TCONS_00058303 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00058303
Unique Name	TCONS_00058303
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	846

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_309:677087..694568-

transcript sequence

>TCONS_00058303 ID=TCONS_00058303|Name=TCONS_00058303|organism=Clytia hemisphaerica|type=transcript|length=846bp
GAAAAGTCAAAGTTTCATTGCATCAATTTCCTGTTAAGTTATGAGACTGG
TAAAGTTGTGGAGATTCAAAATAAGAAAGTTGCTTTTTGGTATCGTCTCA
TCCAACTCAGTGTTATCATTTATGTTATTGGTTACGCCATCATTTACGAC
AAAGGTTACCAAGAAATAGATTCTGCAATCAGTTCCACCAATACCAAAGT
CAAGGGAATCACACATGttaattttgggaatttcccttcGACCTTTTTTA
ATGGGAGGATGATTTATGATCCGCAAGATTACGTCATCAAACAAGATGGT
GACTCCTTTTTCGTCATGACTAATATGGTGATAACACCAAAACAATATCA
AGGGAAATGTCCTGAAGATCCGGAATCATATCGTACAATTTGTAAAACAG
ACAAAGATTGTCAACAAGGAACTTCCAATAAATATGGACACGGCGAACGT
TCAGGACGATGTGTACCATCAGATCGTAATTCAACAGTCAAGGTTTGTGA
GAGTTATGGTTGGTGTCCGACAGAATATGACGTCCTTCCTATGGAAAACT
ACAATAATTTCAGCAAAACGATACCACTTCTGGATGGAACGAAAGAATCG
ACAGTCCTGATCAAAAATCAAATCCATTTTCCCAAGTTCAAAGTAACAAG
GAACAATATCGTCCACCACCAAAAAAGTGGTTCATATATGAAAAGATGTC
GTTACAACTCGACTACTGATCCACTATGTCCCATATTCAAGTTGAGAGAT
ATTGTGGAAAGTTGTGGCGACGATTATACTCAAGTTGGGTTCGAGGTAAT
GTTTTTACAAAAACTGAGACATGTAGAATAGAGGAAGAGAATCTAA

