TCONS_00057929 (transcript) - C. hemisphaerica

Overview
NameTCONS_00057929
Unique NameTCONS_00057929
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1706

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00057929 ID=TCONS_00057929|Name=TCONS_00057929|organism=Clytia hemisphaerica|type=transcript|length=1706bp
aATGTCATACGTGAACCTAGGTAGGATAGCGGACACGCCCATCATTTTAC
AACGGGCGTTGACAGGCGGTCTAACCAGGGGGAAAagtactttttctctt
tttgcgaaaaaagttCGATTTCCTAGCTTTTTCTTACATCCTAAGCTTTT
CTGCGAGACAAGAACCCTTGCATTTGTTTTGGAAGCTTGTTACATCTAAA
CTACCTGAGAACATCATGTGATCGAAGGGTGATAGATACACAACACAAAC
GAAACCAAGTTGACAAGGTGACAAATGACACCATGTAATTTGTAAGCATT
GTATTGGGAAATAAAATTCTTGCATTTTCTTTTGGCCAAGACGTTTCCAC
ACCCAAGAAGCATCATGCTGGAGAAAGCATTTACCTTTTTCCTGCTAGTT
TCAGCGGTTTTTGCACagATTGAAGAGCCATGTAGACAAGATGCTTATCC
TCCACCTGAAAACTCTAAAATCAAAACGGTGGTTTTGAATCTTGATTCTG
CACCTGAAGAAAGATGGCCTCACATTGTAGGTCCATACAAAGAAGAGATG
GCAGATTTGATTGGTGTTATCAAGGATTTAGTTCCTGCCaaagttattaa
ttttgttgatAACTACTTTCCCAGTATTTTAACAAGACTGCCCGAGCCAT
ATGCAGGGGAAATCAAGGGTGTTGCAGATGCTACAGGACTCAATCTTGga
GAGGCAATATTATACAATATCTTCTATGAAATTTTCACTGCATGCACATC
AATCGTCGGAGAAGATGAATCAGgAAAGCTGTACCATGCAAGAAATCTTG
ATTTTGGATTGTTGATGGgtTGGGACAACAAGAATAACACTTGGGCCATC
ACAGAACGTCTAAGACGAATGATGATAAATGTTGAATATCAAAGTAATGG
CAAAACTGTCTTCAAAGCTGTCCATTTTGCTGGTTATATTGGCATTCTGA
CTGCTGTCAAACCTCAAACCTTCACACTTACAATGAACGAACGATTTGCC
TTGGATGGTGGATATGTTGGTATTTTTGAATGGTTGCTTGGAATATCTCA
AGGACAATGGATGGGATTTTTAACCAGAACCACCTTACTAAACGCCACTG
AttaCCAAACAGCAGTAGATATGTTATCAAAAACGGAGATGCTTGCACCT
GCATACTTCATTGTTGGCGGAACCAAATCAGGTGAAGCTACTGTCATCAC
CAGGTCCAGACAAAAGGCTATCGACACTTGGAAGATGGACAAAAGTAAAG
GAGAATGGTTCTTGTTGGAGACCAACTACGATCATTGGAAGAAACCACTT
TTCATCGATGACAGACGAACACCTGGAAACAAGTGCATGAATGAAGTCAC
TCAAAAGGGCATGGGTTTGAAAGGACTGTTCAATGTTTTGTCTACTAAAC
CAAATCTCAACAAGTTAACAACATACACAGCCTTGATGCAAGTTGACGCT
GGCTCCCTCGATACGTATCTCCAAGACTGTCCCGATCCTTGCTGGCCCTG
GTAGACCATCCGAAATAATATTGATTTTGTGTCCttttattttcgtaatt
ttattttgtaacttttgttttgattttgtttttgatatttaaTGAGACAT
TTTTGATCTTCATCAAGCTTTTGATTCGTGGAATCTCGAGTGAAGTGTAT
TTCGACGAAAGCTTTTGACTTTTTAAACCTTTGTATCTTAACGATTGATA
CTCGAG
Run BLAST on NCBI

transcript from alignment at scaffold_302:332811..351682+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00057929 ID=TCONS_00057929|Name=TCONS_00057929|organism=Clytia hemisphaerica|type=transcript|length=18872bp|location=Sequence derived from alignment at scaffold_302:332811..351682+ (Clytia hemisphaerica)
aATGTCATACGTGAACCTAGGTAGGATAGCGGACACGCCCATCATTTTAC
AACGGGCGTTGACAGGCGGTCTAACCAGGGGGAAAagtactttttctctt
tttgcgaaaaaagttCGATTTCCTAGCTTTTTCTTACATCCTAAGCTTTT
CTGCGAGACAAGAACCCTTGCATTTGTTTTGGAAGCTTGTTACATCTAAA
CTACCTGAGAACATCATGTGATCGAAGGGTGATAGATACACAACACAAAC
GAAACCAAGTTGACAAGGTGACAAATGACACCATGTAATTTGTAAGCATT
GTATTGGGAAATAAAATTCTTGCATTTTCTTTTGGCCAAGACGTTTCCAC
ACCCAAGAAGCATCATGCTGGAGAAAGCATTTACCTTTTTCCTGCTAGTT
TCAGCGGTTTTTGCACaggtaaaaagttttttgttgtttaatTGAATGAA
TGTTTTATTCTTTTATAATGCtttaaggacatgtttttttttgactgtac
caaaatgccGAGTTTCAACCAACCCGGTTCAAATTGGCACTAACAGAGAC
ATCTGAACCCTTTCTTatcgttattcaaaaataagaaaatagattagtag
