TCONS_00057950 (transcript) - C. hemisphaerica

Overview
NameTCONS_00057950
Unique NameTCONS_00057950
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length743

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00057950 ID=TCONS_00057950|Name=TCONS_00057950|organism=Clytia hemisphaerica|type=transcript|length=743bp
AggtaataaaacaaaaaataatacgTTTAATGGagataaaattgcaaaat
atctGTCTCAAATAGtgtctgtaaaatacattttccaatatttacaatcg
aatgtttttaaatttatgcTGAAGATGGCGGATTCCAAGTTGCAGAAAAA
CAtttaactttttaactttttgacttGAAAGAATTCGGGGCAAAGGAGTT
ATTTGGTATAATTGTCAAACCTatcaaaaaaagaatatataaaCAATCGA
AGATGTCATATTTCTGGCCTCAAAACAAGCCATTGACGTCTAAAAGACAT
GCAATTACTCAAGACTATGATGTTTCTCAAAAGTCACTTGGAGTTGGAAT
TAATGGCAAAGTTTTGGAGTGTTACAGAAAGAAAGATAAGGGAAAATTTG
CATTGAAGgtTCTAAAAGACTCTGTGAAAGCTCGTCGTGAACTAGATTTG
CACTGGAAAGCTTGTGAATGTCCTTACGTTGTGAAAATTGTTGACGTGTA
TGAGAACAGATTTGGAAAAGATGATTGCCTTTTGGTGGTTATGGAATGCA
TGGAAGGTGGAGAACTTTTCGAACGAATTCAAAACAGAGCTGATCATCCA
TTCACTGAAAGAGAGGCGGCTGCAACAGTCAGGATGATCAGTATGGCAAT
CATACATTTACACACAATGAACATCGCTCACAGAGATTTGAAAcCTGAAA
ATTTGTTGTACGTAGAAAAATCTAATGCATCGTTATTAAAACT
Run BLAST on NCBI

transcript from alignment at scaffold_302:55594..70968-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00057950 ID=TCONS_00057950|Name=TCONS_00057950|organism=Clytia hemisphaerica|type=transcript|length=15375bp|location=Sequence derived from alignment at scaffold_302:55594..70968- (Clytia hemisphaerica)
AGGTAATAAAACAAAAAATAATACGTTTAATGGAGATAAAATTGCAAAAT
ATCTGTCTCAAATAGTGTCTGTAAAATACATTTTCCAATATTTACAATCG
AATGTTTTTAAATTTATGCTGAAGATGGCGGATTCCAAGTTGCAGAAAAA
CATTTAACTTTTTAACTTTTTGACTTGAAAGAATTCGGGGCAAAGGAGTT
ATTTGGTATAATTGTCAAACCTATCAAAAAAAGAATATATAAACAATCGA
AGATGTCATATTTCTGGCCTCAAAACAAGCCATTGACGTCTAAAAGACAT
GCAATTACTCAAGACTATGATGTTTCTCAAAAGTCACTTGGAGTTGGAAT
TAATGGCAAAGTTTTGGAGTGTTACAGAAAGAAAGATAAGGGAAAATTTG
CATTGAAGGTACGAGTATTTCTATTTTGTGATAAGTCTGTTTCAAATCTC
TGGACATCAGGTACCAGGGTTGTAGCCGTAAACCAACCTTTGTGCAGCAG
GTTGGCAGACGATATCATCCACCAGAGGATGAATGATGCTAGTGAAAATT
TTCAATATCTGCGGACCTAGATGGGGGTTCGGTTATTATCAGTTAGGGTT
GGAGCTCGAGAGTCTCAGTATAAAGCCGAAGGCCTTCTTAGGGGCATTTG
