TCONS_00058151 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058151
Unique NameTCONS_00058151
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2201

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058151 ID=TCONS_00058151|Name=TCONS_00058151|organism=Clytia hemisphaerica|type=transcript|length=2201bp
AGtaccataatttcaaaaattttccggcccgtcggccccaaccatggtgg
ggcctccttagtcactatatcaTTTAGCCCTTTCACTTTTAAAaccgatt
cgccggccctgGCAATATATTGTCCTCTATCTGGCTATGCTACCCTCTTt
actggttcttttaaaaaAGTAAAAAAATAAAGGATTTTGACAGCGACCAA
TCATAATGTGTTCTTGTTTTCGCTTCATGCAATATGTTGTCAGTGTGTTG
GTCTTATTAAGTGCAGGAGCCTTCATTCTATGTGGAGTGGTTAATTACTG
GTGGGTTACTGACAATGTCATCATCACAACAGAAACAGGTTTATGGAAAT
CATGCACAAAGACTCTTCTGACCGGCAGAACCTGTTATCAAAGAGgaaat
ttatttgaatttgCCGAAGTCTTTGGCAGCCAAACACCGATGCaTAAAGA
CATAATCATCATTGCGTTGATCGTTGCAGTGGTTACCGGTCTCATTCATT
TGATTTGTATGTCAGTCACCATGTGTCAACGGTATCCTGCCAAATCCACC
ATCCTCATTGGTACCATTTTTCTGTTCTTCGGAgTTGCTTCATCTGTCTT
CGGCACAATTTGGGCGTTAGTTCAAATTTCACATGAAAACCAAGGGTGGG
CTTTTTACGCCCTTTACGGTGGTGATGGTGCTATTATACTAGCTTTCATT
TTCTCAATTGTCCTGTTGTGTTCGCGTGCACCAGGTGCTTACCGCGCGAC
CAATAGAGATGATGAAATTGCAATGATTCCGCATTAAATCAAAATTGGCG
CCTGATGGCTATTGCCATGGTGATGATACTCTTTAAATGTGAAGTCAACC
AAGACAAGATATATTGCACTTATTTAGAGTGTATTCAACGTGGAGTAATG
GGAGATTAATGTTAGGATTTTGTCCTTCTGTCCATAGTGATCACGAGCTA
TATAATTTTAGATTGAAtggaaataataaatatatttattgttttcaaca
AACACTTGACTTGAAAATTAGAGAGCTAAACAATCGAGGAAGAATTTAGA
AGCTcttaatcaaaaatatattatcaTAGTCAATTGTATATTTAATAGTA
cgaatataaattttttaaacttatttGACCTTATCAATGGCAAACCTGCT
ATTAAGCATTTTTGAGATGATGAGATCATTTGAAGTGACTTCGGTAACTT
CTCGGTGTTTTTGAAATTCCTTGCTGTTTTAGCATGGTAAGATTTGAACA
AGTACTAAGGGATTTTATTGATTAAAGCTACCTTTCGTTTTTATATTTTC
CTTTTATTCTGacacccttgtgtcacagacctgttGGAACCCCAATCCCA
CTGGAaactttggcaaaaatttcgtccccggtaggaaaatacccGGGAAT
TTTCATCCgaaaaatcaatgtttaaaaGCCCTTCTCCAAAATCATCCGCA
CTGGATCTTTTAAcctttaaacaataaaatttatatcCCCATTTGAATct
cgatagaaatttttatccccactaggGAAAAATGTTCcgccggggctgtg
agacaggggtgtattttgagttattattttttatttaatcatGAAATATA
ATGTAGAAAATAGcttcaaataaatattttacagataTCTTGTAAacaga
attttgaaatattttgacagtaaaatatttgaaaactttcaTACAATTTT
TAGTGTTTGCGTGACTATACTAAGAGTGTAGAGACCCCATATATAGACCC
ACATGTTAGTTTTAAAAGGTTTGTAACTGGACATGCATAGTTCGAAAGTA
ATCTTTTTCAAAGGCGCTCAGCTACCCAGATTTTTTTGATAAGACTTCCA
AAATGAGACTTTTGCACAAGAAGAATGGAATCAAGTAAAGgaagaattat
