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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00058110 ID=TCONS_00058110|Name=TCONS_00058110|organism=Clytia hemisphaerica|type=transcript|length=879bp
CAGGAGTAATATTTATCTTTCATTATTGAACCTTTGTCAGATTGTTTTGA
GAATCAAAAATGTAGTTATAATATGATAATGAAAACAGGTTCAGAACTAT
AACAATATTTTACATATATGAACCAAACACTAAACCAGTTAATCAATAGT
AAATGAATTACATCAAACTGTCTCCCTCAAATAACTGACTGGTACTTTTT
AAACGAGAATGTGGAAAGTAACACCCAATTCACGGTCTAGTATATACAGT
CAACAGTTATTTACAGTTAATTACAAAAAACTGATCAATATATAAATTCA
CAATTTTTCAATTAGCTATTAAACAACTATATTGATTCTAATTGATCGAT
CGAATGTCATCGATGAAACAGCCATAGTTGATAACCAATTTTATCGAATT
TCAACCATCTGGAAGgtattgatttattgattatGGATTAAAAGCAATCA
ATATGCACAATAATTAATTTATCAATAGTCAATCAAAGACTTGTGTTTGC
CAGTCTTCCATTATATTCTCGATTATAGCTTATGTTTGAGTGATCCAACA
AGATAAAATTCTTCCTAATCCCTAGCCAGGATGAGGATCGGGCTCCAACT
ATATATATTTAATGACAAATGATGGCGAGAAAGCCAGGTTACACCTACAC
ACCCTTTTTCCCATAATGTTATGATATGAAGCGACACATAATTTCCTCTT
TTTCCCATCTATAAGAATGTGTGACGAATTAAAACACGGGTGCCAACATT
AGACCATCCTTACGATACCactacttttaaaaatatttagatttattttt
taGTTTATATCTGGGAAAATGTATATACAGTATGTATTATACCCTTTGGA
TAAATTTATAGAAAATAGatgaatttttt Run BLAST on NCBI transcript from alignment at scaffold_305:232461..233339 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00058110 ID=TCONS_00058110|Name=TCONS_00058110|organism=Clytia hemisphaerica|type=transcript|length=879bp|location=Sequence derived from alignment at scaffold_305:232461..233339 (Clytia hemisphaerica)
aaaaaattcatCTATTTTCTATAAATTTATCCAAAGGGTATAATACATAC
TGTATATACATTTTCCCAGATATAAACtaaaaaataaatctaaatatttt
taaaagtagtGGTATCGTAAGGATGGTCTAATGTTGGCACCCGTGTTTTA
ATTCGTCACACATTCTTATAGATGGGAAAAAGAGGAAATTATGTGTCGCT
TCATATCATAACATTATGGGAAAAAGGGTGTGTAGGTGTAACCTGGCTTT
CTCGCCATCATTTGTCATTAAATATATATAGTTGGAGCCCGATCCTCATC
CTGGCTAGGGATTAGGAAGAATTTTATCTTGTTGGATCACTCAAACATAA
GCTATAATCGAGAATATAATGGAAGACTGGCAAACACAAGTCTTTGATTG
ACTATTGATAAATTAATTATTGTGCATATTGATTGCTTTTAATCCataat
caataaatcaatacCTTCCAGATGGTTGAAATTCGATAAAATTGGTTATC
AACTATGGCTGTTTCATCGATGACATTCGATCGATCAATTAGAATCAATA
TAGTTGTTTAATAGCTAATTGAAAAATTGTGAATTTATATATTGATCAGT
TTTTTGTAATTAACTGTAAATAACTGTTGACTGTATATACTAGACCGTGA
ATTGGGTGTTACTTTCCACATTCTCGTTTAAAAAGTACCAGTCAGTTATT
TGAGGGAGACAGTTTGATGTAATTCATTTACTATTGATTAACTGGTTTAG
TGTTTGGTTCATATATGTAAAATATTGTTATAGTTCTGAACCTGTTTTCA
TTATCATATTATAACTACATTTTTGATTCTCAAAACAATCTGACAAAGGT
TCAATAATGAAAGATAAATATTACTCCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00058110-exon-scaffold_305-1491911889:232461..233339 | TCONS_00058110-exon-scaffold_305-1491911889:232461..233339 | Clytia hemisphaerica | exon |
| TCONS_00058110-exon-scaffold_305-1510915933:232461..233339 | TCONS_00058110-exon-scaffold_305-1510915933:232461..233339 | Clytia hemisphaerica | exon |
| TCONS_00058110-exon-scaffold_305-1575043694:232461..233339 | TCONS_00058110-exon-scaffold_305-1575043694:232461..233339 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_305 | supercontig | scaffold_305:232461..233339 . |
Blast
The following BLAST results are available for this feature:
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