TCONS_00058429 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058429
Unique NameTCONS_00058429
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1810

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058429 ID=TCONS_00058429|Name=TCONS_00058429|organism=Clytia hemisphaerica|type=transcript|length=1810bp
CCAAGATCAAGTCGACAAAAGATTTGAAGAGGCTTGAAAGCTATAGcaag
cattttgttttgaagataAATGCTTAGAAAGATCTAACGCGACGATTCCT
AGACCGCTCAAGACAGGAACAAGATTCACTGtaaaaaaataaaccagcta
tcatcatcatcatatgCAGCGAACCAGGTTAATTGTTTAAGAAATCGATA
TCAGAGAGACCAAAATGGTGTTTAGCCAATTCCTAAAGATTCTAATGATT
CAACTTTTGCTGGTATCAAAAGTGAAGTCTAACGATCCACAACCAACAAC
GCGTGCGCCGCAAAccgccaccaccaccaccaccaccacaacCACAACCA
CAACCACCAACACCACGACCAAAGCACCAGATTTAAACCTAAAGGTCACA
AGCCAAAAGACCAGCCTATCATACCTACGCGACGCAGAATCGTTCAGTGG
aaccaaaatcaaaatggtagctggtGTTTACATGGTAACTGAATGTGTCT
TGTTATGCGAGAAAGATGAGAGCTGTGATTTCTCTGTTTTTGAAGACATC
CACCACAATTGCACTTTATACTCAATGAGGGATGACAacaaaactacaga
ccagaTAGAAGAGACATTGGTTAGCCAAACTGCAGACCCAGACATGGACC
AAataggttttcaaaaaaatgaacgGCCATCATGTAAAAGGATTGCATTC
AAGACACGAGAACACTCAAATCAATTCGACAAATCACCTCGAACCAGATC
ATGCATTGCGAAATATGCTTACGAGACAAGAGGCTGCTACAATGCGTGTG
GAAGCAAAACAGGGTGGTGCAGCGATCATTGCGGGGCGGGAGGGGCGTGT
TGTAGATATGGAATATCCGAAGAGGGCATGGATAGGGAATGTGTTTTATC
GAACGTTGATTGGTGTAGGGGCTATCACTGTTGCTCTCCAGGAACAACTT
ATGGGTCATTCGCCAACAGTTCATATGCTTTCATATTCTTTGGACGTTGG
CCTGATAACGCCGGACACAGGTGTGGCAGACTTGGGATGAAACTTGCAAG
TGTTGGCTCTTATGACGAATTCAAATACATAAATTCATTTATGACCATGA
CCTCGGATTACTACTGGTTAGATTACCAAAAGCCTAACGGTACAACACAA
TGGAAATGGGGAAATGGAGAACTTTTTCAACCAGAATGGTGCGAAAGAGT
CAATGGAGCACAACACAGTTTGATTGGAGATTTTTATGGGCATGTTTATC
GACCCAAAATGTGCATGGATTATTCATATGGATCGTCTGACAATTTTGTT
TGTGAGAAAGAGAACGACTTGCAATCGACCGTCTTCTGAATCACATCAtg
agcaacgcttacctcgtttaCAAAATATTGTTATGGTAAATAATTCCCAG
AAGAGTTCACAAGAAGTTTattctatttgaaaaaaagagacACTTGAAGA
TTTAAGAGATTTAATTgccttggtaatggtttcaaaacgaggcagtcgtt
gtGCTCAAAAGAATTATGAAAAATCCCACCGAGTTTAAAACTCAAGAACC
GGGCCCAGGAGATACTAAGGGTTGTGATTTTTTCCCTTTGTCGCTTCTCT
CAAGAAATATTTCGTCTCTAAGGGTCAAACGGGTCATCACctttaaacac
ccccttctcatagactcACTAGGACCTCTTCCCGCCGGAACAATTGCCCC
CGGTgggaaattatcctccaattttgtccccactgaaaaaaaacaatcct
aaCTGCGAAATATTTACCACTTTTCccatccctactgaattttttactta
