TCONS_00057957 (transcript) - C. hemisphaerica

Overview
NameTCONS_00057957
Unique NameTCONS_00057957
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3045

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00057957 ID=TCONS_00057957|Name=TCONS_00057957|organism=Clytia hemisphaerica|type=transcript|length=3045bp
GAAAGCAAGAAAGATTTATGACTGATCTATAAAAAGGAATTATTGAAAAG
GAGAGAATTAACGTTGCTAACGTCTCCTCTAATTGTATTGGTGTTCAAAG
AAGATTGTCTGTAACTCTTGTACCATCTTACACTTGTTTGTCTGATGGTG
GGGTTGTTAGAGTATCTACATGTGATTTCAACGCAATAAAACATTACAGG
ATAACATACAACACGATATAACATGGTGGATACATTACATACAACATCAC
TGACCAAAGATACCACGACTGGGTTGATGAATTTAAATCAGCTTTTCTTG
GAACTGAAAAACAACTTGATCTCGGTggagaaaatgaataaaatgacTTC
TgctaataataataacaacaactTTGACTCATCTACCGGTCGTATGAAAT
TCCCACGAACTAACACCGCTCCTATTATACGAGCGGTCAAAAAGAAAACA
CGGATCAACATCACAGATTACAATTTCACGCTGCCGACACGTGGGCGAAA
CGGTCGCTCAAGCAGTGCGGACAGTGATGAAGTGGTGGGGCGTTTGAACA
GTTTGATGGATGATTTAGAGACAAGTTTCTCATCCCTTTTGAAATCGAAC
GTTTCCTTAGACACCGATAGTTCAGACGCTGAAAATGATGAAGCCTTCGA
AGTGGCCACCTCACCATCGCAAAAATACGTGCTGGATAATTTCAGTCAAT
ACCTTTATCGCAAATATTCCCTTCGATCGAAGGACTCTCTAAAACCGATA
AAACCTCCTCGTCGAATGTCTGATTCTCGTTTGAACGACTTTCACCGACA
ACAAACGAGAAATTCGTCATCATCTTCCGACAGTGGAGAAGGGATGTTGC
ATAACATAAGCCAACACTCGACACTTTGTCGACGTTTGAAAACTTTGGAA
GCGAGTTTTGGGTTGACGTTGAAAAAGCAGTTGCATTCAGTTATTGTAAA
ACGCATGCGCGAAATGAATGTTTCGGGTTGTGTGTATTGTTTATACGCGC
TCTACGAGAAGCAAAAACGCGATGCTGAAGAAAAAGTCAAACAAATTCGA
AAAACACTTCAAGAACAAGAGCATCTTCAAGAACGCTTACGTCAGCAGAA
AGAGGAATCGGACGCTGACAACGAATGGTTGAAGAGTGAAGACGAGAAAG
CGTACGTTGAAACGGCTTCACAAGGCGATCCTTCTTCACCGACTGATCCT
TCTACTACTGAGCCTTCTACTACTGATGAAGTGGACTCCAAAACGAGGCT
ATCAAAACGACATTCCTATAATGGGGAGAAAACAGAATATGACAAAGACA
GACTTTCCGAAGTATGGGATCGAAAAATGGAACAAACCAAAAACGCAAAA
TCACTGAACCTACGACAATCGACTAACCACCTTCGAAGAAACACACCCTT
CAGAGCCAGTATGCCGCTATGGGCACCGATGGCTTCAACAGACGAGCAAC
GCCCAAAAACACAAGAAGGGCGTCCACTGCCGCCCGTTCCCTCGTCACCA
ACCGAAGTTGAACGCCCAACACAACCTGCGCCTCCGCTCAAAACGAAAAA
CGATAACCCGCCACCACCAAAACCAGAACGATCTTTATCAAGCGAAGCGA
AGGCCTCAAATTCCGACGACGAATATGCGCGCcctcaaaaacataaaaac
gacGACATGGACCCGGCTGCAATGAGACGCTCCAAAACGATAAGTGCTGT
