TCONS_00058220 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058220
Unique NameTCONS_00058220
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4122

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058220 ID=TCONS_00058220|Name=TCONS_00058220|organism=Clytia hemisphaerica|type=transcript|length=4122bp
agaaaattttccaaatcccccatttcgattaatgcaatgaaaaatgaaac
ttttctatgtttcacttttttgcacctattcttcaaaatgaaaatattta
agagtTTAAGTTCTTCTATTaaaaattcaatgattttttacggcactttg
ttgacaatctaactctcacatcaaattcccgctttcttcagtaaattgaa
gatgagaaaaaacctaagccacggatcatggattgaaacaaatatatgaa
gggtagGATTTTACAGCTGCCCgttgtgcaaggcactgaaaggccacatg
tgccaaaaagaagggccgtttgaaatgcaGCAACCTTGcattggtggaaa
tttaataaacagctgcgaagcagctgggaagcaatcagtagaagagacca
ctttcgtttctgttgcagatttctaataaaaacttctctcagggactact
tgtcaatgtacatgtacacatgtgttgtgtcaacttgtcagcattgtatt
gttgtaaaggaaaagataaaacaggtaagactagcctagtttctaatcgt
gatataggagtttaagtttagactgacaGGTATGCACTGAAACTAATTTA
GAGACTCAGTCCTGCTAAATTGAGATGTCCATTTTGGGTGTGATAACACT
TTTTGAAGCgaacacaaaacaaaaataagaaaatcccgGAAACTTTTTGG
TAGAAACCAAAAAACTGGGGAAACCTTATCtgcaaaaatagaaaatgtGT
GAGAAATCAAATTGATCATATACTTAAATCAGACTTTACTAGTGGAATTT
CTCAAATTGCTAAAAGTttctgaaaatcttattttgttaCCATATCTTAC
CAGTAAACCATACCAATCAACAAGACCAAAAGTTGGATTCAAAGAATCAT
TAAAAGGAAAACAGGGAAAATATTGGAGACCAGATTTGACTTTTTCTGAT
CATTCCCTAAAAGAATGTCTTAgaattcacagaaaatcaaccTTCTAATA
GAcatgatgaatgaaaatttgttAACTTTCAAATTTACTACCCACAGAAT
GAACAATGTTTAAGTGGACTGAAACCATATGATGCCTTTTAACAGGCGTA
CACATTTTACCCTCATTTTACCCTGAAGGAAATCGTTTGACCCCATAGGG
GTTGGAcgaaatgatgattttgataTTAGCTAGCATGTGGAATGTTAATA
CCTAATTATGTAATATGATTTGATATGAATTAAGAATTAAATGTCCGAAA
TCATACTTTTATGAAATGGCTGTTATAAACATTACAAATAAAGTGTCCTG
TTATGAGATTTGCAACTTATTAAAAGGGGAGCTCAGCTCACAACTGTTAC
TCTAcggaaaataaaaagtttacaaaCTGCTGTACAGTGTTCTGTAGTGt
caaagaattctttttttacaagatttaatttatttcatctGAAACATATG
TTTGGCCCCTCTTTAAAATATGAATTGTTTTCGACAAGGGGATCATTTTG
AAGGAGTTATGTTTTAGGGCTGGTGTGATATTTGTGTTTTGCTTTCTTCA
AAGAGAATTATTTATTAGAATAGACAATTTACTAtgttttggtttctttt
ttaGTTGAAAAGTTCATGTTTACAGATAACAATTGTCTTTTCTTGAAaga
ttagaaaaattttcctacTAGCCCATATTCTTCGTAGGGACAAGAAATTC
AAGAGTCATGTTGTGAAATTTCCTGTATGTTCATGAtaatgcaccactgg
agagtcttctgagaacttttaaaatttcccacccaatacgtcacttatag
aaaaaatgacgtattgctattgggtggaacaaaaacagaaaagttgcata
atttcgtgaagtcattttagtggtgcatatcatgaattgagtTTCCTGTT
CTTTTTATAATCAAATGGAAATCTTACATCAAAAGTAAGTTACTACTTAC
TACCTTAATAAATTTGATTCCAATTACAAGATAATGATATGTAATCAGCT
TATATCTCTTATTTAAcgttttagataaaaaatccaTTATTACAGAGAAC