ttcttttctattctTCAAACAAAGTCTTTTTCGTTGGTGATGAGGCAGGT
GGAAAAAAATAAGTCAAACTGTTTTTATTTcacatgctgaatattttttc
ttaattttgaaaaatttgaaaatgttataaGATTTATTTTAGACCAGTTG
GTTTGTAAAATAGTAGCAAATTTACTAGATGAAATATCTTGAAGTTATTG
TAGACTCAATTGGGCCGTAAACTATGTATCTTTAAACGCCTCAGGGTTCA
TGGACCTAATTTATAAGGAAATTCGCGAATATTCTTCCATAAACTGTTCT
T
Run BLAST on NCBI

protein sequence of TCONS_00058151-protein

>TCONS_00058151-protein ID=TCONS_00058151-protein|Name=TCONS_00058151-protein|organism=Clytia hemisphaerica|type=polypeptide|length=193bp
MCSCFRFMQYVVSVLVLLSAGAFILCGVVNYWWVTDNVIITTETGLWKSC
TKTLLTGRTCYQRGNLFEFAEVFGSQTPMHKDIIIIALIVAVVTGLIHLI
CMSVTMCQRYPAKSTILIGTIFLFFGVASSVFGTIWALVQISHENQGWAF
YALYGGDGAIILAFIFSIVLLCSRAPGAYRATNRDDEIAMIPH
Run BLAST on NCBI

transcript from alignment at scaffold_307:43343..52560-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058151 ID=TCONS_00058151|Name=TCONS_00058151|organism=Clytia hemisphaerica|type=transcript|length=9218bp|location=Sequence derived from alignment at scaffold_307:43343..52560- (Clytia hemisphaerica)
AGTACCATAATTTCAAAAATTTTCCGGCCCGTCGGCCCCAACCATGGTGG GGCCTCCTTAGTCACTATATCATTTAGCCCTTTCACTTTTAAAACCGATT CGCCGGCCCTGGCAATATATTGTCCTCTATCTGGCTATGCTACCCTCTTT ACTGGTTCTTTTAAAAAGTAAGTATGTATTTTGTATTTGGTTTCGTTTTA AACATATTTTTATTATGAGTTGATAAGACGGGATGGAGTTTTTTTTTACA AGCTCTTATTTGATTTGGTTGGTCGTTAACCAGTAATAAAACAATTTTGT TACTTTCTCTAAAGAACGCGTCATTTTTTAATACTTCAAATGACCAATTA CTAGTATCTTCTTAATCGTTAGAGTCTTATAAAAACTCCATCTCATCTGA AGTTGGTGCACTGCACGAACAAGCTGCTCCAGGATGACGTCATTGTTTTT GCACTTTCATTTAAATCTCGCAACTCAAAGCACAGCAATTAATAAGTTGT AACATTTTTGCATTGTTTTACATACAGTTTGTAATTTGCTTTTTTTGTTA GTTGAAAGTGTGTCACGCTGATTTGAGTATGTTGGACTGCGAGCAAGCTT TTAATTGTTTCTTATCAGTCAATACAATTCGCTCAGCATCATCTCTCTTT CTCTCTTTCTCCTTATCTGTCGCTTCTTTGAACACTGATCATAACATAAT CTGATAAAGTTTTGAATTTGAATCTTGTTTGTTGGATCTAGACGGATTGA AATTTTTTAGAAATTTGTTCGTTGTCGTTATGAAGGAGTGGTTGATTGTG AGTTCTGTTTCAAAGTGTATATGCAAGAAATATTTAACAGATAAAATAGG TTTGGACAGTTGACTGGTAACCCCTCCTCGCAAACCCGGTGAGATTTTTT AGCCAGTGGGGATAAAAATAACGAACCAAAACGAAATGGGGATTGACAGT GTGGCTCGAATCCTTCAGATCCTTGGTTAGAAAAAGCTATACCTGTTTAC TTTTTTCTTCCCAGACTCAACAAGCCATCAACCAACAAAATTACCACTGA CATCTGAAAATTCACACGACCTCTCCACTTGACACTTCTAAATTATCTGC CATTATGAAGATGTTTCGAAATTAACCAATCGGGTTTACAATCGGAATTC CTCTGGGAGTTAGCGAGTCGGAAAATGTAAAGTTATGTAATAGGTAATAC