TCONS_00058228 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058228
Unique NameTCONS_00058228
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2012

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058228 ID=TCONS_00058228|Name=TCONS_00058228|organism=Clytia hemisphaerica|type=transcript|length=2012bp
tgttatgtttcaaaattagaataaaaaatacCTTCCGAAGAAATTAAGAG
CTTGACCTTTGTTACAGTGTTAAAAAAATTGGGGATTGTTTGCATTTTTG
TTGGACGAATATTTTGACATTATGACAATTGATGTAAAGGATATTCAAAT
CATTAATAAAGCTATTCCACCATCGACGCCAGGATGTCAACCCTATCACG
CAACACCGCATTTCCATGGCAGCTCTAAATCTTTAAACATGATCGTAGGG
TACAAAACCACACCTCAGTACCCACTACACGCTATTGATACTCTAAGCCA
AAGAGACGTACACAATCTAGTTTCATATACCGGCGAATTAAATTATAACA
CAGCGGGAACTCCACATGGCAGTAATAAAGATATTCGAAGTCTTTATTCA
ACAGAAGATCACCATAATGTCAATAAAATGTATTTACCAAGTCGCCAGAA
TTCGATCATCTGTGCGCAGAATCCAAGATTTTCAACATACGGATATCCAC
ATACGGTTGTATTGAGTCAAGGTTCATCAGAACTGGAGAAACACCAAGCA
GCAGACATACCAAATTATGGAAAACTTGCCTGGTTTGCTTGCATATTCTT
TTTTCCTCTTGGTTTGATTGCACTGAAGAAACATTACGAGACACGAAAGT
TTCGTTATCGGAACCCAGACAAAGCACGAGCAGCATCAGACGTGACTCGA
TTCTTTGGAGCGTTTTCTATTCTTCTTGGAATTGTTCTTTACGCTCTAAT
TGTTGTAATTCGATTACGTTTATCTTACGAAAATGGTGAAAAGTTCCTTT
GAAAGAGATTATTAACTGAAGAAGCATTTTAGCTTTAAGGAGAAGCTGTG
AACTGGTGAAATATTCAATGCTGTTAACAGCAATTCATGAAATGACTTCC
CAGCTGggacacaacgttgttttaacgttcaaataactttatttggacgt
tattaatgtcacatggacgttgctttgacgttgtgtgccgtctgggttAG
TAGTAGGTCTAATAACAATCTGATTGACctgacaaaataatttttgtgaG
AGCTATCAGATTCATCACAAAACGAGCTCAGGNCGACCTGACAAAATAAC
TTTTGTGAGAGCTATCAGATTCATCACGAAACGAGCTCAGGGACTGGGTA
TGAATTTGTTTTAATGCTAAGAGATTATCGAATCATTGGTCCCCAaaaag
aagaacatcaaaaaggACATCAATATGACCTCCATAACGTTGTCAGTCAA
CTGGGAAAGGATTTAGATACAAAGGACAAGGGGTATGGAAGCTCGAAGAA
ATCTAAGATTCTTAATaacgaaaattttctttgttgtaAATGAAATGGTG
AAAATTAGAGAGGAATCATACGGATGAGAAATGTAAACGGATACGGATGT
AAACGTTAATCGTTTTTTGCTATTTCAGATAATTTATACAGTGTTGGAAA
TGTGCTTAACGGTAAACACACGTTATTAACATTACCGTTGAGAATTGTTT
Gctggtcatcaaaatacataatcttataatattttaaatcatttacctta
tcggccaactTAAGTCAGCCCTacgtttatgtttcttttctttaaagttg
atgcaaagtagtacaatgtgtacttagctcgaggctaatcaatatcaact
ttTAATTACAAATCTATCTAAAAGGTTGATACTCAAGATCAActattatt
tacaaattaatttaaattcaatcaatGAAACCAACGCCATGGATAAAAGT
ACGACAGTTTCGGCAAGGACAAGTAGTGGGCCCCCATTGCTTGATTTCTT