TGACCGGCCTAAATCACGAGACTCGCCCGGCATGCTGCGTAGAAATACGG
AGACGGCACGTTCATCTCGAGCGAAAGAAGTCTTACCTGCAAATGATATC
GTTTATCAACACACGACGAGCGTTGTCAAATCCGTTATCGAGTTCAATAC
GGGCGTCCAACATGCGCAACCTGAAGAATTTGTCGACCTCGTCAAGGTTG
TTGGATTAAATTTACGTGACCTTCTTGCTGAAGTCGATAATGGTGTCCAA
AATATCCCTGAGTCAGCACAAAAAGAGATCGAGATGGCACATAAAGTATT
ATCGAGTGATATGGCAGAACTCGTTGCAAAAATGAAATTGGCACAAAAAT
ACGCAGAAACGACGTTGGGGCAAGAAAATAAACGCCTTATGCTTGCTGCA
GCGCATGCACTAGCTATTGATGCTAAAAATCTGTATGACACTTATTCTAA
AGTTAGAGAAAATAGTTTAAATAATGAGAATAATTTAAGTtaagttttaa
aaagaattattttttataatacGCGTGTAGTGATGATGTGACAAAGAAAA
TTGGAACTGTAAACGAGGAGAATGAAACAAGATTTTCACCACTTCTTTGT
TTAGCGGTGTACGCTGTCTAACCGTAAATTTGaaccaattttctttctca
tttcaTCAGACCACAGTTCAAGCAACCAATCCCTTCAATCCCACTGATAG
CCTGCTTCACGTTTTCATCTTTGATAGAGATTTTTTCTTCACAATATTTT
CAGAGTATCGTAGTCCTAGAAATTATTACACAGATGTGGCCGAGATAATT
TTTACCAACCTTTTTGGTTGGTCGGGAAAATGAAATTAACTATCAAAatc
ttatcttaaaattttgggcaatttcAAACTCTCAGTGCTCTCTCAGCTAA
TTGCAAATCACAACATAGCACCGAGTATGGTTGCTTGAACattgttttta
gatattttgtgatttttgtccTTTTTGTTTATTATCGAATTTTTTTATAT
CTCGTTTTTTTCGGGTTGcttattttgtacttttgatTTATGAAGCTCTT
CTGAATTgaacttttaacttttaagaTAATGAACTACTTTAAGGATTTGG
TTATAGCAAAAagcttttcattaaaaatattttatttctgttTGAATATG
GACATAAACCATTCGAGAATGGCTTCAAAATCATCATTGTAAAATTTTTA
TAGATTTATCTCTCTTGCAATGGTAGACATCCATTTTCTGCTATCGCATG
TGTAACTCTGTCCCTTTTTGGCAAACATTATTGTAAATAAAACCTCTACT
GAGAAAAGATAAGGAAATTATATTaaagccaaaaaaatcaaaatt
Run BLAST on NCBI

transcript from alignment at scaffold_302:111082..119041-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00057957 ID=TCONS_00057957|Name=TCONS_00057957|organism=Clytia hemisphaerica|type=transcript|length=7960bp|location=Sequence derived from alignment at scaffold_302:111082..119041- (Clytia hemisphaerica)
GAAAGCAAGAAAGATTTATGACTGATCTATAAAAAGGAATTATTGAAAAG
GAGAGAATTAACGTTGCTAACGTCTCCTCTAATTGTATTGGTGTTCAAAG
AAGATTGTCTGTAACTCTTGTACCATCTTACACTTGTTTGTCTGATGGTG
GGGTTGTTAGAGTATCTACATGTGATTTCAACGCAATAAAACATTACAGG
ATAACATACAACACGATATAACATGGTGGATACATTACATACAACATCAC
TGACCAAAGATACCACGACTGGGTTGATGAATTTAAATCAGCTTTTCTTG
GAACTGAAAAACAACTTGATCTCGGTGGAGAAAATGAATAAAATGACTTC
TGCTAATAATAATAACAACAACTTTGACTCATCTACCGGTCGTATGAAAT
