TCONS_00058243 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00058243
Unique Name	TCONS_00058243
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2688

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_309:493539..506220+

transcript sequence

>TCONS_00058243 ID=TCONS_00058243|Name=TCONS_00058243|organism=Clytia hemisphaerica|type=transcript|length=2688bp
AAAGGAGGTAAATTATGGATCGAATGGAGTTCACTAGAAGTCGTATACCA
GTCCAAACGCTAAGCAAACGAATCGACGGTCGACTCTCCAATGGTGCGTC
TGCATCGAATACTAAACGGAATTCCGGTATCTTTCCGGACTACGACATGC
AAGATGGTAGACTAAGCCACGAAACTGAAGAGGATAGAATGGATTACGAA
GAAATGAAACGTCTACGAGAGAAGGTTCAAAGGCTAGCGGAGGAGAAACG
TTTACTAGAAAGCTCTCTAACAGAAGTTGTCCAAGAAAAGACGGTGGTCC
ATGCTGAACATCAAAGTACCGTTAATAAAATGTCCGTTCTCGAAAATGAA
GTTCTGACGCTGAAACAACAGGTTGGAATTTATCAAGAAGATTtaacaaa
aacgaaaaagaagaacaatAAACTGAAAGATAAACTTGAAGAAGTCTCCG
TATTACAGGCACACAACCAGACGCCTCCAACCAACACCTCCTTATTCAGT
GAGCTAGAGATGTCAATGTCAGAAGCAGATATGAATCTTCATCACCAGAA
CAACGTTAGCACGCCTTTAAAACATCAAATGTCAGATGATGAAGATGTTC
CAGATATTTTTGTTACCACGCCTAACAACCGTGATTTAAATAGGATCTCA
TCAGAGTTACGTGAAGTTTACCTGAAGCTGATCTCATTGAAACATAAACT
AAAAGACGAGGATGATTCCGCGCGGACGGATAATGGCGaagattatgacg
tcatcactgcTGACATGGTATCGAGGCTGGTAGATCAAATCATTCATTTG
ATTCAAGAACGAATTTTGTCACTTGGGATTATTGACCCACGAACTGAAAG
TCCAAGGCTTGGTTCGGAGAATGGGGACGAGACATGTTCGTTACCAGACT
CCAGACATTCTGATACTGAAGTTGAACTCTTAGAACAACAATTAGTGGAG
TTAAACCAACTTTTGAACGAGAAGAATACCGAATGTGAAGACAAGAAAAA
AGAATTACATGCTCTTCAAGCCACTGTTGTTGTTCAGGAAGAAAAAGCTG
ACATCTTGGAAGTTAAGGCCAACAAACAAGAGAGAGAAATCGAAGCATTG
CGTTCAGAAAGAGATTTGTTGTTATCTGATAAAACGATGGAAGAAAAGTT
GAAACAAGTTCTTGAGGAGAGAGATGAAGCTATCAAAAGAGCGAACGATC
TTCAAGCCCACGAAGAACAGCACACAAGTGACATGAAGAAACTGAACAAT
CAACTTATTTCAGCTGTACAACAAAAATTAGAACTTTCTGAGCAGCTAGA
AGAATGGCAGTTTGACATGGCTTCACTGATCGATCAACAATTGACGTCAC
AAATCAAGAACGAACAAAAACGTTCGAGAAAGCGAACAAACAGTGGTAGT
CAACAGCAAcagcagcaacaacaacaaaaagtcaAGTCTTACTTAACCAG
ATTCTTTTCAAGGAAAAATAGTAATGCAAATAGCAAGGAACCGAGTCGAA
CCAATACACCGAACCTTCAGTCCCCTGTTCCACCAAAATAAAAGCTTGAG
CTGGATGTTATGATGGAGAATGACTGCTACCGTTTTAAAGAAGTTTGGTT
CTTGTTCTATGGTGACAGATCACACGGGAGAGAAAAATCGCTCGCTTGTC
GATAAAACTGTATCGACGGATAATGCTTCGAGCAAAATAGATGGTATGTT
