAAA
CGCTTCAATCTCACGTAGGCTTAGTGGTCAAGACTAGAACCCCCAATACA
AGACATTTGCCTGACCGAAAAAAAATCATCATCATCAATTTTGTTAATTG
TCAGAATCGTTTACTCACTGGAAATACGCAACTTTCTGAAGTTTCGTTTT
TTTTCGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACGAAAAGTGCG
CTCGCGCGGCGAATAGAATATCTCGCAAATTAATATATGCATAAAACTGA
CGAAATCCTTTCTTTTTTATGCTTAGGTGACGTCACCATGATCGATACTG
ACTTGACAATGGAGAACCAAATTTGGCAATGCATAATTATAACAAGCGGC
CAAGAAAGTTTGTGTGACGCAAAAATTGCGCAATAAACGAAGCGCTAGAA
AAACGCCCACTAAAAATTGAAACTAGGAATTTATTGAATATTTCACTAAT
GAAGTATCAAACTTTCTTTTTTGCAATTTAAATTCATCATAGTTTTAAAT
ACTATTTTTTGAAAGTCAAAGGACAATTAAAGTGAATTTAAGCTGATTGG
GTGGATATTGGGCGGACGGGCGTGTTCCAAGATTGGAAATTAGACAAGAG
TAAAAAACGGGGGCGCCTTAGTATGTAATATTAATTCTTTTTTTATTTTT
CGTGAATGCAAAATGAATTTTTGATTTTTGAATTGAGGAAATATAATGTG
ATATATTATAATTGTCAATGCCAAAAGATATTTTCTTTAGTTTACGAATA
TTCTGCTGTGTTGCTTTGCCACTTACCTACCCCCGGATTGTTTTAGTAGG
CACTTCGGTCACGTGAATAAAAACACGCGTATATGTTGAACCCGACTGTG
GACTGACCGAAACTGCAATGACATAAATTATTGTGGAAGTGAACGCTTAA
GACAAATGTTTGGGAAATCAAAAAGACAACTTTTGTAAGGATGTTGAGTT
TTGTTTATATGGCACATTGTGATGGGCTGTTGAATAAAAGAAGAACTTTA
ACTCTTTAATATTTTCATTTTGAAGAATTGGTGCAAAAAAGTGAAACATG
GAAAAGTTTCATTTTTTAATGGTTCAATTGAAATAGGGGATTTGGAAAAN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTT
GGAAAATTTTTTTTTTTTTTTTTTTTTTTTTTGCACAAACCCAACTATGG
GTTAGCACCCTGTTGCTAAGATGTTGGCTTGAAATCGAAAGTGAAACCAC
TGAAAACGAAAGTAAAATCGACCGCACTCCAAATCCTGTAATCCTGATAT
AGGAGTTTAAGTATAGACTGTCGAACAATCGAACTAATTGAATTTCATCG
TACTAATTGAACGATAGCTGTTTGATTACCAATCCCGGTAAAGTTCGATT
GTGTTTGATAACTGTTCGATGCGTTGGATTTCAATTCCGTAGACCTCAAC
CACCACTCGTTCTCAGGGTGGCCACAAATGCGCCATCAGGGTGGGGCAGA
AGTAGTTGGCGCCCGCCCCGTAAAACAAACAGCCAGTCAGTGGAAGAACC
TCAATTTAAAGCATGTTCAAAGGTCACAATAATGACTTTCTTTTTATTAC
GGCAACCAAACAAGTGAGAGCAAGTCATTAAAACTAAAAGTCAGCACTCC
GTGGTTGTGATGTAAGTTTTGTAATCGATTTTCACAGTTTCTTTTTTCTA
CAGCATTTTTTAAACCTCTTTACTGTAGTAGGAGAACGTGTCATTCAATA
AGGAATTTTATAACATTTCATGGCAGATTAAAAAGACAATTACAGTAGAA
AATAAAAGTTTCTTCGTTTTTCATTTTCGCATTTATGGGGAAGAATGAAA
TTTTCAGAAGGTGCTTTATTCGATATGAGGATTCCCATTTCCGTAAAATT
GCGATTCCCCATGGTTGCGAAATGATAGCTGTGGGTAATTCCTTTGTTCT
TTTGCTATTTTCTTTTGTTCTGTGTGACGTAAAGACGCTTCGCAAATCGA
AGTACAATTATATATATTGTTATTGGAACTATAATCGAACAGTAATTTCC
GGTAAAGTCCGATTACTGTTCGATTTGGTTCATTAATCGAACAGTTATCG
TTTGATTAGTTCGATGAAATTCAATTGTTGTATTACAAAAATAGGTTCTA
TAACATTGTTGACATCGTCTGAAGCTATGTGTGTCTTCAAAAATTCAGAT
TTTTAATGCTGATTTCACTTTTGAGAAAAGCTTTGAAGAAAAATTACTTT
CAGTAAGTAGATGTGTCTTAAAGAGTCGACTATCGATTGTAGATATATAT