ctctgtccgatactttttgtccgatcttaatagcttttatggaacttaag
atatcgcttgttgaatccggagtatttcagggatgaaaaaaatcagtgct
aattctaatcgtatatattttcctgacgagtctatctatcggggaagtga
tttgaaatttttgtttagttgataagaaaggaacaaactaaagaaaacag
gaattgttaaaatgagtgaaaaaatgattaaaaaagtcttgatcataact
cactccggtctttaaaaaaattactcctcagactattttatgattttaga
cTACCTCAGGAATGCATAGAAACCTCCTCAGGACCGAATAATGAGTCATG
GAGTGAGATATGATCCAAAACACTccatgattaattaatcctgaaacact
ccgaattttgaaatttcaaatagctcattttaaagcccttcccaaatttc
aatacatatcaaaatttttggaaaattcatcatgcgaatgacgaaataat
ttaaagtgattttcacgattttcgaaaacctgattttggtacagtcaaaa
aaaaacatgtccttaaaACATATTTATATTTTCAAGAGACCACTGAAAGA
TAATGTGAACAATAACACACTTCAGACACACCCCTTACACGATAAGTGCA
AAGGACTATTATgaagtttttttgtttactgtCTTCATTAGAGAAATAAA
AATACAACCCATATTATGGGCCATAAAAAGTTGTATGGCCCGCCGAAAAA
ATACCCCAAATATTTTTTGGGCCATGTCCAGGCCAAGTCTGGGCCACAAA
ATTTTGGATTTCCTCTTTCAAAAACCTGGCCCAACGAGCACGCCGGGGTT
AGGCCAGTTTGTTAGACCTTTCAGAAAACGCTAGGTTATTTTCTCATTAA
TCCCTTTATGTACATACAAGTTTTGCCACACATTCTTcactaccgtgagt
ggtcctaaatccgacagccctgactaattccgaccccccaaataactgtt
atgaaaaaaattctatgtttacaaacNNNNNNNNNNNNNNNNNNNNNNNN
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TTTAAAAAATAGAAGTAACATTTGTTACGTCACAGATTTAAAAAgaaggg
aaattttcaaacgTCTATTATTACacattgagaaaaaaactttcaataat
ataTAGCTTGTTTTGATCGTcttattctaaattttctaaatgtaacaaaa
aatgtGTGACAAATATTTGGGCTGACGTCCCCTTTAAAATCGTGAATATT
GAGTCATATTATTATGGTAAAGAAATGACTATTGAAATAGCCTGACCAAA
AGTGGAGTTTCTACTTCCAAATGAAGGGGAATTGGCATTAGATTTTTTAT
ATATCAAGACATAAAttttatagcttttaccaaatATTAAGTAACATTTA
ggataaaaaacattttttcccaGACAGGTAAAAGCCTTTTAGAAGGTTTG
TTCATTTAAGtacattttgagtttttgtaTCTTTTGAAATCTACCTAGTT
TGCACCCCTCCCTTTTTAATAAGTAAGTGATTATATGCACAAAAAATATA
AGGNGTaatttaaaaagtgtgaattgtaaaaaaataattactttttatga
tgctgttactgctgttgtacatattgcaataaaaaaattatgttttgtaa
aagaagcaattattgttatttctatttggttcaattggttcaatgtatca
aatttCTCAGTTTGGTATCTTTGTTGCGTTACAGCGAaaggcttgttttt
attttagtttgtatctttcaggcaaggctgtcggatttaggacaaCTCAC
GgtataattttcaaattatttagcAGCATTATTTAGCCGTTAAGGCAAGA
GGGGGTCAAGGCTAATCCCGTTAAGAATCAGTTTGCAGAGTATTGCAAGC
AAGGCTACACTCAAGGAAAAATTCGGAAATACCAAGCTCCGGACTGGAAG
AGCCCACCtgataaatttttttccagacaaggtgcacctatacttcagaa
attggcccaaaaaagcaaacaattgctaaaattagctgCACTTGAGGAGA
AAAAAGCAGAACTCTGCACTTGGGGTTAAAAACCGTCTGCACTTGCACCT
GCACTCAACTTTTTCCTAGTTGTGCACTTGAGATCTCAAGCAAACATGcc
acactctgcaaactgggtTACGAACATTCGAAAATTGAAATTAGTCTCCT
TGCATCTTATTGCCTTTTATAATTGCTTCTAAGAGTGAGATCGGCTGTCT
TTGTCTCTTCGTTAAAGAATTTAACATATTCCATGTACAAATGCACTTTA
ATTTGTTCAATCTTGTTTTTGTACCTACCTGTTTGTACTTGTTTGTGGCT
TCTGCTTGAACAGCTCATCCAAGCAGTGGTATGTCCAGAACAGTTGCAAG
GAAGGTGTCTAAgtgttttttgaatacttctttggGACAGTTTGTCAAAA
TCTCTTAATGATCTGGGAAGGGTGTTGAACAATCGAGGGCCCTTTTGGGA
AAAACTTTCCCTCCAGATATTTTTCTGTTTAATATTGACAGTTTTTAGAT
TGAAAATTCTCCCATGCATCCTTTTCCTTCATCATAATTAAAACTCGGGA
TGTTGCCTTCAATGATGTTCCAGGTGTAAATTATTTGATAATGCTCTCTC
CGTTTTTCAAGGCTATACAATTTTACTGATTTTAGTTTTTCCCAATAATT
AAGATGTCTGAGGGATGGAATGCCATGTGAGAACAATTTGTGAACTTCTT
TCAGTTGCTGGACAAGACCATGTTTCCAGGATGACCAGAATTGAGAACTG
TAATCCAAATGAGGGATGGCTAGTGCTTTccataaaatcaattttccttg
ATTTGAGTGTGCAGTATATCCATGCACTGTGAGAACTTTGCTTCGCTTCA