GGTTGGAATATCCATTCGTTGAGGATTCCGTTCTGCAGGCGGATAAAGGC
TTTTCTCTAAACCTATACAGAACCGAAAGAATATGGTATTTTTGGCAAAT
AAAAAGGATTTTCTCATGATGAAAACAATCATGTAAGGACGTAACAAAGA
CAACCAGGGTTGGTAAAAATCACACGTCATTGCTTGTTGACATCTTTTTA
ACGTCTTGTTGACATCCCTTGACGTTTGGATATTGTTACCTTCAAATAGC
ACCATTAAATTATAAAGggaaagtgaaaattttgaaagatgacATTTTTA
AAATGACATTGAATATCTTTTGCCTGAAAAGTCAGATCAGTGAAAAGCGA
AAACAAAAATGACAATGGAAAAGACATTGAGAAGGAGCTAGATGCCCGct
tgaaaagtttaaaaatgtataaagttttaattttttgaatattcaTCAGT
TCTATTAAAATTATGTCGCCGGTGAACCTTAATCTAGGTACCCAAACTCG
AACTCAGTCTTATAGCtcgctttttgataattctggATAGCACTCACGAA
AGTTTGCAAAGTGGTGCAAtgggctctgggtacgagattgtcAGGGTAGC
TTACCTGATAAAGGAGGGGTGATACCCCATTTGTAATAAAAAAGTTAGAA
TTCCAACAATCAAAGACTGTTTGATTTTCTCTGAAATTTTGATTCTACAC
ACACATATACTGTATATTGTTTGACCAGATTAAATTTTGACTTGAGTTTT
AACGCTTTTAAGTTCGTTGCGTTCCTTCATTCCCCAACTATCAAGAATAA
TGTTTGAGTCATCAAATTTGCTAGGAAAATTGTTTTAGGCTACATACatt
ttttattggaaaaattatttggttttttgtaaatatgaaatacgaaaaaa
ttgtatttattgaattttattgcttttttgtCACCCTCATTacattattt
cttattttttgtataagaaaatcTGATATTTATTAACT

Run BLAST on NCBI

transcript from alignment at scaffold_309:493539..506220+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00058243 ID=TCONS_00058243|Name=TCONS_00058243|organism=Clytia hemisphaerica|type=transcript|length=12682bp|location=Sequence derived from alignment at scaffold_309:493539..506220+ (Clytia hemisphaerica)
AAAGGAGGTAAATTATGGATCGAATGGAGTTCACTAGAAGTCGTATACCA
GGTGATGACCTTTGTTTACGTGACCGAAAGAGAAACGAATCGATATAGTT
TGGTTTTGGGAGAGAATGGCTGCACTGACATCATTAAAATATTGTTTCTG
TCTATTTATTTGCTTTTCCTTCTTCTATCTCTGTGTGTTTTCCTTTACTG
CccatctgtctgtctgtctgtctttctttttattgattcttgATATCCCA
AGAGAATCATCTACTTAATTATCGATTACTGCTGATTGCACCAGCAGCTT
CTTGTTTTCCCTTCGACGTCTTTTCAATGTCTGTCCTACGTTCGTGACGT
TCAAAACGTTTATACAACATTAAATGGACGTTTATACAACATTGTATGCC
GTTTGGGACATCACTCTGGTTTGTTTACTTTGATTTCTCCAGCCATCTCT
CCCAAAACCACCCTTTCGTTTCTCACGCCCTTATGCCTCGATTATTATTC
ATCAATTCAGGTTAAAGCCTATAACGCGGAACTGGCTAATCAAGTCCAAA
CGCTAAGCAAACGAATCGACGGTCGACTCTCCAATGGTGCGTCTGCATCG
AATACTAAACGGAATTCCGGTATCTTTCCGGACTACGACATGCAAGATGG
TAGACTAAGCCACGAAACTGAAGAGGATAGAATGGATTACGAAGAAATGA
AACGTCTACGAGAGAAGGTATCTAAATATGATTTTTCGTGAAATATTGAT
ATACAACAATAGTTGaattatattgagaattttgtgtattttaaacgttt
