|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00057879 ID=TCONS_00057879|Name=TCONS_00057879|organism=Clytia hemisphaerica|type=transcript|length=466bp
gttataGTTGAAGCactgagaaaagaaaaaatgtaataCTATAATGATAA
TAATACCAAGATGTCAAAACTCCAGCAAGTTTACAAGCGTAGAAAGACTT
TCTTACGGGTTGGTGAGCGATGGAATATTGAATTGGAACTTCAAATTTCT
TATATTGGAGGAAGTATATCTTGGTTTTCTGATAGCATGTTACAGGTGGT
CCAAGAAACAATAAAGGAACCCTGTTATGAAAGAGTTATTAGAGAATCTG
AAAAATGCACTGATTGTCTATATCGTAAGTTTTTTATGGCTTACACTTTG
GGACGAAAAATCTCTTTCTAGATATTTTTTCTTGTCATCAAACTTGGTAT
CTTTTTGAAACATTAGAATTTTGTGGATAATCCTGGGTAACCTTTTTAAA
TAGAAACTAGCCATATGCACAGCGTCGCACGTTGGGTGTCCGAATCAAGT
GAATCACTATACATCT Run BLAST on NCBI transcript from alignment at scaffold_300:25662..26526+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00057879 ID=TCONS_00057879|Name=TCONS_00057879|organism=Clytia hemisphaerica|type=transcript|length=865bp|location=Sequence derived from alignment at scaffold_300:25662..26526+ (Clytia hemisphaerica)
gttataGTTGAAGCactgagaaaagaaaaaatgtaataCTATAATGATAA
TAATACCAAGATGTCAAAACTCCAGCAAGTTTACAAGCGTAGAAAGACTT
TCTTACGGGTTTGAATTTCTTTTAATGACAtttcctttttgttttgtgaa
aaTAAGTTAGTATACAAACCAACCTGTAGTCCATTTTCTTTAAATGTTTT
CtaatctttattttgctttcattttttcaaaaaaagtttcgtTTCAATAT
ACTTTATAgtgatgaaaaataatttgagaacttttgaaaattttgaaaat
gaagattttaggCAATGTCACTTAAACAGTCAAAgatgtatttttcattt
tactttAGGTTGGTGAGCGATGGAATATTGAATTGGAACTTCAAATTTCT
TATATTGGAGGAAGTATATCTTGGTTTTCTGATAGCATGTTACAGGTAAA
GCCAGAACATTCAAACGctttttcaatttattcttcaatttctttttatt
tttgatctcagtattcctttttctttatcattaAACTATTAAACATAGTT
GGAAAGATCATAGCTTTTGAtgcttttttatttaatacaaCCAGGTGGTC
CAAGAAACAATAAAGGAACCCTGTTATGAAAGAGTTATTAGAGAATCTGA
AAAATGCACTGATTGTCTATATCGTAAGTTTTTTATGGCTTACACTTTGG
GACGAAAAATCTCTTTCTAGATATTTTTTCTTGTCATCAAACTTGGTATC
TTTTTGAAACATTAGAATTTTGTGGATAATCCTGGGTAACCTTTTTAAAT
AGAAACTAGCCATATGCACAGCGTCGCACGTTGGGTGTCCGAATCAAGTG
AATCACTATACATCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00057879-exon-scaffold_300-1491911889:25662..25769 | TCONS_00057879-exon-scaffold_300-1491911889:25662..25769 | Clytia hemisphaerica | exon |
| TCONS_00057879-exon-scaffold_300-1510915933:25662..25769 | TCONS_00057879-exon-scaffold_300-1510915933:25662..25769 | Clytia hemisphaerica | exon |
| TCONS_00057879-exon-scaffold_300-1575043694:25662..25769 | TCONS_00057879-exon-scaffold_300-1575043694:25662..25769 | Clytia hemisphaerica | exon |
| TCONS_00057879-exon-scaffold_300-1491911889:26020..26106 | TCONS_00057879-exon-scaffold_300-1491911889:26020..26106 | Clytia hemisphaerica | exon |
| TCONS_00057879-exon-scaffold_300-1510915933:26020..26106 | TCONS_00057879-exon-scaffold_300-1510915933:26020..26106 | Clytia hemisphaerica | exon |
| TCONS_00057879-exon-scaffold_300-1575043694:26020..26106 | TCONS_00057879-exon-scaffold_300-1575043694:26020..26106 | Clytia hemisphaerica | exon |
| TCONS_00057879-exon-scaffold_300-1491911889:26256..26526 | TCONS_00057879-exon-scaffold_300-1491911889:26256..26526 | Clytia hemisphaerica | exon |
| TCONS_00057879-exon-scaffold_300-1510915933:26256..26526 | TCONS_00057879-exon-scaffold_300-1510915933:26256..26526 | Clytia hemisphaerica | exon |
| TCONS_00057879-exon-scaffold_300-1575043694:26256..26526 | TCONS_00057879-exon-scaffold_300-1575043694:26256..26526 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_300 | supercontig | scaffold_300:25662..26526 + |
Blast
The following BLAST results are available for this feature:
|