TCCCACGAACTAACACCGCTCCTATTATACGAGCGGTCAAAAAGAAAACA
CGGATCAACATCACAGATTACAATTTCACGCTGCCGACACGTGGGCGAAA
CGGTCGCTCAAGCAGTGCGGACAGTGATGAAGTGGTGGGGCGTTTGAACA
GTTTGATGGATGATTTAGAGACAAGTTTCTCATCCCTTTTGAAATCGAAC
GTTTCCTTAGACACCGATAGTTCAGACGCTGAAAATGATGAAGCCTTCGA
AGTGGCCACCTCACCATCGCAAAAATACGTGCTGGATAATTTCAGTCAAT
ACCTTTATCGCAAATATTCCCTTCGATCGAAGGACTCTCTAAAACCGATA
AAACCTCCTCGTCGAATGTCTGATTCTCGTTTGAACGACTTTCACCGACA
ACAAACGAGAAATTCGTCATCATCTTCCGACAGTGGAGAAGGGATGTTGC
ATAACATAAGCCAACACTCGACACTTTGTCGACGTTTGAAAACTTTGGAA
GCGAGTTTTGGGTTGACGTTGAAAAAGCAGTTGCATTCAGTTATTGTAAA
ACGCATGCGCGAAATGAATGTTTCGGGTTGTGTGTATTGTTTATACGCGC
TCTACGTAAGTAGTCTTTTGATTTATTATGAGATTAACTCTCAGATTTTT
AAATCACAACTTTCTCACACATACAAATGAACGATAAGTCATAAAGTAAT
AGTTGGCTATCTAGCCTCTGCGGGTTTTATTTTATGTTTATTGTAAATAA
CCTTCATGAAGCCGTCCCGAGACTTCGAAATGGTAACGGGTTGGCAAATA
TATATTCTATGAATACCCTGAACAATAAAAAACCTCAGAATGCAAGCATA
TAATGGTTTTACAGGAAGCGAAAAGGTCTCAAAACGATGGTTGATAAAGT
TTATGAAAGACTTTTATGGAAAGAATTTTTTCTTCTTTTCTTTCCCTTGT
GGGCTCGCATGAAATGAGCTAACAAACAATTTACTAACATGAATGATATC
GTAACTGTTTCAGAACATCCATAACGTTTTAAAATTGGCATCGAAAATAG
CATGAAACTAATTGTTCATTTCCTCTCTTTCTCCATTTATTTTCTATGGA
AGAAGGAGGCGATTCTTTCTTTCGTTTTCCTCCTCCATCAAAACAATGGG
ACATTATAGCTCGTTAGTTTGTTCATTTCTGGATAAAATCTTTTTTAATT
ACCAATTTATCTTAATAAGTTTGAGGGGTGTGGCTGAATTGATACTCGGT
CACATTCATTTTGCCACCATCAAATAAAGCGTTGCAATGATTTGAATGAC
ATCTAGATAAATGTACCTTGGCGAAGGTTCACCCTACAGGCTTTTTTTCC
TATAACAATGATGTTTTTTAAAGAATATCTTAACTTTTTGGGGAGAATCA
TCCTGAAATATCCTATCGGTATTCTTAGGTTTGATCAAACCAAAACTCAG
GCAAAAATTTGGCACATTTGTTGAGCATTGGTACATTGCTCGGTATAATA
ATTTGTTGGCCAGTTTCATTGTAAATATTCTTATAAAGTATATTGTGTAC
CTCAGAAATTTGTAATAAAAGTCCACGTTTGTCTTGAAGTTGATTAAGGC
CTTTCAAAATACCCTTTGTAACCATCATTTCAAATGTCTTTCTCGCACAC
CAGGAGAAGCAAAAACGCGATGCTGAAGAAAAAGTCAAACAAATTCGAAA
AACACTTCAAGAACAAGAGCATCTTCAAGAACGCTTACGTCAGCAGAAAG
AGGAATCGGACGCTGACAACGAATGGTTGAAGAGTGAAGACGAGAAAGCG
TACGTTGAAACGGCTTCACAAGGCGATCCTTCTTCACCGACTGATCCTTC
TACTACTGAGCCTTCTACTACTGATGAAGTGGACTCCAAAACGAGGCTAT
CAAAACGACATTCCTATAATGGGGTAAGTTGCATCATAGAGGTAATAAAA
GTTAGATGGAGTAACAACTTTTCTGTAATAGCCAGAGAAGTCATAAAACC