ttcaaaattttgagttgGGGTGAGAATCGCCATTTTAGTATACTTCAAAT
TTATAGTACTGGTATTTGGACCTGGCATTTGGACCTTGAGAATGTAGTct
cgcggtcaggcgcgtgccactttattattcaatTATTCCTCTAAActtga
ttcaatttttttaatacctttttctattgtctataggtgctaAAAAAAAT
GAACGGGATGGTTTTAAGGACAAAAAATTACCCGtgtggcaattggcggc
tacggtcgaaaagttgTATAGGCCTAATTTTTCatccttttcttcatttt
atagGTTCAAAGGCTAGCGGAGGAGAAACGTTTACTAGAAAGCTCTCTAA
CAGAAGTTGTCCAAGAAAAGACGGTGGTCCATGCTGAACATCAAAGTACC
GTTAATAAAATGTCCGTTCTCGAAAATGAAGTTCTGACGCTGAAACAACA
GGCTAGTACAGCTatcttctttttaataatttgagAGCTGGGGAGAAGTG
TCGCTGTCTTAATGGTGTAACATGATTGCCTCCATGGTGTAGCGTAATTG
AAACAAGGTGTTAGACTCCTTAAACCCCAGACGGCTCCACCGACAGCAAC
CAATTGAACAAATGCCTTTACGCTTTAGAATGGTTTTCGTACAGCGTGCA
AAATATTTTCGCAAAACTCAGTTCTCCTTTTAACTTTCGAGTAAAACATA
CAGTTGACGccctctaattcgacgttctactattcgataggcttccttat
tcgatgaaatttgaagttcccgtcaacaagaaacaagaaaaaacgacgct
cccttattcgataaactctcttattcgatgaatATCCAatttcccttgaa
gatcgaattatagagcgtcaactgtatttactTCATCATCCATGTTCAGG
TTGGAATTTATCAAGAAGATTtaacaaaaacgaaaaagaagaacaatAAA
CTGAAAGATAAACTTGAAGAAGTCTCCGTATTACAGGTAAGCCTATCCTT
AGgattttttcaattaaaagataGAGTCATCAAGATCGAATACGGCTTGA
GAAAATCTATAAGAACACGAGCCCTTGATGGGCAAAATACTCAGAACAAG
TTAAGtacattctaaggctttttggactctaaaacatccaatCTTTAGAA
AATTGCACAAATATAATGATATAATGGTGGAATtaagtcaaaaagttaag
aacattcacgaaggcttcaacaattttgaatgttcttataaaaaacatgt
atcttcCAATATCTGTTAAAATCTTTCGTGGGATGCAACCCGCACGTGGT
TGATCAAAAATTGAGAGGGGCCTTGTTACTAATTATATCACCATGGTAAT
TTGGCAGCCATTTTGATTAAAGATTTGGCACGGAGGAAATTTTGTAATAA
CTTCCTTAGAGATACTGTGGTGATTAATCTTCAGAAACTCGTAAACAATG
GAGGAATTCGTCAATCTATCGTAATTTGAAAGAAGTTATGATAAAGTAGT
CATATAAAATCAAGTTTTTATTGGGTTCAGAACTTAACAAGTTTTCTTGA
CAAATCTTGGCCCTGAGACCAAAAATCCTTGAGAAGGTGGATATGCacgt
ttttaataagaacaaactatataagaacataaggcttcgaaataagaaca
tgttaagaacatttttaggcttgaagcCCAAAAAGTTGAACATCCTAAGG
ctaaaaaaatttggatgttcttataaaaaaaacctatatttgataaaaat
ttgaaaccaaTAAAGTTGTTATCGGGTTCAGAACTCAACAAGTTTTCTTG
GCAGACCGAAGCTATATTATTTTTGGTCGACCCGAACTGGGGACGCAGCT
GAAATTCTCAAAATGTTAGCCCAAGATTGCGGTTGCCCATAAGAAATTTA
GTATGTGTGGCTTTGTAAAACGAAAGCCATATCACTTTTTAATAATTCTT
TGATTTTGTCACCTGATAAAACTCATTTTCTCACGTTATTCTATGACAAC
AATATTTTCCATTTATAGAGATTAAGTCATAAATCATTTCAGCGCATCTC
