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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00058351 ID=TCONS_00058351|Name=TCONS_00058351|organism=Clytia hemisphaerica|type=transcript|length=1465bp
TGCTAACTTTTTTTAGCTGTCAGAAAAGGAAAAGTGAGGGCAGGTAAAAT
GTACAAGCTGCTAACTTTTTGATGCTttttttttaatgctttaaggATTA
GTTATTGATGTAACTTGAGGTTGGAaagttattttcttcttttcgttTGT
ATTTCGTCTTCTTAAATTCCATCCGTTTTCCTCTTCACATACACATGCAT
TGAGTATTGAGTGAGGAGGTAAAAATGGATTTTCTGGTATTTTGAACTTC
TTTTTACCGagaaaatataagaacaatataCAGTAGGAGTATTCCGGTCC
CTCTGTTCCATTCGATTGGACATGGAAAAAggttctttttttctttaaat
ttcaaaagttcaCATACACATGCATTGAGTATTGAGTGAGGAGGTAAAAA
CGATTATTTAGTATTTTGAACTTCTTTTTACCGAGAAAGGATGAATATAA
GAAGGAAGTATATCCCCCTGTTCCTTTTTCATTCGATTGGACATAGAAAA
AGGTCTGAAAATTATCATTCATAACATTACATGTATTTTTGTTCTGGACT
TTATCGTGTTGAATCGTCGGATTGATATGTTTTGACTGTAATCTCATATC
CTGACGAGTCTGTAAGAGGAACAGCAGTGTGACTATCTATGAATGATTCG
TCTCAAACAGCGACTTTCCTGCTATGTATAATTGCTCCATAACACTAGGA
AAAGTTTGTTGGAAACTTTTGTAATTGTTGTGAGAAAAATTTCACAAATG
TTTGTTGGTTGTTGTCAACGTCtataaaactttttgtgaacTCTTGAGAA
AAGGTTACGTCATTCGAATGATTTTCTCTCGTCTTTACAAGTGTTTACTA
CGTTGAATTTTGTTTGCTCTTGAAGTTCTTTCCAAAAGTGACATATAGAT
TATGTGATAGGTGCTGGAATATTTATTGAACTCTTTTTATCTTCGTTCAA
AAAAGTTCCAAAGTGTTTATCTCCTGTTGAGTGACAAAGAATTGTTGGAG
ATTTTCCATTTATGTAGGGTCAAGGttaaattctttctttttctttcatt
ttgcgATGTTGTTTATGAAGCTTCTTTGAGAAGTTTCAAAGAGAATTTCT
GAACATAAGTTACAGCTCAATCTGCTTATTTTTGTTACAGAACTTTATAT
GGTTGAGGAAAGGTTTCGTTCATGTTTAGTTATTTTGTGGTTGAAAAAGA
AGTGAGGTTTGCTTGAGAAAATCATGATCGCAATTGATCGTCGGTTATat
agttacacgtttttttttataaggaaccttaactttccTCTGAGCCtaga
gttccttatttttacagagaatttcagcctcaaagttccttatcgagttc
cttatttacatagctgctaagtttggataaccatctcttactgttcctta
aaacttgttttcttattctcagcttgagaagttcctaaacaattccttat
tttttggaccatttt Run BLAST on NCBI transcript from alignment at scaffold_309:869483..870947 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00058351 ID=TCONS_00058351|Name=TCONS_00058351|organism=Clytia hemisphaerica|type=transcript|length=1465bp|location=Sequence derived from alignment at scaffold_309:869483..870947 (Clytia hemisphaerica)
aaaatggtccaaaaaataaggaattgtttaggaacttctcaagctgagaa
taagaaaacaagttttaaggaacagtaagagatggttatccaaacttagc
agctatgtaaataaggaactcgataaggaactttgaggctgaaattctct
gtaaaaataaggaactctaGGCTCAGAggaaagttaaggttccttataaa
aaaaaacgtgtaactatATAACCGACGATCAATTGCGATCATGATTTTCT
CAAGCAAACCTCACTTCTTTTTCAACCACAAAATAACTAAACATGAACGA
AACCTTTCCTCAACCATATAAAGTTCTGTAACAAAAATAAGCAGATTGAG
CTGTAACTTATGTTCAGAAATTCTCTTTGAAACTTCTCAAAGAAGCTTCA
TAAACAACATcgcaaaatgaaagaaaaagaaagaatttaaCCTTGACCCT
ACATAAATGGAAAATCTCCAACAATTCTTTGTCACTCAACAGGAGATAAA
CACTTTGGAACTTTTTTGAACGAAGATAAAAAGAGTTCAATAAATATTCC
AGCACCTATCACATAATCTATATGTCACTTTTGGAAAGAACTTCAAGAGC
AAACAAAATTCAACGTAGTAAACACTTGTAAAGACGAGAGAAAATCATTC
GAATGACGTAACCTTTTCTCAAGAgttcacaaaaagttttataGACGTTG
ACAACAACCAACAAACATTTGTGAAATTTTTCTCACAACAATTACAAAAG
TTTCCAACAAACTTTTCCTAGTGTTATGGAGCAATTATACATAGCAGGAA
AGTCGCTGTTTGAGACGAATCATTCATAGATAGTCACACTGCTGTTCCTC
TTACAGACTCGTCAGGATATGAGATTACAGTCAAAACATATCAATCCGAC
GATTCAACACGATAAAGTCCAGAACAAAAATACATGTAATGTTATGAATG
ATAATTTTCAGACCTTTTTCTATGTCCAATCGAATGAAAAAGGAACAGGG
GGATATACTTCCTTCTTATATTCATCCTTTCTCGGTAAAAAGAAGTTCAA
AATACTAAATAATCGTTTTTACCTCCTCACTCAATACTCAATGCATGTGT
ATGtgaacttttgaaatttaaagaaaaaaagaaccTTTTTCCATGTCCAA
TCGAATGGAACAGAGGGACCGGAATACTCCTACTGtatattgttcttata
ttttctCGGTAAAAAGAAGTTCAAAATACCAGAAAATCCATTTTTACCTC
CTCACTCAATACTCAATGCATGTGTATGTGAAGAGGAAAACGGATGGAAT
TTAAGAAGACGAAATACAaacgaaaagaagaaaataacttTCCAACCTCA
AGTTACATCAATAACTAATccttaaagcattaaaaaaaaAGCATCAAAAA
GTTAGCAGCTTGTACATTTTACCTGCCCTCACTTTTCCTTTTCTGACAGC
TAAAAAAAGTTAGCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00058351-exon-scaffold_309-1491911889:869483..870947 | TCONS_00058351-exon-scaffold_309-1491911889:869483..870947 | Clytia hemisphaerica | exon |
| TCONS_00058351-exon-scaffold_309-1510915933:869483..870947 | TCONS_00058351-exon-scaffold_309-1510915933:869483..870947 | Clytia hemisphaerica | exon |
| TCONS_00058351-exon-scaffold_309-1575043694:869483..870947 | TCONS_00058351-exon-scaffold_309-1575043694:869483..870947 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_309 | supercontig | scaffold_309:869483..870947 . |
Blast
The following BLAST results are available for this feature:
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