CTCCCTGAGACTTAACTAAGGATCCCGTACCGTAGGGATCCTTGTAGGGG
CACCGGTAACCGGTAAGGCGTTTGGGGGAGCTTTCTTAATTAAAAGTCTC
TGGCAAATTACAGGCTATAAGTATTTGTGATTGACAGTTTTATGCCGTGT
CTCGATGGCGCAAGCGGTTAGGCGTTGGGTTTGTGAACCAAGGTTGCTTG
CATTTTGTGGTAAGATCAGCCGGGGTGGAAGACCTATTTCACGCACCGGT
ACAGGCAGATTTCAGAAAAATATTTAGAAAACAGCTAGAAGCACTTGAGT
TGAGAAAGTCAGAAAATCAGGACAGAAAATAGGAAAGTAGAAAATAGGGG
GAAAATAAGAGAGGATACATCCTGGTGGATGATATCGTTTGCCAATCCTT
TGTGCATCATTATATACTGAATGATGCCAATAGCAATAATTCCAGTCTGG
GGGAAATCTTTCTAATTACACGCTTAAATGCCTTGGGTATGGAAAAAAGT
TTGAACACATTACATACGGAAAAAATGAACAACTGAAAGTACACTCAGTC
TACAAATCAGATGTACAGCAGCCAATCGAAATAAAAAGTGCAGTGAAAGA
CCTGGGTATCCTGCTCTCAAACAACCTGTCATATGAAATGCACATTCAAA
CAATCACTAACAGAGTCAAGGGTATAAGTGCCTGGATATACAGAACCTTC
AAGTCCAGAGATAAATCAGTAATGATCACTCTTTGGAAGACATTGGTACT
TCAACATCTGGAATACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGA
AGCTCAAACACCTCAATATGTACAGTCTCGAGAGAAGACGCGAAAGATAC
CAAATTATATATACATGGTGTATAATCGAACAGCTGATGCCAAATTTTAA
CTATGGTGAAGGGGAAGGCGGTATTTATTCATATACAAACCAACGCACGG
GAAGAAAATGCCACCTCAAACCAGTGAATACAACGAACAAGAACATTTGG
AAGAGCTGCCTTTCAGACACCGGTCCAAGACTATTCAATGTGTTACCAAG
AAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGACTCGAATTCAATT
GTTGAAATGGTCAAACACCGGACCCCACGGGTTGAGTGAGCAGAGAATTT
GCTGAAACACATCAAAGGTAATCAAAGGTAAGGTATATATAACCTTGCAT
GCTTATTGTTATATACCAGGTGTGTAAAAAAAAATGCGCCTATTTTTCGA
TTTTTTGGCGTACAAATTTCTATTGAACAAAGACAAATGAAATTTTTAGG
GAAGATTTAAAATTTAATTTTTTACCCTTGGTGAAAATTATACATGTTTA
TGTTCATTTAAAGTGACTTTATGATAATTCCGCTGACTTAGGTCAATTTT
TCATTGTTCACGGATTTTCATAGTTAAACTTTCCCATATGGAACAAGGAA
CAAAATTACACTTCGTTTTTACGCTCTTATTTTGTCTTGCTACTTTTAAA
ACATTAAAATGGCATCATTTTTTCATTTCATAGGTTAAGTTTTGTTACAA
GGTCAATATATGATAGATTCTAGCTAGTTCCAATCAAGCCATTTTTTAAC
GTCAATTGCGACGACAAAAAATACTTTCAGATCGTCAATGGTGCAGAAAT
GAACCGATGTTATTACCTTTTGTACATCAAAATCCTTAGGTTTTCAGTTC
AACTGTTTTGCAAAATGTTAAAGAAGCAGAACGAAGCTTGTATAATATAA
TATGATAGATTAAATAATGGAAATGAAACGAATTGATGAAAATTTGTTTT
GCTAAGAAATGCTTTACATTGCCTTGAACACCTTGAGAAGTTACGATAAC
ACTGCAAAAAGATTCCCAAAACCCCTTTAATTTGAAAACAAGATAAGTTT
GACATTAAAAAATTTGAGGTAACTTTGCCAAACTTTTAGAAATGTTTGGA
AATAAAACGTACAATACTCACAAAAAGATTCAAGCCGTTCAACTGAAAAG