ATAATTTTTCCGGGGGTTAAACTTATAAATAAAATTGAAATGGTTCGTTT TTTTCTTCATTATATATTTAAGTCTTCATTATCAAAATTCTAGAAATGCT AGTTTGTAGACCATATTAGAAAATGGTTATATATTTCGCAAAATAAACAC TTACAAAAGCTATTACTTACTATTTTTACCCCCGCTTTTTTAACAGCGTC TTCTGTGGGCGTGATATCAGGCAGAGATAAAACGCCCTCATCGTAAGATT CTCGGGTCGTCTTATTGTTTGTTCCTTTTGTCGAGTGTGTCGGTCCTATT GTTCATTNTAGAATAGCAATCCCAGTAATGAGCCAGAAAATTATAGTCGA GATAAATTGGAATTTTTGGGTCATTTTTTCTCGTTTTTCAGAGTTTCACC CTGTGTCATAATAGATCCACTGGAACCCCAGGCTCACTAGAAAATTTGCC AAAAATTTCGTCCTAGGCGGAAAATACCCTACAATTNAAACAAAAAGATT ATCATATTATTTTTGCATGAATTACGCTACCTTATACGTCATTATAAAAT TATACAAAACGAAAGCGAGTCTAGGCCGCACGCCTAGAGCGCGGGCCCTA ATATTTTTTCTCTTGCGGTCTTCAGAGGAAAACGAAAGTGACNCAACCCC ACTGGGAAATCGACTTGAACTTCAGCCCCACTTAAAATTCAATGGAAAAA ATTGCACTTCAAAATCATCCCCACTGGAATTGTTGGGCTGGGAGCAATGC AATTTCTATCCTTATTGGGATTTCAGTAGAAAATTTCTTCCAAACTTAGG GAAAAACTTCCAGCAGGACTGTGAGATAGAGGTTTAGAATTTATAGTTAG AGCGAGAATAGATCAGAAGTCGTGTTGTTGATACTCTACATTCCCGAAGT CATTAAAATTAATAAGATTATTTGTGGTTCTATTAAACTTTTGCTGGATT CTCCTTTTTCTCAACGACACGTTTTTTTCACGAGACCAAACTGTATAAGA ATATAAGGCTTCGATGGCCAAAATGTTAAGAACAAGTTTCAAGATTCGCG GGCTCTAAAAAACCCGATTTCTTAGGCAAATGAACAAAAATACTCAAAAA AATGGCAAAAATAAGAATCCGAAGGCTTCAAAACTTGTTGATGTTTTATA AGAAACTTTTTTCTTTTTTTTTTTGTAGCATAGTATTTGCAATGATAAAA ATATCTAAAAATATTACAACGTAATTTTGCTAATATTGATGATAAAGTAA AAATCTTTCTTAAACTAAAAAACATTCAGAGGAAAAAGAAGTAGACATTA CTGTCTTTTCACCTAACCCATTTGNACGTTTTTTCAACGTTCATCTAACG TAAAATGGACATTGTGAACGTTAGACAAACGTTAAAACAACGTTGTGTGC CAGCTAGAATAGCAATCCCAGTAATGAGCCAGAAAATTATAGTCGAGATA AATTGGAATTTTTGGGTCATTTTTTCTCGTTTTTCAGAGTTTCACCCTGT GTCATAATAGATCCACTGGAACCCCAGGCTCACTAGAAAATTTGCCAAAA ATTTCGTCCTAGGCGGAAAATACCCTACAATTTCAACCCCACTGGGAAAT CGACTTGAACTTCAGCCCCACTTAAAATTCAATGGAAAAAATTGCACTTC AAAATCATCCCCACTGGAATTGTTGGGCTGGGAGCAATGCAATTTCTATC CTTATTGGGATTTCAGTAGAAAATTTCTTCCAAACTTAGGGAAAAACTTC CAGCGGGACTGTGAGATAGAGGTTTAGAATTTATAGTTAGAGCGAGAATA GATCAGAAGTCGTGTTGTTGATACTCTACATTCCCGAAGTCATTAAAATT AATAAGATTATTTGTGGTTCTATTAAACTTTTGCTGGATTCTCCTTTTTC TCAACGACACGTTTTTTTCACGAGACCAAACTGTATAAGAATATAAGGCT TCGATGGCCAAAATGTTAAGAACAAGTTTCAAGATTCGCGGGCTCTAAAA AACCCGATTTCTTAGGCAAATGAACAAAAATACTCAAAAAAATGGCAAAA ATAAGAATCCGAAGGCTTCAAAACTTGTTGATGTTTTATAAGAAACTTTT TTCTTTTTTTTTTTGTAGCATAGTATTTGCAATGATAAAAATATCTAAAA ATATTACAACGTAATTTTGCTAATATTGATGATAAAGTAAAAATCTTTCT