TATACTTTATATAGTTCATAAAACTTTCAAGTTATCATTTAAGTCTATGA
AAACTTGAACCTTGGCGATTTTAAGTGATGTAATCTACTTGATTTAACGA
GAATCTTTAGGCAATTTTATGGGACGCCCTCCTCTCGATTAAAATTGAGC
TTTTAGAGGGTATTAAAAAACATGAAGGAATTTACATGACATTAATCAAC
TGCGTGTTTAAATGTTAAGCTACCATGTTTGTATTGTTTATTAATTAGCC
TGCAATTTTGTTTTGACATGACCACTCTGTTGTTAAGCACTAAATAGAAT
GTTATTAATTTTTTGATGGTAttttaattctcttttttttcctctCTGAT
GTGTCTGATGTGATGTTATCGGgatgttatattatgctgagaCGGAGAAA
TGTTTTGAgaaatgtcgactttgctttTGACTTATTATGCGTTTTAGATG
ATATTGCTTCAACCTTTACAAAATTatgtatttttagttttttatgttaa
aggttttgttaaaaaaaaagagtgatatcgtttgcttactcttcaatttt
aattcacaagcttaaatttctcaattggattgacacagatgtggggCAAG
AAAGAAAGAGGAAAGAGGaataaacaacattttttgcttatatcagcata
atattgTACTGTTTATAATTTCTTAATAATGTCACTTGTATTTTTTctca
ttcttttttttgttgtttatttatcGTCAAAGTTGCAAATAATCGAATat
cataataaataataaagaaaacaaaaacacaaaGCCAAAATGCGAATGCC
AACAGAGGAGGTATTGTTTGTGATATGTATCTTGTGGAGGTGTTAATAGT
GTTAAtaccagggtggtctggaaaatgaaaattcaaggGGGTTCGGTTTT
TCGAGTGTGAAAATGGTCAGTAAAAtaaggttgaaaatccagggtgttCA
GTAAAACGAGGTTAAAAATCCAGAATTCCAATAAATTAGAAGAAAATTCC
AGGGGGGCTCtactttccgaaaaaaacttcctcaacaacaaaaataattt
tgaaatagtcttttaaaggttttgtctaggaatctacacattttttaaga
acattcaaaaactttaaaacctccaggtgttcttaacttttcaagtttga
aaccttaaaatgttctgaaattTTAATATCACCATTTTCTtagtgcacgt
ttttttatgagaacacaGTCCAATTTCCTAACAAATAGGGTGTTTTAGaa
tctttaaaatgttcttaacttgctcttaatattttagccatcgaagcctt
atgtttttagatagcttgttctcataaaaaaaacttttaccttGCACCTG
ACTCTCTCCTTCTACCACTCTCCAAGAAGTGAAATAAATAATCATTTAAA
AGTGAATCCAAAAGTAATACTTAACTTTTCTTTCATCTGCAGGCACACAA
CCAGACGCCTCCAACCAACACCTCCTTATTCAGTGAGCTAGAGATGTCAA
TGTCAGAAGCAGATATGAATCTTCATCACCAGAACAACGTTAGCACGCCT
TTAAAACATCAAATGTCAGATGATGAAGATGTTCCAGATATTTTTGTTAC
CACGCCTAACAACCGTGATTTAAATAGGGTAAGTACCTCACCAAAAgccg
ggatttttcattcccTACTGCCAAGGTCTTCGAAAGAAACCCAAAAACCT
GGcctccaaacattcgaaaaagtggAATCTGGTGAAATAGACATTACATA
CAACGTAGAAAAAAGCTGTGACGACTAGTAAAGGCTAGGGTAAGTTGAGA
TTTTCAGCGGTGCGCAACCTGGGCAGATTTTATTACGGAACCATGGCTGG
AGTTAATACTTGTCATGCGCGGTGTATCATGATCCGCTACGTCGTCGCAA
CATACACcaaacgttatatggacgttgtatTGTTGTTTAGTGTGTAAGCT
GGGATTTGGAACTAGTGTATAGCATAGCCCTTTAACTTTTAACTACATGT
AAAGGAGACTCAGACCAGCTTATTCGTAGGTAAAAAAAACCTCCCTGACC
TCTTCAGCTTGGCCCCCGCTTGGCCTTTTTTTTAATACTTCGatagtctg