ATTTAAATTCATCTAggcttttaagttttttaaagttatCGGGAAGGGTA
GCCCAGATTTTAGGTCCCAGGAAAGCTAAATACGATTTCCATTCATTTCA
CTTTCAACTACTCTACTACGAAAGGAATTCCTTTTTCTCGTTTTGATCTT
ACATtggtttttgagaaatattttactttctgattcattgagttttgatt
taaatagctCTG
Run BLAST on NCBI

protein sequence of TCONS_00058228-protein

>TCONS_00058228-protein ID=TCONS_00058228-protein|Name=TCONS_00058228-protein|organism=Clytia hemisphaerica|type=polypeptide|length=226bp
MTIDVKDIQIINKAIPPSTPGCQPYHATPHFHGSSKSLNMIVGYKTTPQY
PLHAIDTLSQRDVHNLVSYTGELNYNTAGTPHGSNKDIRSLYSTEDHHNV
NKMYLPSRQNSIICAQNPRFSTYGYPHTVVLSQGSSELEKHQAADIPNYG
KLAWFACIFFFPLGLIALKKHYETRKFRYRNPDKARAASDVTRFFGAFSI
LLGIVLYALIVVIRLRLSYENGEKFL
Run BLAST on NCBI

transcript from alignment at scaffold_309:359421..366655+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058228 ID=TCONS_00058228|Name=TCONS_00058228|organism=Clytia hemisphaerica|type=transcript|length=7235bp|location=Sequence derived from alignment at scaffold_309:359421..366655+ (Clytia hemisphaerica)
tgttatgtttcaaaattagaataaaaaatacCTTCCGAAGAAATTAAGAG CTTGACCTTTGTTACAGTGTTAAAAAAATTGGGGATTGTTTGCATTTTTG TTGGACGAATATTTTGACATTATGACAATTGATGTAAAGGATATTCAAAT CATTAATAAAGGTAATTACAGTTTTGTTAATTTGGAAATACTAATTAATG TTAATTAATTGTGCGCTACAGTAGTCACCATTGACTTTCAAGCcggaagg gctagaggcgagactcctggatgggaaatgaaaccacttactttaggcgt acaaactttcgcgagcagaaactttcgcgaggacgaaaaatcgcgaaatt cacgacatttactttcgcgaatttaacggaaaaatattNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgaatggcccttcctagaa tttttaaagacatttactttcgcgaaaagggccaaaattcgcgaaaatcg cgaaagtttctgctcgcgaaagtttctacacCTAAAGTATTTCCCATACA GAACGCTCGCGCGAAGTCTTTACAAAAACGCCGGATTAAATGTAAAATCt gtcgctagatttcaaaaaatgcactcctcaaaaacaaaggaaccgctaga tacaatccgtcgtcatgattgtagcgcgttctaggcgcgttctggatggg aaatgaccTACATGGGAGGATAGAGATTCTACTTTAGactttcgggcttt aaactctaTGGCCGTAGCACAATGATAGAAGGTCCAGCTACGGTGCACAA GTTTGTGGGTTCGACCAAACATTTAGTAAAAATGATACTCTGATGTTTCT CTGCTTGATGCTAAGGCAACTGATGGATCAAGAGAGAGATCATCAAAGAA ATGGAGCAAGGGTAAAGCGGAGAAATCCAAGGAAAGGAGTGGTGCCTTAA CCTACCTTCAGAGAAAAGAGAGCCTtataacatccaaaattttataTGCT TCAgatgttctaaacttttttactttttaagcctatgaatattcttaaga tgttcttattttcacctttttgcgAGTACTTTTGTgtgatttcctaagaa attcggtccgcgaagccttaaatattcttaacttgctcttaatattttgg ccatcagcCATCAGCCTTATGTTATATATactttgttctaataaaaacgt