TAAACTAAAAAACATTCAGAGGAAAAAGAAGTAGACATTACTGTCTTTTC ACCTAACCCATTTGTTCGTCCTTTTCAAATGTTTGTTGAGCTTCTGTTCA AGAATTGTACTAAGGGAGAAGAAATCTTTTTGGTTTTTGATATTTCCGAG AGGTGATATATCAAGCAGCAGGTGGAAAAAGATAAAGAAAATATGGATAT TAAATTATTTAAACGTAATTTGATCTGTGAGGGTTATTATAGTTTTCTTA TTATAAGAAGTTTGTAAACCTAAAAATATCAAATTTAAGGCGAGAAAAAT TACGAATTTTTCTTAGAAATGGGATCGTTGTGTAACGATTTGCAATGTCT GATAAAAATCCGTTCCATTACTTTTTTTCCCCCGATAAACACCAATGACT ACCCGATGATTAAACAATATCTTAAAAAAGTGACCCAGCATTTTCAAACG AACGAAATTTCAAGTTTTCTTATCAATAAAAAGTCTTATAATAATTCATA ATTTATCAATTGTTAAATGTGTTACCTTTTAGCTTTGAGGGGAGATTTTC ATATTTTTGACTTTCTTTTATCATGTTCCCACTAAGCTCCAAACAACATT TGAGGTCGTACTAGTTTTGAAAATCCAGGTGACTTGTTTAAAGTTTGTTT TCCTCCCTCCAATGGAATATTTATCTAAGTTTCTTAGTTTTTAAAGGTTA TTTGAGAGTCTTTGTTCCATCTTGCTTAAATTTAGTCGTTTATATTTACG TTCTTTTTGCTTGTTTATGTTGACATTAGCTTCTTTCTACAGTTGACCGA CATGATTTTTTATAAAATCATTATATTATGTGTCTTGCTCGTAAGAGAGA AATAGTGGATGTTGAGTAGGTTTTCAATTTCATGATTTAAGGATGAAATG TATTTTTGAGGCTTAGACGTTAGGCTTAGAAAACGATGACATTTTGTATT AAGGGNAAGCTCAGAGAAAACCACTTGATGATTCTTGTCTTAACCCTGTT ATACTTTAACTTAACAGGGCTAAACTATCTCCCTTACCTTATTTTGACAT AAAAAACTGCCATACAAACAAATAATACTCTTTGTACCGCATCTGGATGA ATTCTTTTTCGCGTCAAAAATTTTCTTAGTAGGGGTTAGGGGGGGGGCGA AAAAATATTGGGCCTTATGAGGGGGGGTTCGAAAATTTTTTCNGGGGGGG GGGGTCCAATTTTTTTTGGGAAACTCAAGAGAAAATGTAGGAAGTCTAAT TTCATAGTTTTACGTTTGAAGATTTCAAAAATTTTTCTGCCTTACGGCCG ACAACTCATAATTTATCTTATTGGATATATGTACATTTCATATTGGCATT ATTTGGGCATCATCGGATCATCGCCTTGCCCTTTTGGTTTGTAAAATTGA GNGACCGCTCCCTAACACTAAAAAATTTCAGTTATTTAACTTTAGTATCA ATGTTTGAGAATTCGAGAACTCGTCAAATGTTTCAGTTAGTTTGAATAAT GATAAACTATCCCACCCCAGTCCCTGGTGGAATTTTTCCCAAAAACTGGG GATAAAGATTTCTATCGAAATTCCATTGGGTAAATTAGCCAAATTCTATT CTTGTAAGCAAAAAGGAAATCCAGTTAGGATGATTTTGCAGTGCAATTAT TTACATTGAATTTCGAATTGGGATGAAATGAAAGCCAATTTCACAGTGGG GCTAAAACTTCAGAGTAACTTTTGCAATAGGACGAGATTTTGGCTGAATT TTCCAGAGGGGTGGTGTCCCGACGGGTTTTGGTCACTGGGTTTGTTTTAT CAGCACGCAATATTACATGACGTTACGAACGTTATTGTTAAACGTTAAAC AATGATTTTCGCTAGTTTGGAATCTCATACAGAGTCGACTTTCAACCTTT ATCTTAAAATGCAATTACCTACCGTATGTATTTTCAGAGTAAAAAAATAA AGGATTTTGACAGCGACCAATCATAATGTGTTCTTGTTTTCGCTTCATGC AATATGTTGTCAGTGTGTTGGTCTTATTAAGTGCAGGAGCCTTCATTCTA TGTGGAGTGGTTAATTACTGGTGGGTTACTGACAATGTCATCATCACAAC AGAAACAGGTGAGCTTAATCTTCCTTCGTATAGGCCATTCAGGGCCGAAG TGAATTATGGGTAATCCTTGGTTAGACGTAAAAACATCCAAAACTTTAAA ACAACAAAGGTTGCTGTCCTGATTACCCGTGATTTCATTCACACTTTATG