ACTGTAAGTTGGTCTAATTTTGANTTAAAGAGTGGACTATCGATTGTAGA
TATATATACTGTAAGTTGGTCTAATTTTGACATCCCTCTTCTAATTTCGA
CACCCTCTTCTTTAGAGATACCAGACCCGATCAATCAAGCTTGTCAAACT
AATCCAACAATCAAACTAATCAAACTCCATCAAACGATTAAAGTTTGATT
AATAAAATTAATTGAACCTAATCAAACACTCACAATTTCAGAAGCAATGA
GTTCAATTAGTTTGCTCGGTCAGTAAAAAGTTCAATTACTAGTTCGATGA
TATTAAATCCTTGTATCTTCCCTCACTTGCAAAAACTTTACTGTGGCACG
CGATCACCATTTTGCCCTTTGTTGCGATTTTGCCTGCGGCCACGAAATAC
TACGCTCCAATAAACTGCTCCAATAAACCGTCTCTGTCTGGTGTTTAAAG
GATACAAGAAAAGTGTGTAATCAGATATAGGAAGTAATTTCCCAATTTAC
ATTTCGAATTTAGCATTGAGAAGAAGCTAATATATGGTGGTGGAGCGGCA
CAAACTTGTCGAACAAAATTGGGTTATCGAACTGATCAAACCGCAATCTA
TTGATCAAACTTTAAAATCGAATACTCACATTTTTTTTTAAATCTTAGAG
TTCGATTAATTTTTTTAAAGGAACTTAATTGTTTGATGAAGTTCGATTAG
TTTGATTGTTTGATTGGTTCAACAAGTTCAATTGATGAGGTCTGGGAGAT
AGGAATAAAATTTGAAGGTCAAAATTGCTGATGGAAAACTATTTTTGTAA
AGCTATCAGGGAGGAAAGTTTCTTTTGTTTATTAGTGATCCAGACCTTCC
TATATATTATTCCAATCTCAAAAAAGGATGCCGAAATCAGAAGGCAAAAG
GGATGTTGACATTACAGTAGTTTAGAGGGTTTCCACCAGTTTCCACAGCG
ACTAGTAGCTAGTTTTTTTGGTATAGCTAGACCTTTTATTAAGTTGAAGT
TGGTTTGATATTCTACGTTGACCTTTGATATTCTCAAATTTGCTTTTTGA
AGTTCCTGTGATTACTTTTAGAATTGGAAACTATTGGAAGCCAATAGAGT
TTATTCTCAAGGGTGTGTGTGCCAAATTTCAGTGCTCTCCGTCGCAGTGT
GCTTCCTCTAAATATTTGTAACCGTCAAACCTCATTTCGGCCAAAATGAC
AAGTTGGGCTCTTGTGGGGGAGAGCAGTTATTTTTTGAATTTGAAACTAT
TGGAAGGCCAATAGAGTTATTCTCAAGGGTCTCTATGCCAAATTTCAGCG
CTCTCCATCGCAATCTGCTCTTCTCTAAAAATTTGTAACCGTCAAACCTC
ATTTCTGCCAAAATGCGCTGAAATTTCTCTCAGAGCACAACGTCCCTTAG
AATAGGAATAAAAATCATTAGAGTCATTGCTGCTATTTTTTGGATTCAAA
ATGGTATTGTATCCTACTACGTTGGCAAGTCAGCTTTGAATAGACCTTTT
GAGTTTGTGTAAAGCGAAACTATTTTAAATTAAAAAATTTTATTCAAAAT
GATAATTGCATCCTGAAAAGGTAGATTATTTCTTTAGATGAGCACTGAGC
AATCTTGCTTTCAAGCTAGATATTTTGTTAAGAAATTCGGAATGAATAAC
TACCACGGCAGGTTATATTTAGATAAAAATCCGGTTTAGTGTTATATATT
TTATTTGAGAAGCTAATGGGTCAGCTATATGCACATGTGGATACACTACT
TTGCTGCCATTATGTTTCCTCTTTTCTTCACATACACGAGGGCTTCAACA
TTACAATTCTTGCATTTGCTAAAAAGAACAACAAATCTAAAAAAGAAATA
CACATTACAGCCTCCACACCCCATAGTAAATGATTCTACTTTGTTTAATG
AGAAGATTGCGCCTTATGGTTAAAAGGATGACAAATTAGACATGCATGTT
ATTGTTATTAATGCAGGAATAGTAAGACACACTCACTGACATTATAATAA
TGTTGTTACAAGCAAAATAATGAACAAAAAAAGTAAAATCTACGTTTTTT
AAAGATGCTTGGTTCTCTTTCATGACTCAGATAGTCTTTCTTTGAGTTAT
ATACTTTTAAGTTTTTCTTTGGTATCCCTAAATGTTTTTTAAATATAAGT
CGACCATAATTTAGAAATTAAAATTATACTATAAGATATTCTTATATTTT
ATCTTATACTGCTTTGTGTTATTACTTTTCTTGAGTTTTATTCTCAGTAA
TTTGAACTGCAAAAACAACCCACTGACAAACATTACTTTACTGAAGTTTT
AGAACATAACATAGAACTATCATGGTAATAATAATAACAAATAGACTAGC
