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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00058156 ID=TCONS_00058156|Name=TCONS_00058156|organism=Clytia hemisphaerica|type=transcript|length=1232bp
GATTTCTTTATCGTTTTGGTTGTTCTTTCTGGTTGGTATCTAAAATAATG
GAATTAATACCGTAtttatttgtttgcttgtttgttAACTCAATCTATTT
TCTTTTCCATCTTTGTACAATCGACAGACGTGCTTCTCCGGGTTTCTACA
AATGCTTCAGAGCGATCTTTATCCCTTatttgatgGTAAGTGACATTGTA
TTTGTGGTGATCTTTCTCTTCGTCCCATCTTTACCACAAGCGTACTACCT
TGTCTCATTTTCGTGGTTTGCACTGTTACTTATAAATTGGAGTTTCATAA
ATTGTTGGAATCGTTGGGAAGGAATAAGAATCATAAAAGAATGGGGCACA
GATGACAACGGTAATCCAAAATGTACCAAGCGGTATAGACACTCGATGAA
AGAAATCAAGGAAATTCTGGATGAAAATTTACCAAAGGAGCCGAAAGTGA
TTGTTCAATGCGAAGCTGTGGAACCTCGAACTTCGTGCTGCAGAAAACAA
CGCGTTAGTTGGAGCAATCAGAAAGAGTTTGAATTTCAACATTGGATCGA
TGTGACTGAACAACATTTGGTGAAATCACAAATTGAAGAAGCGATTTTTG
gtgaattgaaaattgatttcgaATTTGATGACGAAGAAACGAAGGAATCA
TATGAACAACACGTTCAGAATCTTGTAAAAGAAGCAAAGCAACATTCTCC
ACACGCTCAAGTCAACGTCAAGCAACTTTTCCAAGTCGGTGAAAAAGATA
TCAAAACCTACAGACGGTCGTTTTATGGCAAGAAGGCTCTTTTTGGAAGA
CCATGGGTGTGTCTTCAATGCGTTTTTCCTCAGATCGAACTTTcgttcaa
aatattgaaatggtttctcgaaaaaattggcttcaaaagtttattgacca
aagaaattgtaatcaGAAAAGTAATATCTGACAGAAATATTGTATCTGTA
TAGCATTTGTGATCAATAATTTTATACCATTTTGAATAGTATAACATGGC
GAAGACCTGTTCCACGGGACGTTACGGTCTTTGTGTCTTAAACATTAAGC
TATTCAACTTACAGTAAACCAATCAATCTGCTATACAGACCTGTTaggaa
aaatttatttacacTATAGCTCTTAAAACATCCATCCACGAAagttagaa
tttagaaaatatacAAACTCTTTCAAAATCAGCCTCTTGAAAACACTTTT
CATAAAAGCCAGTAAGTTCGGTTGAAGCTGCG Run BLAST on NCBI transcript from alignment at scaffold_307:84736..86683- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00058156 ID=TCONS_00058156|Name=TCONS_00058156|organism=Clytia hemisphaerica|type=transcript|length=1948bp|location=Sequence derived from alignment at scaffold_307:84736..86683- (Clytia hemisphaerica)
GATTTCTTTATCGTTTTGGTTGTTCTTTCTGGTTGGTATCTAAAATAATG
GAATTAATACCGTATTTATTTGTTTGCTTGTTTGTTAACTCAATCTATTT
TCTTTTCCATCTTTGTACAATCGACAGACGTGCTTCTCCGGGTTTCTACA
AATGCTTCAGAGCGATCTTTATCCCTTGTAAGTTTTAAGAATCCTTTTAA
GAAAGAAATACTTTACACATGAACTTTAGCATATCCTTCTCAAATCGAAT
CGCTCTTAATATAGTAGCCAAAAGTTAAGTTAATTTTAGTTAAAATACAC
GTGTTCAGATGCTCTTAACTTTTAGAGTTTTAAGCCTAAAAATGTTCTTA
ACATGTTCTTATATTTCAGCCATTGAAATCTCATCTTATGATATATTTTG
CTCTTATAAACGTGCATCACTTTTAGAACAAAGCTTCAAGGTACATTGAA
TCGGAAGTTTTGAGGTAAAGACATTATCCGGATATAGTTACATTATCAGT
ATGTACTATCTGTTCAATAATAGTGAACATAAATAGTCAATTCCAGAAGA
AATCAGCACTTTTTGATACATTTTTCTTTTTCAAAGCAACGGCAATACAC
CCTTGTCTCCCGGCCCAGGTGGAACTTCTTCCCACAATGGGGATGAAAAT