gtacttaTTTCGTACGGTTTGCCGAAAAAAACTTTGTTCCTTTTTTCAAA AGACTGACAGCCCGTACATCACAGTTTTTTACTACTGATAATTCAAGATT ACTTTGGGAAATTTATAAACGAAAAACAGAGTTAAGCCAGTGAGTTAAGC TCTAGCTAAGTGGTCGGCAACATCAAAGAAACTAAACGGATACTTAAAAG GCTCCTTCAAGAAGACACTTTTAGAAAATAGAATGATCTTATTTTGTAAT AAATCACAAGTAGGTTTGTTTATAACTTGAAGCCTCACTAAGTATGTGTT TACAAATTAAAATTATGTGATTTCAATGAGAATCTTATAGGTTCAGGAAA TCTCAATTTAATCCTGGACAACTGAAATCGTGCGTGTGAGAATCACACCA AAGAATAGTTGAATGGAATTGTTATGAAACAGTTTGTCAATACCACAAAT TTTGTCCATGCGTAAAGTATCCTATTTGCCAAAGTCGTATTTGAAATtat aaataaattgaaagatTCTAATTTGCAATACATCCCCGCTGGCATATAAC GTCAAATAAatgacacacaacgttatttcaacgttcatctaacgttatat agacgttgtgaacattaaaggttttgtttttacataagtgttcccgtttc atatcagacacatatttcatatcaggacagtgcctGCCTATCactgattt aaaaaattctaccgggtctgtgagaagggagtgtagTTAAATGTGTAGTA AAACCTCATTCCTACCCTAACTTTTCCTGCGTGATATCCGCGTCTCAATC CatactggcgtgccagtctaaatATGTTCTAAGCATAAAGAAAAATTCAC GCCGTTAAAGCTGGAATCTCAGGAGTATATTTTGACCATATTTTTAGATT TCCTATAGCCtagaaaacgctatattgccaaaAACCCGTGTGTCTTAGCC TactgaatacgggcttagttaactaggctttCTCTGTATGGTGAGGATGA GGAAATCGAAAATGTATAACCACTTCCAAACATATCGTCAAGCCCTCCTT TCACAGCTTCCCTTCCATTATGCGGGTTATACCACCTCTCTCGCTCTCTG CATGGCAGGATTTTCTAtattacaatcatggtcgtaatatttgagaaaaa agggaaatccaccgggaagttttgaaaccacaatcaatttgtaagtgctc taaagtaggttggaagtgtagagttttaactctgagttttaacgcgagac ttaagacttgaggatctgaggatctgaggatcctaaagttcaaaaatagt ccaataaggctcagaatatagcctggaagtctgccaacccatccccaatt gaaatattcgattaagttaaagagatagcccaaaatggactttctcgcca gaactttaaatcttgaaaaacgttaaaataaccggaattctcattctatt tcgacctTGATTGTAGCTCCTCTTTATCTTATTTTTCCTGTAGCCAAATG ATCTCAATTTAGTCTGAATAACGTCACATGACGTCACATTATGACTACGC AATCAGCGCTCCGCATAACCATAGTCCgtaaaaaccctggtctggaagct tatttttttaacttttttgttagctttttcctttgttgctatcaaaaaat aaagatcaatttgctcagtttttgatcaagTTTTTGACCAAGTAcccctc ttgggattggtttaagattcaatcacatgatcaaaaagtgagcgaaacaa acgcaagttcaagtaagaaacaatggaaagacacAAAAGGCTTCCGCAAA ccgggttttttatacggactatatGGCGTAACCGACCAATTTGACCACGT TCNGAATGGAAAGACACaaggttttttatacggactatggcgTAACCGAC CAATTTGACCACTTTCAAGCAGTACTCCTCTCCTCTTATCAGTAACATCT TCTATATAATATTTGATATTTCTCAGCAAATGCCAAACTCGTTCTCAATC CTTTAGAtcgcttttttatgattctgacaGCGCTCACGATTGTATATCAA GTTCaccagtaaaatcaaaaagtgatgCAAATGGTTCTGGGTACAAGATT