CTTCAGAAATTTCTTTCAAATCGGCCTCCTTTTATTACCAATCCTTGATA
GCAAAAATCAGTCAAGATATAGATTATAAGAACTAAAGTAAAGTTATTCT
GCCCAACGAAACCTCGTATTTTTAGGTAAAATGCGAGTTTTTTTCGAGTA
ATGATTTCTTTATAGTTTTAAAAGAAGTTTTTATTTTATCGGGAAACTTA
CGAGAGGTAAACTTCTTCAAATTTTGCGAATTCTTTGTTGTTTGTGGAAG
GTTCTTTGCTATAAATATCTTTAGATTTAAAATAGCAGCTGCCTCAAAAT
TTTTATAGAATATAGTTGAAAGATTGGCATTAGTAAATATGTAAAAATTG
ACAAAATTTACCGAGGATTCCCTGAGCAGCGAACATTTCAAATTCGATGT
TCTGTGCTTATTCTTGCAAGGGTTTCTTATGTTTTATCAACGAAACTGTC
ATCACACAATGAACAAATTAAAAATGTAGCGTGATTTTATTCAAATTCTC
TTCGACTCAAGTATTCCCATGAGTGAAAGTAAAATTAATGGCTTTTTCCC
AAAGCAACAAAGCAACAGTTTGCTATCAACGATACAATACAATAGAATAG
TAGGCGTGGTATCTCCATCTATATTTTTATTACCTCCATGGTTTCATCGA
AATCAATTATGTATGAAATGCATAAACAAGCCCTTGTCTGATTCCTAACT
TTTCATCAGAATAAACGCAAATCGAAATGCAAAAAAATGCTATCTAGTGG
GCGTATGAATGAATATTTATACCCATGATAAACAATACCCAATATTGTGA
AAAATACGATCAAAACAGAGTTGAGCAACACTTCTAGTTTCTAACCAACA
TCTTGAAAACTCGAAAGATATTGACCCTCCTCTTCTATAAACGGCACAGA
TGTTTATTTTTGAAGTTCACTTGGCAGTAAAAACACCGCAAACCGCAGAA
ACATTTTCTTATGTTTGTTTATCAGTTTCCTTCTCCAAAATTTCCCACAA
AATTTGATCCGTGTCCGCAACAAATTCGTTTACTTTATAAGCCTACTCTA
CGCTAAATTTCACGTTTTTCACTTAAGATTGGGTATTCAGAGCGTAGACT
TCTAATTTTGATGTTTACGGTTCGCGGTCTTACCTAGAACGCTCGTATTC
AACATTGAGGATGCAACGCATGCGCGCTATATCAACTTGCAGATAAGAAT
TAGCCAATCTTGAGTTTACCGCGATCTTGATAACCAGCTCCTATAGATTT
TAAAGATTTGTATGGACAATTTAGTTTTTTTTTCCGCAAAATTTTTCCCA
ATTTTATCCTAACTTTTTATTTCTCCACTTTGGCACAAGTAGAAGAATAA
GTGTTTCTTACTTCATCAATCAAGGATGAAGGTTTTTTTGGTTGGTTCTG
ACTTTCCTATAATCTAACAACAACCCGGAATTCTATAGCGCATCTCCTCG
CTTCATTTTAGGAGAAAACAGAATATGACAAAGACAGACTTTCCGAAGTA
TGGGATCGAAAAATGGAACAAACCAAAAACGCAAAATGTAAGAGTTTGGA
ATATTCTTTTTATAGAAGTCTTAACATGTATTCTTTAAAGTTTCTGATGA
ACATTTTGCCAGCTATAGAAAATTTCGATTTCTTTATGGTCGTTTGCGAG
ACTCAGTCAGTAATTACAAACACCGGGTTTTTTTCGTTTCCTATTCAGAA
CAAACGAAATTAATTTTCTCATTTTTCCATCTTTAAGCTTTAGCCTGATT
CGCAGACCTCTATGGTTATACTTCATTCTATAAGAAAATTGTCAATTGAG
GATTAGCAGAAGCCAACTTGGGGTTGTTCAAAAGTGGATTAGCGGCCGAT
TAGCTTAATTTTTTATTAAATCTCGATTAGCGCAAAAAATTAAGCTTAAA
TCTGGATTAAATTTCGATTAAATAGGCCAAATTTTAATTCTGGACCATTT
TAACGTGTGTATGTGAAATAGAAAGCTCCAACACTTTAACCATCTTCATC
ACCTTATAACTATAGCACTGAACCTACGACAATCGACTAACCACCTTCGA
