TCONS_00058108 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058108
Unique NameTCONS_00058108
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length128

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058108 ID=TCONS_00058108|Name=TCONS_00058108|organism=Clytia hemisphaerica|type=transcript|length=128bp
CAGCAAGACTTTTGAGGAAAGTCCAAGcttgaaaaagaagacttttCCCA
CTTCCAGTTGGTTGACCAACAAAGCAATCTTTtcctttcaacaaattttt
gaaaaacttctttCTGGTAGTCCTTTAT
Run BLAST on NCBI

transcript from alignment at scaffold_305:169636..169763

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058108 ID=TCONS_00058108|Name=TCONS_00058108|organism=Clytia hemisphaerica|type=transcript|length=128bp|location=Sequence derived from alignment at scaffold_305:169636..169763 (Clytia hemisphaerica)
ATAAAGGACTACCAGaaagaagtttttcaaaaatttgttgaaaggaAAAG
ATTGCTTTGTTGGTCAACCAACTGGAAGTGGGaaaagtcttctttttcaa
gCTTGGACTTTCCTCAAAAGTCTTGCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036621XLOC_036621Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058108-exon-scaffold_305-1491911889:169636..169763TCONS_00058108-exon-scaffold_305-1491911889:169636..169763Clytia hemisphaericaexon
TCONS_00058108-exon-scaffold_305-1510915933:169636..169763TCONS_00058108-exon-scaffold_305-1510915933:169636..169763Clytia hemisphaericaexon
TCONS_00058108-exon-scaffold_305-1575043694:169636..169763TCONS_00058108-exon-scaffold_305-1575043694:169636..169763Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_305supercontigscaffold_305:169636..169763 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00058108 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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