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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00058058 ID=TCONS_00058058|Name=TCONS_00058058|organism=Clytia hemisphaerica|type=transcript|length=1243bp
CAAAAGTAGTATTTGCTTTAAGAGTTATGGCCCTTTGGAGTACTGTCGGT
ATTTTGACACCTATACTACAACTAGGTCAACCCATCTATGCTGAAATCTA
AATCGATTTATGTGCTTCCCAATTAGTGTGCGTTACTTGTCACTGTAACT
TCGGCAATTTATCTACTGACTTTTGAGTGACGGTCAATTTGAGTTTCAAG
CTTAACAACAAAATCTACCGTACCACGGATCTGCTACAGTCATTTGATAG
TAACTTTgattttcattctttatttaGCGTACCATCGCCAATGTTGATGG
TTGTTACCATTATGAGCTGTTTACAGAGAGCGTGCTGCTTGAGAGTCGTG
AAGAGGAAAACAAGAACCaccttttttatcaaatttaacaATTCATAAAA
TGATATACGTTACGAAATATATACAACATTAAAAAAgtggccaaaaataa
aaaatgaggcCATTGATCTTTACAATCAAATTAATGAATAGACTGTAACT
TCGttggtctttcttttctttctattggcgttttttttttcattctcttA
CTCACACGCCACTGTCTCAATGCCGCCCCGGTGAAGATTTTTTCCTTCAG
TGtggataaaaatgagaagtAAAGTCATTTGGTTGTTTTAAAGTGGGTTA
AAACTTCAGGTTATTTTTTCCACCGACGACTAttttttggctaaattttc
cagtggggcggaGGCTGGCGGAGTGCTCCACCGGATCTCTGATACGAGGG
TATTCTCCAGAGGGTTTCCAGATTCTCGCCCTCACCAATGGATGTGTATC
AATATGATATTACGACGTTGGAAAATGTAGAAAATACACGTTTCACCTGG
ATAAATGATCGCAATTGTATTcccataaaaatgaaaactgaaaagaaaaa
aaagaaatagcgAGGGAAGGATTGTTGTGATTCATCCAATCTAGACCGCT
GGAGAACTAAAAATAAACAGAGTGGCAAGATCAGGATTCTGAAACATCGT
TATCACAATGCCCGTATTCTAAGTTTTGTATAGTATTATTCCGCATCCGA
AAATCGAAATTATGGCCGCGTGGATAAATTCCTTCTCCTATTCCAGAGCA
CAAGGAGAACGCGTGTTTAATTAAATTCCAAATCAAAAtacatagtcgaa
cgtgcgcaacgcactgggctcaacttcagtggcttcaaatcattcatagg
cccaattgtagacccccagatattcacccaatgaacaagtgtg Run BLAST on NCBI transcript from alignment at scaffold_304:274155..275397- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00058058 ID=TCONS_00058058|Name=TCONS_00058058|organism=Clytia hemisphaerica|type=transcript|length=1243bp|location=Sequence derived from alignment at scaffold_304:274155..275397- (Clytia hemisphaerica)
CAAAAGTAGTATTTGCTTTAAGAGTTATGGCCCTTTGGAGTACTGTCGGT
ATTTTGACACCTATACTACAACTAGGTCAACCCATCTATGCTGAAATCTA
AATCGATTTATGTGCTTCCCAATTAGTGTGCGTTACTTGTCACTGTAACT
TCGGCAATTTATCTACTGACTTTTGAGTGACGGTCAATTTGAGTTTCAAG
CTTAACAACAAAATCTACCGTACCACGGATCTGCTACAGTCATTTGATAG
TAACTTTGATTTTCATTCTTTATTTAGCGTACCATCGCCAATGTTGATGG
TTGTTACCATTATGAGCTGTTTACAGAGAGCGTGCTGCTTGAGAGTCGTG
AAGAGGAAAACAAGAACCACCTTTTTTATCAAATTTAACAATTCATAAAA
TGATATACGTTACGAAATATATACAACATTAAAAAAGTGGCCAAAAATAA
AAAATGAGGCCATTGATCTTTACAATCAAATTAATGAATAGACTGTAACT
TCGTTGGTCTTTCTTTTCTTTCTATTGGCGTTTTTTTTTTCATTCTCTTA
CTCACACGCCACTGTCTCAATGCCGCCCCGGTGAAGATTTTTTCCTTCAG
TGTGGATAAAAATGAGAAGTAAAGTCATTTGGTTGTTTTAAAGTGGGTTA
AAACTTCAGGTTATTTTTTCCACCGACGACTATTTTTTGGCTAAATTTTC
CAGTGGGGCGGAGGCTGGCGGAGTGCTCCACCGGATCTCTGATACGAGGG
TATTCTCCAGAGGGTTTCCAGATTCTCGCCCTCACCAATGGATGTGTATC
AATATGATATTACGACGTTGGAAAATGTAGAAAATACACGTTTCACCTGG
ATAAATGATCGCAATTGTATTCCCATAAAAATGAAAACTGAAAAGAAAAA
AAAGAAATAGCGAGGGAAGGATTGTTGTGATTCATCCAATCTAGACCGCT
GGAGAACTAAAAATAAACAGAGTGGCAAGATCAGGATTCTGAAACATCGT
TATCACAATGCCCGTATTCTAAGTTTTGTATAGTATTATTCCGCATCCGA
AAATCGAAATTATGGCCGCGTGGATAAATTCCTTCTCCTATTCCAGAGCA
CAAGGAGAACGCGTGTTTAATTAAATTCCAAATCAAAATACATAGTCGAA
CGTGCGCAACGCACTGGGCTCAACTTCAGTGGCTTCAAATCATTCATAGG
CCCAATTGTAGACCCCCAGATATTCACCCAATGAACAAGTGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00058058-exon-scaffold_304-1575043694:274155..275397 | TCONS_00058058-exon-scaffold_304-1575043694:274155..275397 | Clytia hemisphaerica | exon |
| TCONS_00058058-exon-scaffold_304-1510915933:274155..275397 | TCONS_00058058-exon-scaffold_304-1510915933:274155..275397 | Clytia hemisphaerica | exon |
| TCONS_00058058-exon-scaffold_304-1491911889:274155..275397 | TCONS_00058058-exon-scaffold_304-1491911889:274155..275397 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_304 | supercontig | scaffold_304:274155..275397 - |
Blast
The following BLAST results are available for this feature:
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