AGAAACAGTAAGTGTCCTACTCCCACCCTTCTTCGTCACCTTCCCTCCTA
CCCTTCAACTCCTCTTACCTCATCATCAGCATGCTTCCACCCTCCATTAT
CATGCTACATACTAACCTGAACCCACTTCACATGCTGTACTTCCCTGTCT
TAAACATCCAAACTCATTTCACGCAGCACATACACACTTTGCATTCACAC
TACAATCTATGAACCAACCTTGACACTTTTATTTTCCATTTTCAGCACCC
TTCAGAGCCAGTATGCCGCTATGGGTAAGTGTATTTTGCTCTCTCGTCCG
GTTCTTTGAATTTCAAATATAAAGTCCAATAAATTTCGGGCTCCATCAAA
ATTCGGTAAAAAATAAAAATCTATAATATTTGGAAATCGTGAAAGATATT
TTTTGGCCGATAATACCTTCTCCTAGTTAATAAACAACCGTTTTGGTAGG
GCTGAATGAATATTTGTCATTTTTGTTTGAAAATTCTCATTTTTATCCAA
TGTTTCGCGAGAGTTATTCATAAAATATGTTTTCTTCGAATTTACGAAAG
TGATTTTTCGAATGTCTGCCCCAGAAAGTTTGCTAAAATCGAACGTGCAT
CTTAATTTTTCATCAGGCACCGATGGCTTCAACAGACGAGCAACGCCCAA
AAACACAAGAAGGGCGTCCACTGCCGCCCGTTCCCTCGTCACCAACCGAA
GTTGAACGCCCAACACAACCTGCGCCTCCGCTCAAAACGAAAAACGATAA
CCCGCCACCACCAAAACCAGAACGATCTTTATCAAGCGAAGCGAAGGCCT
CAAATTCCGACGACGAATATGCGCGCCCTCAAAAACATAAAAACGACGAC
ATGGACCCGGCTGCAATGAGACGCTCCAAAACGATAAGTGCTGTTGACCG
GCCTAAATCACGAGACTCGCCCGGCATGCTGCGTAGAAATACGGAGACGG
CACGTTCATCTCGAGCGAAAGAAGTCTTACCTGCAAATGATATCGTTTAT
CAACACACGACGAGCGTTGTCAAATCCGTTATCGAGTTCAATACGGGCGT
CCAACATGCGCAACCTGAAGAATTTGTCGACCTCGTCAAGGTATTTAGCT
TCTTCATTCTCAGAGAATTTGCTTGTATAAAAACTTGGCGTATGCTTTCA
AGCTCATTATATGGAATTTTGATTAAGATAGTCTAGAGGGCCTCGTAAAT
TTTCAATGTTACGAGCAATGATTGAACAACTAATATAAACATGACTTTTG
ANATAATACCTTCTCCTAGTTAATAAACAACCGTTTTGGTAGGGCTGAAT
GAATATTTGTCATTTTTGTTTGAAAATTCTCATTTTTATCCAATGTTTCG
CGAGAGTTATTCATAAAATATGTTTTCTTCGAATTTACGAAAGTGATTTT
TCGACTGTCTGCCCCAGAAAGTTTGCTAAAATCGAACGTGCATCTTAATT
TTTCATCAGGCACCGATGGCTTCAACAGACGAGCAACGCCCAAAAACACA
AGAAGGGCGTCCACTGCCGCCCGTTCCCTCGTCACCAACCGAAGTTGAAC
GCCCAACACAACCTGCGCCTCCGCTCAAAACGAAAAACGATAACCCGCCA
CCACCAAAACCAGAACGATCTTTATCAAGCGAAGCGAAGGCCTCAAATTC
CGACGACGAATATGCGCGCCCTCAAAAACATAAAAACGACGACATGGACC
CGGCTGCAATGAGACGCTCCAAAACGATAAGTGCTGTTGACCGGCCTAAA
TCACGAGACTCGCCCGGCATGCTGCGTAGAAATACGGAGACGGCACGTTC
ATCTCGAGCGAAAGAAGTCTTACCTGCAAATGATATCGTTTATCAACACA
CGACGAGCGTTGTCAAATCCGTTATCGAGTTCAATACGGGCGTCCAACAT
GCGCAACCTGAAGAATTTGTCGACCTCGTCAAGGTATTTAGCTTCTTCAT
TCTCAGGGAATTTGCTTGTATAAAAACTTGGCGTATGCTTTTCAAGCTCA
TTATATGGAATTTTGATTAAGATCTAGAGGGTCTAGAGGGCCTCGTAAAT