Run BLAST on NCBI

transcript from alignment at scaffold_309:677087..694568-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00058303 ID=TCONS_00058303|Name=TCONS_00058303|organism=Clytia hemisphaerica|type=transcript|length=17482bp|location=Sequence derived from alignment at scaffold_309:677087..694568- (Clytia hemisphaerica)
GAAAAGTCAAAGTTTCATTGCATCAATTTCCTGTTAAGTTATGAGACTGG
TAAAGTTGTGGAGATTCAAAATAAGAAAGTTGCTTTTTGGTATCGTCTCA
TCCAACTCAGTGTTATCATTTATGTTATTGGGTAAGTGAAAGGAGAATTT
TCACATTTTTTATTTGAAATTTCTTTTGCAAGTAGCCCTGGCTTATATTG
GTACACTTTTTTTTTTATAAGAACCAGTAAATTTTTGTTGAGGCTCGGCT
GTTCTTATTTTTTTGGCACTTCGAGCCTCAAATTGTTCTTGTCCTTGTAT
TTTTGGGTTTGAACCCTAATTTCATTAATTTGGCCCTTATTTTACCTAAA
ACTCAGCAACTCCAGGCTCAGGATTGTTCTTAAATTGTTCTTATTTTTTG
GCATTTTTGAGCCTCATTGTTCTTATAAAATTGTTCTTATAAAAAAAAGA
AAAGTGTATTCCTGATATGCATCACTGGAATGTCTTCTGACATTAAATCA
TGGACCCAATAGCTGATTGGTTGTAAGTGACGTAAAACCAGTCAATACGT
CACTTTACAACCAATCATGTCACGATGGTCTTGGGTTGAAAGAATTTAAG
CTTCTAGGTGACTAAAATTAGTAAAACACTTCTGATTTCGTTAAGGAAAT
ATATGTGGAGGTCAGATCCTAAAGAACTAGACATTCCAAAAGCTTTCTAC
CTTCCCTGTCTCGGAGCTTGTCTCTCCATATTGCGACACTCAGTGGAATC
AAATCTCTGAAAAATGAGCATTTTTTAAACTTTCATTTTCATATTATCCT
CTCTTCATTTAGTTACGCCATCATTTACGACAAAGGTTACCAAGAAATAG
ATTCTGCAATCAGTTCCACCAATACCAAAGTCAAGGGAATCACACATGTT
AATTTTGGGAATTTCCCTTCGACCTTTTTTAATGGGAGGATGATTTATGA
TCCGCAAGATTACGTCATCAAACAAGTAAATCCTTTACTCCTCTGTTCTT
TTAAGTTTCTTGTTTTTTTTTATGGCCACTTCCGCGAGAATCCTTTTGTT
TCTCATATATATGTCCGACATTAAGTACTGATCTCCACTGTTAATTCATC
TAACGGTTAGGGCTTGGGGACACAAGAAGTTTTTTTTCACGTTGGTGCAG
TGTAACATGTTCCATCCCACCAACACAAGGTTTCTTTTTTTGTTTCATGG
GACAAAAAGTGAGGGAAATACCCTAAAGACACGCTAATTTTGTCCCAGGG
AAAAAAGTGAGAGAAGCACAAATGTTATTAAAAGAAAAATGGGGTGGAGA
CACGAGAAAGCGGTTCAGTTTGGTGGGATGGAGCATGTTGCATTGCACTA
ACGCGAAAATAACTTCTTGTGTCTCCGATGCCTTTAGAGGTCAATGGTTT
ATTAAATTTCTACATTTATGCTACGATTCTACTTTTTTTTGGCATGATTT
TAATCTTTTCATTCTAACTCAAGGATGGTGACTCCTTTTTCGTCATGACT
AATATGGTGATAACACCAAAACAATATCAAGGGAAATGTCCTGAAGATCC
GGAATCATATCGTACAATTTGTAAAACAGACAAAGATTGTCAACAAGGAA
CTTCCAATAAATATGGACACGGTGAGATTATAAAACTTCAAGCATCCCAT
AAAAGCTACAATCACTACAATAGTATATTGGCACCAGCCTCAAAAGACCA
CTACATTTATTCGCTTCCCCCTCCCTAAATCCCCTCCCCCTAATTTCAAT
GGTTGCAGTGGTTGTAGTTTTTTGTAACGTTATGAGTAAACTTCAGAAGA
AATTCGGCTTTTTCAACAACACGATGTCCCACTTTCCCTTGGCAGTAAAC
TCATTTTCGAACTCTTGTTTTTCCATCTCCAGGCGAACGTTCAGGACGAT
GTGTACCATCAGATCGTAATTCAACAGTCAAGGTTTGTGAGAGTTATGGT
TGGTGTCCGACAGAATATGACGTCCTTCCTATGGAAAACTACAATAATTT
CAGGTATTTGTTCATCCATAATAAAACCCATCAAAAGGGTATACTTACCA
TATAGTATATATTGGACGATGAAAAGGATCTGAGGCCGTCTATGTATATG
GTGTTGTTTTTGTATATTTCTTAAAAATCTAGTTGCTTTTATAAGTNAAG
AGGCAACAGGGCTGCAGACTAAATTGTAACATCAAAAATTAGTGTTTACT
GCCAAGTACCATTGCAGTGGTTGTAATTTTTTGTAACGTTATGAGTAAAC
TTCAGAAGAAATTCGGCTTTTTCAACAACACGATGTCCCACTTTCCCTTG
GCAGTAAACACATTTTCGAACTCTTGTTTTTCCATCTCCAGGCGAACGTT
CAGGACGATGTGTACCATCAGATCGTAATTCAACAGTCAAGGTCTGTGAG
AGTTATGGCTGGTGTCCGACAGAATATGATGTCCTTCCTATGGAAAACTA
CAATAATTTCAGGTATTTGTTCATCCATAATAAAACCCATCAAAAGGGTA
TACTTACCATATAGTATATATTGGACGATGAAAAGGATCTGAGGCCGTCT
ATGTATATGGTGTTGTTTTTGTATATTTCTTAAAAATCTAGTTGCTTTTA
TAAGTTTATTGTTTGTCGATGATGTTAGTTGATGTTGTGTTGCTTCCAAG