aatcacagacccCTACATAAACCACATGTAATCTATAAGGAGGACGAATC
CGTTAGTGAATGCTAGCAGCCTTAAACTTTGACGAATTTTCCTTTAAACG
GCATAACGTAAAGTATCAGCTCTTAGCAAACAAACTATAGCCTAAAAAAA
CCTAGTCCAGGTCTAGAGTCGATGACTGTTATTCCTGTTTCCCTGATTTC
GCTGGTTAAGAATCCTGTCAGTTTCAAATAAAACAGATTTTCAATTAACC
ATGATCAacccaaattgaaattttttggtgtcTCCTAAAGACGTcttact
ttttttagttttctcacTCATTTTCACTTCTGTTATCCAACAGATCTCAT
CAGAGTTACGTGAAGTTTACCTGAAGCTGATCTCATTGAAACATAAACTA
AAAGACGAGGATGATTCCGCGCGGACGGATAATGGCGaagattatgacgt
catcactgcTGACATGGTATCGAGGCTGGTAGATCAAATCATTCATTTGA
TTCAAGAACGAATTTTGTCACTTGGGATTATTGACCCACGAACTGAAAGT
CCAAGGGTAGGTTTATTGGTGTAAAATTCATTTTCTGAAAGCTCAGATTC
AGGAATAAACTAACTCTACTACTACACTGGAATCGTTTATAATTCATGTA
ATACAGTGTTATTGTTGTTATATAATAATACAATAATCGTAACGagataa
tatcagtttttatACTATAATTTGTTCTTTACATAGTTTTTGCTTATTTC
CTACTACGACCAAATTAATTGTCTAGCATGTTAGGACTACCCGACTACCA
AAAAATCAATATAATTGCGAGAATAATTAaaacgaaaatgtttgaaattt
tctggtaTTCATTTTTTTATCTATGAGTCATAGTCTGTGTATGAGCTATT
AAATAAATTGACTGAATATGCTTGTTTCCGACGGATTTCGAGGAAATTAC
ATATTAATCCTCAGCCTTCCGATTGACACAAATTATCTTcgcttgaaatc
aaaatttcctaaattcTCCACATACTTTGTCAGAGTGTGATCTTTTTCTT
CCCATTTGATGACTTTATAATACAAATTTTATTTAAAGCAATTGACACAT
ATATCAGCTCATAGTATTCTAGGAAATCTAAACCGGCCTTAGTATGTTCC
TTATAAGTTAATATCTTTCTTTTCcctttgaaaacatgatttacaGCCTC
TTAAATTCNaataatatctttcttttctctttgaaaacatgattttacAG
CCTCTTAAATTCCAATTTAATATTGTAAAAGTGTTCTAAACTGTCATAAA
AAATTGGTTTCGCGAATGTAGCTATTGTTGCAGATtgttgggctattcca
gaaaaaaaatgtacTCCTTATGTTGAAGAGGTCTTTAGTGGGAAAGGTGA
CCTCCTggaatttttttcccaattttttaaGACCCccttttggaccaccc
tggattttcgacctcgttttGTTCACGATTCATgattttcaacctcattt
tacctaccaccctggattttctaCCTAATTTTCATttaccaccctggatt
tttacactcgaaaaaccaggcccccttggatttttaatttttcagaccaT
CCTGGACgacacacctcctcaacataaggGTGCAAACtaactatttctgg
aatagctgAAATAGCCCACCATAACTTTGGTactatttataacaaaaatc
tTTCATAAACCCATTGTTTTAATGACTgaaatgttttgttcttttccAGC
TTGGTTCGGAGAATGGGGACGAGACATGTTCGTTACCAGACTCCAGACAT
TCTGATACTGAAGTTGAACTCTTAGAACAACAAGTAAGATAACTTATATC
TACCATAGCCCGCCCAGTTTAATCTGGATAATGTTTTTTCACAAGAATCA
ATTCCAAGATCCTTGTCAAAACTTCGTTTCCTTGTACCAGATAGTCGTAG
ACAAGTTCCTGATCGCTAGACTAGATCCGGATTTCTCTTTTTACTATTTG
TGGGGATTTGAAACTGCTTTTCATAGTATTCATTCAGATTTTAATATTCA
TATTTACCATCACACAAACGCCAAACTTCGAAAATTATGGCGcgtgaaaa