CACCCCTAGATTACTTGGTTTGCAAGCTGATAGCCGGTATGTCCGAGTCA AAGTTCGAAAATCGACGCGAGAGAATTTTAAAAATTTTCTGACCTTTGAA ATTTTATGTTTTTAGAAAGATTAGTCGAGGTAGAGATTGATTATTCAAAG TAATACAGGATCAAAAGCTTTAGGCTTTGTTTTGGAAATGGGAAATTTGA CATCTGTTATCACTTTGCTGCTCCTTTTAATCATTTTGGTTTGCTCCTTT TTAGGTTTATGGAAATCATGCACAAAGACTCTTCTGACCGGCAGAACCTG TTATCAAAGAGGAAATTTATTTGAATTTGCCGAAGTCTTTGGCAGCCAAA CACCGATGCGTAAGTTTTTGTGAATATCGATAAAATAAACACGCCCCTAT CTCAGTGACTATCATAAAATTATCAACCGTTGGGAGGTGAAATTTATTTA ATTAAATGTGGATGTGATACGGGAAGGGATTTTTAATATCATGATACACC CCCTTCTCACAAAACCGGTGGGATTTTATCAGCCAGTTGGAGCAAAGATA ACAAACCAAAACTTGATGAGGATTCATATTCCTATGTTTTTTATGGCACA ATATTTTGCAGTGAGGATTGGCTTATCTAATTATTTTCAACGGGAAAAAA AATTAGAGTATACAATCTTCCACTGGGGACGATATTTCGACCAATTTTCC AGTGGGAAGGGCTCCCAATGAGTCTGTGAGAAGGGGGTTACATGGTGGCT GATCTTCCTCCCGGTGAAGAGGGGATTCTATTTAATCTGTACTTTTTGTA AATATTGTACAGAGGAACTGGTTCTGCCCTTACTTTTATTATACTGCTGG CAAAAGAGTACCAGAAAACACCTATGCGCCTCATCTCATAACGTGAAGTG AAACACTCATAAGTTCCCCGCAGAAAAATTGTATCTTTCATCTCTGAAAC ATCCTTGGTATTTTCCTAAAGCCAACTATGGCGTCTTAGAATAGTTTCTT TATCGATATTTCTAAACCAATTAAAATACATTGCCTTGGCGACCAAGCCC GTTGCTGAAGCAATTTTTTTCTATCCAATTTTTCGGATTCAGCAAATGGG TTTTCGTCGCCAGGTTTTAGGCTACTACCAATACAGTTGAACTACAGTTA TTGTAAAGATTGTAAATATTTCATTTCAGATAAAGACATAATCATCATTG CGTTGATCGTTGCAGTGGTTACCGGTCTCATTCATTTGATTTGTATGTCA GTCACCATGTGTCAACGGTATCCTGCCAAATCCACCATCCTCATTGGTAC CATTTTTCTGTTCTTCGGAGGTAAGTTTCTTTTTTTTAGGTTTATCGCTT GAACTTTATTAATTGTGTTTACTTGTAAAGCGTTTATCTTGGAATTTTTA TCAATTAATTCCCAGGGAATTTTATTTCTGTTCTTATATTTCACTATAAA TACAAAACTGACGAGGACTTTTAATGGTAGCAGTGGGATAAATGGATCAG GGAAAAAATGCAATTATAGGCCTTTCTATGATCGCTTTAAGTGCCTCATT TTGAAACCATTATCAAGGTGATTAGATCCCTCGAGTCTTCCAATGTCTCC TTCTGTGAATTATTAATTACCTTTTTAGAAATATTTTGAAAACGAGGCAA GCGTTATACTCTTGACGTAATTTATGAAAAGGTCTATTGGAATAGAACAA CTTTAGCTTTCCATGAGTTTTGGCTGTATATGCTCTAAAATAATGCCGAA AAATTTGGTATTTCCGCTTAGCGGGACAAGTCGAGTGTGGTGTTTTAAGG GAGTAAAATATTTTGTATTTCTAACATCAGCCATGGTTTTCGGCCGATTT TGTCGGTCGATTTTTCCGTGCAGGGCTTGTGAGAAAGGATTGTCGTTTAA GGTCCTGTAACAGACTTTCAAACTAATTTATTCATTTTTTCTTTCTCGCA GTTGCTTCATCTGTCTTCGGCACAATTTGGGCGTTAGTTCAAATTTCACA TGAAAACCAAGGGTGGGCTTTTTACGCCCTTTACGGTGGTGATGGTGCTA TTATACTAGCTTTCATTTTCTCAATTGTCCTGTTGTGTTCGCGTGCACCA GGTGCTTACCGCGCGACCAATAGAGATGATGAAATTGCAATGATTCCGCA TTAAATCAAAATTGGCGCCTGATGGCTATTGCCATGGTGATGATACTCTT