AATACTAAAATGCTTTACAATTCACAATACAATTGACGTAAACTGATACA
CATGAGACATTAAGTAATATTAATTAAGTGACAATTATAAACGTTATACA
TACAAAATTCCCTNTTATATACTTTTAAGTTTTTCTTTGGTAACCCTAAA
TGTTTTTTAAATATAAGTCGACCATAATTTAGAAATTAAAATTATACTAT
AAGATATTCTTATATTTTATCTTATACTGCTTTGTGTTATTACTTTTCTT
GAGTTTTATTCTCAGTAATTTGAACTGCAAAAACAACCCACTGACAAACA
TTACTTTACTGAAGTTTTAGAACATAACATAGAACTATCATGGTAATAAC
AATAACAAATAGACTAGCAATACTAAAATGCTTTACAATTCACAATACAA
TTGACGTAAACTAATACACATGAGACATTAAGTAATATTAATTAAGTGAC
AATTATAAACGTTTTACATACAAAAATCTAAATGGATTTACAAAAAAACG
CTACAGAACAAAAGATAAATCAAATAAACTTAAAATTAAGAGCCTGACTG
GCACTAACAGTAACTCTAATCTTCTTTTCTAGAACAAAATAAAGACAATT
ACCACAAAAACAACAACAAGCCTACAATATGGAGGATCTTATAGATCCAG
AATCCCTGCATTCAAAGACTGGATTCAAAACAATACAACTTATTGGTCGT
TTGGTTATTATTTTGATTATACGCTTTTGGAAAGCATGTAGTATTGGCTT
ATTATTAGTTTTTCTTTTGTTTTGGTTGTATGGGGGTATAGCAACAATGT
TATTGTTAACTTGCGCTTTTGTTGGTGCTTTTTATCATTATCAAGATGCG
TTATTATATTTTCCTGATCAACCAGAAAATTCACGGATATATGTGCAATC
GCCAAGACTTCTAGGAGTCCCTTATGAAAATTTACATATTCAAACTCGTG
ATAGTGTATCGCTAAATGCAATATTTTTGAAGCAACCAAGTAATAGACTA
TCAATAGCACCAACTATAGTTATGTACCACGGTAATGCAGGAAACATTGG
GCATCGGTTATCAAATGCTTTCCTGTTGTATACATATACTGGGAGTAATG
TTTTTTTACTGGAATACCGCGGTTATGGGAAAAGTGAAGGATCGCCCAGT
GAAAAAGGTATTGCTTATGGATGAGTTAGATTTTCCATTTTAAATTCTTT
CCTCAGATGTCTTTTATCAAATTCATTTGAGTATGTGGGGACTTCCTATT
GTTTTAGGGTTAACCTATTAAGAATTCATATGAAACTAGCAATAATTTCT
TTTTGGTTTCCTGAGTGTTTTCCAATATTTTGTATTGATAGATGCTAAAT
AACATTTTGATAAACATATTTTCTGTTTTTTTTTTAGGTTTTGAATTAGA
TGGTGTTGCATCATTAGAGTATTTGTTAAGCAGGCCAGACATTGACCATC
AGAAGTTGATTTTGTATGGTAGATCTCTTGGTGGTGCTGTAGCTTTTAAT
ATTGCTGCCTTAGAACAATATACCAATTTCCTTTTTGCGGTGATTGTTGA
AAATACTTTTACAAGCATCCCAGAAATTTCGAAATATCTTTTCAAATATT
TGAAGGGGCTTCCTGAATGGTGTTATAAGAATAAGGTATGTTTTTCTACT
TGCTTAAAAGCTACTTGGTATGACTGTTAATTATTAATCTACACGAAGGA
CCAGAAATTTTGTTACTGATGCCATTATTCAATTATCAAAGCTAAATTTT
TGTCTTGTTCACTGAGCCTATTGTTTATATCACCGATATATCATCGATTG
TTTTTATCTTCTTGTTTTCAGTTTCTATCAATAAACCGAGTAAGGCTTAT
AACGACACCAACTTTATTCCTTTCTGGATTATCTGATCAATTGGTCCCTC
CAAATCACATGCTCAAACTTTATAATGTAAGAGATGAATACTAAATTAAA
GCCTTATTTTCATTTTAACACTCTAAAAACCCATCTCTACTCTTAATTTA
TATTCTACTTTTAAATATTTCGTCCGTAAAAAGGAGACTCGATTATTCGA
CTGTTTAACACTTAACCAAAGTCAAAAGTCTATTGCCTCTGAAAACCTCT
ACTCAAGCAGCTCCTCGTTGAATAAATAAAGATGAAGCAACACTAGAACT
CCTGAAGTTTTCACTTTCCTCAAAAGAAATTCTCTAGTTCTTTAGTCCTA
TCCTATAAAAGCACTTGCTTATAGAGCACCCTCTTTTCTCGTGTCTAGGC
CCTTTGAGATAAACCACCAAGTCTTCCTCCAATATAGCATGCAAGTTCAT
GAATGGGGCCATTCTATTTTATATCCATACAGGGGAATGGACGAACATTT