GATAAACTAATATGGTAATGGTACAATTATCTCAACTGGAGTGTTATTCG
AACACATACATACACGTTTTTTACGAGAACATCCAAAATTTTGGCCTAGC
CTTGAGATGTTCTTAACTTTTTTAGTTTAAAGCCTAAAAATTTTCTTAAC
ATGTTGCTACNCGAAGCCTTGAGATGTTCTTAACTTTTTAGTTTAAAGCC
TAAATACTTTCTTAACATGTTCCTACTTTCGCCGTTTTTTGAGTGTTTTT
GTCCAACTTCTTAAAAAAACGAATGTTTTTGAGTCCGCAAAGTCTTATAA
ACTTGTTCTTAATATTTGGCCCATCGAAGCCTTATGCTCTTATATAGTTT
GTTCTCATAAAAAGTGTGTGTTCAAATTAGACCTTGATTTAAATCTGATT
CTGTTAAAGTTGTGCATTTGCATCTAACGTAAACAATTTGTAATCAACCA
TTTTCCCGTTTCAGCAAAACGATACCACTTCTGGATGGAACGAAAGAATC
GACAGTCCTGATCAAAAATCAAATCCATTTTCCCAAGTTCAAAGTAACAA
GGTATTTGATTGCTATAGCCCAGCTGGCACACAACGTTGTTTCAACGTTC
ATCTAACGTTATATGGACGTTGTGAACGTTAGATAGACGTCGAAAAACGT
TGTATGGCAGCTGAGAGAATGTAGGAAAGATGGTCAGTGACTGCAGAAAA
TGAAAGTGTAATCTTTCAGGTGTTTTTAAAAGTGTACAAATTTTAATCGA
GATTTTTATAAAATTTAAGCTTTGACATTGCAAAAATGAAAGGCTTAGTT
AATTTAATTTTTACACCCCCTTCTCACAGACCCGGTGAAATTTTTTTAGC
TAGTGATGGTAGAAATAACGGTCTGAAACTTGATGGGGATTAATATTCCC
ATATTATTTATTTCCGGCGGGATTTCGATTTTTTTTGTTTTCAACTCAGA
TAATTCAGTGGGGATGGGAAAAATAACATATTATTTTTCAACGAGGATTA
TTTTTTAGAGGACAATTTTCTACCGGGGACGATATTTTGGACAATTTTTC
CAGTGGGGAGGGGTCCCGGTGGGTCTGTGAAAAGGGGGTGTATTTTTGCC
ATCATACTTTTGATTTTCTTTACCCGTTCGCAAGTTATGAAATTGAAGTA
AAAGATGGAATGACTCACTTCCAAAATATGTATATCGATTCCTATGTTTC
AAGTGACCCCAGACCTTTAGCCTCTGATGTATTTTGGAGTCGATAAGTAT
GATGGGGAAAAATTGACACTTTTTTATTCGTACAGGAACAACATTGTTCA
CAACCAGAAGAAAGGTTCCTACATGAAGAGATGTCTGCATAATGAAGAGA
CCGACCCATTTTGTCCCATCTTTAAATTGAGAAACATCGTGGAAAATTGT
GGTGATAATTATACCAAAGTTGGTTTCAAGGTCAGTCATTTCTCCTTATT
TCATTTTTAGTTTGTTCATTTTTCGTTATAAAATGACCAAATGACCCGGT
TCTGGGAAGCCTATTTTTTTAGCTTTTTATTAGGTTTTTCCGTTGTTAAC
ATCAAAAGATGAAAATCGATTTGCTCAGTTTTTGATCACGTTACCAAGTA
CACCTCTTGGGATTGGTTTAACCCTATTCAAACTAGGCTTTTAGGGGCGG
TTCAGAACTAGGGGGGGGGGCTTTTCCTGTACTACCCCTTAACTTTTGAT
CTAGTGGGTCTTTTTGGATGAAATTTGGCACACAAGATCCTTGTCACGTA
AGGCAACTTTTGACAAAAAATTTTTTTTTTTGATGACGTCACTCACCATG
CACAAAGTGAGCAAAAACCGAAATTTTCCATTGTTCTTATAAATAGCTAT
TGTATTCTAACAAAGGCTTTAGAAAAAAGTTGCCTGAGTTTAAAATGCTT
ATTATTTATCCTAAATATTCAATAAATTACGGTTTAAACGATATATTTGA
CATTGAAAATAAATTTGTATTGGAAAAGTGTCAATTTTTGTGACACCTTA
CTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAAGAT
TTAATCACATGATCAAAAAGTGAGCAAAACAAACTGTTATGTGTCTGTGT
TCATGCAATAAAATCAACAGTAGCTCGGACTACACATTTATTTTTATCTT
AGGTTAAGATTGATATGTTTCAGGCCTTGTACTTAGATTCCATTAAGTCT
TTGATTGCTTGAAATTCGGCAATTCTAGGCTCTTTGTTGTTATTTGATTG
TTCTCCCATGTTCTCCTAAGTTCTCCCGTGTTCTCACAGACCCGGTACCN
ATGTTCTCCTAAGTTCTCCCATCAAGGATTTATTATACACTGGATATACA
AGTAACAGATTTTTGCCGATTTCTCGTGCACTAGCTATGTCCGCAGTAAT
GATATTATTGTTCACTCTCCTTCCTTCATTAAATGATTTTTCGAAGCATT
TTTATTGCATTTCTTATCGAAAATCACTCGTCCAATTCCCAAAAGAGACT
GAAAACTTTCCTGTGAGAGTCAGATTCTTCCACTTAATTGCTAATTATAA
GTCGTTATGACGTTTCAAGCTGTGAGAAAGATGCAAAACGTGTTGTGTAT
AAGAAATTTAATGTTGACACCGGAAATTTTCAAACTTCAATCTAAAAAAA
ACCACCTTGCCACCACGTGCCTCAAAAGGATTTTCATACCACAGTGGAGC
CAAGATACTCAAGTCTTATGTATATTAATTTCAGATCTTTTGCGGGGACG
TCTTGGAGAGATATTTCCAATTGAAAATGTCGTGTCACTATAAGCATTTT
GTCTGAATTGCTTGTCTAATGATGTTTTTCTCATATTAGATTACACAAAT
GTATCCAGCTTGGAATACTAGCCTTACTTTCAAACTTTTTTTCTGCAAAT
GTACAAAATGAAAGAGCTAGAGAACTTTATAAAAATAAGACTGATACACA