AAAAATGTACGTCAGATTGTAAAATAGGGGCGTTTTTTTTTTACACACCC
GGTATGCATTCCAAGCTGTTGCAAGTTAAATTTTTTGCCCTGCTAAGATA
AAACTTTAAAGTAAAACAGATAGGTTCAATTTTTCTATATATACAGGGGA
AAATCTGTAACGAGAGAAAAACATTGATAGAACAGGGAATACTGTAACAG
ATTATTTTTTTCATCTTATTATATGTTAAGTTTTGCGTAAAATTGTCCGA
CTACTTTGGGTTTGTTCCTATCTAGGAAAAACTGTGTAGAAAAGTGTGGA
AACAAATGACACAGTAGGATGGACTAGTCGTTTAAGATGCAGTTACCCCC
TTCTGATTCACAGTTAGGGAAACCATCCAGGATCCTGCCATTCCATAAGC
CAGCAAAAACTAAATGACACTTGCAAACTTAAGTTTCTTACCATTTTCCA
TTGAAAACAACCAAAAAAATTGCTACTTCCCAAAGCCGGAGACCAAAACA
AATTATCTTCCAAGATTATGGCGCCCTTTTGGATCTATTGTTAAGGCCAT
CTAAAATGGTGGAAAGAGTTGCGNTTTTTATATGAATAAGGTGGCCATCG
AAAAAATGCTCTGTTCGTGTCGCAACGGGTGTTAAAAATGCATGCGTGCG
GACGGGCGGTCGAAAAAATTCCCGGATTTTTTGAAATCACGCCAGTAATA
CAGGGGCAGGTGGTGATGCGAACAAAACTATTTTTCAATGGCCGCCAGAG
CGATTAAGAACAAATTGCTTTTCGTGGATATTTTTCAGCGTAAAATATGA
TGCGGGCAGGTGACGCGCATAGAACAATTTTTCGATGGCCGCCTAAGCCC
GTCAACTGCTCTAACTTGGGACTATCTGACAAAACATGGGACGGCCATTC
GGCACGAGAAGCGTGAAAATGCAATTGCGTGCATTCGTGCAAGTGTCCAA
ATACAGATATCAAAAAGTCTGTTTTTCCGCGGAAAATTGTGAGATCTGTT
ATCGACACTTGGTACAAATTATGTACTTTTAGAATGCTTTGGAAATACAT
TTGGTTGTGATTATGAGATGGTGAAAGTTTGATCGATAAACTTGGTTGAA
GTACCAAAACAAACTTGTTGTCAAAGAGATTTAAACAGTAAGTGAAAATA
CAGTCCAGAAATCAACCATCACAAGATTTGACCAATCGTCCCAAGTTAGA
GCAGTTGATGGCATATAAATAAGAAAAGAGGTAAGTNCATAGTTTGCAGA
GGGGTATGAACCCCCCTAGGTTTATTTCATCCCCCCCTATATACCCATCC
CCCCCTTTTGTGATGAAATCTTATCCCCCCTTTTTTTTTACAGAAAATTC
GTTTCGAAGGAAACTCGCTTTCCCACCTACCAGCAAAATTATCAACAAGA
AAGAGTATGAAGTATTATAGTCACGAGCCAACAATGACAGAATATAACTA
GCGNCCAGAGCGATTAAGAACAAATTGCTTTTCGTGGATATTTTTCAGCG
TAAAATATGATGCGGGCAGGTGACGCGCATAGAACAATTTTTCGATGGCC
GCCTAAGCCCGTCAACTGCTCTAACTTGGGACTATCTGACAAAACATGGG
ACGGCCATTCGGCACGAGAAACGTGAAAATGCAATTGCGTGCATTCGTGC
AAGTGTCCAAATACAGATATCAAAAAGTCTGTTTTTCAGCGGAAAATTGT
GAGATCTGTTATCGACACTTGGTACAAATTATGTACTTTTAGAATGCTTT
GGAAATACATTTGGTTGTGATTATGAGATGGTGAAAGTTTGATCGATAAA
CTTGGTTGAAGTACCAAAACAAACTTGTTGTCAAAGAGATTTAAACAGTA
AGTGAAAATACAGTCCAGAAATCAACCATCACAAGATTTGACCAATCGTC
CCAAGTTAGAGCAGTTGATGGCATATAAATAAGAAAAGAGGTAAGTCTAG
CCTAGCCTGCAATAGTCGTTTGGTAGAACGTGACCGTCTTTTGAATAACT
AATTACTCCAGCAAAAATTTTTTAATGATAACATTATCATATTGTTTTCT