CCAGGGTAACTTGAGCAGAACTTCCAGGGTGTCTAAAAGAATGTTTTTTT
CATTTTTCCAGGGGTGANCTTGAGCAGAACTTCCAGGGTGTCTAAAAGAA
TGTTTTTTCATTTTTCCAGGGGTGGTAAAAGATAGTTTTGCAATTTTGAG
GGGGTAAATAAGGCTCATTTTAGTTCGTCCACCGTCACTTTAAGGTACAA
AATGAAATTTTTTAAGGGTCTTTTTGCAAATTTTGCCATCTTCCAGAGGG
GTACCCACGCATTTCCAAGAAATATTTTTTGACTTGAAAAAGGTTTGTGT
GGAAATTTAATGGAATGGCCCAATGTTTTCTTCTCATTAAAAGTTTAATT
TTCATTTTAGACGTCAGAGTCTGACATGAAGCGAATGGAAACCTTTGAGT
CAGGTACACACAATGAAACATGGCAATGTCAAGGTTATACTGAAGCTATC
AACAGGTTTCTAAATGATGTAAGTTCGTTGATATATTCGGCTTTTTATCG
ATAGATAGAGTTAAATTTCTTTTGAATGAACACAAAGAATAATTATAATA
GGAACCTTTATGCTAATCATAGAGATTATATCACGGACTTGGTCAAGGGA
CTTATCACCCAGTAATATCTTTCAATATCTAAAACTCTCAATCTCATTTA
AGAGGTTTACAGAGATGTCATAGAGATTATATCACTGACTTGGTCAAGGA
ACGTTTCACCCAGTAATATCTTCCAATGTCCATTTCAACAGGTTTACAGT
GCGCACCAAGAAGGTCGTCTACCACGAACAGAAAAGAAGAGAAGGAAAAC
CAATGACCTTATAGATATCTGAAGAATGGAATATTGTGGTGAAGTCTTTA
TTCAGTATTAGCTTATTCACAGTGTTGCAACTTTTCTGTCTGTCGACAGA
AATCTGCTCAGTTGAGATGCAAACACGCGATTTCCGTCTTACTAGTAAGA
GAGCTTTGGTCAACACCACAAAATAATTATGATTTTCGTTCAAATTCATA
AAACCTAGTTGCAACACTAGTATTTAGTATTCTTCTAAAAACAACGACCT
TATCTATGATACTCCGATGAGTTGAAGATGCAACAAGAAATCTCATGATC
CATAGTATATTAGAGTGCCTTTTTTTGAGATAAGCACCAGCATCATGAAC
TGGTTTACCTTTATTGAAATAAGAGAAAAGTAACCTTGTTGATATCTGAA
AGATGATTTCTAAAGGTCATTTTTTCAACTGTAAATGGTGGTCCCGGATG
ACTTTGGTGTATAATTTTTCTTTTTGAAAGAATTTTGGCATTGGGGTGTT
TAGAGAAAATGCATTTTACTGTAAAATCATGTCCAGTCCACTAACCTTTA
TATACCCTGGACCAAGTTTTTCAATCCCGGCCAAGTAAAATCTTTGATTG
GAGTTTTCTGAAAAGTGGATATTTCATTTGTAATGCTATTGAACCTTAAA
AAGTTCAACATAAACAAGAATTTTTATGCAACCTTTTTTGCTCTTGATTG
ATTTCAGATAGAATCTTTAAAGCCAGATTTTGTGGTCCATATGTTTCGTA
TTTATATTGGCAGGGTCCATTTTGTTTTGAAGGGTATATTTAGCCTTGGT
AAAAATTGGTAGGATCACATAAAGCACATTTATATCAAAGGTGTAGATAT
TTATCAAAATGAATTTTAGTATTTTTCTGTTTTTGAATTATCACAAATGT
TTTTTATGTACTAATTATTGTAAGTATATTATTTGAACGTTTTTCTAAAA
AAAAACAATGGGAAAATTATGGTAATATTTTCTAAAGATCTCTTCACCCT
TTGGAAGTTCC Coding sequence (CDS) from alignment at scaffold_298:336656..347866- >TCONS_00057790 ID=TCONS_00057790|Name=TCONS_00057790|organism=Clytia hemisphaerica|type=CDS|length=5355bp|location=Sequence derived from alignment at scaffold_298:336656..347866- (Clytia hemisphaerica) GTTTACAGTGCGCACCAAGAAGGTCGTCTACCACGAACAGAAAAGAAGAG AAGGAAAACCAATGACCTTATAGATATCTGAACGTCAGAGTCTGACATGA AGCGAATGGAAACCTTTGAGTCAGGTACACACAATGAAACATGGCAATGT CAAGGTTATACTGAAGCTATCAACAGGTTTCTAAATGATTTTCTATCAAT AAACCGAGTAAGGCTTATAACGACACCAACTTTATTCCTTTCTGGATTAT CTGATCAATTGGTCCCTCCAAATCACATGCTCAAACTTTATAATGTTTTG