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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00057920 ID=TCONS_00057920|Name=TCONS_00057920|organism=Clytia hemisphaerica|type=transcript|length=1013bp
ATTTCGCGGATTTTCCCTATTTATTTTAAACACatctctttcatttttca
aggaaTTTTTCTAATTTGATTTTGCCTgcgaaaaaagcgaaaattagGGA
TATACCCGACATCGGCACATAAAAGGTTTTCTGTAATATCTTCATATGTA
AGCGGGTCTGAAGTTTAAGTTTTGTTTCGTGACTTAAACCTTTCGCTTAA
AATAGCCTGACTTGATCGGCTCCAGATGATGCGTTGTCCATTTATTAATA
CAGATTTGAACATTTTGTTATGGATTCGATTGAAAGTCATGTGGAACTAG
CCTCTGTCCAAGTACACGAAGGAAATAAACAATTGCAGCGGGCTAAAAAT
TATCAGaaaAGCGCGCGAAAAAGACTATGTTGTATATTGGGCGTGTCTTT
AGTGGCTGCAATAATATTAATTCTTATAATATATTATTCTGTAAAATAGC
TCATTAggatttcatttattttttaatttcacgATTCTTAGgattattta
aaattttctatctattttttttctcatttacgGGACCGATAGACTGGTAA
TCTAGGTAGTCTATAACACCGAGTTTAAAGCGAAGGGCGTGGAGATGAAA
CtctgggaaatgaagccacctATTTCCCATCCGAATCACGTGACTAAAAG
TAGCGCAAATCCAAGGGATTCAAGTTTTCTTGTTTgagaaagattgaaaa
tttcattaaagcCTCTCGGActtcagaaaatcttttatgATTTATGTTTG
AATAAATCAGCTAGTCCTGGTCAATTTGAACAATTCATTTACGGGGTAGA
AGtgggaataaatatttttcttacaccgttattaattttgtaaatttgtt
ataaatttataaataaaaagaaaattcttatttttatcGTATATAAGTGA
TAACTggtcaattttaattcatagGTAAATTAGCTTTCCCCATACCAATT
AAAAATTTagtcaaaatataaaaagttgTTCCAAGACGAAGATTCATATC
AGAATTTCATGAC Run BLAST on NCBI transcript from alignment at scaffold_302:182073..183255+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00057920 ID=TCONS_00057920|Name=TCONS_00057920|organism=Clytia hemisphaerica|type=transcript|length=1183bp|location=Sequence derived from alignment at scaffold_302:182073..183255+ (Clytia hemisphaerica)
ATTTCGCGGATTTTCCCTATTTATTTTAAACACatctctttcatttttca
aggaaTTTTTCTAATTTGATTTTGCCTgcgaaaaaagcgaaaattagGGA
TATACCCGACATCGGCACATAAAAGGTTTTCTGTAATATCTTCATATGTA
AGCGGGTCTGAAGTTTAAGTTTTGTTTCGTGACTTAAACCTTTCGCTTAA
AATAGCCTGACTTGATCGGCTCCAGATGATGCGTTGTCCATTTATTAATA
CAGATTTGAACATTTTGTTATGGATTCGATTGAAAGTCATGTGGAACTAG
CCTCTGTCCAAGTACACGAAGGAAATAAACAATTGCAGCGGGCTAAAAAT
TATCAGGTAAGCTATACACCAGACTCCCATACAGTTCGTTAAGCCCAGAT
CTGAAGTGTAAGCTCTCTCCAGCAAAGTAACTTCATGCCGGTGGATTAAA
TCTAGTATTTATGTTGCCTTCAGCTTCAATGAAAAACTTTGCATCAACTT
GAccgaaatcttttttttttgtttagaaaAGCGCGCGAAAAAGACTATGT
TGTATATTGGGCGTGTCTTTAGTGGCTGCAATAATATTAATTCTTATAAT
ATATTATTCTGTAAAATAGCTCATTAggatttcatttattttttaatttc
acgATTCTTAGgattatttaaaattttctatctattttttttctcattta
cgGGACCGATAGACTGGTAATCTAGGTAGTCTATAACACCGAGTTTAAAG
CGAAGGGCGTGGAGATGAAACtctgggaaatgaagccacctATTTCCCAT
CCGAATCACGTGACTAAAAGTAGCGCAAATCCAAGGGATTCAAGTTTTCT
TGTTTgagaaagattgaaaatttcattaaagcCTCTCGGActtcagaaaa
tcttttatgATTTATGTTTGAATAAATCAGCTAGTCCTGGTCAATTTGAA
CAATTCATTTACGGGGTAGAAGtgggaataaatatttttcttacaccgtt
attaattttgtaaatttgttataaatttataaataaaaagaaaattctta
tttttatcGTATATAAGTGATAACTggtcaattttaattcatagGTAAAT
TAGCTTTCCCCATACCAATTAAAAATTTagtcaaaatataaaaagttgTT
CCAAGACGAAGATTCATATCAGAATTTCATGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00057920-exon-scaffold_302-1491911889:182073..182428 | TCONS_00057920-exon-scaffold_302-1491911889:182073..182428 | Clytia hemisphaerica | exon |
| TCONS_00057920-exon-scaffold_302-1510915933:182073..182428 | TCONS_00057920-exon-scaffold_302-1510915933:182073..182428 | Clytia hemisphaerica | exon |
| TCONS_00057920-exon-scaffold_302-1575043694:182073..182428 | TCONS_00057920-exon-scaffold_302-1575043694:182073..182428 | Clytia hemisphaerica | exon |
| TCONS_00057920-exon-scaffold_302-1491911889:182599..183255 | TCONS_00057920-exon-scaffold_302-1491911889:182599..183255 | Clytia hemisphaerica | exon |
| TCONS_00057920-exon-scaffold_302-1510915933:182599..183255 | TCONS_00057920-exon-scaffold_302-1510915933:182599..183255 | Clytia hemisphaerica | exon |
| TCONS_00057920-exon-scaffold_302-1575043694:182599..183255 | TCONS_00057920-exon-scaffold_302-1575043694:182599..183255 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_302 | supercontig | scaffold_302:182073..183255 + |
Blast
The following BLAST results are available for this feature:
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