GAGATCATTTTACCTATTCCTTTTTTTACTTCTAGCTATTCCACCATCGA CGCCAGGATGTCAACCCTATCACGCAACACCGCATTTCCATGGCAGCTCT AAATCTTTAAACATGATCGTAGGGTACAAAACCACACCTCAGTACCCACT ACACGCTATTGATACTCTAAGCCAAAGAGACGTACACAATCTAGTTTCAT ATACCGGCGAATTAAATTATAACACAGCGGGAACTCCACATGGCAGTAAT AAAGATATTCGAAGTCTTTATTCAACAGAAGATCACCATAATGTCAATAA AATGTATTTACCAAGTCGCCAGAATTCGATCATCTGTGCGCAGAATCCAA GATTTTCAACATACGGATATGTGAGTATTAAATACTTTCTCCAACTTCAA CATCAacgtcaactctctctaattcgaacttctgttattcgaatctttct gtaaagcgaactaaaatatttctcCCTTCAGCTTAAAAGTGGTTTAAAAT ATTCTCTGTtactcgaatctttctctaattcgaagaataCTTTTGGTCTC ATAAAGATCGAGTTATAGAGAGTAAATTGTACTATCTTTTGGGATTTTAA TCTAGAAAGAAATACTGACACAAGTCAGTCTAATCGAAAGCcaaaaatag aactttttaataCTCTTTTGATTCGTATTAAAAGCTCCATTTTAAAAAAA TCGACTAGACTGCAAGTTTCTGGAGTTTCACTGACAAGAGCAATTTCTCC GAATGAAAAAAAGTCTTCTACTATCTAATCTATCCTTTTGCCCTCCCTGT TCATATCAAGTAGACCTAATTTCAAAGTATATGTATTCCCGTACGGTAAA ACTTTATCATTTTTCCAACCTCGTTTGAATGCCTAATCCCTTTTTTTAAG GGCTAGGTGTCATGCTTTAAGCTCTTCAAAGcaacaaaaattgaatatcg caaaaactattgctgttatttttttcaaacaccCGCAAAGCTTCTTACTG GTCAAGCGCTGagattctattgtaatgtcacgtgacctaggtaggatttc ctacgaaagcacgacatctagcccttcgggctttataaatctgtggatTA GCCCTGTAGAGAATGATAAACATGACATAAACATTTAGAGATAACGCAAT ATTTTCCAAAATCCGAGACCTGGGCCAAAACtcatcaaataaataaaaac gtCGATGATGTTCGCCCTGGGATCAAGGGTGttgttttaagtcaaaatta aaattgaaagttcGACTTACCGAATCTATCTTTTATTGACGAATTTCCCC CATCTTTCTTTTCACCAACATATTTAGCCACATACGGTTGTATTGAGTCA AGGTTCATCAGAACTGGAGAAACACCAAGCAGCAGACATACCAAATTATG GAAAACTTGCCTGGTTTGCTTGCATATTCTTTTTTCCTCTTGGTTTGATT GCACTGAAGAAACATTACGAGGTAAAATGAATTTCATTCAgataactaaa gtctgtcccaATATTCCTTTCATTTTCTAATTCTAAATCTCGCTAAATCT TTTCTATCTCATAATATCCTACTCCTtactatcttttcaacaagcaaaaa atcactAATCGAATTCTATATACTATCAAAAATTACATCCTGTTCTTACT GCACTATTTGTGAGTATTGTTGGTGTTTTTTTGGTCCGCAAAGCCGAatt aatgttcttaatttgttcttaatattttagtcaacgaagccttatgttct tgtatagttttttcttacataaaaagcgtgtatataaTCTGAATATATCT GATTCCGTTACAGACACGAAAGTTTCGTTATCGGAACCCAGACAAAGCAC GAGCAGCATCAGACGTGACTCGATTCTTTGGAGCGTTTTCTATTCTTCTT GGAATTGTTCTTTACGCTCTAATTGTTGTAATTCGATTACGTTTATCTTA CGAAAATGGTGAAAAGTTCCTTTGAAAGAGATTATTAACTGAAGAAGCAT TTTAGCTTTAAGGAGAAGCTGTGAACTGGTGAAATATTCAATGCTGTTAA CAGCAATTCATGAAATGACTTCCCAGCTGggacacaacgttgttttaacg ttcaaataactttatttggacgttattaatgtcacatggacgttgctttg