GGGTGTCGTTTTTCCCAGTGCTCAAGTTTGAGACCATTCAGCTGCATGTT
GTTGTCTTCTGTTCATTTATAGACAATGTCTAGATCATTTTGTAGATGAT
AAACATCCTCCGGTTTGGATATTTCTTTCATCAATCAGGTATCCTCTGCA
AACGCTGCCAATATAGAATGAAAGATGTTGTTATCAATATCTTGAATCAT
GATAAGGAACAATAGCATTCCCAGGATCCTTGTGTCACACCTGAAATAAC
CTCTATTTCTGAGGACAAGGTTGAGTTTACTGAGACTCTCTGGGTTCGAT
GAGTCAAAAAAGATCTGATCCATTCGAGGAGTTTACTGTTTAAGCCATTT
TTCTGAAGTTTGTGCAACAAAATGGTATGGTCTACTCTATCAAAAGCTTT
ACTAAAGTCTAAATAGATAACTTCAATGTTGTTTCCATTATCTAGATAAT
GGGTCAGTCTTTCGGTGTGTTGAAGCAATTGACTAAGACATGAGCGGCCT
TTCCTAAAGTCATGTTGATTATAGTTATACAGATTGTTTTCTTCTAGATG
ATTCTGCATCTTGGCTTGTATAATCTTTTCAAAGACCTTTGAAATGACAT
TTCACATTATGTGGGATGTGAGGGCAACGGGTCTATAGTTTTCAGCAAGT
TTTTAACGTCAAGTGTTATTTTTAGGGTGAAGCCCCCACATTCTAACACT
catttaaatcttttttcagaaaatttttactAGCACACTTTCCATAGTAA
AGATGAAACATTTAAAGGGGAAGTCTGCTTTGGGAtatcatttttaccat
ttttttagagaagatacctacgatgaaaaaaaaaatgattgcaaaaagaa
cgaacaaaaaatctttttttttggctgagttattcaaattttaatttcta
ttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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GTGAATATTGAGTCATATTATTATGGTAAAGAAATGACTATTGAAATAGC
CTGACCAAAAGTGGAGTTTCTACTTCCAAATGAAGGGGAATTGGCATTAG
ATTTTTTATATATCAAGACATAAAttttatagcttttaccaaatATTAAG
TAACATTTAggataaaaaacattttttcccaGACAGGTAAAAGCCTTTTA
GAAGGTTTGTTCATTTAAGtacattttgagtttttgtaTCTTTTGAAATC
TACCTAGTTTGCACCCCTCCCTTTTTAATAAGTAAGTGATTATATGCACA
AAAAATATAAGGAGGAGACCACCTTATAGTCTAGCTAATCAAAAAGATAG
CCAATCTTATCATTTACTAATGATCACAGTCTGTTTTAAAGTAAATATAT
ATACCACCAAAACACAAAAAGTGTGTGATGTTTATAAAGACATAGttata
ttgttatattgtgaaatttgggggatgggtatatagggcgATGAAATAAA
CTTaaggggggttcatacccctctgcaaactattaTCTATTTTCCAATAA
ATGCTCCTTATCAACTGTCGAACTATTGTAATTAGAATAAAGACCTTTCT
TTTTAATAGATTGAAGAGCCATGTAGACAAGATGCTTATCCTCCACCTGA
AAAGTATGTAGTTATTCAAAATCTTATAATAATAAATCAACTAACTCTAT
AATTTGTTTAGTAATTTTTGTATTGTGAAAAATCTTTGTGCAANTGTTTG
TGGCTTCTGCTTGAACAGCTCATCCAAGCAGTGGTATGTCCAGAACAGTT
GCAAGGAAGGTGTCTAAgtgttttttgaatacttctttggGACAGTTTGT
CAAAATCTCTTAATGATCTGGGAAGGGTGTTGAACAATCGAGGGCCCTTT
TGGGAAAAACTTTCCCTCCAGATATTTTTCTGTTTAATATTGACAGTTTT
TAGATTGAAAATTCTCCCATGCATCCTTTTCCTTCATCATAATTAAAACT
CGGGATGTTGCCTTCAATGATGTTCCAGGTGTAAATTATTTGATAATGCT
CTCTCCGTTNTATTACTTAGCTTTCACATATGGTCCATCTCAACCATTCA
AGCTATTCTGGTGAATTTCTTTATGAATTGAAAACTGGAGATTCTACGAC
TTATCCACTGCCTTCGTACTTAATGTAAGATTTCTTATAATANTGATGTT
CCAGGTGTAAATTATTTGATAATGCTCTCTCCGTTTTTCAAGGCTATACA
ATTTTACTGATTTTAGTTTTTCCCAATAATTAAGATGTCTGAGGGATGGA
ATGCCATGTGAGAACAATTTGTGAACTTCTTTCAGTTGCTGGACAAGACC
ATGTTTCCAGGATGACCAGAATTGAGAACTGTAATCCAAATGAGGGATGG
CTAGTGCTTTccataaaatcaattttccttgATTTGAGTGTGCAGTATAT
CCATGCACTGTGAGAACTTTGCTTCGCTTCAGGGTGTCGTTTTTCCCAGT
GCTCAAGTTTGAGACCATTCAGCTGCATGTTGTTGTCTTCTGTTCATTTA
TAGACAATGTCTAGATCATTTTGTAGATGATAAACATCCTCCGGTTTGGA
TATTTCTTTCATCAATCAGGTATCCTCTGCAAACGCTGCCAATATAGAAT
GAAAGATGTTGTTATCAATATCTTGAATCATGATAAGGAACAATAGCATT
CCCAGGATCCTTGTGTCACACCTGAAATAACCTCTATTTCTGAGGACAAG
GTTGAGTTTACTGAGACTCTCTGGGTTCGATGAGTCAAAAAAGATCTGAT
CCATTCGAGGAGTTTACTGTTTAAGCCATTTTTCTGAAGTTTGTGCAACA
AAATGGTATGGTCTACTCTATCAAAAGCTTTACTAAAGTCTAAATAGATA
ACTTCAATGTTGTTTCCATTATCTAGATAATGGGTCAGTCTTTCGGTGTG