TTTCAATGTAACGAGCAATGATTGAACAACTAATATAAACATGACTGTTG
AATATTCAGGTTGTTGGATTAAATTTACGTGACCTTCTTGCTGAAGTCGA
TAATGGTGTCCAAAATATCCCTGAGTCAGCACAAAAAGAGGTAAGTAAAC
ATTAGTTATAAGTAATTGCTGTAAAGAATTTATAATAAATTGAAACTATC
TGATATTCTGTCGGGTTCAGCTGCTCCTACCCGTTTAGACAGCATAGTTA
GACGTAGACAATCCCCAAAACGTGGGTAAATCTACGGTCGGGTGAAATTC
TGTAATACAATTCTTGTAGATTGAAAATTTTCCAGATTTTCAGAGCTTTA
GCTCTACATCATATTATTATATTTTAAAACCTACCCTTTCAGATCGAGAT
GGCACATAAAGTATTATCGAGTGATATGGCAGAACTCGTTGCAAAAATGA
AATTGGCACAAAAATACGCAGAAACGACGTTGGGGCAAGAAAATAAACGC
CTTATGCTTGCTGCAGCGCATGCACTAGCTATTGATGCTAAAAATCTGTA
TGACACTTATTCTAAAGTTAGAGAAAATAGTTTAAATAATGAGAATAATT
TAAGTTAAGTTTTAAAAAGAATTATTTTTTATAATACGCGTGTAGTGATG
ATGTGACAAAGAAAATTGGAACTGTAAACGAGGAGAATGAAACAAGATTT
TCACCACTTCTTTGTTTAGCGGTGTACGCTGTCTAACCGTAAATTTGAAC
CAATTTTCTTTCTCATTTCATCAGACCACAGTTCAAGCAACCAATCCCTT
CAATCCCACTGATAGCCTGCTTCACGTTTTCATCTTTGATAGAGATTTTT
TCTTCACAATATTTTCAGAGTATCGTAGTCCTAGAAATTATTACACAGAT
GTGGCCGAGATAATTTTTACCAACCTTTTTGGTTGGTCGGGAAAATGAAA
TTAACTATCAAAATCTTATCTTAAAATTTTGGGCAATTTCAAACTCTCAG
TGCTCTCTCAGCTAATTGCAAATCACAACATAGCACCGAGTATGGTTGCT
TGAACATTGTTTTTAGATATTTTGTGATTTTTGTCCTTTTTGTTTATTAT
CGAATTTTTTTATATCTCGTTTTTTTCGGGTTGCTTATTTTGTACTTTTG
ATTTATGAAGCTCTTCTGAATTGAACTTTTAACTTTTAAGATAATGAACT
ACTTTAAGGATTTGGTTATAGCAAAAAGCTTTTCATTAAAAATATTTTAT
TTCTGTTTGAATATGGACATAAACCATTCGAGAATGGCTTCAAAATCATC
ATTGTAAAATTTTTATAGATTTATCTCTCTTGCAATGGTAGACATCCATT
TTCTGCTATCGCATGTGTAACTCTGTCCCTTTTTGGCAAACATTATTGTA
AATAAAACCTCTACTGAGAAAAGATAAGGAAATTATATTAAAGCCAAAAA
AATCAAAATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036536XLOC_036536Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00057957-exon-scaffold_302-1575043694:118037..119041TCONS_00057957-exon-scaffold_302-1575043694:118037..119041Clytia hemisphaericaexon
TCONS_00057957-exon-scaffold_302-1575043694:116719..116988TCONS_00057957-exon-scaffold_302-1575043694:116719..116988Clytia hemisphaericaexon
TCONS_00057957-exon-scaffold_302-1575043694:115105..115180TCONS_00057957-exon-scaffold_302-1575043694:115105..115180Clytia hemisphaericaexon