TTTAAGTCAGACATCTCTGCACTTTTTAGTAGCAGAAAAGGTATGTCTCG
GCTACGAACAACTGTATCCAAGCTATTAACCCTTGGTGGTTTAACTGTTG
CTTCAGGAAGTACACTTGCATATTATCGATATTCACTTTTGGGAGAAAAT
GCTGAATGCAGGCCACATGCACCAAATGTAGAATTCAAAGATACAGACAC
AATCGTTTCTGAACAGAAATCTCAAAAACCTTGGGATGATGATTGGGACC
GTCGTAAACAAATCCGtagtaagaaacttaaagaaGACCCACCTATTGTT
GTCCTTGATAAAGACGGTGACTTGAACACTATACCTGCAACACCACCAAA
GCCTGTGGAACGAAAACCTACCGCTACTAGACACGTCATTTTAGTTCGCC
ATGGTCAATATGAAATGGACCACACTGATAAAGAGAAGAAAATCTTAACT
CAACTTGGAagagaGCAAGCGTCAGTCACAGGGGATCGTTTAAAAGCATT
AAACATCAAGTTTTCACGAATGACTGTATCTACAATGGTGCGAGCACGTG
AAACAGGAAGCATTATCAGTGAGAAGATACCCGACATTCCTCAAGAACAT
TGTTCTCTGTTACGCGAAGGGGCGCCTTATCCACCAGAACCAACCAGTAA
AGCCTGGACACCAGATCGATCGACTTTCTTTCAAGACAATCCACGAATCG
AAGGTGCTTTCCGAAAGTACATCCATCGTGCATCACCATCGCAAACAGAG
GATAGCTATGACTTGCTTGTTTGTCATGGCAACGTCATCCGATATTTTGT
TTGCAGGGCACTGCAATTTCCGCCAGAGGGTTGGCTTCGAATGAGCACAG
GAAACTGTGGTTTGACCTGGCTGACGATTCGACCCAACGGGAACGTTTCT
TTACGGAGCTTCGGGGATACGGGACACTTGCCCCCAGAAATGGTCACATT
TACTTAGATATAATTGTATGGTAGATATTGGAGAACTAGAGAATTTTTAA
CTGAGAACAGAGGTGACGGACAGTGTTTGCATTCTCGATTCGTATTGCAC
TACGCTAATTTGCAATGCGACACGCCTTTTccaccgtagccaccaattgc
cgcgcgggcattttttcgttcgttttatcccactaaaaccgtcccagtcc
ttttttcgcactagacaatagaaaatacgtcaaaaatggATTGGGACgag
cgactacggtcgaaaaggtgtattggcaTTGGAATGTTTCGAATGGACGG
AGAATCTAATTGAAACCCGAATATGATTTGACGTTTGAATTGAGATGTGA
TGGGATTGACAGTGCGAATCAAGAGAAGAGAGATGCTGTACCTGTTAAAC
AGCTTTGAACAAATCGGCAttttatgaaattaattttttaaatctcgGCC
AGAATTTCAGAACGTCTCTGGAAAAGTCGTAAAAGAAATAGACTATTGAG
CTacagaaaaatggaaaaaaatatggGCAGATTGGATGGTGATGGTTCTT
AAAACCTGAATGAATGAACTTAATGTGGCGAGAACTTGGATATGCTGAGT
GTTGAtgaaattcttgatatgcgtaagtcaatatgacgtcatattttttt
aacggaagcactcgaaaaaagccggattttgacTTCCGTGTtcctatttt
tagtaacagagaggggtCTAATCCCggattttttcgggtgtttccgctag
aaaaatgacttacgcatatcaagaataattagattttaaatttttttaaa
gatttactTTCAATGTAAATATCATTtggtggacattcttataaaaaaat
ctaaagaaaatttgggtggatattggtttatcattattgttattattatt
ttttagatatGATTTTCTTATAGTAAAATTGAAAACGAATTGTCAAgttt
aattttgctttttttagtggagtactctcgggtacctaatagccgccccc
cccctaattaatttttgggaaaatgtttttggaaagttccctcttttgtc
ctaattcagctgtattagcctccttttcaaaaattttccacccaggacat
ttttattccaacccccccccNN
Run BLAST on NCBI

transcript from alignment at scaffold_309:192033..198439+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058220 ID=TCONS_00058220|Name=TCONS_00058220|organism=Clytia hemisphaerica|type=transcript|length=6407bp|location=Sequence derived from alignment at scaffold_309:192033..198439+ (Clytia hemisphaerica)