TTTTCAAAAATCAGACATCTTCGAGCCGCCATGACAGCTGTCCTTTGCGG
ACAAAGCTAGAACATCAATTGTTTTCTGAAACAATGAAAATACAATGATC
GCTCTCCATCGTTTTATGAGTCGTTTATCCAGTGTATAATAAATCTTTGC
TCCCATGTTCTCACAGACCCGGTACCCTGATTTTTTAGAAAATAACGGAC
TGAAACTCGATGGAGATTGATATTCTCATATCTTTTATGACTGGGGATTT
AAATTCCATTGTTTTCCAAGTCAGAAAATTCAGTGGGGATGGCAAAAATA
GCATAATATTTTACAGTGAGGATTGGTTTATTCGATTATTTTCAGTGGGG
ACAAAAACTGGAGTATGATTTTCCATTCGACCAATTTTTCCGATGGGAAG
GGTTCACAGTGGGTCTGTGAGAAGGAAGTGTGTAGTAGTATGATTCAATG
AAGTATAAGCCCGAACAGGTCTAGAATTGAATCTCTAAACTTTCTTAGGC
AAGAAAAAGTTAAGCCTTAAAAAATACGCCGTATTTTTGATGACGGATTG
AATCTATCGATTCCTTTATTTTCAAGTGATATATTTTTCGAAATTTAGAT
ATAAATTTTAGTTTCAATCTGTCATTTGTTTAAAAACCAGGCGGACCGCG
CTAGGCCGTGCAACTTTGGTAGGATTTGGCAGGTTTCAACTCCTACCATT
ACCAAGGAGATTCGATTCTAGTCCTTCAGGCTTATACTTCATTGGTCTGA
TTTCAAGATCTCTTTTTATGAATCAGCAGAGATATTTCACGATGGCTAAC
GATCAAGAAAATTCAATTTTCTTTCTGTAAGAATCTAGGGTCTGTTTAAT
AATGTGTCCAACAATGTTCTTACGTCTTGAAAAATGTATTTCTTTCAGGG
TGGCATTTATGGCATCATCATAAAATGGGATTGTAATTTGGATCATTCCA
TCTACGATTGCGTTCCTGAGTATAAATTTGAAAGGTGACATTTCTTTTAT
AAACTTAAAGGTTTTATTTTTACATAAGTGTTCCCGTTCATATCAGACAC
ATATTTCATATCAGGACAGTGTCTCTTAATTATACATACTGGTTGTTGAA
ATACACATTATTAGCGCTTTTTTTTTATGTCAGTTAACATTTGATAATCT
CATGGTTGATTGTGATTCGATTTACGTCTTTTTTTAATTTGTAATTTCCC
GCGAACTTGTAATTTCCCTTCTAGCTTCTGTAATTTCCCTCCTAGATTTT
GTAATTTCCCATCGTCAAATTCATTACCTTTTCCAAATTTCTTACTAACT
TCGAAGGATTAAGTAAATGGAATACTATCCAATAAAAACTCGATTCGCGT
TTCTATGACTTTTTTTGAGACCTCTTTTTAAAAGTTCAGATTGATTTTCA
GTGTTAAATTTGTGCCTTTCGGAATTGTTAGAATTTCAATCCAAACCATG
AGATTAACCAGGAATCCCATGCTTGTTTTCGTGAAATTCTGAATAAATTT
CCCTCGTTGCACTTTTCAAAAAATTTCAAAATTGACCATGAGATTACTAG
TTCAAAGTAATTATCCAACATTTTTTGAGTTGTGTTCACTTCGCGAATAA
GACCTTTCCAAATTCCCCATTGGGACTTAATTTCGCTTAAATCGGCGAAA
TCCGCGAAATTTAATCCCAACGAAAAATTTCCCATTGAAGTGAAACACAA
ACAAAACCTCAAATTTAGCTACATTCCCAGCTGGCACACGACGTTGTTTC
AACGTTCATCTAACGTTATATGGACGTTGTGAACGTTAGATAAACGTCGA
AAAAACGTTGTGTGCCAGCTGGGTTATAGTTACATTTTTCTTCATATTTT
GGTAGATTGGACGATGAGAAAACTCCCCTTTCACACGGTTACAATTTCAG
GTAATAAACATTCATCGTTTTGATATTGACCTAAATTTTCCCTAATTTTC
AATTTTTTGTGATATTTATCTACTGGTGAAAAAGTGTTAAATTTTCTCTT
TGGTTTATAGTTCCTTTTCGATTTTAGATATGTGAATTACTTTGTTGAGA
ATGGGACGAGATATCGAACATTGACGAAAGCTTATGGAATTAAATTCGAA
CTGGTCGTGTTTGGAAAGGTTTGATTCATTTCTGGAGAAAAGGGGTTTGA
GGGGGTACCCGATTCCGCAATGCCACCAAGACCCAAATACACAAAATTCC
ACCACCAAAAATCTTTTGAAATTCCGCGAAACTATTTACTAAATTCCGTT
TCTCCGCACTAAAATTACCCAATTTCCGACATTCGTTCGAAATTCTGTGC
TGTATATGAAGTACTCGAGATCATCCCTTTCACTACAGTTAAATGAGGTT
TTCTTGCATTATAAAATGAGAAAATGTCTACTTAAATTTGACTTAGACTA
ATTGTGTGATTGAGTGAAATTGTTTAATTTAAAGGTTTTTTAATTGTATA
TTAATTGGTTGATTTTTTGAACGCACTAATTCAAGCATTAAAGTAGTACC
TTACATAGGGAACTAATTTTCACTTTTTTTTTTCGCGATTTTTCGGACGT
GAAAAATCTGTGGAAATTAGAACCCGTGAATTACAAATTTGGCCATTTCT
CATAAGAAATTTCGAAAAATCCCTAGGAAAATGAAAGAAATTGTAAAACT
AGCAAAACGACGAAAATTAGTTACCGCAAAATACGGTTTTTCTGATTTTT
TTCGACCGCGAAAATTACTTCCCGTTTAAATTAGTTCCCTCAAGGTATGT
CGATTAATGGGTGCACATTAACCTCATTTTAGGCGGGGAAATTTGACATT
ATTCCATTGCTCATGAACCTTGGAGCAGGTATTGGCTTGCTTGGTATAGT
AAGTTATCTTTCATTATCTCATTCCGTGAGCAAAATTTGTTTCTGCGCAA
TCAACTTGCGCAATAAAGCTCTAATTGTCATATCTCTGAGGAGTGAGCAA
ATAATTAAGGGTTTCATTTTTATGAAAAAAGAATAAAATATTTCAGTTCT