TTGAAGCAATTGACTAAGACATGAGCGGCCTTTCCTAAAGTCATGTTGAT
TATAGTTATACAGATTGTTTTCTTCTAGATGATTCTGCATCTTGGCTTGT
ATAATCTTTTCAAAGACCTTTGAAATGACATTTCACATTATGTGGGATGT
GAGGGCAACGGGTCTATAGTTTTCAGCAAGTTTTTAACGTCAAGTGTTAT
TTTTAGGGTGAAGCCCCCACATTCTAACACTcatttaaatcttttttcag
aaaatttttactAGCACACTTTCCATAGTAAAGATGAAACATTTAAAGGG
GAAGTCTGCTTTGGGAtatcatttttaccatttttttagagaagatacct
acgatgaaaaaaaaaatgattgcaaaaagaacgaacaaaaaatctttttt
tttggctgagttattcaaattttaatttctattNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCACTGCCTTCG
TACTTAATGTAAgatttcttataataaaataaacTTTCTCTTTTTCGGTT
CTTATCAATTTTAGCTCTAAAATCAAAACGGTGGTTTTGAATCTTGATTC
TGCACCTGAAGAAAGATGGCCTCACATTGTAGGTCCATACAAAGAAGAGG
TATCTTTTTAATTAATGTCTCTAAGTTGGATGTTTTTTGtatgttaaaat
ttttaattgcttgtttttattttatatagCAAGTGCACAATTTATATCCA
TCCCTAATAAAGAATTCCAGGCATTTTTTAAACCAACTTGTTTTGGTCGg
agttccattcattacttatTGTAACACCTTCTTCTCACCAAAccctctca
cagacccggtaggattttttcagtcagtggagataaaaataacaaactga
aactctatggggattgatattcccatactTTATATctagggatttcaatt
cttttgttttgaagtcagaaaattcagtgaggttgggaaaaatagcatta
tACTTTACAATGAGGtttagtttatttgattattttcagtggggacaaaa
ataggaggataattttccacagGCAACCTTATTTTGGACAAGTGGGaggg
ggtcccagtgggtctgtgagaagggttgTATTGTAAATATTAATGTTGTT
TTTAGGATGTTTATCATAATCTTTTATGACCCTTCATTCTTTTACAGATG
GCAGATTTGATTGGTGTTATCAAGGATTTAGTTCCTGCCaaagttattaa
ttttgttgatAACTACTTTGTAAGTATTATAAAGTTTAGTTTGTCTTATA
GTTATTGATTTGCAAGGTTCTCATGTATCTATGTACATAACCAGTAACCA
TTAAAAGTCCTTTTGATACTAAAGGTGACTTAAAATCAAGATTAAATTGA
AAGAACAGAAATCTTCCCAAAATTTCACTTCAGCCCTACCCAGAATGAca
tatcttttaaccatattggGAAAGAAATCTTTAAATTGTGTTCCTGTGAT
GTCattttcttcctttagctttaGTCAAAAATAATCAGATAGGGCACTGA
TATTAAAATTACACCGCACCTGTGCTGTCCGAGATGACTCTGCTATTATC
CACAATAGTTCACTATCAATAGATAGAGGAATAAGATATAAACATGACAT
GAGATTCTTCgagaaaatttgagaattacacacaaacaaaatagaaaagt
gtaACCTGGTGTAACTCATTTGATCAAATTCAAACAATGATTTGTNATTT
GAGAATTACACacaaacaaaatagaaaagtgtaACCTGGTATAACTCATT
TGATCAAATTCAAACAATTATTTGTTCTCTCCTATAAAGaaatttacttt
cgttttgttttgaagagaaTTCGAATTTCTTTAATTAAAATGAGGTCGTT
ATAATTACGTTaaagaagaaacaacaaaagaaaagagaaaaaaaaggaaa
acatagAGGCGGGCAAGCTAAGGCAGAAAATATAATTGCTGAATATAGAT
TGaccttcaatttcaaaacaaagttggAATGAAATATAAACAAGACTATA
TCAATCTGCAACTCAAAGTCATCTtttgaaagaacaaaaacattgcttgc
gaaattgAAAGTAACACACAAATAAAATGCAGACTATGGCTATTAATATA
AAGATGAgtatattcttgatattttcNACTCAAAGTCATCTtttgaaaga
acaaaaacattgcttgcgaaattgAAAGTAACACACAAATAAAATGCAGA
CTATGGCTATTGATATAAAGAgtatattcttgatatttttatcTCTAGCC
CAGTATTTTAACAAGACTGCCCGAGCCATATGCAGGGGAAATCAAGGGTG
TTGCAGATGCTACAGGACTCAATCTTGGTAAGGGATGTCATTGACCTCTT
TTGCTTTCTCATTCATGGGATTAAATTCCTAAAAACACCTAAGCTTCTTG
ATTTTAATTGCCAACTCAAATTCGATTGTGACTTATTCCATTTGTAACAG
TTTATATTGAAATAATGATGTTTAATTATTAAAAAGTAATTGGAAATATG
ACAGCTTGTTTTGAatctcttttctttctttaggaGAGGCAATATTATAC
AATATCTTCTATGAAATTTTCACTGCATGCACATCAATCGTCGGAGAAGA
TGAATCAGGTAGAATATtagaaatttgtgaaaattgtatcttcaaaaaaa
ttgtagGTACTATTGATAtgaggtaaattttttttctccattttaggAAA
GCTGTACCATGCAAGAAATCTTGATTTTGGATTGTTGATGGggtattcaa
atttttaatttcgaaaaattacaaaatcttttcagttttttttctaaaag
tcgACTCTaatgtttaaaagaaaagactTTGTGGATagaacaaatgtttt
tttatcgtatagtTGGGACAACAAGAATAACACTTGGGCCATCACAGAAC