agaaaattttccaaatcccccatttcgattaatgcaatgaaaaatgaaac ttttctatgtttcacttttttgcacctattcttcaaaatgaaaatattta agagtTTAAGTTCTTCTATTaaaaattcaatgattttttacggcactttg ttgacaatctaactctcacatcaaattcccgctttcttcagtaaattgaa gatgagaaaaaacctaagccacggatcatggattgaaacaaatatatgaa gggtagGATTTTACAGCTGCCCgttgtgcaaggcactgaaaggccacatg tgccaaaaagaagggccgtttgaaatgcaGCAACCTTGcattggtggaaa tttaataaacagctgcgaagcagctgggaagcaatcagtagaagagacca ctttcgtttctgttgcagatttctaataaaaacttctctcagggactact tgtcaatgtacatgtacacatgtgttgtgtcaacttgtcagcattgtatt gttgtaaaggaaaagataaaacaggtaagactagcctagtttctaatcgt gatataggagtttaagtttagactgacaGGTATGCACTGAAACTAATTTA GAGACTCAGTCCTGCTAAATTGAGATGTCCATTTTGGGTGTGATAACACT TTTTGAAGCgaacacaaaacaaaaataagaaaatcccgGAAACTTTTTGG TAGAAACCAAAAAACTGGGGAAACCTTATCtgcaaaaatagaaaatgtGT GAGAAATCAAATTGATCATATACTTAAATCAGACTTTACTAGTGGAATTT CTCAAATTGCTAAAAGTttctgaaaatcttattttgttaCCATATCTTAC CAGTAAACCATACCAATCAACAAGACCAAAAGTTGGATTCAAAGAATCAT TAAAAGGAAAACAGGGAAAATATTGGAGACCAGATTTGACTTTTTCTGAT CATTCCCTAAAAGAATGTCTTAgaattcacagaaaatcaaccTTCTAATA GAcatgatgaatgaaaatttgttAACTTTCAAATTTACTACCCACAGAAT GAACAATGTTTAAGTGGACTGAAACCATATGATGCCTTTTAACAGGCGTA CACATTTTACCCTCATTTTACCCTGAAGGAAATCGTTTGACCCCATAGGG GTTGGAcgaaatgatgattttgataTTAGCTAGCATGTGGAATGTTAATA CCTAATTATGTAATATGATTTGATATGAATTAAGAATTAAATGTCCGAAA TCATACTTTTATGAAATGGCTGTTATAAACATTACAAATAAAGTGTCCTG TTATGAGATTTGCAACTTATTAAAAGGGGAGCTCAGCTCACAACTGTTAC TCTAcggaaaataaaaagtttacaaaCTGCTGTACAGTGTTCTGTAGTGt caaagaattctttttttacaagatttaatttatttcatctGAAACATATG TTTGGCCCCTCTTTAAAATATGAATTGTTTTCGACAAGGGGATCATTTTG AAGGAGTTATGTTTTAGGGCTGGTGTGATATTTGTGTTTTGCTTTCTTCA AAGAGAATTATTTATTAGAATAGACAATTTACTAtgttttggtttctttt ttaGTTGAAAAGTTCATGTTTACAGATAACAATTGTCTTTTCTTGAAaga ttagaaaaattttcctacTAGCCCATATTCTTCGTAGGGACAAGAAATTC AAGAGTCATGTTGTGAAATTTCCTGTATGTTCATGAtaatgcaccactgg agagtcttctgagaacttttaaaatttcccacccaatacgtcacttatag aaaaaatgacgtattgctattgggtggaacaaaaacagaaaagttgcata atttcgtgaagtcattttagtggtgcatatcatgaattgagtTTCCTGTT CTTTTTATAATCAAATGGAAATCTTACATCAAAAGTAAGTTACTACTTAC TACCTTAATAAATTTGATTCCAATTACAAGATAATGATATGTAATCAGCT TATATCTCTTATTTAAcgttttagataaaaaatccaTTATTACAGAGAAC TTTAAGTCAGACATCTCTGCACTTTTTAGTAGCAGAAAAGGTATGTCTCG GCTACGAACAACTGTATCCAAGCTATTAACCCTTGGTGGTTTAACTGTTG CTTCAGGAAGTACACTTGCATATTATCGATATTCACTTTTGGGAGAAAAT GCTGAATGCAGGCCACATGCACCAAATGTAGAATTCAAAGATACAGACAC AATCGTTTCTGAACAGAAATCTCAAAAACCTTGGGATGATGATTGGGACC