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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00057904 ID=TCONS_00057904|Name=TCONS_00057904|organism=Clytia hemisphaerica|type=transcript|length=1391bp
attttttcgaaaaaacgtgtttcgtgtgtatcaaattttgcgattgccga
cttctggaaaatcttcgcgtgtattaaatttcgcgattcactaaactagg
tattttcagaaagtgggaatataaagcaagaaaaagactgattttgcttg
aaacacaacgtttttgatgtaaaaatactaaaaaaatactaagaaaattt
ttttcgtgtgtatttaatttcgcgattttgtaattttgaaaaatttaaac
agtattaaatttcgcaaaaattgaccaaaaaactcgcgaaaataagtacc
cgcgaaaatttgtaacacgcgaaaatatataccaataaggtacgACGAGT
TGGAAAGACGTTTTTCAGATCGTTTTCAGATCGTTTAAAAAACCTTGTTG
TTCTTGTTTTACATTTCCCATAGAATATATTTATACTCTTTCATGGAATT
GCACTAATTTTTAataaaaggaaatttgaaaatatcaacCCACTTTTCAT
GGAACGAGACAGATGATGTGGAATTTTTTGGATACAACAATTTTGTTCTT
TTGGACACCACTTTTGCGTCGGTATTTCATGTACTCATAAACCTCGTTGG
TAGGATATAAAAGTTTTACCTCTCTTTAGGCCAGGGTAAGAAAATTTTGT
GCGAATTTTTGTCAGGGTATATAATTGAAAGTCCCCCTAAAAAGATATCT
TCCACCCAGGTATGTGctatacttaatgaccgctcccTAAGTTTGACATG
ATGGTCTAAAACAGCCTATGAAAATTAAGGAGAATAATACTAGCTCTAAC
AACACTACATTGCGAATCTGTGCGAATGTCCGTCTTCAAACTAGATTTCT
TAAAATCGAAAGTACAAAAAGTTTGTGTAAGTTCCATTTTTAATCATAAA
GTAATTACAGTATTACAAATTTCAGATTTACAAATACCAAAAATATAGAA
CTTGAATATAACGTCATGTTGtgcataaataaataaaataatttcaagtT
GTAGGacaattaaataatttttatcggaattatttttgtcaaattgaaAG
GAAAAGTGACTTTGTTGAAGTGGTAATTTCTAAtaagtttgttaaatttt
cttCCACTGTACTgctataaaaaagtttttaaatctcACAGTATGTCACA
AAATTCTTTTATCAaatcaccaaaataagttccacTTTAAAATTGGGGAA
TGGGCCTATTCATTATGAGTTCCTTCCTGTCTAAATTTCTacaatctttt
tataaaaaatactacagtttaaatagaaaaataatgttttgttttaaGAT
GACCGTATATGAAAATATTACaatttgtttttcatgtttGATGAAAGAGT
TTACAAAACAATTACAATTTACAAAGTGTTATATCAATCTC Run BLAST on NCBI transcript from alignment at scaffold_301:17212..18602 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00057904 ID=TCONS_00057904|Name=TCONS_00057904|organism=Clytia hemisphaerica|type=transcript|length=1391bp|location=Sequence derived from alignment at scaffold_301:17212..18602 (Clytia hemisphaerica)
GAGATTGATATAACACTTTGTAAATTGTAATTGTTTTGTAAACTCTTTCA
TCaaacatgaaaaacaaattGTAATATTTTCATATACGGTCATCttaaaa
caaaacattatttttctatttaaactgtagtattttttataaaaagattg
tAGAAATTTAGACAGGAAGGAACTCATAATGAATAGGCCCATTCCCCAAT
TTTAAAgtggaacttattttggtgattTGATAAAAGAATTTTGTGACATA
CTGTgagatttaaaaacttttttatagcAGTACAGTGGaagaaaatttaa
caaacttaTTAGAAATTACCACTTCAACAAAGTCACTTTTCCTttcaatt
tgacaaaaataattccgataaaaattatttaattgtCCTACAacttgaaa
ttattttatttatttatgcaCAACATGACGTTATATTCAAGTTCTATATT
TTTGGTATTTGTAAATCTGAAATTTGTAATACTGTAATTACTTTATGATT
AAAAATGGAACTTACACAAACTTTTTGTACTTTCGATTTTAAGAAATCTA
GTTTGAAGACGGACATTCGCACAGATTCGCAATGTAGTGTTGTTAGAGCT
AGTATTATTCTCCTTAATTTTCATAGGCTGTTTTAGACCATCATGTCAAA
CTTAgggagcggtcattaagtatagCACATACCTGGGTGGAAGATATCTT
TTTAGGGGGACTTTCAATTATATACCCTGACAAAAATTCGCACAAAATTT
TCTTACCCTGGCCTAAAGAGAGGTAAAACTTTTATATCCTACCAACGAGG
TTTATGAGTACATGAAATACCGACGCAAAAGTGGTGTCCAAAAGAACAAA
ATTGTTGTATCCAAAAAATTCCACATCATCTGTCTCGTTCCATGAAAAGT
GGgttgatattttcaaatttccttttatTAAAAATTAGTGCAATTCCATG
AAAGAGTATAAATATATTCTATGGGAAATGTAAAACAAGAACAACAAGGT
TTTTTAAACGATCTGAAAACGATCTGAAAAACGTCTTTCCAACTCGTcgt
accttattggtatatattttcgcgtgttacaaattttcgcgggtacttat
tttcgcgagttttttggtcaatttttgcgaaatttaatactgtttaaatt
tttcaaaattacaaaatcgcgaaattaaatacacacgaaaaaaattttct
tagtatttttttagtatttttacatcaaaaacgttgtgtttcaagcaaaa
tcagtctttttcttgctttatattcccactttctgaaaatacctagttta
gtgaatcgcgaaatttaatacacgcgaagattttccagaagtcggcaatc
gcaaaatttgatacacacgaaacacgttttttcgaaaaaat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00057904-exon-scaffold_301-1491911889:17212..18602 | TCONS_00057904-exon-scaffold_301-1491911889:17212..18602 | Clytia hemisphaerica | exon |
| TCONS_00057904-exon-scaffold_301-1510915933:17212..18602 | TCONS_00057904-exon-scaffold_301-1510915933:17212..18602 | Clytia hemisphaerica | exon |
| TCONS_00057904-exon-scaffold_301-1575043694:17212..18602 | TCONS_00057904-exon-scaffold_301-1575043694:17212..18602 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_301 | supercontig | scaffold_301:17212..18602 . |
Blast
The following BLAST results are available for this feature:
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