GTCTAAGACGAATGATGATAAATGTTGAATATCAAGTAAGAATATTACTT
CTATGATCAGATTTTCATCCTCTGATCCTtaaaatgccttaaatcaatTA
AATTAGCAACTACAAATAAAAGTGTTGTTCATttacatagtgtcctcccc
ccctggattcaggggggaatgggttttgaggtcaaaaggacgtacagggg
gaaagaattttttttgaagccaggggGGGGGGAAACGAGGCagggggaat
ggaaaattttcattNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNtcttgaattagaactaccttagggaaaacaataagc
gttaagttcatcaaattacagctttttaattttatgcttggggggggggg
acagAAAAATTTTGGAGGCAGGGTGGGGAAAAATGAGGGgggggggaatg
gaaaattttcattctaggcatggggggggaagagaccctgaaggacacta
tgaTTTAGGAAAAAAGTTCTATGTTAGAatcttttttatcaaagttCAGT
TTAATAATGAAATCCTTTAAAATTTGTAGAGTAATGGCAAAACTGTCTTC
AAAGCTGTCCATTTTGCTGGTTATATTGGCATTCTGACTGCTGTCAAACC
TGTAAGTTTTGAGTTTTCTTGTTGTTAGTGGCAAATAAGAAGGGAATTTT
TCGTTCTGAAGTATGAGAGATTTCCTAACTATTCATATATTTTTTAGTGA
AGTGCTAAGAGACGATTGTTTTGATGCATTCTTTTAGtactttttttcat
ccaatatAGCAAACCTTCACACTTACAATGAACGAACGATTTGCCTTGGA
TGGTGGATATGTTGGTAAGTCAACGTTTACTCTGttgatttttattgaaa
ataaggataaggatttgttttgaaaatcttaGATTTAAAAAGATCCCTCT
TTACATTTGCAAAACATCAACCGTTGAAAAAGAGCAACCTTCTGAAAATA
GTCTTAGGTTTTCTGTTCCTGTCTTGGAGGTCCTTTCAAAGCTAAACTTT
CGAAACTTATTATTGCAATTTGATTATGTTTGAGAAGTAACATTGTTTTA
CTTACTCAGTACcctgaatgaataaaaattattatttttgagaaaatttc
attcattatttTCCAGGTATTTTTGAATGGTTGCTTGGAATATCTCAAGG
ACAATGGATGGGATTTTTAACCAGAACCACCTTACTAAACGCCACTGAGT
AAGTCTACTCCGATTACCTTAAATCTCTTTTTCTCATTGTCGAGGCTAAG
TTAACCATTTCTATCAATCACGAGGCAATTTTGTTACACTAGGCGATTTT
TAAGATACTCCTTCCAAGAGTAGTAACCATGCAATGCCAATCAAACGTAA
ATGGGTAGAATTTCTNCAATTTTGTTACACTACGCGATTTTTAAGTTACT
CCTTCCAAGAGTAGTAACCATGCAATACTAGCGAAACGTAAATGggtaga
atttcatttttagttaCCAAACAGCAGTAGATATGTTATCAAAAACGGAG
ATGCTTGCACCTGCATACTTCATTGTTGGCGGAACCAAATCAGGTGAAGC
TACTGTCATCACCAGGTCCAGACAAAAGGCTATCGACACTTGGAAGTAGG
TTACTATAAAAATTCAACCTTTGGAGTAATACACTGGGTAGAATTTAGGT
TCTCTTCTCGAAGAGCtcttttaatttttcgatttgaaGTGTTTTTGCCT
CCTAGATGATAATTTGAGCCTTCCTCATATTGTGATTACTTCAGGTTGTT
CAGAACGAaactaagaaaaaataaccgTGAAGAACTGTTCTCGCCTAGTG
TTCCCTCTGAGTTATCTACAACTGAATGTACCATCGTTCTGCTCTTCAGC
GTTTCATAGTGAAGCTTTTAGTGACCAGTCTTTCNCAACCATCGTTCTTC
TATTTGGAAGTTTCATAGTGAATCTTTTAGTGACCAGTCTTTCATTATTG
TTCAGGATGGACAAAAGTAAAGGAGAATGGTTCTTGTTGGAGACCAACTA
CGATCATTGGAAGAAACCACTTTTCATCGATGACAGACGAACACCTGTGA
GACTATTTCTCTATTAATCTGTTTTATGCTGCTAtaatctatttttattt
atgCTTTGAATCTCAAAATGACTTTTAGTACCATATCAACATATATTACC
CTCATATTACCCTAAAACGGCATACCATTGAAAGCGCTATTCTTCCATCT
CCTATCATTTTGATGgctttactttttgttttatttctttctCCAGGGAA
ACAAGTGCATGAATGAAGTCACTCAAAAGGTTTGTTTGCTATTCTAATGT
TTTTCAACACAAAACTGTTTTATGAACCCCTAAATGACAAAATGTAATaa
tgaaatccaaaaaatatatCATCATTCTAAAAATATTATCTTCTATTTAG
GGCATGGGTTTGAAAGGACTGTTCAATGTTTTGTCTACTAAACCAAATCT
CAACAAGGTAAAACTTTCCACTCCTGTTTATAACTTTTTGCTACCATTCT
TTGGTCAATCATTACCATCACTCGTTTTCTCGGATCAAATATCTTTTGCT
ACAATATGCCATTTCTATGAGTTATGGGTAACCAGGACCACTGTGCTAAC
GacttttttggatatttttgcGTTTGGGGTGCAATCTCAGTGTTAATGGT
CAATGCTTTGAAGAACTATTGCTTTGGATGCAGTTAGCTCTTTTTCAGAA
ATtgtaaattgtatttttttcttcttatagTTAACAACATACACAGCCTT
GATGCAAGTTGACGCTGGCTCCCTCGATACGTATCTCCAAGACTGTCCCG
ATCCTTGCTGGCCCTGGTAGACCATCCGAAATAATATTGATTTTGTGTCC
ttttattttcgtaattttattttgtaacttttgttttgattttgtttttg