GTCGTAAACAAATCCGtagtaagaaacttaaagaaGACCCACCTATTGTT GTCCTTGATAAAGACGGTGACTTGAACACTATACCTGCAACACCACCAAA GCCTGTGGAACGAAAACCTACCGCTACTAGACACGTCATTTTAGTTCGCC ATGGTCAATATGAAATGGACCACACTGATAAAGAGAAGAAAATCTTAACT CAACTTGGAaggtttgtttatttgatttttgtaaTTTAGTTATTTCCGTA GGCCTCGTTAGGGTATGTTAAAATCATCTGAAAGTATATTCGGGATGTAA GTTTTTACCAGTGCTGGAAATAAGGAAATTTCATGAATTCATCTTAAGAt aatactgaggttaagcataccaggataatcacgacgacggacgaaaagtg taataggctagtgaaaatacgaaatttgattggttgaaactcactagcct gttaaattttcgttcgtcgtcgtgattataccgatttacttaacctcgct aatattCAAAGTAGATCAAAAATTGGTAGATTAATATTTACGAAAGAAAC CTATAAGACATTTAACCGGAGAAAGTGGAAAAGTAAGCTTCAGAATGACC GGTAGAAACTACGAAGTGACCGGGTAATTACTCGccaccggccgttattt gcagcactgcttTACAACTGTCCCCGACAGACCGGCTGATTGGGATTTCT ACTAATTTAGACTTGTAACCATAACCTCCTTAAAAATAAGattcataaat tattttattttcagagaGCAAGCGTCAGTCACAGGGGATCGTTTAAAAGC ATTAAACATCAAGTTTTCACGAATGACTGTATCTACAATGGTGCGAGCAC GTGAAACAGGAAGCATTATCAGTGAGAAGATACCCGACATTCCTCAAGAA CATTGTTCTCTGTTACGCGAAGGGGCGCCTTATCCACCAGAACCAACCAG TAAAGCCTGGACACCAGATCGATCGGTATGTTTCATTGTTAAACACACAT AGTTgtccttttctttttatagtgttctttcaagttaaatttttacatta gcAGTCACACAAGTGTCTGTATTTAACCGAAAGAAATCAATAATGCAGTT AAATGTTCGTAGATATTCAGATAATTTAAAACTGTTGGTGTTGTTATTTT ATGACTAAATTAAAGGAcccttttggacctacctggaggtcctataaatt aacccatgtccgttcgttcgttcgtccgtctgttaccagcttttctcgag attggctcgttagttttctctgatttttggcacaaaggcgCAAAATAGTA ATTTTCCGGTattaaatcatcaaaaacaggtGTGTGGAGTGGTCTTTCGA AAAGCATTGAGAGCAGTTGACAGTTGATTGAGAAACGGAACGTTGCCTAA CCGTGACAACCGTAGATGTACAGGATAGGACCTTGACGGACTGATTTTCT TCTCGAAAAAATAACCTTAATCTACTGTTTTTCAGCAGACTTTCTTTCAA GACAATCCACGAATCGAAGGTGCTTTCCGAAAGTACATCCATCGTGCATC ACCATCGCAAACAGAGGATAGCTATGACTTGCTTGTTTGTCATGGCAACG TCATCCGATATTTTGTTTGCAGGTAACGTCGATTTATAAACCagtttttc aagttttgttttCACAGTAAAAAGGTAGAGTGCCCCTGAAAAACGTATTT ATGGATTGGATGGGCCTGGTCAATTATTAGAGTTTTCATGTTGCTTAAAG TCTTTTCATTTTCCTGGAACACCAAGTTTGATGATGCCCTTTCTCAGAAA ATATAATCATCTGTAAAAATTAATTCAATTTGCTCTGCAATCTGTTCTAA ACTTAAACTCTTTTATTTTATCATACTATTATGGTAGCTGTCTCGAGGAG CATTGTGTGCGTTCAAAAACACTTAACCGGCGTTTGCAACGACAGGAACC GTCTAGTTTGCTCTAAACCAGGGGGGNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NCCCATTTTAGGATTTAACTACCATGGGTAGTAAAggtttttttcgaatt ttcgtcacaccaccaccatagtaaacgtcattatgtctgagattttacta ccgacccccccctgtcTAAACTGAAActcattcatttttggaaaaaaatc gcgaGAATGATCTTTCAATTTCATACTTTTATACATTTCAGGGCACTGCA ATTTCCGCCAGAGGGTTGGCTTCGAATGAGCACAGGAAACTGTGGTTTGA CCTGGCTGACGATTCGACCCAACGGGAACGTTTCTTTACGGAGCTTCGGG GATACGGGACACTTGCCCCCAGAAATGGTCACATTTACTTAGATATAATT