CATTTAAAACACAGCAGTTACCTGGGAACAAGATAATTCATCTCGTTTGT
TTTGGCTGAGTGAAAGTAATGTATGGGGAGTAGTTTGTTATTCAATAGAC
TGTCACATTCTCCTAAACAACTATTGTCAACACTGTCAAGGGGCGTTAAC
AGAACATGAGTTATCTGTTAACGCCCCCCTGACAGCTGATAATTAGGTTA
GGCTAGACTTACCTCATTTCTCTTTCCTATTCCAACAATACAATGCTTAT
ATACATAGTTGACACATGACACACATTGACAGAAGTATTTCCCAAGCAAT
ATTTATATTGAAATTTGCAATAAAGACAAAAGTGATCTTTTCTTCTCAGT
GGCTTCTGTAAGTTGCTCCATTCGAAAGTTTTTTTTAAGTTTCAACCAAT
GAGGTTGGCCACGTATGATAAAGGCTGGAAGGTTAACAACTGTCCCTAAA
GGCTTTTTGGTTCATTGGATGACAAGCATTCAGTTAGTCACACTAGTGTC
CTGTTGAAATGTTTATCAAAGGTTAATGCTGTGAAAGCACTATATTGTTT
ACTTGACTTGCAAGCAAAAAAATGCACCACGAAAATTCTGATTGGATTCA
CAAAAAAATAAATCGGGACTTTTTAATGAAATTAACATTTTCAAAAACTA
TGAGAAATTACCTAAATTTTTAGTCATAGGTGAAAAGATTTGACAACTGC
ACCAGTCATGGCTGGAACCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNCCTGTAACCTGTGACCTGTAGCCTGTA
ACCTGTGACCTGTAACCTGCAACCTGTAACCTGCGGTTTACACTTACCGT
GATTTTAGCCTGTGGCTAGGGGGGACTAACCATGTAAGGGACCACCTAAA
TTCTTTCAGATGGACCTGGGGCTAGATTCTATGTTAGGTTTTTTCTGAAC
TTTNAATAATCTTGTTGAACTTGTTTTTCTTTCATCATAAACTTCACTAT
GGAATGTCTTCTGTCTAAAAAAGTGTGTTTCTGAGAAAACTGTGTGTGCA
ATAAGCTNTTTATTATTATTATAACGTAACAAAGTTCTAGGCGCACGAGG
GCCTCTGGAACTGATCGTGATTATACGTATTTTACAATTGTCTTGTGTTG
AATCTTTTCGGGTGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNGGGGGGGGGTAAAAGATTGAGCAGCAATTGGTACCTGATTTTAGCCTG
TGGCTAGGGGGGACTAACCATGTAAGGGACCACCTAAATTCTTTCAGATG
GACCTGGGGCTAGATTCTATGTTAGGTTTTTTCTGAACTTGTTTTTCTTT
CATCATAAACTTCACTATGGAATGTCTTCTGTCTAAAAAAGTGTGTTTCT
GAGAAAACTGTGTGTGCAATAAGCTAAACTAACTGTTGTATTTGTTTGAT
TGTTTGAAAAGGATTATCGAAAAAATTTGAGGTATCATTGGCTAAAATGT
TTGGCAACCAGGGGTTGCCTAAATCTTAGGGGTCACCTGAATTCTTAGTT
GTTGAAAAATTAAGCACATCCAGGCTCATCCCAAATTAAGTGGTTCTTAC
AAAGAAAGTGTGTGACAAGTGGAGTATACCACAGATTTTCGCTTTTTTCC
CGCAGTTTTCTGCGGGTTCCCTCGATTCCCGTTAGATTTATTTTAAGGAA
GTTAGATTTATGTTTCTCTTGTCAGAGATCTCCCGCCGCCACATGCGGCT
CTATTAGGTTTTCCTGCGGGTTCCCTCGATTCCCGTTAGATTTATTTTAA
GGAAGTTAGATTTATGTTTCTCTTGTCAGAGATCTCCCGCCGCCACATGC
GGCTCTATTAGGTTTTCCTGCGGGTTCCCTCGATTCCCCTTGGATTTACG
TTTCTCTTGTCAGAGATCTCCCGCCGCCTGCGGGTTTTTTAGGTTTTCCT
GCGGGTTCCCTCAATTCCCCTTGGATTTACGTTTCTCTTGTCAGAGATCT
CCCGCCGCCTGCGGGTTTATTAGGTTTTCCTGCTGGTTCCCTCGATTCCC