aaaacaaaag
Run BLAST on NCBI

protein sequence of TCONS_00058429-protein

>TCONS_00058429-protein ID=TCONS_00058429-protein|Name=TCONS_00058429-protein|organism=Clytia hemisphaerica|type=polypeptide|length=374bp
MVFSQFLKILMIQLLLVSKVKSNDPQPTTRAPQTATTTTTTTTTTTTTNT
TTKAPDLNLKVTSQKTSLSYLRDAESFSGTKIKMVAGVYMVTECVLLCEK
DESCDFSVFEDIHHNCTLYSMRDDNKTTDQIEETLVSQTADPDMDQIGFQ
KNERPSCKRIAFKTREHSNQFDKSPRTRSCIAKYAYETRGCYNACGSKTG
WCSDHCGAGGACCRYGISEEGMDRECVLSNVDWCRGYHCCSPGTTYGSFA
NSSYAFIFFGRWPDNAGHRCGRLGMKLASVGSYDEFKYINSFMTMTSDYY
WLDYQKPNGTTQWKWGNGELFQPEWCERVNGAQHSLIGDFYGHVYRPKMC
MDYSYGSSDNFVCEKENDLQSTVF
Run BLAST on NCBI

transcript from alignment at scaffold_311:144469..158776+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058429 ID=TCONS_00058429|Name=TCONS_00058429|organism=Clytia hemisphaerica|type=transcript|length=14308bp|location=Sequence derived from alignment at scaffold_311:144469..158776+ (Clytia hemisphaerica)
CCAAGATCAAGTCGACAAAAGATTTGAAGAGGCTTGAAAGCTATAGcaag
cattttgttttgaagataAATGCTTAGAAAGATCTAACGCGACGATTCCT
AGACCGCTCAAGACAGGAACAAGATTCACTGtaaaaaaataaaccagcta
tcatcatcatcatatgCAGCGAACCAGGTTAATTGTTTAAGAAATCGATA
TCAGAGAGACCAAAATGGTGTTTAGCCAATTCCTAAAGTAAGTATGAAAA
CTGAAATGGAAGTTTTGACTCAGACTCggatatttttgattttgagccTG
AAGATGGTATTAAGGTTATCctttttatgatatagaaaggAGCTGCTTAT
TTTCTTATgctgaaaatgcagaataaacaaaataatatcttgaaatttgt
tgttgtacagttactcttaggttccaaataaacgggccccccccgcttgt
taatttttcgaaaattttccaacccccccggaccttattaggaccccccc
ccgtttatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNccaatttgtagacaaaaagtc
gctggagaattttggaggaaagtattaagcaatagatttcaccttgaaga
aaatgttgatcgaaacatcttgtcatttgatgaaggattgcaaagtttac
aggcccttttttaatccaaatattttcttacaccaatatcagaaacaatg
aatctcgtcttatcttatttccaacacttaagttagccaataagatttca
cctatcaacaaaagaaggcattaaaaatgcacgatatatgagattatgag
catgcatacctcgtaatttttttaatcgtagggcgagcatggttacaata
ggatacttctcctgtttctttatacctccatggtttaAAGCCCCCTCCAC
CCAAATTCAATGTTGTTTTCAAGACTTTCCCCAGTCCCAACAAGTTCCCG
AGTCCCAACAAATTCCCCATCAAAGCTGATATTGGAGGAGGGGTTGGAAA
ACCAGTTTTGTCCAGAATTGTATTTCAAGTTTAAGGGCTcagaccatagt
gaattttcattatttgctacgtacaaaatataaatttctacttgatgtag
ctaACAAAACTGTGGCATACTATACATTTTCTGTTCGGCCAATTATCCTT