TAGACGTTAGAAGGTTTTTTTTTGATGAGTTGTCTCTTTGGCTGCTTCAA
AAGTTGTTTGAAGAAAATGTCATTCTATACCGCTGGTACACTGATCTTTA
ACTACTTGACTGGATCGGGCTTCTCATATAAAAGGAAGCGAGTCCAGTTT
TAGAGCTGATGAGTCCGCCATCTTGTTTTCAATTCTGNCGCGTGTCCAGT
TTTAGAGCTGACTAGTCCGCCATCTTGTTTTCAATTCCGGTCGTCAACAG
CGCGATCCGAATGTTTTGAAATTCAAACGTTCGAGAATCCAACGTAAAAT
AGAAAACAACATGGCGGTCCAGTCGACTTCAAAACTGGAACACTTCCACA
GGAAATCTGTGAACAGTTACCCTAATTAGTGTGCAAAAGATTATGATATC
TGTGTCTGGTGACAATTGACGTTTGATCTAGCATCTAGTAACTATTTTTA
TTTCGTAGGCAACTATTTGGTGTGATTTTATTGTGTTGAATTTGGTGGAG
AAAAAAGAAGTGTACCGTGAACATATTTTGGAAAGTGTGGAAGAGCAAGC
TTTGAGACGAGAAACTTTGAGACGAGCAAGAGAACAAAGTATTCAAAATG
AATTTGCTAATAATGAATTTACTAACAATGAATTTGCTGAACTATAGCAT
CAACTATTAATTTTTGTACTACATTCTTAACCTCGTCCCCATGTATCCCA
GACTTTATTTACGTTACTTATGAACGCCAGAGAATACCCTGGTGTTGCCT
GATGCGAGTTCCCCCTCTCAGAGGGGGGAACTTCTCAAAACAATACGTCA
TAAAAAATCTGATGTTACTAAGTTACACTGCAATGCAATGGTTTAAAATC
CAGGAACAAATGAAATCTGACGTTTTGTTTTTGAATTACGTAGTCTTACG
CATTCGAAAAACAGACAATGCCAGGGTAGTGGTATCAGACCATGTTCACA
CGTTACTGTTCCGTTTCGCTCCGGTATGATTTTCGTTACGGATCGAGAAT
ATTCATATTTGTTTCGGAACGTGTCGGAGCAAGAAAACAGAGCAGTGACA
TTCCGATGAAAAAGTGGAGCGAAACCGTTTCGATCTGTTTTGCTTTGAAA
CATCTTCTTTTTTGACGTTTCGAATTTTGACGCTCACACACTTGTTTTGG
AGCTGTTTCGTTTCGGAACGGAACGGAACCGTAACGTCTGAACATGGTCT
CAGTAAGCATAAAAAAGCTGATGATACGCAGGGAACGAGGTTGCTACATT
CTAATAATTCGTTTTATGTCAAATTGTCCTTGTAATTTTCGAAGACTTTT
ATCAGGCTTGGGTGATCTTGACATATAGAAGGTTGAAAATACGGGGGAAG
TTGGGGTTTCAAAATATTGAGACCCTCGCAAACCTTTTAATAGGTTTTTT
ACAAGACACAACAAGTATTCACAGAATCGCCTTAAAATCACGAAAACTAA
ATAAAAATGATTTATGTGTGTAGGGAGGCCCCCCAGCAGACCTTCAATTC
ACGCAATCACACAAAAAATTTTCCCCAAATTCACGCATTCACGCAATGTT
TTTTGTCGCAATTCACGCAATTTTTGTTCACGCAAAGCTTCCCAACTCAT
GCATTCAGGTAATTTTTTTTTAGTTTTTACGCATTCACGCAAGTGAAAAA
GCCCATTCATGCATTCATGCAAACCGATGAGGGGGGGCTTTAGGGGGTGA
AATGGAATGGAACAGAGATAGGAAAGTTGTGAAATGGAATGGAACAGAGA
TGATCTAGGAAAATTAACGAGGGTACATTTTTTCGAGGGGATTTGCAGTA
ATTGCGGAGGGACTCGCCGCAATTAAAAAAATAACTATGAAAACGAATTT
TTCACAACAATCATCTCTTTTTTATTCCTTCTTTTTATCTTTTTTGCTAC
TGATATGTTCACGATAATTACCCATTTAATTAATTTCATCTCAATTGCTT
TTTAAAGTAGAAAACTCGCTCATACTTTGAAGCCCCGGATTTCGGAGAGT
TTTTCCTGAGGTTTTTACCCAAATTTTGATGACCTTTAGTGATTAATGGG
ACCTTTGCGGGCTCGAAAATTTTCCGTTATTATTGTTCACTTTAATGACT
TCTTTAAGGGCTCTAACCGTAGTGAATTTTCATATTTGCTATGAACAACA
CATAGGTTTCTGCCTGATGTAACCAAAAAAACTATATGGCATGTTATACA
TTTTCTGTTAGGCCAACAATCCCTGAATCTAAAAATTTCAAAATCGCAAT
GAAAAAATTTGATGAAGAAGAAAATGAAGAGTTTTGCGAAGAAAAGTATT
TCAACTTTGAGGACCTTATTTTGGCGAAGAATAAACATTTAAAAAATATT
TTTTTGCATCATTAGATGGTGTATCTTAAACTAAACTAAAACAAATTTTT
GTAAAGTTTCTTAGTCTTAAAATCTTGAATTTTTTGAATTCTCAAAAGTT
TTCGAAGTCTTAAAATCTGGAATTGGTTTGTGACCAATTTTTCATTCTAA
TTTTTGTTCGAAATTTTTAGATATTTCAATATTTTGCAGACAATTGGAAA
AAATCAAAAGAAAAAGGTGAATTACCCATTGAAAGCATATGCCGACATTG
GCAAAAAGTAACGATTTTGACTTCATTTTCTGAATAATATGAAGTATTAG
CCAAGGACTATAATTTTGATTTGAACATTGTAATTTTTCAACATATAAAA
GTTTGTAACTATTCATTTTTTTCATTTCAAACCACCTAATACAAAAATCT
TGTAAAAATAATAAATTTTCGGCAAATAGGTCGAAACAAATCCCGACAAT
GGCAAGGAAATAAAAAATGCTCATGTCGGCATATACCGACATCGGCACGG
AAAGGGTTAATTACTCTTGACAGAAATAATTACCAAAAAACTTTTAAAGG
CAGTTTTTTGTTTAAAGTGTCAAGGAACCCAAAACAAAAGTTTTATCTTC