GTATGGTAGATATTGGAGAACTAGAGAATTTTTAACTGAGAACAGAGGTG ACGGACAGTGTTTGCATTCTCGATTCGTATTGCACTACGCTAATTTGCAA TGCGACACGCCTTTTccaccgtagccaccaattgccgcgcgggcattttt tcgttcgttttatcccactaaaaccgtcccagtccttttttcgcactaga caatagaaaatacgtcaaaaatggATTGGGACgagcgactacggtcgaaa aggtgtattggcaTTGGAATGTTTCGAATGGACGGAGAATCTAATTGAAA CCCGAATATGATTTGACGTTTGAATTGAGATGTGATGGGATTGACAGTGC GAATCAAGAGAAGAGAGATGCTGTACCTGTTAAACAGCTTTGAACAAATC GGCAttttatgaaattaattttttaaatctcgGCCAGAATTTCAGAACGT CTCTGGAAAAGTCGTAAAAGAAATAGACTATTGAGCTacagaaaaatgga aaaaaatatggGCAGATTGGATGGTGATGGTTCTTAAAACCTGAATGAAT GAACTTAATGTGGCGAGAACTTGGATATGCTGAGTGTTGAtgaaattctt gatatgcgtaagtcaatatgacgtcatatttttttaacggaagcactcga aaaaagccggattttgacTTCCGTGTtcctatttttagtaacagagaggg gtCTAATCCCggattttttcgggtgtttccgctagaaaaatgacttacgc atatcaagaataattagattttaaatttttttaaagatttactTTCAATG TAAATATCATTtggtggacattcttataaaaaaatctaaagaaaatttgg gtggatattggtttatcattattgttattattattttttagatatGATTT TCTTATAGTAAAATTGAAAACGAATTGTCAAgtttaattttgcttttttt agtggagtactctcgggtacctaatagccgccccccccctaattaatttt tgggaaaatgtttttggaaagttccctcttttgtcctaattcagctgtat tagcctccttttcaaaaattttccacccaggacatttttattccaacccc cccccNN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036688XLOC_036688Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058220-exon-scaffold_309-1491911889:192033..194543TCONS_00058220-exon-scaffold_309-1491911889:192033..194543Clytia hemisphaericaexon
TCONS_00058220-exon-scaffold_309-1510915933:192033..194543TCONS_00058220-exon-scaffold_309-1510915933:192033..194543Clytia hemisphaericaexon
TCONS_00058220-exon-scaffold_309-1575043694:192033..194543TCONS_00058220-exon-scaffold_309-1575043694:192033..194543Clytia hemisphaericaexon
TCONS_00058220-exon-scaffold_309-1491911889:195097..195307TCONS_00058220-exon-scaffold_309-1491911889:195097..195307Clytia hemisphaericaexon
TCONS_00058220-exon-scaffold_309-1510915933:195097..195307TCONS_00058220-exon-scaffold_309-1510915933:195097..195307Clytia hemisphaericaexon
TCONS_00058220-exon-scaffold_309-1575043694:195097..195307TCONS_00058220-exon-scaffold_309-1575043694:195097..195307Clytia hemisphaericaexon
TCONS_00058220-exon-scaffold_309-1491911889:195821..195954TCONS_00058220-exon-scaffold_309-1491911889:195821..195954Clytia hemisphaericaexon
TCONS_00058220-exon-scaffold_309-1510915933:195821..195954TCONS_00058220-exon-scaffold_309-1510915933:195821..195954Clytia hemisphaericaexon