CTTGGATTTACGTTTCTCTTGTCAGAGATCTCCAGCCGCCGCCTGCGNTG
CGGGTTTATTAGGTTTTCCTGCGGGTTCCCTCGATTCCCCTTGGTTTTAC
GTTTCTCTTGTCAGAGATCTCCCGTCGCCTGCGGGTTTATTAGGTTTTCC
TGCTGGTTCCCTCGATTCCCCTTGGATTTACGTTTCTCTTGTCAGAGATC
TCCAGCCGCCGCCTGCNCGCCTGCGGGTTTATTAGGTTTTCCTGCTGGTT
CCCTCGATTCCCCTTGGATTTACGTTTCTCTTGTCAGAGATCTCCAGCCG
CCGCCTGCGGGTTAATTAGATTTTCCTGCGGGTTCCCTCGATTCCCCTTG
GATTTATGTGTTTTAAGTATATGAAAAATGAGCTACTGCAAGAGGTTGTT
ATTTTTTAAAACGAAGATTTTGTAAAATGCAAGGGTGATTATTTAAATCG
TCGCAAAATTTCGCTGTTAATACAGCTTGTTTTTCTTTATTCTATTATAA
GCGGTGTATTTCAAGAAAATAGGTAGAATCTTCAATTATTTGCTAACACG
AAAAGTGCATGATATCTGTAAAAATCAAAGAACTTCCATTTATATATAGT
TATTTCAACGGGTAGTATAAATAACATTAATCATAATGAATTTTGTAATA
ATAAGAGGTATTCCAGGTTATAAAGTTCATTATAATTATATATAGAAGTT
ATACAATGTATAGCAATGTGCCCTCCCGGTTATTACCATAATGGCTTTAT
GGCAACTCCTGAACTTGGGCACAGGATGTACAGTTGGCAGGATGTACGGT
AAAGAAGTTATATAAATATGAAGGTAGTTTACTGAGAGCCGGTTATTGTT
AATACGTGATTGTAGATATTATCATAGAATGTTATTTTATTTACATTTTA
AGGAATTTTATGAAAAAAATTTAAAGACTGTTACTTTAATTTTATTTATA
TTTTCGGATTTTGAATAATATAGACTCTTAGTCAAAATACAAACGCATCA
AGATTTGAGTGTCCAAATAGTTTACTGAAATTCATAAATTTCTGATGTTT
TGATAACTAAAGATTTATAAATTACCCGCAGGGAACCCGCAGTGAAATTT
GGAAACCCACAGGCGGCGGCGGGATTCGAGGTTTCGATAACTAAAGATTT
ATGAATTACCCGCAGTGAAATTTGGAAACCTGCAGGCGGCGGTGTGATTC
GAAGTTTCGATAACTAAAGATTTATAAATTACCCGCAGTGAAATTTGGAA
ACCGGCAGGCGGCGGTGGGATTTGAGGTTTCGATAACTAAAGATTTATAA
ATTGCCCGCAGCGAACCCGCAGTGAAATTTGGAAACCCACAGGCGGCGGG
ATTCGAGGTTTCGATAACTAAAGATTTATAAATTACCCGCAGTGAAACTT
GGAAACCCGCAGGCGGCGGTGGGATTAGAGGTTTCGATAACTAAAGATTT
ATAAATTACCCGCAGCGAACCCGCAGTGAAATTTGGAAACCCACAGGCAG
CGGGATTCAAGGTTTCGATAACTAAAGATTTATAAATTACCCGCATAGAG
CCCGCAGTGAAATTTGGAAACCCGCAGGCGGCGGCGGGATTCGAGGTTTC
GATAACTAAAGATTTATAAATTACCCGCAGGGAACCCGCAGTGAAATTTG
GAAACCCGCAGGCGGCGGCGGGATTCGAGGTTTCGATAACTAAAGATTTA
TAAATTACCCGCAGGGAACCCGCAGTGAAATTTGGAAACCCGCAGACGGC
GGCGGGATTTGAGGTTCCGATAACTAAATATTCGAAAAGTTGCTATAGCA
TATTTTAAGTCAGTCCGCAGGGTTCTACGGGAAATATTGGAATATCTGTG
CCTAACTGGACAAGTGACGAAATTGGGAAGGGGTTGTCCACATTAAGCCA
ACTTTCAAAAGCAGCCTAGCCAAAGACTTCTTTGATCTGCTTATTAAATT
CACTGTTTATTTTGTTTGTATAATTTTTTTGTCAAGGTCACCAAGACTTT
TTTACAATGAAAATTTAGGAGAATTTTGAATTATTTTAATTAAAAATTGT