TAAATGTGAAGTCAACCAAGACAAGATATATTGCACTTATTTAGAGTGTA TTCAACGTGGAGTAATGGGAGATTAATGTTAGGATTTTGTCCTTCTGTCC ATAGTGATCACGAGCTATATAATTTTAGATTGAATGGAAATAATAAATAT ATTTATTGTTTTCAACAAACACTTGACTTGAAAATTAGAGAGCTAAACAA TCGAGGAAGAATTTAGAAGCTCTTAATCAAAAATATATTATCATAGTCAA TTGTATATTTAATAGTACGAATATAAATTTTTTAAACTTATTTGACCTTA TCAATGGCAAACCTGCTATTAAGCATTTTTGAGATGATGAGATCATTTGA AGTGACTTCGGTAACTTCTCGGTGTTTTTGAAATTCCTTGCTGTTTTAGC ATGGTAAGATTTGAACAAGTACTAAGGGATTTTATTGATTAAAGCTACCT TTCGTTTTTATATTTTCCTTTTATTCTGACACCCTTGTGTCACAGACCTG TTGGAACCCCAATCCCACTGGAAACTTTGGCAAAAATTTCGTCCCCGGTA GGAAAATACCCGGGAATTTTCATCCGAAAAATCAATGTTTAAAAGCCCTT CTCCAAAATCATCCGCACTGGATCTTTTAACCTTTAAACAATAAAATTTA TATCCCCATTTGAATCTCGATAGAAATTTTTATCCCCACTAGGGAAAAAT GTTCCGCCGGGGCTGTGAGACAGGGGTGTATTTTGAGTTATTATTTTTTA TTTAATCATGAAATATAATGTAGAAAATAGCTTCAAATAAATATTTTACA GATATCTTGTAAACAGAATTTTGAAATATTTTGACAGTAAAATATTTGAA AACTTTCATACAATTTTTAGTGTTTGCGTGACTATACTAAGAGTGTAGAG ACCCCATATATAGACCCACATGTTAGTTTTAAAAGGTTTGTAACTGGACA TGCATAGTTCGAAAGTAATCTTTTTCAAAGGCGCTCAGCTACCCAGATTT TTTTGATAAGACTTCCAAAATGAGACTTTTGCACAAGAAGAATGGAATCA AGTAAAGGAAGAATTATTTCTTTTCTATTCTTCAAACAAAGTCTTTTTCG TTGGTGATGAGGCAGGTGGAAAAAAATAAGTCAAACTGTTTTTATTTCAC ATGCTGAATATTTTTTCTTAATTTTGAAAAATTTGAAAATGTTATAAGAT TTATTTTAGACCAGTTGGTTTGTAAAATAGTAGCAAATTTACTAGATGAA ATATCTTGAAGTTATTGTAGACTCAATTGGGCCGTAAACTATGTATCTTT AAACGCCTCAGGGTTCATGGACCTAATTTATAAGGAAATTCGCGAATATT CTTCCATAAACTGTTCTT

Coding sequence (CDS) from alignment at scaffold_307:43343..52560-

>TCONS_00058151 ID=TCONS_00058151|Name=TCONS_00058151|organism=Clytia hemisphaerica|type=CDS|length=2328bp|location=Sequence derived from alignment at scaffold_307:43343..52560- (Clytia hemisphaerica)
TTGCTTCATCTGTCTTCGGCACAATTTGGGCGTTAGTTCAAATTTCACAT
GAAAACCAAGGGTGGGCTTTTTACGCCCTTTACGGTGGTGATGGTGCTAT
TATACTAGCTTTCATTTTCTCAATTGTCCTGTTGTGTTCGCGTGCACCAG
GTGCTTACCGCGCGACCAATAGAGATGATGAAATTGCAATGATTCCGCAT
TAAATAAAGACATAATCATCATTGCGTTGATCGTTGCAGTGGTTACCGGT
CTCATTCATTTGATTTGTATGTCAGTCACCATGTGTCAACGGTATCCTGC
CAAATCCACCATCCTCATTGGTACCATTTTTCTGTTCTTCGGAGGTTTAT
GGAAATCATGCACAAAGACTCTTCTGACCGGCAGAACCTGTTATCAAAGA
GGAAATTTATTTGAATTTGCCGAAGTCTTTGGCAGCCAAACACCGATGCA
TGTGTTCTTGTTTTCGCTTCATGCAATATGTTGTCAGTGTGTTGGTCTTA
TTAAGTGCAGGAGCCTTCATTCTATGTGGAGTGGTTAATTACTGGTGGGT
TACTGACAATGTCATCATCACAACAGAAACAGTTGCTTCATCTGTCTTCG
