TCONS_00058394 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058394
Unique NameTCONS_00058394
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length136

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058394 ID=TCONS_00058394|Name=TCONS_00058394|organism=Clytia hemisphaerica|type=transcript|length=136bp
TACTGTCAATCATACTTACAATTTTGTCAATCCAGCAAATGGTGCCCACA
CACAAAATATCGAATCCTATTGGAACAAATTTAAACTGGTCATCAAAGCA
ATGAAGGGCATAGAACTGCAATATCTACAAAGTTAC
Run BLAST on NCBI

transcript from alignment at scaffold_310:103553..104025+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058394 ID=TCONS_00058394|Name=TCONS_00058394|organism=Clytia hemisphaerica|type=transcript|length=473bp|location=Sequence derived from alignment at scaffold_310:103553..104025+ (Clytia hemisphaerica)
TACTGTCAATCATACTTACAATTTTGTCAATCCAGCAAATGGTGCCCACA
CACAAGTAGGTTGCAGATTTGAATGTATTTGTGActatttacttttcatt
attTACAAAATATGACAAATAACAGAttgattttttgtgttttaaaggct
gtCTCAAATTATCTCTTAAAACAGAATGGGCTGCGTTTTTGATATGATTT
GAATAAGATTTTGTGCTCAATAAAAGGGTATTCATAAGTGAGAAGCTGAA
AACTTCTTCTTGACTGACTTTATCTTTTTAACAGTTACTAAACAAAGAAC
GAAATTTATCTTCTGAAATCGTAATTATTTGATGCAgcgctttttgatga
tttttcaccTATAGAATAAAGCTTTCTATAAAATCTTTTCAGAATATCGA
ATCCTATTGGAACAAATTTAAACTGGTCATCAAAGCAATGAAGGGCATAG
AACTGCAATATCTACAAAGTTAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036784XLOC_036784Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058394-exon-scaffold_310-1491911889:103553..103607TCONS_00058394-exon-scaffold_310-1491911889:103553..103607Clytia hemisphaericaexon
TCONS_00058394-exon-scaffold_310-1510915933:103553..103607TCONS_00058394-exon-scaffold_310-1510915933:103553..103607Clytia hemisphaericaexon
TCONS_00058394-exon-scaffold_310-1575043694:103553..103607TCONS_00058394-exon-scaffold_310-1575043694:103553..103607Clytia hemisphaericaexon
TCONS_00058394-exon-scaffold_310-1491911889:103945..104025TCONS_00058394-exon-scaffold_310-1491911889:103945..104025Clytia hemisphaericaexon
TCONS_00058394-exon-scaffold_310-1510915933:103945..104025TCONS_00058394-exon-scaffold_310-1510915933:103945..104025Clytia hemisphaericaexon
TCONS_00058394-exon-scaffold_310-1575043694:103945..104025TCONS_00058394-exon-scaffold_310-1575043694:103945..104025Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_310supercontigscaffold_310:103553..104025 +
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00058394 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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