AAATCCCTAGAAAATATTCTGACTATGGTCAAAGCACTTAATGCCTTGCC
TTTAATCAGTCGGACAAGATTCTGAAGCGATTGAAAATTTTTTTTGAAAT
ACAAAGGAATAATTGTAACTTGGCCTGTAGCTAGCCTAGAAATCTAAGCT
AGTTTTTAATTCAGTCACTAGGATAAATTTGATGGTAAGTTGTGACTGAA
TAACAGTATTCCAAGTAAATTTAAAATCTGTAAATATAAAAAATCTTTAA
AGCACCGAAAATGCTATATTACCATAAGCCGTGTGTCCTAGCCTTGTGAA
TACGGGCTTAGATAACTAGGCTAGCCTGTAGCCAAATACTTGTAAGGTTC
ATAAAATTCTTATTTCAAAATATCAGGCATTTTTAAAAGAGAGGTTCATT
GTATAGATTATTTTATTGTACCGCACGATACCCTATATTGTTTAAGAACG
TCCCTATGATTAGGGACAGATATCTGTATCTCTGCTCACTAGATCGGTTT
TTTCCGATCCAGTAGTTTGAATGAAGATCAGTAGGAAACTAGAAAAAAAG
GTCCTTTAATATAAGACGTTCCTATATGTAAGGACGGTCCTAAAATATAA
GAATGGTGTAAATCCATTTCATCATGGATATTCTTTACTTATTTTGGAAA
ATCATCCTAAAATAGTCTTACAGCATTCTTAGTTTAGGACCCTAATTCAG
ACTAGATTTAACATCTAGTACATACGTCTCATCAAGCATAAAATGGCATT
TTTTATTGTGAAAGGAGTGATCCTTACTTGGGGGTAAATGACAATTTATA
ATTGAAAATGCTCTAAAAATGGCATTCTTAGCTTGAGCAGCAAAATTCCA
TGATGATGATATTCTTAGCATATTCTTAATTTTTTGCCCATTTTCATCAT
GGACATTCTTATAAAGTGTATTCTTATTAAAAAAAGCGTGTACGGTATCG
TATCGTGCCGTACTGTTAATGATGTAAATAAATATGAAGTATACATTAAT
CAGAAAACAAAATAAAAATTCGAAATTTTCAACTTTGGTCATATTCATTT
CCATCTATGGTAAAGTTTCACATAAATATTTAAATTCTCTTTCGAGCAAT
GACTTTCAGACGAATATTGTTTTGGAAAAGAAGCATAATATTTTCATGTT
TCCGTTTTCTTTTACTTATTATTGTCTTTTATTTCCATCTTTGAAGAAAA
AATTTTTTCTAGAATGTCAGATGATCCAATTATTCATGTCACGAATATTA
TCCAGGAAATAATGTACGAAAGGAAGACATTGAGAAAATTAGTACGAAAT
TCTATATTTTCTGATGGTGGAGAAATATCGAAAATATAGAAGGCCATTGA
TAATCAATACAGACTTTTGTGGCTAGCGCAAGGAATATTTACAACACTCC
TGTTTCCATCTCCAATGTTGGCTGCTTTAATCTCACCCATCACATCTTTT
CTTTTCACTATTTTCTAACCTGAGATCAGATCGTTATTGTTTTCTGCCCA
CCACGCTGAAGCTCTAAAGGGATGTGTCAAAACATAACAATCTGACGAAT
ATGCAATCTCATTTTCTTGGGTCCGCGCTGCGCCAAGAATGGGCTGGGAA
CGACAACAAAGTAGCGAGACAAAAGTGAAATAGGGTGCCGTATCAGGAAA
ATTTAGTTTTGGTTGACTCTTGTTGTAGAATTTTCCACGGAAGGACTATT
TTCCTCATGCCAAAGTATTTAAAAAATTCACTTCAAATTCTCTTTAAATC
ACATTTTGGTATTTGGTAGGTATTACATGCATTACTTATTTAGCCCACTT
GGTCCTTTTTTAACTTTTTGCTTCATCACATGAGATTGTTGCGTCATCAA
TAAGTTCCTAATGCAATACTGACAACTTTCCTTTTTTTAATGTTTTCTAT
TGTATTTTTTCTAACAGTATTTGCAACTACAATTATTTTTGCTACAATTT
TCCGCAACCTTCTTGCCAGAATAATTATTTCAAGTACAGTTAATGATCTT
TCCGCATTATCGGTTTGCTATATAAATAAACTGATTAAATTGTCTTAGTT
AGAATGTATTTGTATCAAAATCAAAACAAGAAGAAAGAAACAAAGCGAAA
CATTGAAGATGGGATTCGAAGATTTTAAAATGCAAGATTTGAGTGCTTTA
TTGACCTATGAAACTGGTAAAGTTGTGGAAATTCAGAATAAGAAAGTTGG
CATCTGGTATCGCTCCATTCAAATTGCCATCATCATTTACGTCATTGGGT
GAGGCTTTTCTTGGGATCCAATGCAATGGAAATTATTCTAAAAATGATTT
TAAAACTTAATACTTTGAACATTATTGGATTATTTACTAGTTGCTTCCTT
CATTCCTCTTTACATGTTTTATTATAAGAACATCTAAAAATTTCGAAGCC
TTTGGATGTTCTTAACTTTTTAGTTTTAACCCTAAAATGTTCTTAACTTA
TTCTTAATATTTTGCCCATCGAAGCCTTATGTTCTTATACAGCCTTTGCA
GTTTTTATATAAAAGATATGTAGTTATTTCTTTTTATGTCAACTGAAGGG
ACCAGAAAACTTGTTCGAGTTAAGGAGATATTCGAATTATAGAGGTCAGA
ATCATGGAGACTCCACTGTATAATCTCTTCTGTTTTCTAATCAATGGTTA
ACCCCTCGTTATTTAGTTACGTCATCATTTACGACAAAGGTTACCAAGCA
ACAGATTCTGCCATCAGTTCAACCAATACCAAAGTCAAGGGAATCACACA
TGTTGATTTTGGGAATTTCCCTTCCACCCTTTTTAATGGGAGGAGAGTTT
ATGATCCTGAAGACTATGTAGTTAAACAGGTACATTCCCAGCTGGCACAC
AACGTTGTTTCAACGTTCATCTAACGTTATATGGACGTTGTGAACGTTAA
ATAAACGTTAAAACAACGTTGTGTGCTAGCTGGGTTATGATTTAGTTGAC
ACTCTCCAACAATAAACACCCCTGTCTCAAAGACCCAGTGAAACTTTTTT