GCACAATTTGGGCGTTAGTTCAAATTTCACATGAAAACCAAGGGTGGGCT
TTTTACGCCCTTTACGGTGGTGATGGTGCTATTATACTAGCTTTCATTTT
CTCAATTGTCCTGTTGTGTTCGCGTGCACCAGGTGCTTACCGCGCGACCA
ATAGAGATGATGAAATTGCAATGATTCCGCATTAAATAAAGACATAATCA
TCATTGCGTTGATCGTTGCAGTGGTTACCGGTCTCATTCATTTGATTTGT
ATGTCAGTCACCATGTGTCAACGGTATCCTGCCAAATCCACCATCCTCAT
TGGTACCATTTTTCTGTTCTTCGGAGGTTTATGGAAATCATGCACAAAGA
CTCTTCTGACCGGCAGAACCTGTTATCAAAGAGGAAATTTATTTGAATTT
GCCGAAGTCTTTGGCAGCCAAACACCGATGCATGTGTTCTTGTTTTCGCT
TCATGCAATATGTTGTCAGTGTGTTGGTCTTATTAAGTGCAGGAGCCTTC
ATTCTATGTGGAGTGGTTAATTACTGGTGGGTTACTGACAATGTCATCAT
CACAACAGAAACAGTTGCTTCATCTGTCTTCGGCACAATTTGGGCGTTAG
TTCAAATTTCACATGAAAACCAAGGGTGGGCTTTTTACGCCCTTTACGGT
GGTGATGGTGCTATTATACTAGCTTTCATTTTCTCAATTGTCCTGTTGTG
TTCGCGTGCACCAGGTGCTTACCGCGCGACCAATAGAGATGATGAAATTG
CAATGATTCCGCATTAAATAAAGACATAATCATCATTGCGTTGATCGTTG
CAGTGGTTACCGGTCTCATTCATTTGATTTGTATGTCAGTCACCATGTGT
CAACGGTATCCTGCCAAATCCACCATCCTCATTGGTACCATTTTTCTGTT
CTTCGGAGGTTTATGGAAATCATGCACAAAGACTCTTCTGACCGGCAGAA
CCTGTTATCAAAGAGGAAATTTATTTGAATTTGCCGAAGTCTTTGGCAGC
CAAACACCGATGCATGTGTTCTTGTTTTCGCTTCATGCAATATGTTGTCA
GTGTGTTGGTCTTATTAAGTGCAGGAGCCTTCATTCTATGTGGAGTGGTT
AATTACTGGTGGGTTACTGACAATGTCATCATCACAACAGAAACAGTTGC
TTCATCTGTCTTCGGCACAATTTGGGCGTTAGTTCAAATTTCACATGAAA
ACCAAGGGTGGGCTTTTTACGCCCTTTACGGTGGTGATGGTGCTATTATA
CTAGCTTTCATTTTCTCAATTGTCCTGTTGTGTTCGCGTGCACCAGGTGC
TTACCGCGCGACCAATAGAGATGATGAAATTGCAATGATTCCGCATTAAA
TAAAGACATAATCATCATTGCGTTGATCGTTGCAGTGGTTACCGGTCTCA
TTCATTTGATTTGTATGTCAGTCACCATGTGTCAACGGTATCCTGCCAAA
TCCACCATCCTCATTGGTACCATTTTTCTGTTCTTCGGAGGTTTATGGAA
ATCATGCACAAAGACTCTTCTGACCGGCAGAACCTGTTATCAAAGAGGAA
ATTTATTTGAATTTGCCGAAGTCTTTGGCAGCCAAACACCGATGCATGTG
TTCTTGTTTTCGCTTCATGCAATATGTTGTCAGTGTGTTGGTCTTATTAA
GTGCAGGAGCCTTCATTCTATGTGGAGTGGTTAATTACTGGTGGGTTACT
GACAATGTCATCATCACAACAGAAACAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036642XLOC_036642Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058151-exon-scaffold_307-1575043694:52394..52560TCONS_00058151-exon-scaffold_307-1575043694:52394..52560Clytia hemisphaericaexon
TCONS_00058151-exon-scaffold_307-1575043694:47053..47223TCONS_00058151-exon-scaffold_307-1575043694:47053..47223Clytia hemisphaericaexon
TCONS_00058151-exon-scaffold_307-1575043694:46552..46656TCONS_00058151-exon-scaffold_307-1575043694:46552..46656Clytia hemisphaericaexon