atatttaaTGAGACATTTTTGATCTTCATCAAGCTTTTGATTCGTGGAAT
CTCGAGTGAAGTGTATTTCGACGAAAGCTTTTGACTTTTTAAACCTTTGT
ATCTTAACGATTGATACTCGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036529XLOC_036529Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00057929-exon-scaffold_302-1491911889:332811..333228TCONS_00057929-exon-scaffold_302-1491911889:332811..333228Clytia hemisphaericaexon
TCONS_00057929-exon-scaffold_302-1510915933:332811..333228TCONS_00057929-exon-scaffold_302-1510915933:332811..333228Clytia hemisphaericaexon
TCONS_00057929-exon-scaffold_302-1575043694:332811..333228TCONS_00057929-exon-scaffold_302-1575043694:332811..333228Clytia hemisphaericaexon
TCONS_00057929-exon-scaffold_302-1491911889:343020..343063TCONS_00057929-exon-scaffold_302-1491911889:343020..343063Clytia hemisphaericaexon
TCONS_00057929-exon-scaffold_302-1510915933:343020..343063TCONS_00057929-exon-scaffold_302-1510915933:343020..343063Clytia hemisphaericaexon
TCONS_00057929-exon-scaffold_302-1575043694:343020..343063TCONS_00057929-exon-scaffold_302-1575043694:343020..343063Clytia hemisphaericaexon
TCONS_00057929-exon-scaffold_302-1491911889:346075..346159TCONS_00057929-exon-scaffold_302-1491911889:346075..346159Clytia hemisphaericaexon
TCONS_00057929-exon-scaffold_302-1510915933:346075..346159TCONS_00057929-exon-scaffold_302-1510915933:346075..346159Clytia hemisphaericaexon
TCONS_00057929-exon-scaffold_302-1575043694:346075..346159TCONS_00057929-exon-scaffold_302-1575043694:346075..346159Clytia hemisphaericaexon
TCONS_00057929-exon-scaffold_302-1491911889:346708..346779TCONS_00057929-exon-scaffold_302-1491911889:346708..346779Clytia hemisphaericaexon
TCONS_00057929-exon-scaffold_302-1510915933:346708..346779TCONS_00057929-exon-scaffold_302-1510915933:346708..346779Clytia hemisphaericaexon
TCONS_00057929-exon-scaffold_302-1575043694:346708..346779TCONS_00057929-exon-scaffold_302-1575043694:346708..346779Clytia hemisphaericaexon
TCONS_00057929-exon-scaffold_302-1491911889:347809..347887TCONS_00057929-exon-scaffold_302-1491911889:347809..347887Clytia hemisphaericaexon
TCONS_00057929-exon-scaffold_302-1510915933:347809..347887TCONS_00057929-exon-scaffold_302-1510915933:347809..347887Clytia hemisphaericaexon
TCONS_00057929-exon-scaffold_302-1575043694:347809..347887TCONS_00057929-exon-scaffold_302-1575043694:347809..347887Clytia hemisphaericaexon
TCONS_00057929-exon-scaffold_302-1491911889:348094..348168TCONS_00057929-exon-scaffold_302-1491911889:348094..348168Clytia hemisphaericaexon
TCONS_00057929-exon-scaffold_302-1510915933:348094..348168TCONS_00057929-exon-scaffold_302-1510915933:348094..348168Clytia hemisphaericaexon
TCONS_00057929-exon-scaffold_302-1575043694:348094..348168TCONS_00057929-exon-scaffold_302-1575043694:348094..348168Clytia hemisphaericaexon
TCONS_00057929-exon-scaffold_302-1491911889:348257..348302TCONS_00057929-exon-scaffold_302-1491911889:348257..348302Clytia hemisphaericaexon
TCONS_00057929-exon-scaffold_302-1510915933:348257..348302TCONS_00057929-exon-scaffold_302-1510915933:348257..348302Clytia hemisphaericaexon