AATTAGATGGTGTTGCATCATTAGAGTATTTGTTAAGCAGGCCAGACATT GACCATCAGAAGTTGATTTTGTATGGTAGATCTCTTGGTGGTGCTGTAGC TTTTAATATTGCTGCCTTAGAACAATATACCAATTTCCTTTTTGCGGTGA TTGTTGAAAATACTTTTACAAGCATCCCAGAAATTTCGAAATATCTTTTC AAATATTTGAAGGGGCTTCCTGAATGGTGTTATAAGAATAAGATGGAGGA TCTTATAGATCCAGAATCCCTGCATTCAAAGACTGGATTCAAAACAATAC AACTTATTGGTCGTTTGGTTATTATTTTGATTATACGCTTTTGGAAAGCA TGTAGTATTGGCTTATTATTAGTTTTTCTTTTGTTTTGGTTGTATGGGGG TATAGCAACAATGTTATTGTTAACTTGCGCTTTTGTTGGTGCTTTTTATC ATTATCAAGATGCGTTATTATATTTTCCTGATCAACCAGAAAATTCACGG ATATATGTGCAATCGCCAAGACTTCTAGGAGTCCCTTATGAAAATTTACA TATTCAAACTCGTGATAGTGTATCGCTAAATGCAATATTTTTGAAGCAAC CAAGTAATAGACTATCAATAGCACCAACTATAGTTATGTACCACGGTAAT GCAGGAAACATTGGGCATCGGTTATCAAATGCTTTCCTGTTGTATACATA TACTGGGAGTAATGTTTTTTTACTGGAATACCGCGGTTATGGGAAAAGTG AAGGATCGCCCAGTGAAAAAGGTTTACAGTGCGCACCAAGAAGGTCGTCT ACCACGAACAGAAAAGAAGAGAAGGAAAACCAATGACCTTATAGATATCT GAACGTCAGAGTCTGACATGAAGCGAATGGAAACCTTTGAGTCAGGTACA CACAATGAAACATGGCAATGTCAAGGTTATACTGAAGCTATCAACAGGTT TCTAAATGATTTTCTATCAATAAACCGAGTAAGGCTTATAACGACACCAA CTTTATTCCTTTCTGGATTATCTGATCAATTGGTCCCTCCAAATCACATG CTCAAACTTTATAATGTTTTGAATTAGATGGTGTTGCATCATTAGAGTAT TTGTTAAGCAGGCCAGACATTGACCATCAGAAGTTGATTTTGTATGGTAG ATCTCTTGGTGGTGCTGTAGCTTTTAATATTGCTGCCTTAGAACAATATA CCAATTTCCTTTTTGCGGTGATTGTTGAAAATACTTTTACAAGCATCCCA GAAATTTCGAAATATCTTTTCAAATATTTGAAGGGGCTTCCTGAATGGTG TTATAAGAATAAGATGGAGGATCTTATAGATCCAGAATCCCTGCATTCAA AGACTGGATTCAAAACAATACAACTTATTGGTCGTTTGGTTATTATTTTG ATTATACGCTTTTGGAAAGCATGTAGTATTGGCTTATTATTAGTTTTTCT TTTGTTTTGGTTGTATGGGGGTATAGCAACAATGTTATTGTTAACTTGCG CTTTTGTTGGTGCTTTTTATCATTATCAAGATGCGTTATTATATTTTCCT GATCAACCAGAAAATTCACGGATATATGTGCAATCGCCAAGACTTCTAGG AGTCCCTTATGAAAATTTACATATTCAAACTCGTGATAGTGTATCGCTAA ATGCAATATTTTTGAAGCAACCAAGTAATAGACTATCAATAGCACCAACT ATAGTTATGTACCACGGTAATGCAGGAAACATTGGGCATCGGTTATCAAA TGCTTTCCTGTTGTATACATATACTGGGAGTAATGTTTTTTTACTGGAAT ACCGCGGTTATGGGAAAAGTGAAGGATCGCCCAGTGAAAAAGGTTTACAG TGCGCACCAAGAAGGTCGTCTACCACGAACAGAAAAGAAGAGAAGGAAAA CCAATGACCTTATAGATATCTGAACGTCAGAGTCTGACATGAAGCGAATG GAAACCTTTGAGTCAGGTACACACAATGAAACATGGCAATGTCAAGGTTA TACTGAAGCTATCAACAGGTTTCTAAATGATTTTCTATCAATAAACCGAG TAAGGCTTATAACGACACCAACTTTATTCCTTTCTGGATTATCTGATCAA TTGGTCCCTCCAAATCACATGCTCAAACTTTATAATGTTTTGAATTAGAT GGTGTTGCATCATTAGAGTATTTGTTAAGCAGGCCAGACATTGACCATCA GAAGTTGATTTTGTATGGTAGATCTCTTGGTGGTGCTGTAGCTTTTAATA TTGCTGCCTTAGAACAATATACCAATTTCCTTTTTGCGGTGATTGTTGAA AATACTTTTACAAGCATCCCAGAAATTTCGAAATATCTTTTCAAATATTT