aaaacattcaatcgTCATTCCAAAAACAGAATAAATCtcaaggtttcact
ttttttgcttgtgaataaggttaaagatttttttctagatTCCGGATCCC
TAGACTAGGTATAGATCTCTCTGTTAAAGCTATTCCTGGAGGgaatattg
aaaatataacTCATAAGTAAggaagtctgcgaccgcagtcggaggcgacc
cgaaggctcctctttcgatagctatctacccgaaggtaggggagggcgcc
actctttctccctggattgttcCATTTACCCTTGAactttctcttaattg
ctgagcatcaagcagagaggcatcaagtaccattttgggaatctttggta
tgacccggctgggggttgaacccaaaccttgcgcaccgtagcgggatgct
ctaccactgcactacggtcgctcaTACATCATAACTCATACATCCATTca
agttttctttcttttttcttttccttttagTTAGTGGAGTTAAACCAACT
TTTGAACGAGAAGAATACCGAATGTGAAGACAAGAAAAAAGAATTACATG
CTCTTCAAGCCACTGTTGTTGTTCAGGAAGAAAAAGCTGACATCTTGGAA
GTTAAGGTAGCTTGTTTAAATATCGTTTCTGTtttacacacccctgtctc
gtaGCCTCGGTAGAAGTTTTTCtctcagttttttttttcactcttttTCT
TGGCGTCATACAGCGACATTAGaaggggggttgtacttttacggtgtgac
gggattggccctattttagtacggtattacgggactttacgaaaaaagag
acgagaaaacggtattttaaagtCAGACATTGACGGTATTTAGCCTTACT
TTTTGTCATTATGTCAGTATTTTAATctctacaaaccggtgtgacggtgt
tattttttttaattttcgggattccgggattcagcaaaaattttgaaccT
CCTACAAACCCCCCTTTAGAAGATTTATCATAACGATATTATTTTATTTG
TCCCTTAGGCCAACAAACAAGAGAGAGAAATCGAAGCATTGCGTTCAGAA
AGAGATTTGTTGTTATCTGATAAAACGATGGAAGAAAAGTTGAAACAAGT
TCTTGAGGAGAGAGATGAAGCTATCAAAAGGTAATGGAAGAGTTAAATCG
GATTACTGAAATTCACCTGTTTCATTTCCTATCTCTcatcctatttttct
ctttcctGACTGGTGTCTGAAACAGCCTAACTAAGTTTTTAATTTATGAT
ACCTGCAACTCAtatttcgaccaatcaaattatACCCAAGGGTTCTAGGT
TTAGGAGGTGACGGgcatgtccgagccgaaaatcggaAATCGACCTTTTG
ACATTTATGAGACCCTTAAGAGacttttgccaaagattttCAACAAATCA
TGAACCATGGAGAGGGAAATTCACGATTTttgtgaccctttgagagacta
gcCTATGAATATGTATTcctttgagggacttttgaCAAAGACATACCTGT
CACTTGTTTTGCCTAAGTATATTTTAGGCTGATATTATTTGTGTctatga
aaaagtcaaaatcaaattttcagtAATCTTGGAGACAATCGTTCCTTGTA
AACCTATCTTCCTCATCATTTAAGGGCTTATGGGTGTATTTTTATTACGA
AGACTAAATTTTAATTTCCACTTCACCGATAGAGCGAACGATCTTCAAGC
CCACGAAGAACAGCACACAAGTGACATGAAGAAACTGAACAATCAACTTA
TTTCAGCTGTACAACAAAAATTAGAACTTTCTGAGCAGCTAGAAGAATGG
CAGGTATGTGTCATTTTTTATTCATCTCTAAAAACTCGGTATAGCAAATA
CCTCACACAAAAAAGTACTCTGATATCCCGAATAGTAGGTGGTCAGAATA
AACAGGGGGGTCCGAAGTTTTACTCTAAACCCTGCCCTCCTACCCCCATC
CAAAGAAATTATAGAATACGGTAACTATAAGCTACAATCAATTTATTTAG
AGCAATTCAGCTTGcgatagctgaaaatatttttaaaaataagatgGAAT
ATTATtgagcgggggggggggggggggttatttTAGACCATATAGTAATA