TCONS_00058220-exon-scaffold_309-1575043694:195821..195954TCONS_00058220-exon-scaffold_309-1575043694:195821..195954Clytia hemisphaericaexon
TCONS_00058220-exon-scaffold_309-1491911889:197174..198439TCONS_00058220-exon-scaffold_309-1491911889:197174..198439Clytia hemisphaericaexon
TCONS_00058220-exon-scaffold_309-1510915933:197174..198439TCONS_00058220-exon-scaffold_309-1510915933:197174..198439Clytia hemisphaericaexon
TCONS_00058220-exon-scaffold_309-1575043694:197174..198439TCONS_00058220-exon-scaffold_309-1575043694:197174..198439Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_309supercontigscaffold_309:192033..198439 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.6604 9.2166 7.18578 7.43377 39.0765 31.3542 24.7979 27.9908 16.7683 21.2913 29.0304 15.2614 16.6759 15.2816 12.2703 10.8321 16.7894 16.3199 9.22985 13.0627 14.4302 15.5817 16.877 16.1519 14.6579 18.9744 5.63014 4.77323 9.55704 11.6067
Blast
BLAST of TCONS_00058220 vs. Swiss-Prot (Human)
Match: PGAM5 (Serine/threonine-protein phosphatase PGAM5, mitochondrial OS=Homo sapiens GN=PGAM5 PE=1 SV=2)

HSP 1 Score: 232.261 bits (591), Expect = 1.408e-67
Identity = 124/298 (41.61%), Postives = 172/298 (57.72%), Query Frame = 2
Query: 2120 KLLTLGGLTVASGSTLAYYRYSLLGE-----NAECRPHAPNVEFKDTDTIVSEQKSQKPWDDDWDRRKQIRSKKLKEDPPIVVLDKDGDLNTIPATPPKPVERKPTATRHVILVRHGQYEMDHTDKEKKILTQLGREQASVTGDRLKALNIKFSRMTVSTMVRARETGSIISEKIPDIPQEHCSLLREGAPYPPEPTSKAWTPDRSTFFQDNPRIEGAFRKYIHRASPSQTEDSYDLLVCHGNVIRYFVCRALQFPPEGWLRMSTGNCGLTWLTIRPNGNVSLRSFGDTGHLPPEMVT 2998
            + L L    +A GS    +    +G+     +AE RP  P             +     WD +WDRR+ +    +++     V   + +L +      K    K  ATRH+ L+RH QY +D + ++ + LT LGREQA +TG RL +L +KF+++  S+M RA ET  IIS  +P + +    LLREGAP  P+P    W P+   +++D  RIE AFR YIHRA   Q EDSY++ +CH NVIRY VCRALQFPPEGWLR+S  N  +T L IRPNG V+LR+ GDTG +PP+ +T
Sbjct:    5 QALQLAACGLAGGSAAVLFSAVAVGKPRAGGDAEPRPAEPPAWAGGA------RPGPGVWDPNWDRREPLSLINVRKRN---VESGEEELAS------KLDHYKAKATRHIFLIRHSQYHVDGSLEKDRTLTPLGREQAELTGLRLASLGLKFNKIVHSSMTRAIETTDIISRHLPGVCKVSTDLLREGAPIEPDPPVSHWKPEAVQYYEDGARIEAAFRNYIHRADARQEEDSYEIFICHANVIRYIVCRALQFPPEGWLRLSLNNGSITHLVIRPNGRVALRTLGDTGFMPPDKIT 287          
The following BLAST results are available for this feature:
BLAST of TCONS_00058220 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PGAM51.408e-6741.61Serine/threonine-protein phosphatase PGAM5, mitoch... [more]
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