TCONS_00057957-exon-scaffold_302-1575043694:114585..114626TCONS_00057957-exon-scaffold_302-1575043694:114585..114626Clytia hemisphaericaexon
TCONS_00057957-exon-scaffold_302-1575043694:114318..114346TCONS_00057957-exon-scaffold_302-1575043694:114318..114346Clytia hemisphaericaexon
TCONS_00057957-exon-scaffold_302-1575043694:112659..113132TCONS_00057957-exon-scaffold_302-1575043694:112659..113132Clytia hemisphaericaexon
TCONS_00057957-exon-scaffold_302-1575043694:112402..112482TCONS_00057957-exon-scaffold_302-1575043694:112402..112482Clytia hemisphaericaexon
TCONS_00057957-exon-scaffold_302-1575043694:111082..112149TCONS_00057957-exon-scaffold_302-1575043694:111082..112149Clytia hemisphaericaexon
TCONS_00057957-exon-scaffold_302-1510915933:118037..119041TCONS_00057957-exon-scaffold_302-1510915933:118037..119041Clytia hemisphaericaexon
TCONS_00057957-exon-scaffold_302-1510915933:116719..116988TCONS_00057957-exon-scaffold_302-1510915933:116719..116988Clytia hemisphaericaexon
TCONS_00057957-exon-scaffold_302-1510915933:115105..115180TCONS_00057957-exon-scaffold_302-1510915933:115105..115180Clytia hemisphaericaexon
TCONS_00057957-exon-scaffold_302-1510915933:114585..114626TCONS_00057957-exon-scaffold_302-1510915933:114585..114626Clytia hemisphaericaexon
TCONS_00057957-exon-scaffold_302-1510915933:114318..114346TCONS_00057957-exon-scaffold_302-1510915933:114318..114346Clytia hemisphaericaexon
TCONS_00057957-exon-scaffold_302-1510915933:112659..113132TCONS_00057957-exon-scaffold_302-1510915933:112659..113132Clytia hemisphaericaexon
TCONS_00057957-exon-scaffold_302-1510915933:112402..112482TCONS_00057957-exon-scaffold_302-1510915933:112402..112482Clytia hemisphaericaexon
TCONS_00057957-exon-scaffold_302-1510915933:111082..112149TCONS_00057957-exon-scaffold_302-1510915933:111082..112149Clytia hemisphaericaexon
TCONS_00057957-exon-scaffold_302-1491911889:118037..119041TCONS_00057957-exon-scaffold_302-1491911889:118037..119041Clytia hemisphaericaexon
TCONS_00057957-exon-scaffold_302-1491911889:116719..116988TCONS_00057957-exon-scaffold_302-1491911889:116719..116988Clytia hemisphaericaexon