TCONS_00058151-exon-scaffold_307-1575043694:45591..45731TCONS_00058151-exon-scaffold_307-1575043694:45591..45731Clytia hemisphaericaexon
TCONS_00058151-exon-scaffold_307-1575043694:43343..44959TCONS_00058151-exon-scaffold_307-1575043694:43343..44959Clytia hemisphaericaexon
TCONS_00058151-exon-scaffold_307-1510915933:52394..52560TCONS_00058151-exon-scaffold_307-1510915933:52394..52560Clytia hemisphaericaexon
TCONS_00058151-exon-scaffold_307-1510915933:47053..47223TCONS_00058151-exon-scaffold_307-1510915933:47053..47223Clytia hemisphaericaexon
TCONS_00058151-exon-scaffold_307-1510915933:46552..46656TCONS_00058151-exon-scaffold_307-1510915933:46552..46656Clytia hemisphaericaexon
TCONS_00058151-exon-scaffold_307-1510915933:45591..45731TCONS_00058151-exon-scaffold_307-1510915933:45591..45731Clytia hemisphaericaexon
TCONS_00058151-exon-scaffold_307-1510915933:43343..44959TCONS_00058151-exon-scaffold_307-1510915933:43343..44959Clytia hemisphaericaexon
TCONS_00058151-exon-scaffold_307-1491911889:52394..52560TCONS_00058151-exon-scaffold_307-1491911889:52394..52560Clytia hemisphaericaexon
TCONS_00058151-exon-scaffold_307-1491911889:47053..47223TCONS_00058151-exon-scaffold_307-1491911889:47053..47223Clytia hemisphaericaexon
TCONS_00058151-exon-scaffold_307-1491911889:46552..46656TCONS_00058151-exon-scaffold_307-1491911889:46552..46656Clytia hemisphaericaexon
TCONS_00058151-exon-scaffold_307-1491911889:45591..45731TCONS_00058151-exon-scaffold_307-1491911889:45591..45731Clytia hemisphaericaexon
TCONS_00058151-exon-scaffold_307-1491911889:43343..44959TCONS_00058151-exon-scaffold_307-1491911889:43343..44959Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058151-proteinTCONS_00058151-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_307supercontigscaffold_307:43343..52560 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.70462 8.65801 13.3527 20.7551 3.05314 2.31468 9.66058 13.6905 0.261452 0 1.28217 1.73017 0.248027 1.84406 0.830667 1.54614 0.569859 2.28965 0.305607 1.41697 6.50827 4.41084 5.25798 5.63815 1.29855 7.32278 0.839188 0.663478 2.13826 2.79478
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00058151 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top