acgttgtgtgccgtctgggttAGTAGTAGGTCTAATAACAATCTGATTGA CctgacaaaataatttttgtgaGAGCTATCAGATTCATCACAAAACGAGC TCAGGNCGACCTGACAAAATAACTTTTGTGAGAGCTATCAGATTCATCAC GAAACGAGCTCAGGGACTGGGTATGAATTTGTTTTAATGCTAAGAGATTA TCGAATCATTGGTCCCCAaaaagaagaacatcaaaaaggACATCAATATG ACCTCCATAACGTTGTCAGTCAACTGGGAAAGGATTTAGATACAAAGGAC AAGGGGTATGGAAGCTCGAAGAAATCTAAGATTCTTAATaacgaaaattt tctttgttgtaAATGAAATGGTGAAAATTAGAGAGGAATCATACGGATGA GAAATGTAAACGGATACGGATGTAAACGTTAATCGTTTTTTGCTATTTCA GATAATTTATACAGTGTTGGAAATGTGCTTAACGGTAAACACACGTTATT AACATTACCGTTGAGAATTGTTTGctggtcatcaaaatacataatcttat aatattttaaatcatttaccttatcggccaactTAAGTCAGCCCTacgtt tatgtttcttttctttaaagttgatgcaaagtagtacaatgtgtacttag ctcgaggctaatcaatatcaactttTAATTACAAATCTATCTAAAAGGTT GATACTCAAGATCAActattatttacaaattaatttaaattcaatcaatG AAACCAACGCCATGGATAAAAGTACGACAGTTTCGGCAAGGACAAGTAGT GGGCCCCCATTGCTTGATTTCTTATTTAAATTCATCTAggcttttaagtt ttttaaagttatCGGGAAGGGTAGCCCAGATTTTAGGTCCCAGGAAAGCT AAATACGATTTCCATTCATTTCACTTTCAACTACTCTACTACGAAAGGAA TTCCTTTTTCTCGTTTTGATCTTACATtggtttttgagaaatattttact ttctgattcattgagttttgatttaaatagctCTG

Coding sequence (CDS) from alignment at scaffold_309:359421..366655+

>TCONS_00058228 ID=TCONS_00058228|Name=TCONS_00058228|organism=Clytia hemisphaerica|type=CDS|length=2724bp|location=Sequence derived from alignment at scaffold_309:359421..366655+ (Clytia hemisphaerica)
ATGACAATTGATGTAAAGGATATTCAAATCATTAATAAAGCTATTCCACC
ATCGACGCCAGGATGTCAACCCTATCACGCAACACCGCATTTCCATGGCA
GCTCTAAATCTTTAAACATGATCGTAGGGTACAAAACCACACCTCAGTAC
CCACTACACGCTATTGATACTCTAAGCCAAAGAGACGTACACAATCTAGT
TTCATATACCGGCGAATTAAATTATAACACAGCGGGAACTCCACATGGCA
GTAATAAAGATATTCGAAGTCTTTATTCAACAGAAGATCACCATAATGTC
AATAAAATGTATTTACCAAGTCGCCAGAATTCGATCATCTGTGCGCAGAA
TCCAAGATTTTCAACATACGGATATCCACATACGGTTGTATTGAGTCAAG
GTTCATCAGAACTGGAGAAACACCAAGCAGCAGACATACCAAATTATGGA
AAACTTGCCTGGTTTGCTTGCATATTCTTTTTTCCTCTTGGTTTGATTGC
ACTGAAGAAACATTACGAGACACGAAAGTTTCGTTATCGGAACCCAGACA
AAGCACGAGCAGCATCAGACGTGACTCGATTCTTTGGAGCGTTTTCTATT
CTTCTTGGAATTGTTCTTTACGCTCTAATTGTTGTAATTCGATTACGTTT
ATCTTACGAAAATGGTGAAAAGTTCCTTTGAATGACAATTGATGTAAAGG
ATATTCAAATCATTAATAAAGCTATTCCACCATCGACGCCAGGATGTCAA
CCCTATCACGCAACACCGCATTTCCATGGCAGCTCTAAATCTTTAAACAT