CTGATGTTGTCACTCATCAAGTGAGAAAAAGTCTAAAAATGTTCTTTGTT
CTTTCAAAAAAGCCTCAGTTTTTTATAAGAGGCTTATCTTATCATAAATA
TTCGATAAAATTAGGGTTTAACAATTTAAAAATCCCCCCCCCCCTGGACC
TTATTAAGACCTCTTGTTTATTAATTTTTTTAAATATTTTTATTTGTCAA
AAGACGAGTCCCTTATTTTTCTCTAAATAAAATGAAAATTTTCAATTGAA
AAATATTGGCTCAAAAGTAACAAATAATCCTTGAATCTGATAAAACAGTT
GTTCTTCAACTTTTAAATATACGTTAAAGGCTAAAAATATGCTCAAAATT
TTATATTAATTACAATTTCGAAATTCTATAGATTTACAATCGAGCATTTC
ACTTTTGGAAATTACCCTGTTAAGAATTTTCAAAGACATGAATTTTCAAG
GAAAAGGCCAAAATTTGCGAAGGTTTCTGCTTGCTAAAGTTTCATTATCC
ATGGAGTGAAAGATGATGACAAAAGAGATGTTAACATTACTAAACCGAAA
AAGCCCCCTAGTACTAATACTGTTACCAGCCTTGTGGTACAAAAGTAGCC
CTTTGACCATGATAACCTTGAGTATGATAATATCAAAAAGGATTATATTT
TGTAAATATCTCTATTATTTATAATATAATAAAAATATATATTTTACCCA
GCTTTGTATATTTGATAAAAATAACGTCAATATTTAATATCTCTATTACA
ACTCTCTTGGAGTATTCAAAGTTTTCAAAACCTGTCAATCTATTTCCACT
TGCACTGTATATCCTATAAAGAACGAAATTTTTGGAGCAAGTAAATTTTG
CAAATTTACCACATTTACTTGAATTAAATTAAGTTCCTGCTAAAATTTAT
TGGACCTATGTCAGGTCCTTTAAATTAACCCATGTTCGTTTGTTTCTTAG
TTCGTTTGTCTGTTACCAGCTTTTTGCACAATGATGTAAAATGGTGACAC
CGAAAATGTGACAGAGCCCTTTTTTTTGAGAAACAAATTTGTTGGGCCAA
TTTGGGCCAATAACTGTATAAAAATAGGGTTCTTTGGACTTTAGAAACAT
GAAGACTCATTCTGTCAATCTTTTTTATTTTCTATTTTCAGGTTCTAAAA
GACTCTGTGAAAGCTCGTCGTGAACTAGATTTGCACTGGAAAGCTTGTGA
ATGTCCTTACGTTGTGAAAATTGTTGACGTGTATGAGAACAGATTTGGAA
AAGATGATTGCCTTTTGGTGGTTATGGAATGGTGAGTATTGCGGTTATTT
TGATGTCTCATCGGTTTCTGATTTCCCCTTTTGGTATTGCAGGAGGTTAA
CTTTTATAGAAAGTGCGCATTTGCAATATGATTGTGCATATTCATTAAAA
TTCAATACTAAAATTTATAGTTGATACCGAATTTCCTTAACAACATGCTT
GATACTTTACCTGGCCCATTTCCGGAAACAAGACTTTTTATAGCCTCAAA
GTCATTTTCAAAGTCAATCTGGGTAATTTTCTCTTCTCCTTTTTATAGCA
TGGAAGGTGGAGAACTTTTCGAACGAATTCAAAACAGAGCTGATCATCCA
TTCACTGAAAGAGGTATAATTAAATTATACGCCTAAAGAAATAAGATATG
ATCCAAGACAAACTGTTTGTGAAGATAACGTGCTGATTATCTTTAGACAG
AAATAAGTAGATTGATGTTAGAAGCAGTGCCAAAACTTATGTCAACATCA
TAGGACCGTTTTTCAATATTTCCTAGGAAGATCGTAATCCTCACAATTTA
TAGTCCTTAACTATTCTAACATATTTAGACCAGTTTAAACAGCTCTCAAG
AAACTTACTTCGAAGACAAGGAAAATGTCAATTCTGCACTCTTTACAATG
CCTTTGAAAAACTTTCTTGAAAGGTTTCGGCTAGCTGCCCCTTTCAATTA
GCTTTTTGGATGTTTCCAAGTTTACATGATTTCTTTGCTGATCCACAGCC
CAATAATTTTTCCACAGAGGCGGCTGCAACAGTCAGGATGATCAGTATGG