GAAGGGGCTTCCTGAATGGTGTTATAAGAATAAGATGGAGGATCTTATAG ATCCAGAATCCCTGCATTCAAAGACTGGATTCAAAACAATACAACTTATT GGTCGTTTGGTTATTATTTTGATTATACGCTTTTGGAAAGCATGTAGTAT TGGCTTATTATTAGTTTTTCTTTTGTTTTGGTTGTATGGGGGTATAGCAA CAATGTTATTGTTAACTTGCGCTTTTGTTGGTGCTTTTTATCATTATCAA GATGCGTTATTATATTTTCCTGATCAACCAGAAAATTCACGGATATATGT GCAATCGCCAAGACTTCTAGGAGTCCCTTATGAAAATTTACATATTCAAA CTCGTGATAGTGTATCGCTAAATGCAATATTTTTGAAGCAACCAAGTAAT AGACTATCAATAGCACCAACTATAGTTATGTACCACGGTAATGCAGGAAA CATTGGGCATCGGTTATCAAATGCTTTCCTGTTGTATACATATACTGGGA GTAATGTTTTTTTACTGGAATACCGCGGTTATGGGAAAAGTGAAGGATCG CCCAGTGAAAAAGGTTTACAGTGCGCACCAAGAAGGTCGTCTACCACGAA CAGAAAAGAAGAGAAGGAAAACCAATGACCTTATAGATATCTGAACGTCA GAGTCTGACATGAAGCGAATGGAAACCTTTGAGTCAGGTACACACAATGA AACATGGCAATGTCAAGGTTATACTGAAGCTATCAACAGGTTTCTAAATG ATTTTCTATCAATAAACCGAGTAAGGCTTATAACGACACCAACTTTATTC CTTTCTGGATTATCTGATCAATTGGTCCCTCCAAATCACATGCTCAAACT TTATAATGTTTTGAATTAGATGGTGTTGCATCATTAGAGTATTTGTTAAG CAGGCCAGACATTGACCATCAGAAGTTGATTTTGTATGGTAGATCTCTTG GTGGTGCTGTAGCTTTTAATATTGCTGCCTTAGAACAATATACCAATTTC CTTTTTGCGGTGATTGTTGAAAATACTTTTACAAGCATCCCAGAAATTTC GAAATATCTTTTCAAATATTTGAAGGGGCTTCCTGAATGGTGTTATAAGA ATAAGATGGAGGATCTTATAGATCCAGAATCCCTGCATTCAAAGACTGGA TTCAAAACAATACAACTTATTGGTCGTTTGGTTATTATTTTGATTATACG CTTTTGGAAAGCATGTAGTATTGGCTTATTATTAGTTTTTCTTTTGTTTT GGTTGTATGGGGGTATAGCAACAATGTTATTGTTAACTTGCGCTTTTGTT GGTGCTTTTTATCATTATCAAGATGCGTTATTATATTTTCCTGATCAACC AGAAAATTCACGGATATATGTGCAATCGCCAAGACTTCTAGGAGTCCCTT ATGAAAATTTACATATTCAAACTCGTGATAGTGTATCGCTAAATGCAATA TTTTTGAAGCAACCAAGTAATAGACTATCAATAGCACCAACTATAGTTAT GTACCACGGTAATGCAGGAAACATTGGGCATCGGTTATCAAATGCTTTCC TGTTGTATACATATACTGGGAGTAATGTTTTTTTACTGGAATACCGCGGT TATGGGAAAAGTGAAGGATCGCCCAGTGAAAAAGGTTTACAGTGCGCACC AAGAAGGTCGTCTACCACGAACAGAAAAGAAGAGAAGGAAAACCAATGAC CTTATAGATATCTGAACGTCAGAGTCTGACATGAAGCGAATGGAAACCTT TGAGTCAGGTACACACAATGAAACATGGCAATGTCAAGGTTATACTGAAG CTATCAACAGGTTTCTAAATGATTTTCTATCAATAAACCGAGTAAGGCTT ATAACGACACCAACTTTATTCCTTTCTGGATTATCTGATCAATTGGTCCC TCCAAATCACATGCTCAAACTTTATAATGTTTTGAATTAGATGGTGTTGC ATCATTAGAGTATTTGTTAAGCAGGCCAGACATTGACCATCAGAAGTTGA TTTTGTATGGTAGATCTCTTGGTGGTGCTGTAGCTTTTAATATTGCTGCC TTAGAACAATATACCAATTTCCTTTTTGCGGTGATTGTTGAAAATACTTT TACAAGCATCCCAGAAATTTCGAAATATCTTTTCAAATATTTGAAGGGGC TTCCTGAATGGTGTTATAAGAATAAGATGGAGGATCTTATAGATCCAGAA TCCCTGCATTCAAAGACTGGATTCAAAACAATACAACTTATTGGTCGTTT GGTTATTATTTTGATTATACGCTTTTGGAAAGCATGTAGTATTGGCTTAT