TCONS_00058068 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058068
Unique NameTCONS_00058068
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length183

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058068 ID=TCONS_00058068|Name=TCONS_00058068|organism=Clytia hemisphaerica|type=transcript|length=183bp
CACAGGAAATGGGCTAGATCGGTGCCCCATTGAAAAAAGACGCAACCGTC
AAATCTACATAACAACAAGAAACAGAGTGCATCGCATGATGACAAGAGCT
CGTCGAAACTACGAACAAAACATTTGCAACAAAGCCAAGTCCAATCCGAA
AGTTTTCTGGTCACACGTGCGAAGTAAGATGNN
Run BLAST on NCBI

transcript from alignment at scaffold_304:61867..62049

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058068 ID=TCONS_00058068|Name=TCONS_00058068|organism=Clytia hemisphaerica|type=transcript|length=183bp|location=Sequence derived from alignment at scaffold_304:61867..62049 (Clytia hemisphaerica)
NNCATCTTACTTCGCACGTGTGACCAGAAAACTTTCGGATTGGACTTGGC
TTTGTTGCAAATGTTTTGTTCGTAGTTTCGACGAGCTCTTGTCATCATGC
GATGCACTCTGTTTCTTGTTGTTATGTAGATTTGACGGTTGCGTCTTTTT
TCAATGGGGCACCGATCTAGCCCATTTCCTGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036592XLOC_036592Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058068-exon-scaffold_304-1491911889:61867..62049TCONS_00058068-exon-scaffold_304-1491911889:61867..62049Clytia hemisphaericaexon
TCONS_00058068-exon-scaffold_304-1510915933:61867..62049TCONS_00058068-exon-scaffold_304-1510915933:61867..62049Clytia hemisphaericaexon
TCONS_00058068-exon-scaffold_304-1575043694:61867..62049TCONS_00058068-exon-scaffold_304-1575043694:61867..62049Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_304supercontigscaffold_304:61867..62049 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00058068 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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