CAATCATACATTTACACACAATGAACATCGCTCACAGAGATTTGAAAGTA
AGTGCTATTCTTCATGACTCTGCTTATTAGTATCTTCTTGGGTAGAGTAT
AAATGTAATACAATGTATTCATACAAGTTTCAATACAATACACCTGTTTT
TAAGCAGTGGCCCATCTATAGATGCTAATCCTTGCGATTGAGATAAATAA
GGATTTATGACCTTGGTTGTAAATATCAAAACTAGAAATTTTATAAAATT
GACTCATACTCTCGGGCTCCTAATAGACTGGGGATGGTGACAATAAACAG
GGGACCCGAAAAATTCTCAAATTGTAATAAATGGAAGGAAGGCCGACTTG
GCAGATCTGGAAAGCTTCATTCGACTGGAATTTTGTTGTTTATAAAAGGT
GATTTTACATTCCCATTAGTATTTAGCTTGTTGGTTCTATCCCCAAATGA
CAAACTGGGCTACTGAGACAGGAGTGTTTTCAATTTAGTGGTGTAAACTA
ATTTAAATAAAATAGATTAAACTTTTTGCAGAAGAAAAAGTACTAATGAA
TCTTTCATCAATTTTTATCTTTTAGCCTGAAAATTTGTTGTACGTAGAAA
AATCTAATGCATCGTTATTAAAACT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036534XLOC_036534Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00057950-exon-scaffold_302-1575043694:70561..70968TCONS_00057950-exon-scaffold_302-1575043694:70561..70968Clytia hemisphaericaexon
TCONS_00057950-exon-scaffold_302-1575043694:56988..57127TCONS_00057950-exon-scaffold_302-1575043694:56988..57127Clytia hemisphaericaexon
TCONS_00057950-exon-scaffold_302-1575043694:56656..56720TCONS_00057950-exon-scaffold_302-1575043694:56656..56720Clytia hemisphaericaexon
TCONS_00057950-exon-scaffold_302-1575043694:56172..56251TCONS_00057950-exon-scaffold_302-1575043694:56172..56251Clytia hemisphaericaexon
TCONS_00057950-exon-scaffold_302-1575043694:55594..55643TCONS_00057950-exon-scaffold_302-1575043694:55594..55643Clytia hemisphaericaexon
TCONS_00057950-exon-scaffold_302-1510915933:70561..70968TCONS_00057950-exon-scaffold_302-1510915933:70561..70968Clytia hemisphaericaexon
TCONS_00057950-exon-scaffold_302-1510915933:56988..57127TCONS_00057950-exon-scaffold_302-1510915933:56988..57127Clytia hemisphaericaexon
TCONS_00057950-exon-scaffold_302-1510915933:56656..56720TCONS_00057950-exon-scaffold_302-1510915933:56656..56720Clytia hemisphaericaexon
TCONS_00057950-exon-scaffold_302-1510915933:56172..56251TCONS_00057950-exon-scaffold_302-1510915933:56172..56251Clytia hemisphaericaexon
TCONS_00057950-exon-scaffold_302-1510915933:55594..55643TCONS_00057950-exon-scaffold_302-1510915933:55594..55643Clytia hemisphaericaexon