GATCGTAGGGTACAAAACCACACCTCAGTACCCACTACACGCTATTGATA
CTCTAAGCCAAAGAGACGTACACAATCTAGTTTCATATACCGGCGAATTA
AATTATAACACAGCGGGAACTCCACATGGCAGTAATAAAGATATTCGAAG
TCTTTATTCAACAGAAGATCACCATAATGTCAATAAAATGTATTTACCAA
GTCGCCAGAATTCGATCATCTGTGCGCAGAATCCAAGATTTTCAACATAC
GGATATCCACATACGGTTGTATTGAGTCAAGGTTCATCAGAACTGGAGAA
ACACCAAGCAGCAGACATACCAAATTATGGAAAACTTGCCTGGTTTGCTT
GCATATTCTTTTTTCCTCTTGGTTTGATTGCACTGAAGAAACATTACGAG
ACACGAAAGTTTCGTTATCGGAACCCAGACAAAGCACGAGCAGCATCAGA
CGTGACTCGATTCTTTGGAGCGTTTTCTATTCTTCTTGGAATTGTTCTTT
ACGCTCTAATTGTTGTAATTCGATTACGTTTATCTTACGAAAATGGTGAA
AAGTTCCTTTGAATGACAATTGATGTAAAGGATATTCAAATCATTAATAA
AGCTATTCCACCATCGACGCCAGGATGTCAACCCTATCACGCAACACCGC
ATTTCCATGGCAGCTCTAAATCTTTAAACATGATCGTAGGGTACAAAACC
ACACCTCAGTACCCACTACACGCTATTGATACTCTAAGCCAAAGAGACGT
ACACAATCTAGTTTCATATACCGGCGAATTAAATTATAACACAGCGGGAA
CTCCACATGGCAGTAATAAAGATATTCGAAGTCTTTATTCAACAGAAGAT
CACCATAATGTCAATAAAATGTATTTACCAAGTCGCCAGAATTCGATCAT
CTGTGCGCAGAATCCAAGATTTTCAACATACGGATATCCACATACGGTTG
TATTGAGTCAAGGTTCATCAGAACTGGAGAAACACCAAGCAGCAGACATA
CCAAATTATGGAAAACTTGCCTGGTTTGCTTGCATATTCTTTTTTCCTCT
TGGTTTGATTGCACTGAAGAAACATTACGAGACACGAAAGTTTCGTTATC
GGAACCCAGACAAAGCACGAGCAGCATCAGACGTGACTCGATTCTTTGGA
GCGTTTTCTATTCTTCTTGGAATTGTTCTTTACGCTCTAATTGTTGTAAT
TCGATTACGTTTATCTTACGAAAATGGTGAAAAGTTCCTTTGAATGACAA
TTGATGTAAAGGATATTCAAATCATTAATAAAGCTATTCCACCATCGACG
CCAGGATGTCAACCCTATCACGCAACACCGCATTTCCATGGCAGCTCTAA
ATCTTTAAACATGATCGTAGGGTACAAAACCACACCTCAGTACCCACTAC
ACGCTATTGATACTCTAAGCCAAAGAGACGTACACAATCTAGTTTCATAT
ACCGGCGAATTAAATTATAACACAGCGGGAACTCCACATGGCAGTAATAA
AGATATTCGAAGTCTTTATTCAACAGAAGATCACCATAATGTCAATAAAA
TGTATTTACCAAGTCGCCAGAATTCGATCATCTGTGCGCAGAATCCAAGA
TTTTCAACATACGGATATCCACATACGGTTGTATTGAGTCAAGGTTCATC
AGAACTGGAGAAACACCAAGCAGCAGACATACCAAATTATGGAAAACTTG
CCTGGTTTGCTTGCATATTCTTTTTTCCTCTTGGTTTGATTGCACTGAAG
AAACATTACGAGACACGAAAGTTTCGTTATCGGAACCCAGACAAAGCACG
AGCAGCATCAGACGTGACTCGATTCTTTGGAGCGTTTTCTATTCTTCTTG
GAATTGTTCTTTACGCTCTAATTGTTGTAATTCGATTACGTTTATCTTAC
GAAAATGGTGAAAAGTTCCTTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036693XLOC_036693Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058228-exon-scaffold_309-1491911889:359421..359581TCONS_00058228-exon-scaffold_309-1491911889:359421..359581Clytia hemisphaericaexon
