Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00057850 ID=TCONS_00057850|Name=TCONS_00057850|organism=Clytia hemisphaerica|type=transcript|length=269bp GGAGTAATTTGTGTCTGATTATCCAAATTCAACTAAACTAGTAGGTAAac cattttcaacaaaattttaaagattaatTTTCTTTACCTTCTTTTTCAGG TGAAGTTTGGATTTTCCCATCTTCAACATCTACTGTTTCATTAAGAAAAG AAGagcaaaataaagaaacaggatGAAAGGATGCAACAGACAAAAGGATG CAACAGACAAAAGGTGATTTCAAAGTACGGTCATGGCTTTCTTCAACAAT CATTCTGTCTTCAACTTCC Run BLAST on NCBI transcript from alignment at scaffold_3:73467..73930- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00057850 ID=TCONS_00057850|Name=TCONS_00057850|organism=Clytia hemisphaerica|type=transcript|length=464bp|location=Sequence derived from alignment at scaffold_3:73467..73930- (Clytia hemisphaerica) GGAGTAATTTGTGTCTGATTATCCAAATTCAACTAAACTAGTAGGTAAAC
CATTTTCAACAAAATTTTAAAGATTAATTTTCTTTACCTTCTTTTTCAGG
TGAAGTTTGGATTTTCCCATCTTCAACATCTACTGTTTCATTAAGAAAAG
AAGAGCAAAATAAAGAAACAGGATGAAAGGATGCAACAGACAAAAGGATG
CAACAGACAAAAGGTTTAAAAATATTGTTTATATACTACTGGTTCAGACC
CAGAGCTCGGACTGAGGTTGGATAAATTCATCTTGATCCTTTGGGGAACC
TGAATATTTCGAATTACCAAATATATTAGACTCTTTTTACTAGCGTGAAC
GAGGACAGGCCACTACATTCTTTTTTGGAAATTGCTCATTACTTACCAAC
TTTATCAGGTGATTTCAAAGTACGGTCATGGCTTTCTTCAACAATCATTC
TGTCTTCAACTTCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00057850-exon-scaffold_3-1575043694:73718..73930 | TCONS_00057850-exon-scaffold_3-1575043694:73718..73930 | Clytia hemisphaerica | exon |
TCONS_00057850-exon-scaffold_3-1575043694:73467..73522 | TCONS_00057850-exon-scaffold_3-1575043694:73467..73522 | Clytia hemisphaerica | exon |
TCONS_00057850-exon-scaffold_3-1510915933:73718..73930 | TCONS_00057850-exon-scaffold_3-1510915933:73718..73930 | Clytia hemisphaerica | exon |
TCONS_00057850-exon-scaffold_3-1510915933:73467..73522 | TCONS_00057850-exon-scaffold_3-1510915933:73467..73522 | Clytia hemisphaerica | exon |
TCONS_00057850-exon-scaffold_3-1491911889:73718..73930 | TCONS_00057850-exon-scaffold_3-1491911889:73718..73930 | Clytia hemisphaerica | exon |
TCONS_00057850-exon-scaffold_3-1491911889:73467..73522 | TCONS_00057850-exon-scaffold_3-1491911889:73467..73522 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_3 | supercontig | scaffold_3:73467..73930 - |
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00057850 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 ( blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match Name | E-value | Identity | Description | |
back to top
|