TCONS_00058000 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058000
Unique NameTCONS_00058000
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length158

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058000 ID=TCONS_00058000|Name=TCONS_00058000|organism=Clytia hemisphaerica|type=transcript|length=158bp
TCTCTTCGAAGGATCAGTTGGTATCTGATAGTAACTCTTATcaggatttt
tcaaattattgttATGACAATAAGTGACACAACAGTTTTTTGGCATCTTG
AGATAGTCAGTTCCACACAATTTCAGGCCAAAACTGCTTGAACAGGCTTG
AACGATAT
Run BLAST on NCBI

transcript from alignment at scaffold_302:317323..317480

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058000 ID=TCONS_00058000|Name=TCONS_00058000|organism=Clytia hemisphaerica|type=transcript|length=158bp|location=Sequence derived from alignment at scaffold_302:317323..317480 (Clytia hemisphaerica)
ATATCGTTCAAGCCTGTTCAAGCAGTTTTGGCCTGAAATTGTGTGGAACT
GACTATCTCAAGATGCCAAAAAACTGTTGTGTCACTTATTGTCATaacaa
taatttgaaaaatcctgATAAGAGTTACTATCAGATACCAACTGATCCTT
CGAAGAGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036556XLOC_036556Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058000-exon-scaffold_302-1491911889:317323..317480TCONS_00058000-exon-scaffold_302-1491911889:317323..317480Clytia hemisphaericaexon
TCONS_00058000-exon-scaffold_302-1510915933:317323..317480TCONS_00058000-exon-scaffold_302-1510915933:317323..317480Clytia hemisphaericaexon
TCONS_00058000-exon-scaffold_302-1575043694:317323..317480TCONS_00058000-exon-scaffold_302-1575043694:317323..317480Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_302supercontigscaffold_302:317323..317480 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00058000 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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