TCONS_00057929-exon-scaffold_302-1575043694:348257..348302TCONS_00057929-exon-scaffold_302-1575043694:348257..348302Clytia hemisphaericaexon
TCONS_00057929-exon-scaffold_302-1491911889:348423..348495TCONS_00057929-exon-scaffold_302-1491911889:348423..348495Clytia hemisphaericaexon
TCONS_00057929-exon-scaffold_302-1510915933:348423..348495TCONS_00057929-exon-scaffold_302-1510915933:348423..348495Clytia hemisphaericaexon
TCONS_00057929-exon-scaffold_302-1575043694:348423..348495TCONS_00057929-exon-scaffold_302-1575043694:348423..348495Clytia hemisphaericaexon
TCONS_00057929-exon-scaffold_302-1491911889:349190..349261TCONS_00057929-exon-scaffold_302-1491911889:349190..349261Clytia hemisphaericaexon
TCONS_00057929-exon-scaffold_302-1510915933:349190..349261TCONS_00057929-exon-scaffold_302-1510915933:349190..349261Clytia hemisphaericaexon
TCONS_00057929-exon-scaffold_302-1575043694:349190..349261TCONS_00057929-exon-scaffold_302-1575043694:349190..349261Clytia hemisphaericaexon
TCONS_00057929-exon-scaffold_302-1491911889:349420..349474TCONS_00057929-exon-scaffold_302-1491911889:349420..349474Clytia hemisphaericaexon
TCONS_00057929-exon-scaffold_302-1510915933:349420..349474TCONS_00057929-exon-scaffold_302-1510915933:349420..349474Clytia hemisphaericaexon
TCONS_00057929-exon-scaffold_302-1575043694:349420..349474TCONS_00057929-exon-scaffold_302-1575043694:349420..349474Clytia hemisphaericaexon
TCONS_00057929-exon-scaffold_302-1491911889:349777..349858TCONS_00057929-exon-scaffold_302-1491911889:349777..349858Clytia hemisphaericaexon
TCONS_00057929-exon-scaffold_302-1510915933:349777..349858TCONS_00057929-exon-scaffold_302-1510915933:349777..349858Clytia hemisphaericaexon
TCONS_00057929-exon-scaffold_302-1575043694:349777..349858TCONS_00057929-exon-scaffold_302-1575043694:349777..349858Clytia hemisphaericaexon
TCONS_00057929-exon-scaffold_302-1491911889:350124..350255TCONS_00057929-exon-scaffold_302-1491911889:350124..350255Clytia hemisphaericaexon
TCONS_00057929-exon-scaffold_302-1510915933:350124..350255TCONS_00057929-exon-scaffold_302-1510915933:350124..350255Clytia hemisphaericaexon
TCONS_00057929-exon-scaffold_302-1575043694:350124..350255TCONS_00057929-exon-scaffold_302-1575043694:350124..350255Clytia hemisphaericaexon
TCONS_00057929-exon-scaffold_302-1491911889:350616..350706TCONS_00057929-exon-scaffold_302-1491911889:350616..350706Clytia hemisphaericaexon
TCONS_00057929-exon-scaffold_302-1510915933:350616..350706TCONS_00057929-exon-scaffold_302-1510915933:350616..350706Clytia hemisphaericaexon
TCONS_00057929-exon-scaffold_302-1575043694:350616..350706TCONS_00057929-exon-scaffold_302-1575043694:350616..350706Clytia hemisphaericaexon
TCONS_00057929-exon-scaffold_302-1491911889:350907..350939TCONS_00057929-exon-scaffold_302-1491911889:350907..350939Clytia hemisphaericaexon
TCONS_00057929-exon-scaffold_302-1510915933:350907..350939TCONS_00057929-exon-scaffold_302-1510915933:350907..350939Clytia hemisphaericaexon