CCCCAGTGAAGATAATTGAAATCCCAATGGGGGTGGATATTCTATTGTTC
TAAGGTTAAAATTTCAGTAGTATTGAAATTCCAGAGTATTTTTCCACCAG
GACGAAATTTTTCCCAAATTTTCCTGTGGGGCTGGGGTCGCAGCGGGTTT
GTGACACAGGGTGTAGTAAGGAAAAAATAGATGAAATTGAGTTAAGAAAT
ATTTTTGAATGACTCATCCATATGGCATACAGTGACCCTTTCAAAACAAG
CTGTAGGAAAGCGAAGGAATGAGGGTCAAATAACTTTCGATTTCTGATAG
GCTTTAGAATGTTGGCGTATGCTCGCAAATACATAGAACTAACTTGCTTA
GCCTTTGCTCTTACCAGAATGGTAATTCATTTTTCGTCATGACAAATATG
GTGATAACACCAAAACAATACCAAGGGAAATGTCCCGAAGATAATGAATC
GTATCAAGCACTTTGTAACACAGACAAAGATTGTCAACATGGAACTTCCA
ATAAATATGGACACGGTGAGATTGTAAAACTTCTAGCGCCCCATAAAGCC
TTATACATTTACGGTGTGACGGGATTGGCCCTATCTAAGATACGGTAATA
CGAGATTTGACAAAAAAAGAGATGGGAAACGGTATTTTAAAATCAGACGC
TGACGGTATTTAGCCTTATTTTTTGTCATTATGCCAGTATTTCAACCTCT
ACAAACCGGTGTGACAGTGTTATTATCTTTTTCAATTTTGGGGATTCAGG
GATTCAGCAAAAGTTTTGACGGGAAAGCGGTATTTCGAACCTTTACAACC
GCCCCCCATAAAAGATAGTACTTTTATGAAGATATTTGCTCAGAGTCAAC
TTGTCGCAGGTCATAAAAAACTATCTAAAGAAATTCGATTTTCCAACAAG
ACTAGGTTTTAGTTTCCCTTGGCAGGAAATATTTTCTATATCCCTCATTT
TCAAATTCAGGAGAACGTACCGGACGTTGCGTACCATCAGATCGAAATTC
ATCAATGACCGTATGTGAAATTTATGGCTGGTGTCCGACTGAAGTTGACC
AACTTCCAATGCCAAATAATAATTTCAGGTAAACAAATTCTCAGGAAAAG
CATCGAATCGTTTCACTTCCATGAAATACTAAAGTGACAAATATTTGTTG
AAGTTTAATTATACCATAGCCCTTATAAAGAACACTTGTCTTGAAGCTTT
TTGTTTCAACTTTTTGTTAGCTTTTCCTTTGTTATCATCAAAAAATGAAA
ATCGATTTGCTCAGTTTTTGATCCACGTTACCAAGTACACCTCTTGGGAT
TGGTTTAAGATTTAATCACATGATCAAAAAGCGAGCAAAACAAACTAATT
TCTCAAGGCAAGTTCAAGTAACCCCCAGACCGGGGTTTTTATACAGACAA
TGATTATACACCTATTTATACCTTTGTTTGATTTCAGCAAAACGATACCG
CTTTTGGATGGAACGAAAGATTCGACAGTCTTGATCAAAAATCAAATCCA
TTTCCCCAAATTTAAAGTTACAAGGTAAAATTATATACACCCCCTTCTCA
GAGACACGTAGGATTTTTTAAGCCAGTGGGGATAAAAATAACGGAAAACC
CTAAATCTTAAACCATAACCCTAACTGAAGCTGGATGGGGATTGATATTC
TCATATTTTTTATGGCTTGGTATTTTAAGTTAATAGAATTTAGTGGGGAT
GGGCAAATAAAAAATATTTTGCAGTGAGGATTGGTTTATTTGATTTTTCT
CAATGGAGACAAAAATTAGAGGATAGTTTTCCATCGGGGACGATATTTTG
GCGAATTTATCCAGTGGGAAAGGGTTCCCAGTTGGTCTGTGAGAAGGGGG
TGCTTATATTTAAAGATACATAACCGTTTCATGTTAAAACTTTAACGAGA
CCACTCACAATGGTTTTGTACGCCCTAAGAAAAGAGTAAAGTCAAAATGT
ACAAAATAAGAATATTTTACCACAAATGATATACAAAATACAAATTTCAT
CAAAATGAAACAACAAGTTACAATTTAATTGCACTAAACTTTGTTTGAAG
TCAGCAAAAAAGGTGAGGTGGGGGCCACCAGCAACTTTTCATTAAAGTGA
AACTTTTTTGTGTGTTTCACTTTTCAAATGCTTCTATTTGATGAAAAATG
TCTCAAGTGGCCCCAGCATCTCAATTTAAGCCCCGAAGGGACTAGAGATG
AATCTTAAACCTTTCTTAGGCAAGAAAAAGTGAAGTCCCGCATTTAGAAA
TTTTGTTTGAAAACCACACGGGTCACGTGTTCTGGATGGGAAATAAGTTG
CTTCGTTTCCCATCCTGGATTTTCAGATCTAGCCCCTTCGGGGCTTCGAA
ACAAATGGGTCCCAGACCTTTAGACTCTGGTCTATTTTGGAGTCTATGTA
TGATAAGAAAAAATGACAGTTTTTTTATTTGTGCAGGAACAATATCGTCC
ACCACCAAAAAAGTGGTTCATATATGAAAAGATGTCGTTACAACTCGACT
ACTGATCCACTATGTCCCATATTCAAGTTGAGAGATATTGTGGAAAGTTG
TGGCGACGATTATACTCAAGTTGGGTTCGAGGTAATGTTTTTACAAAAAC
TGAGACATGTAGAATAGAGGAAGAGAATCTAA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_036723	XLOC_036723	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_309	supercontig	scaffold_309:677087..694568 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	3.53401	1.2045	10.2262	11.1772	6.96738	7.55376	0.99729	2.91511	0	0	0	0	0	0	0	0	0	0	0	0	0	0.412862	0	0	0	0