TCONS_00057957-exon-scaffold_302-1491911889:115105..115180TCONS_00057957-exon-scaffold_302-1491911889:115105..115180Clytia hemisphaericaexon
TCONS_00057957-exon-scaffold_302-1491911889:114585..114626TCONS_00057957-exon-scaffold_302-1491911889:114585..114626Clytia hemisphaericaexon
TCONS_00057957-exon-scaffold_302-1491911889:114318..114346TCONS_00057957-exon-scaffold_302-1491911889:114318..114346Clytia hemisphaericaexon
TCONS_00057957-exon-scaffold_302-1491911889:112659..113132TCONS_00057957-exon-scaffold_302-1491911889:112659..113132Clytia hemisphaericaexon
TCONS_00057957-exon-scaffold_302-1491911889:112402..112482TCONS_00057957-exon-scaffold_302-1491911889:112402..112482Clytia hemisphaericaexon
TCONS_00057957-exon-scaffold_302-1491911889:111082..112149TCONS_00057957-exon-scaffold_302-1491911889:111082..112149Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_302supercontigscaffold_302:111082..119041 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0668101	4.24108	0.020452	2.12392	27.2637	12.943	15.9034	15.7096	11.592	18.595	0.139679	8.3667	19.9211	15.3648	5.91258	7.29477	13.0118	17.3137	0.115333	4.16991	13.1406	16.5739	23.1547	24.0892	12.487	7.79583	136.39	134.988	42.9985	42.2977
Blast
[Close]
BLAST of TCONS_00057957 vs. Swiss-Prot (Human)
Match: FAK1 (Focal adhesion kinase 1 OS=Homo sapiens GN=PTK2 PE=1 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 3.424e-23
Identity = 53/99 (53.54%), Postives = 73/99 (73.74%), Query Frame = 1 
Query: 1789 ANDIVYQHTTSVVKSVIEFNTGVQHAQPEEFVDLVKVVGLNLRDLLAEVDNGVQNIPESAQKEIEMAHKVLSSDMAELVAKMKLAQKYAETTLGQENKR 2085
            +ND VY++ T +VK+VIE ++ +Q A PEE+V +VK VGL LR LLA VD  +  +P S  +EIEMA K+L+SD+ EL+ KMKLAQ+Y  T+L QE K+
Sbjct:  920 SNDKVYENVTGLVKAVIEMSSKIQPAPPEEYVPMVKEVGLALRTLLATVDETIPLLPASTHREIEMAQKLLNSDLGELINKMKLAQQYVMTSLQQEYKK 1018
The following BLAST results are available for this feature:
BLAST of TCONS_00057957 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FAK13.424e-2353.54Focal adhesion kinase 1 OS=Homo sapiens GN=PTK2 PE... [more]
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