TCONS_00058228-exon-scaffold_309-1510915933:359421..359581TCONS_00058228-exon-scaffold_309-1510915933:359421..359581Clytia hemisphaericaexon
TCONS_00058228-exon-scaffold_309-1575043694:359421..359581TCONS_00058228-exon-scaffold_309-1575043694:359421..359581Clytia hemisphaericaexon
TCONS_00058228-exon-scaffold_309-1491911889:363506..363840TCONS_00058228-exon-scaffold_309-1491911889:363506..363840Clytia hemisphaericaexon
TCONS_00058228-exon-scaffold_309-1510915933:363506..363840TCONS_00058228-exon-scaffold_309-1510915933:363506..363840Clytia hemisphaericaexon
TCONS_00058228-exon-scaffold_309-1575043694:363506..363840TCONS_00058228-exon-scaffold_309-1575043694:363506..363840Clytia hemisphaericaexon
TCONS_00058228-exon-scaffold_309-1491911889:364798..364941TCONS_00058228-exon-scaffold_309-1491911889:364798..364941Clytia hemisphaericaexon
TCONS_00058228-exon-scaffold_309-1510915933:364798..364941TCONS_00058228-exon-scaffold_309-1510915933:364798..364941Clytia hemisphaericaexon
TCONS_00058228-exon-scaffold_309-1575043694:364798..364941TCONS_00058228-exon-scaffold_309-1575043694:364798..364941Clytia hemisphaericaexon
TCONS_00058228-exon-scaffold_309-1491911889:365284..366655TCONS_00058228-exon-scaffold_309-1491911889:365284..366655Clytia hemisphaericaexon
TCONS_00058228-exon-scaffold_309-1510915933:365284..366655TCONS_00058228-exon-scaffold_309-1510915933:365284..366655Clytia hemisphaericaexon
TCONS_00058228-exon-scaffold_309-1575043694:365284..366655TCONS_00058228-exon-scaffold_309-1575043694:365284..366655Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058228-proteinTCONS_00058228-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_309supercontigscaffold_309:359421..366655 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 1.21871 1.17638 0.392645 0.367589 0.371917 1.19127 0.638788 0.76573 6.05473 4.89224 5.3243 9.06514 4.09283 6.12291 3.29267 3.59641 4.71661 3.87742 1.57221 2.33461 1.77703 1.75585 0 0.148974 2.7118 2.85339
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00058228 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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