TATTAGTTTTTCTTTTGTTTTGGTTGTATGGGGGTATAGCAACAATGTTA TTGTTAACTTGCGCTTTTGTTGGTGCTTTTTATCATTATCAAGATGCGTT ATTATATTTTCCTGATCAACCAGAAAATTCACGGATATATGTGCAATCGC CAAGACTTCTAGGAGTCCCTTATGAAAATTTACATATTCAAACTCGTGAT AGTGTATCGCTAAATGCAATATTTTTGAAGCAACCAAGTAATAGACTATC AATAGCACCAACTATAGTTATGTACCACGGTAATGCAGGAAACATTGGGC ATCGGTTATCAAATGCTTTCCTGTTGTATACATATACTGGGAGTAATGTT TTTTTACTGGAATACCGCGGTTATGGGAAAAGTGAAGGATCGCCCAGTGA AAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00057790-exon-scaffold_298-1575043694:347829..347866 | TCONS_00057790-exon-scaffold_298-1575043694:347829..347866 | Clytia hemisphaerica | exon |
TCONS_00057790-exon-scaffold_298-1575043694:339660..340234 | TCONS_00057790-exon-scaffold_298-1575043694:339660..340234 | Clytia hemisphaerica | exon |
TCONS_00057790-exon-scaffold_298-1575043694:339182..339429 | TCONS_00057790-exon-scaffold_298-1575043694:339182..339429 | Clytia hemisphaerica | exon |
TCONS_00057790-exon-scaffold_298-1575043694:338891..338995 | TCONS_00057790-exon-scaffold_298-1575043694:338891..338995 | Clytia hemisphaerica | exon |
TCONS_00057790-exon-scaffold_298-1575043694:337999..338106 | TCONS_00057790-exon-scaffold_298-1575043694:337999..338106 | Clytia hemisphaerica | exon |
TCONS_00057790-exon-scaffold_298-1575043694:336656..337725 | TCONS_00057790-exon-scaffold_298-1575043694:336656..337725 | Clytia hemisphaerica | exon |
TCONS_00057790-exon-scaffold_298-1510915933:347829..347866 | TCONS_00057790-exon-scaffold_298-1510915933:347829..347866 | Clytia hemisphaerica | exon |
TCONS_00057790-exon-scaffold_298-1510915933:339660..340234 | TCONS_00057790-exon-scaffold_298-1510915933:339660..340234 | Clytia hemisphaerica | exon |
TCONS_00057790-exon-scaffold_298-1510915933:339182..339429 | TCONS_00057790-exon-scaffold_298-1510915933:339182..339429 | Clytia hemisphaerica | exon |
TCONS_00057790-exon-scaffold_298-1510915933:338891..338995 | TCONS_00057790-exon-scaffold_298-1510915933:338891..338995 | Clytia hemisphaerica | exon |
TCONS_00057790-exon-scaffold_298-1510915933:337999..338106 | TCONS_00057790-exon-scaffold_298-1510915933:337999..338106 | Clytia hemisphaerica | exon |
TCONS_00057790-exon-scaffold_298-1510915933:336656..337725 | TCONS_00057790-exon-scaffold_298-1510915933:336656..337725 | Clytia hemisphaerica | exon |
TCONS_00057790-exon-scaffold_298-1491911889:347829..347866 | TCONS_00057790-exon-scaffold_298-1491911889:347829..347866 | Clytia hemisphaerica | exon |