Blast

[Close]

BLAST of TCONS_00058303 vs. Swiss-Prot (Human)
Match: P2RX4 (P2X purinoceptor 4 OS=Homo sapiens GN=P2RX4 PE=1 SV=2)

HSP 1 Score: 176.792 bits (447), Expect = 1.027e-51
Identity = 102/258 (39.53%), Postives = 152/258 (58.91%), Query Frame = 1

Query:   28 FLLSYETGKVVEIQNKKVAFWYRLIQLSXXXXXXXXXXXXDKGYQEIDSAISSTNTKVKGITHVNFGNFPSTFFNGRMIYDPQDYVI-KQDGDSFFVMTNMVITPKQYQGKCPEDPESYRTICKTDKDCQQGTSNKYGHGERSGRCVPSDRNSTVKVCESYGWCPTEYDV-LPMENYNNFSKTIPLLDGTKESTVLIKNQIHFPKFKVTRNNIVHHQKSGSYMKRCRYNSTTDPLCPIFKLRDIVESCGDDYTQVGFE 795
            FL  Y+T ++V I+++KV    R +QL ++ YVIG+  +++KGYQE DS +SS  TKVKG+   N          G  I+D  DYVI  Q+ +S FVMTN+++T  Q QG CPE P++  T+CK+D  C  G++  + +G  +GRCV    N +VK CE   WCP E D  +P   +         L   +  T+L+KN I +PKF  ++ NI+ +  + +Y+K C Y++ TDP CPIF+L  IVE+ G  +  +  E
Sbjct:   11 FLFEYDTPRIVLIRSRKVGLMNRAVQLLILAYVIGWVFVWEKGYQETDSVVSSVTTKVKGVAVTNTSKL------GFRIWDVADYVIPAQEENSLFVMTNVILTMNQTQGLCPEIPDA-TTVCKSDASCTAGSAGTHSNGVSTGRCVAF--NGSVKTCEVAAWCPVEDDTHVPQPAF---------LKAAENFTLLVKNNIWYPKFNFSKRNILPNITT-TYLKSCIYDAKTDPFCPIFRLGKIVENAGHSFQDMAVE 249

The following BLAST results are available for this feature:

BLAST of TCONS_00058303 vs. Swiss-Prot (Human)

BLAST of TCONS_00058303 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
P2RX4	1.027e-51	39.53	P2X purinoceptor 4 OS=Homo sapiens GN=P2RX4 PE=1 S...	[more]

You are here

TCONS_00058303 (transcript) - C. hemisphaerica