TCONS_00057929-exon-scaffold_302-1575043694:350907..350939TCONS_00057929-exon-scaffold_302-1575043694:350907..350939Clytia hemisphaericaexon
TCONS_00057929-exon-scaffold_302-1491911889:351061..351117TCONS_00057929-exon-scaffold_302-1491911889:351061..351117Clytia hemisphaericaexon
TCONS_00057929-exon-scaffold_302-1510915933:351061..351117TCONS_00057929-exon-scaffold_302-1510915933:351061..351117Clytia hemisphaericaexon
TCONS_00057929-exon-scaffold_302-1575043694:351061..351117TCONS_00057929-exon-scaffold_302-1575043694:351061..351117Clytia hemisphaericaexon
TCONS_00057929-exon-scaffold_302-1491911889:351391..351682TCONS_00057929-exon-scaffold_302-1491911889:351391..351682Clytia hemisphaericaexon
TCONS_00057929-exon-scaffold_302-1510915933:351391..351682TCONS_00057929-exon-scaffold_302-1510915933:351391..351682Clytia hemisphaericaexon
TCONS_00057929-exon-scaffold_302-1575043694:351391..351682TCONS_00057929-exon-scaffold_302-1575043694:351391..351682Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_302supercontigscaffold_302:332811..351682 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
55.3958	60.4638	31.2444	27.4201	41.7007	33.1611	60.0308	63.3722	177.147	124.273	220.262	216.87	208.578	234	315.718	277.548	179.266	201.528	388.373	411.622	294.123	302.544	253.051	302.795	215.373	180.219	208.944	391.822	882.861	968.329
Blast
[Close]
BLAST of TCONS_00057929 vs. Swiss-Prot (Human)
Match: ASAH1 (Acid ceramidase OS=Homo sapiens GN=ASAH1 PE=1 SV=5)

HSP 1 Score: 385.956 bits (990), Expect = 1.931e-128
Identity = 174/367 (47.41%), Postives = 252/367 (68.66%), Query Frame = 2 
Query:  425 EPCRQDAYPPPENSKIKTV---VLNLDSAPEERWPHIVGPYKEEMADLIGVIKDLV-----PAKVINFVDNYFPSILTRLPEPYAGEIKGVADATGLNLGEAILYNIFYEIFTACTSIVGEDESGKLYHARNLDFGLLMGWDNKNNTWAITERLRRMMINVEYQSNGKTVFKAVHFAGYIGILTAVKPQTFTLTMNERFALDGGYVGIFEWLLGISQGQWMGFLTRTTLLNATDYQTAVDMLSKTEMLAPAYFIVGGTKSGEATVITRSRQKAIDTWKMDKSKGEWFLLETNYDHWKKPLFIDDRRTPGNKCMNEVTQKGMGLKGLFNVLSTKPNLNKLTTYTALMQVDAGSLDTYLQDCPDPCWPW 1501
            E CR+  YPP   +    V    +NLD  P +RW  ++      +  ++  +K+++       K++  VD   P +L   P P+  E+KG+A  T + LGE I +NIFYE+FT CTSIV ED+ G L H RN+DFG+ +GW+  N+TW ITE+L+ + +N+++Q N KTVFKA  FAGY+G+LT  KP  F+LT+NERF+++GGY+GI EW+LG     W+GFLTRT L N+T Y+ A ++L+KT++LAPAYFI+GG +SGE  VITR R++++D +++D  +G W++++TNYD WK P F+DDRRTP   C+N  +Q+ +  + +++VLSTKP LNKLT YT L+ V  G  +TYL+DCPDPC  W
Sbjct:   29 EDCRKSTYPPSGPTYRGAVPWYTINLDLPPYKRWHELMLDKAPVLKVIVNSLKNMINTFVPSGKIMQVVDEKLPGLLGNFPGPFEEEMKGIAAVTDIPLGEIISFNIFYELFTICTSIVAEDKKGHLIHGRNMDFGVFLGWNINNDTWVITEQLKPLTVNLDFQRNNKTVFKASSFAGYVGMLTGFKPGLFSLTLNERFSINGGYLGILEWILGKKDVMWIGFLTRTVLENSTSYEEAKNLLTKTKILAPAYFILGGNQSGEGCVITRDRKESLDVYELDAKQGRWYVVQTNYDRWKHPFFLDDRRTPAKMCLNRTSQENISFETMYDVLSTKPVLNKLTVYTTLIDVTKGQFETYLRDCPDPCIGW 395
The following BLAST results are available for this feature:
BLAST of TCONS_00057929 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ASAH11.931e-12847.41Acid ceramidase OS=Homo sapiens GN=ASAH1 PE=1 SV=5[more]
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