TCONS_00057950-exon-scaffold_302-1491911889:70561..70968TCONS_00057950-exon-scaffold_302-1491911889:70561..70968Clytia hemisphaericaexon
TCONS_00057950-exon-scaffold_302-1491911889:56988..57127TCONS_00057950-exon-scaffold_302-1491911889:56988..57127Clytia hemisphaericaexon
TCONS_00057950-exon-scaffold_302-1491911889:56656..56720TCONS_00057950-exon-scaffold_302-1491911889:56656..56720Clytia hemisphaericaexon
TCONS_00057950-exon-scaffold_302-1491911889:56172..56251TCONS_00057950-exon-scaffold_302-1491911889:56172..56251Clytia hemisphaericaexon
TCONS_00057950-exon-scaffold_302-1491911889:55594..55643TCONS_00057950-exon-scaffold_302-1491911889:55594..55643Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_302supercontigscaffold_302:55594..70968 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.9449	3.59948	9.10585	12.9592	7.81347	6.5249	6.56904	12.064	16.4918	13.2048	10.7296	8.91921	7.06983	13.5068	8.00233	5.75824	14.8821	21.0761	1.25723	3.53872	18.7052	12.9817	10.6082	8.32056	9.71322	8.92863	5.976	1.03874	4.96486	3.67075
Blast
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BLAST of TCONS_00057950 vs. Swiss-Prot (Human)
Match: MAPK2 (MAP kinase-activated protein kinase 2 OS=Homo sapiens GN=MAPKAPK2 PE=1 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 3.122e-58
Identity = 87/153 (56.86%), Postives = 119/153 (77.78%), Query Frame = 1 
Query:  283 LTSKRHAITQDYDVSQKSLGVGINGKVLECYRKKDKGKFALKVLKDSVKARRELDLHWKACECPYVVKIVDVYENRFGKDDCLLVVMECMEGGELFERIQNRADHPFTEREAAATVRMISMAIIHLHTMNIAHRDLKPENLLYVEKSNASLLK 741
            L  K++AI  DY V+ + LG+GINGKVL+ + K+ + KFALK+L+D  KARRE++LHW+A +CP++V+IVDVYEN +    CLL+VMEC++GGELF RIQ+R D  FTEREA+  ++ I  AI +LH++NIAHRD+KPENLLY  K   ++LK
Sbjct:   52 LQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILK 204
The following BLAST results are available for this feature:
BLAST of TCONS_00057950 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MAPK23.122e-5856.86MAP kinase-activated protein kinase 2 OS=Homo sapi... [more]
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