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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00058093 ID=TCONS_00058093|Name=TCONS_00058093|organism=Clytia hemisphaerica|type=transcript|length=271bp
AGGATTTTCTCTTGGTTATGCTCGAGCTGAGGTTTAAACGCTTTATATAT
TTCCTCTTCTATTGTAGGGTCAGTGCTAACTTGGTGGGCAATAGCTGCTT
CAATGATGTCGATAACCTCATGATGGCGATTTATTTCATCTTCAAGGTCA
AAGATCTTCTGGAAGACTTACGTATCATTACGTATTGTTCACAAAGGTGA
CTACAGCACTTGGAAGATCAGGAATGAAGCCCCATGCAGCAGAACCAACT
ACGTGGACGCCCTTCTTGTCC Run BLAST on NCBI transcript from alignment at scaffold_305:227711..229494- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00058093 ID=TCONS_00058093|Name=TCONS_00058093|organism=Clytia hemisphaerica|type=transcript|length=1784bp|location=Sequence derived from alignment at scaffold_305:227711..229494- (Clytia hemisphaerica)
AGGATTTTCTCTTGGTTATGCTCGAGCTGAGGTTTAAACGCTTTATATAT
TTCCTCTTCTATTGTAGGGTCAGTGCTAACTTGGTGGGCAATAGCTGCTT
CAATGATGTCGATAACCTCATGATGGCGATTTATTTCATCTTCAAGGTCA
AAGATCTTCTGGTGAGTGGAAATAATACTCTCATCACATTCTCCTTTTGC
AGCTGCCATTTTAAGGTCAATCAACTAAAAAGAATATTAAGGTTATTCTG
GGTTATTCCAGGTTATTCATCATAAATTTTTAAGTTGATTTTTCATCAAT
TTCCTTAGGGGGCTGTCCACATAGTACGTACACATAAGGGGAGAGGGGTC
TTCTCAAAAACGTATGCTTGCGTACAGGGGAGGGGAGGGCTCAAAGGAAA
ATGTATGCAGATATAATATTTTTCATAATCCTATTTTGCTTGTTTTTGTC
TACTTTAATCCTTCTTTTACGCATCAAGGAAAATAAAAAGTTACCAATGC
TCACCTCACAGTTTTTTCCAATAGATTGAAAAACTTTTTGAAGGTTCCCA
ACGATATATGGAGAGCTGGCAGTGCAACCTAAAGAGAATTTCAATATACT
TTTTTCAGAATTTGGCAAAAATATCTTTGTTTACTCAAACTAAGGGCTCT
TTGGTTTTGTTCCCTTCGATGGGCTAGCAAAAAGAATTCTAGTTACCTGA
TCAAGTGGAATGTTGAATAATCGTTTTCCTATCACGTTTTTACACAATTT
TGCATGTTTCAGATCTCCCTTGTAGGTCTCTACAAATTTCTTCAGATTTT
CATCCAAAGAGGCAAGTGCTCTTGGCTTGTTGTAGCGTTCGTCTTTGGGA
ATTTTTAGATCAGATTGTTTGATGTCACACAACAAGCATGGGTACTTTCC
TGAAAAAAGAAAAACTTTAGTTGTACACATAATTTGTTGATGAAACAAAA
AAGATTTTCATGGTGGACAATTGAAATTGGGCTTTTACAGTTAATAATAG
TTAATACAGGTTAATACTTACCACTTGCTCCTGTCAACCCATAAGCTGCA
CACAAAAACTCATAGTCACCAGTAAAGGGGTGATCACTGTAAAAGAAATT
TATAGTCTCAAAATTTTGATTATTGTTTTGGACCGGCTCTCTGTAATGAT
TGAGATGAGAATTTGATTCATAAGGTCTCCTGGGGAATCCAATTTTAAAG
CTGCGAGTTTTCTGAAATATCAAATTTGCTTTAAACAGATAGAAATATTG
TTAAAGACTCACTTCCATTTCATTTCTTGCAATTGGTCAACCTGACTCGT
AAACATACTGAGACCTGTTCGTAGGTTTGGACGTTTATCCTTTGCTTCAA
ACAAGGAAAATACAACTGTATTGTCCTTGCTGTTAGGATTCACAGTGTTG
CAGACTTGATAACAGGCTTTGAACGACTTTCCTCCATGGTCACCGCCAAT
CTTGATATGAATTTCATCATCCATCTGTGGATGATGTACNGTCACCGCCA
ATCTTGATATGAATTTCATGATCCATCTGTGGATGATGTACCAATCTGCC
TTCCCTAAACATAAATATTTGTACCTGATTTTCAAAAGCTCTTTTTGAAT
TTTAGACATTAGAGAATTTCAAGATATTTACCATTTATATATTTTCTTTC
ATAAAAAATGTCCTTTTTCTTCAGGAAGACTTACGTATCATTACGTATTG
TTCACAAAGGTGACTACAGCACTTGGAAGATCAGGAATGAAGCCCCATGC
AGCAGAACCAACTACGTGGACGCCCTTCTTGTCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00058093-exon-scaffold_305-1575043694:229334..229494 | TCONS_00058093-exon-scaffold_305-1575043694:229334..229494 | Clytia hemisphaerica | exon |
| TCONS_00058093-exon-scaffold_305-1575043694:227711..227820 | TCONS_00058093-exon-scaffold_305-1575043694:227711..227820 | Clytia hemisphaerica | exon |
| TCONS_00058093-exon-scaffold_305-1510915933:229334..229494 | TCONS_00058093-exon-scaffold_305-1510915933:229334..229494 | Clytia hemisphaerica | exon |
| TCONS_00058093-exon-scaffold_305-1510915933:227711..227820 | TCONS_00058093-exon-scaffold_305-1510915933:227711..227820 | Clytia hemisphaerica | exon |
| TCONS_00058093-exon-scaffold_305-1491911889:229334..229494 | TCONS_00058093-exon-scaffold_305-1491911889:229334..229494 | Clytia hemisphaerica | exon |
| TCONS_00058093-exon-scaffold_305-1491911889:227711..227820 | TCONS_00058093-exon-scaffold_305-1491911889:227711..227820 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_305 | supercontig | scaffold_305:227711..229494 - |
Blast
The following BLAST results are available for this feature:
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