TATTTTTCCTTGTTACTGTGAAAGGAAAAATCGTAAACGCTAGTGTGAGC
TATATCCGGAAAAAAGGGGTATGAATAAAGCGTACACTATGTGttcacgt
ttttttctttttcttcactcgctgaaaatttttgaaaatacactGAGGTA
TTAACCTaaaattttgacactttttaaCAGTTATTTTTTGACTATGATTT
AGGGAGAATTTGTTCATGAAATAATCTTTACTTCTTCCGCCTCTACAGTT
TGACATGGCTTCACTGATCGATCAACAATTGACGTCACAAATCAAGAACG
AACAAAAACGTTCGAGAAAGAGAACAAACAGTGGTAGTCAACAGCAAcag
cagcaacaacaacaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNctcagttttttttttcactct
tttTCTTGGCGTCATACAGTGACATTAGaaggggggttgtacttttacgg
tgtgacggaaTTGGCCCtattttagtacggtattacgggactttacgaaa
aaagagacgagaaaacggtattttaaagtCAGACATTGACGGTATTTAGC
CTTACTTTTTGTCATTATGTCAGTATTTTAATctctacaaaccggtgtga
cggtgttattttttttaattttcgggattccgggattcagcaaaaatttt
gaaccTCCTACAAACCCCCCTTTAGAAGATTTATCATAACGATATTATTT
TATTTGTCCCTTAGGCCAACAAACAAGAGAGAGAAATCGAAGCATTGCGT
TCAGAAAGAGATTTGTTGTTATCTGATAAAACGATGGAAGAAAAGTTGAA
ACAAGTTCTTGAGGAGAGAGATGAAGCTATCAAAAGGTAATGGAAGAGTT
AAATCGGATTACTGAAATTCACCTGTTTCATTTCCTATCTCTcatcctat
ttttctctttcctGACTGGTGTCTGAAACAGCCTAACTAAGTTTTTAATT
TATGATACCTGCAACTCAtatttcgaccaatcaaattatACCCAAGGGTT
CTAGGTTTAGGAGGTGACGGgcatgtccgagccgaaaatcggaAATCGAC
CTTTTGACATTTATGAGACCCTTAAGAGacttttgccaaagattttCAAC
AAATCATGAACCATGGAGAGGGAAATTCACGATTTttgtgaccctttgag
agactagcCTATGAATATGTATTcctttgagggacttttgaCAAAGACAT
ACCTGTCACTTGTTTTGCCTAAGTATATTTTAGGCTGATATTATTTGTGT
ctatgaaaaagtcaaaatcaaattttcagtAATCTTGGAGACAATCGTTC
CTTGTAAACCTATCTTCCTCATCATTTAAGGGCTTATGGGTGTATTTTTA
TTACGAAGACTAAATTTTAATTTCCACTTCACCGATAGAGCGAACGATCT
TCAAGCCCACGAAGAACAGCACACAAGTGACATGAAGAAACTGAACAATC
AACTTATTTCAGCTGTACAACAAAAATTAGAACTTTCTGAGCAGCTAGAA
GAATGGCAGGTATGTGTCATTTTTTATTCATCTCTAAAAACTCGGTATAG
CAAATACCTCACACAAAAAAGTACTCTGATATCCCGAATAGTAGGTGGTC
AGAATAAACAGGGGGGTCCGAAGTTTTACTCTAAACCCTGCCCTCCTACC
CCCATCCAAAGAAATTATAGAATACGGTAACTATAAGCTACAATCAATTT
ATTTAGAGCAATTCAGCTTGcgatagctgaaaatatttttaaaaataaga
tgGAATATTATTGAGCGGGGGGGGGGAGGGCGGTTATTTTAGACCATATA
GTAATATATTTTTCCTTGTTACTGTGAAAGGAAAAATCGTAAACGCTAGT
GTGAGCTATATCTGGAAAAAAGGGGTATGAATAAAGCGTACACTATGTGt
tcacgtttttttctttttcttcactcgctgaaaatttttgaaaatacact
GAGGTATTAACCTaaaattttgacactttttaaCAGTTATTTTTTGACTA