TGTCTAACGAAATCCGCATGGGAATAGTAATTCTATTGTTCTCATGTCAA
AAAATCGAATGGGGATGGGTTTGGAGTGGAATTTTTCTACATTGAATATC
TGATGGAAATTAAAATAACAAGTCAAGTTACCATATATTAGGGCTGAAAT
TGTTGGGTATTTTCCCACCAGGAGAAAGTTTAGCCAAACATTCCATCTGG
TCTATTACGCGGAGGTCTAACAATATTCATTTCAAATTTTCAGATTTGAT
GGTAAGTGACATTGTATTTGTGGTGATCTTTCTCTTCGTCCCATCTTTAC
CACAAGCGTACTACCTTGTCTCATTTTCGTGGTTTGCACTGTTACTTATA
AATTGGAGTTTCATAAATTGTTGGAATCGTTGGGAAGGAATAAGAATCAT
AAAAGAATGGGGCACAGATGACAACGGTAATCCAAAATGTACCAAGCGGT
ATAGACACTCGATGAAAGAAATCAAGGAAATTCTGGATGAAAATTTACCA
AAGGAGCCGAAAGTGATTGTTCAATGCGAAGCTGTGGAACCTCGAACTTC
GTGCTGCAGAAAACAACGCGTTAGTTGGAGCAATCAGAAAGAGTTTGAAT
TTCAACATTGGATCGATGTGACTGAACAACATTTGGTGAAATCACAAATT
GAAGAAGCGATTTTTGGTGAATTGAAAATTGATTTCGAATTTGATGACGA
AGAAACGAAGGAATCATATGAACAACACGTTCAGAATCTTGTAAAAGAAG
CAAAGCAACATTCTCCACACGCTCAAGTCAACGTCAAGCAACTTTTCCAA
GTCGGTGAAAAAGATATCAAAACCTACAGACGGTCGTTTTATGGCAAGAA
GGCTCTTTTTGGAAGACCATGGGTGTGTCTTCAATGCGTTTTTCCTCAGA
TCGAACTTTCGTTCAAAATATTGAAATGGTTTCTCGAAAAAATTGGCTTC
AAAAGTTTATTGACCAAAGAAATTGTAATCAGAAAAGTAATATCTGACAG
AAATATTGTATCTGTATAGCATTTGTGATCAATAATTTTATACCATTTTG
AATAGTATAACATGGCGAAGACCTGTTCCACGGGACGTTACGGTCTTTGT
GTCTTAAACATTAAGCTATTCAACTTACAGTAAACCAATCAATCTGCTAT
ACAGACCTGTTAGGAAAAATTTATTTACACTATAGCTCTTAAAACATCCA
TCCACGAAAGTTAGAATTTAGAAAATATACAAACTCTTTCAAAATCAGCC
TCTTGAAAACACTTTTCATAAAAGCCAGTAAGTTCGGTTGAAGCTGCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00058156-exon-scaffold_307-1575043694:86507..86683 | TCONS_00058156-exon-scaffold_307-1575043694:86507..86683 | Clytia hemisphaerica | exon |
| TCONS_00058156-exon-scaffold_307-1575043694:84736..85790 | TCONS_00058156-exon-scaffold_307-1575043694:84736..85790 | Clytia hemisphaerica | exon |
| TCONS_00058156-exon-scaffold_307-1510915933:86507..86683 | TCONS_00058156-exon-scaffold_307-1510915933:86507..86683 | Clytia hemisphaerica | exon |
| TCONS_00058156-exon-scaffold_307-1510915933:84736..85790 | TCONS_00058156-exon-scaffold_307-1510915933:84736..85790 | Clytia hemisphaerica | exon |
| TCONS_00058156-exon-scaffold_307-1491911889:86507..86683 | TCONS_00058156-exon-scaffold_307-1491911889:86507..86683 | Clytia hemisphaerica | exon |
| TCONS_00058156-exon-scaffold_307-1491911889:84736..85790 | TCONS_00058156-exon-scaffold_307-1491911889:84736..85790 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_307 | supercontig | scaffold_307:84736..86683 - |
Blast
The following BLAST results are available for this feature:
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