TCONS_00058107 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058107
Unique NameTCONS_00058107
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length138

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058107 ID=TCONS_00058107|Name=TCONS_00058107|organism=Clytia hemisphaerica|type=transcript|length=138bp
AGTGATCAGAATGAATCTCATGTCTGAAAGATTTTCTGTCGAAATAAACT
TATCAATAATGGCTTTGATTAAGTCTGTTGTGAGAGGCTCTTTACGCATT
CTTTTTGGATTTCCATCTTTGGACTAAACTAGTCGTTT
Run BLAST on NCBI

transcript from alignment at scaffold_305:168538..168675

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058107 ID=TCONS_00058107|Name=TCONS_00058107|organism=Clytia hemisphaerica|type=transcript|length=138bp|location=Sequence derived from alignment at scaffold_305:168538..168675 (Clytia hemisphaerica)
AAACGACTAGTTTAGTCCAAAGATGGAAATCCAAAAAGAATGCGTAAAGA
GCCTCTCACAACAGACTTAATCAAAGCCATTATTGATAAGTTTATTTCGA
CAGAAAATCTTTCAGACATGAGATTCATTCTGATCACT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036620XLOC_036620Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058107-exon-scaffold_305-1491911889:168538..168675TCONS_00058107-exon-scaffold_305-1491911889:168538..168675Clytia hemisphaericaexon
TCONS_00058107-exon-scaffold_305-1510915933:168538..168675TCONS_00058107-exon-scaffold_305-1510915933:168538..168675Clytia hemisphaericaexon
TCONS_00058107-exon-scaffold_305-1575043694:168538..168675TCONS_00058107-exon-scaffold_305-1575043694:168538..168675Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_305supercontigscaffold_305:168538..168675 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00058107 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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