TGATTTAGGGAGAATTTGTTCATGAAATAATCTTTACTTCTTCCGCCTCT
ACAGTTTGACATGGCTTCACTGATCGATCAACAATTGACGTCACAAATCA
AGAACGAACAAAAACGTTCGAGAAAGCGAACAAACAGTGGTAGTCAACAG
CAAcagcagcaacaacaacaaaaagtcaAGTCTTACTTAACCAGATTCTT
TTCAAGGAAAAATAGTAATGCAAATAGCAAGGAACCGAGTCGAACCAATA
CACCGAACCTTCAGTCCCCTGTTCCACCAAAATAAAAGCTTGAGCTGGAT
GTTATGATGGAGAATGACTGCTACCGTTTTAAAGAAGTTTGGTTCTTGTT
CTATGGTGACAGATCACACGGGAGAGAAAAATCGCTCGCTTGTCGATAAA
ACTGTATCGACGGATAATGCTTCGAGCAAAATAGATGGTATGTTGGTTGG
AATATCCATTCGTTGAGGATTCCGTTCTGCAGGCGGATAAAGGCTTTTCT
CTAAACCTATACAGAACCGAAAGAATATGGTATTTTTGGCAAATAAAAAG
GATTTTCTCATGATGAAAACAATCATGTAAGGACGTAACAAAGACAACCA
GGGTTGGTAAAAATCACACGTCATTGCTTGTTGACATCTTTTTAACGTCT
TGTTGACATCCCTTGACGTTTGGATATTGTTACCTTCAAATAGCACCATT
AAATTATAAAGggaaagtgaaaattttgaaagatgacATTTTTAAAATGA
CATTGAATATCTTTTGCCTGAAAAGTCAGATCAGTGAAAAGCGAAAACAA
AAATGACAATGGAAAAGACATTGAGAAGGAGCTAGATGCCCGcttgaaaa
gtttaaaaatgtataaagttttaattttttgaatattcaTCAGTTCTATT
AAAATTATGTCGCCGGTGAACCTTAATCTAGGTACCCAAACTCGAACTCA
GTCTTATAGCtcgctttttgataattctggATAGCACTCACGAAAGTTTG
CAAAGTGGTGCAAtgggctctgggtacgagattgtcAGGGTAGCTTACCT
GATAAAGGAGGGGTGATACCCCATTTGTAATAAAAAAGTTAGAATTCCAA
CAATCAAAGACTGTTTGATTTTCTCTGAAATTTTGATTCTACACACACAT
ATACTGTATATTGTTTGACCAGATTAAATTTTGACTTGAGTTTTAACGCT
TTTAAGTTCGTTGCGTTCCTTCATTCCCCAACTATCAAGAATAATGTTTG
AGTCATCAAATTTGCTAGGAAAATTGTTTTAGGCTACATACattttttat
tggaaaaattatttggttttttgtaaatatgaaatacgaaaaaattgtat
ttattgaattttattgcttttttgtCACCCTCATTacattatttcttatt
ttttgtataagaaaatcTGATATTTATTAACT

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_036696	XLOC_036696	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_309	supercontig	scaffold_309:493539..506220 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.684232	1.11082	0	1.57526e-07	3.53867	1.59261	9.39195	13.7865	9.8072	15.2403	16.1208	0.216328	19.11	0.330701	6.40032	11.5728	7.05827	4.85185	9.80788	16.5749	8.67324	6.31355	2.94401	3.34366	8.51325	5.62031	30.0965	28.9642	0.084177	0.399778

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00058243 vs. Swiss-Prot (Human)

BLAST of TCONS_00058243 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

You are here

TCONS_00058243 (transcript) - C. hemisphaerica