TCONS_00057790-exon-scaffold_298-1491911889:339660..340234 | TCONS_00057790-exon-scaffold_298-1491911889:339660..340234 | Clytia hemisphaerica | exon |
TCONS_00057790-exon-scaffold_298-1491911889:339182..339429 | TCONS_00057790-exon-scaffold_298-1491911889:339182..339429 | Clytia hemisphaerica | exon |
TCONS_00057790-exon-scaffold_298-1491911889:338891..338995 | TCONS_00057790-exon-scaffold_298-1491911889:338891..338995 | Clytia hemisphaerica | exon |
TCONS_00057790-exon-scaffold_298-1491911889:337999..338106 | TCONS_00057790-exon-scaffold_298-1491911889:337999..338106 | Clytia hemisphaerica | exon |
TCONS_00057790-exon-scaffold_298-1491911889:336656..337725 | TCONS_00057790-exon-scaffold_298-1491911889:336656..337725 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_298 | supercontig | scaffold_298:336656..347866 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
Term | Definition |
GO:0008236 | serine-type peptidase activity |
Vocabulary: Biological Process
Term | Definition |
GO:0006508 | proteolysis |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category |
Term Accession |
Term Name |
biological_process |
GO:0006508 |
proteolysis |
molecular_function |
GO:0008236 |
serine-type peptidase activity |
Blast
BLAST of TCONS_00057790 vs. Swiss-Prot (Human)
Match: ABHDD (Protein ABHD13 OS=Homo sapiens GN=ABHD13 PE=2 SV=1) HSP 1 Score: 282.722 bits (722), Expect = 6.940e-88 Identity = 136/280 (48.57%), Postives = 193/280 (68.93%), Query Frame = 1
Query: 280 GAFYHYQDALLYFPDQPENSRIYVQSPRLLGVPYENLHIQTRDSVSLNAIFLKQPSNRLSIAPTIVMYHGNAGNIGHRLSNAFLLYTYTGSNVFLLEYRGYGKSEGSPSEKGFELDGVASLEYLLSRPDIDHQKLILYGRSLGGAVAFNIAALEQYTNFLFAVIVENTFTSIPEISKYLFKY--LKGLPEWCYKNKFLSINRVRLITTPTLFLSGLSDQLVPPNHMLKLYNTSESDMKRMETFESGTHNETWQCQGYTEAINRFLNDVYSAHQEGRLPRT 1113
G Y +QD LLYFP+QP +SR+YV P G+P+EN+ I+T+D + LN I ++ + +PTI+ +HGNAGNIGHRL NA L+ N+ L++YRGYGKSEG SE+G LD A L+Y+++RPD+D K+ L+GRSLGGAVA ++A+ + ++ + A++VENTF SIP ++ LF + ++ LP WCYKNKFLS ++ P+LF+SGLSDQL+PP M +LY S S KR+ F GTHN+TWQCQGY A+ +F+ +V +H + +T
Sbjct: 55 GILYKFQDVLLYFPEQPSSSRLYVPMPT--GIPHENIFIRTKDGIRLNLILIRYTGDNSPYSPTIIYFHGNAGNIGHRLPNALLMLVNLKVNLLLVDYRGYGKSEGEASEEGLYLDSEAVLDYVMTRPDLDKTKIFLFGRSLGGAVAIHLAS--ENSHRISAIMVENTFLSIPHMASTLFSFFPMRYLPLWCYKNKFLSYRKISQCRMPSLFISGLSDQLIPPVMMKQLYELSPSRTKRLAIFPDGTHNDTWQCQGYFTALEQFIKEVVKSHSPEEMAKT 330
The following BLAST results are available for this feature:
|