GAGTCGGAAAGTTAAATGGATtaacaacttttctgtaatagccagagaag
tcataaaactctttagaaatttccTTCAAGTTTgcctcctttgattacca
atccctgatagcaaaaatcagtcaagatagagattataagaactaaagta
aagttattcAACGAAACCTCGTGtttttaggtaaaatgcgaatttttttc
gagtaataatttctttatagttttaaaagaagttttttattttatcggga
aactttcaagaggtaaacttcttcaaattttgtgaattctttgttgtttt
tggaaggttctttgctataaatatctttagatctaaaatagcaGCTGCCT
TAAAATTTCgatagaatatagttgaaagatttgcattagtaaatatgtaa
aaattgacaaaatttaccgaggattccctgagcagcgaacatttcaaatt
cgatgttctgtgcttattcttgcaaggttttcttatgttttataaacaaa
actgtcatcacacNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNTTGTTCCTAAAATTTTGGCCAGCagagcctt
atgttcttatataaaaaaacgtgcaaggtaaaatattttaaaccaaaCCC
TGCTTTAACCatccatctgattatccctctTTGACATCAACAAATTTTCT
TCTAGGATTCTAATGATTCAACTTTTGCTGGTATCAAAAGTGAAGTCTAA
CGATCCACAACCAACAACGCGTGCGCCGCAAAccgccaccaccaccacca
ccaccacaacCACAACCACAACCACCAACACCACGACCAAAGCACCAGAT
TTAAACCTAAAGGTCACAAGCCAAAAGACCAGCCTATCATACCTACGCGA
CGCAGAATCGTTCAGTGGaaccaaaatcaaaatggtagctggtGTTTACA
TGGTAACTGAATGTGTCTTGTTATGCGAGAAAGATGAGAGCTGTGATTTC
TCTGTTTTTGAAGACATCCACCACAATTGCACTTTATACTCAATGAGGGA
TGACAacaaaactacagaccagaTAGAAGAGACATTGGTTAGCCAAACTG
CAGACCCAGACATGGACCAAataggttttcaaaaaaatgaacgGCCATCA
TGTAAAAGGGTGAGCTTATTATGTCTAACACAAGCCGACACAATGTTGAA
GTTTTTTGTCTTAATATCTTGAATACCTTTAAAGAACGAAGAAATACGGC
CATCTAAAGTTTGAAATTCTGACAGATAGAGTACGATTGGcgtcaaattt
tgtctaaaccGTACGGAGTCTGACAGAATTTTGAACTTTAAGTGGCCGTA
ATTCTTTGCGTGTTCGAGTAAGAGACTTGTTGTAGcataattttttgctc
agaatttcatgctttttCCAATGGTCCCATTCATTTCTTTCagatttgac
ttttgaaaaacgtcaatatttttactcattttttcccTTACAGTTATGCC
TGTAACCGTCAGTTTTTTagtcataaaaacttttgccggTCCTAATTCGC
GGGTCCCCTCTCAAAAGAGTCTAAAAACCTTCCTACTTTCGAACTAACTA
CATGTGgttgcgtcgcataaaagatgtcacggatccTAAGGATTGGCCTC
CTAATAAAACCTAACGAGTCGCTTGAGGAGCTTAATGTTATCAGGAGTAT
TCTGGAAGGTTATAAGGGAATAAAATTCACTACTACTTTGAAATTGAATT
AGCCCTTTGAAGagcaaaaaaatgccaaaacgttaaatttgttgattttt
acatttttgacgtttttcatCGCAGCaattaataaaattaaaaagtcata
GGTTTACTATGAacataagaaagccgcggctggaatatgtaccgcattgt
cttttcagttaattgctgttccatctgtCTCcgtgaactaattttggaca
tattttaggggtattttgtggaaataatagtttttcaccaaaattgagat
tataagaactatattcaagatgacaactctcctgtcagtttgaatgataa
atttcgaaggtgctggcttgaaattttcacagtattatcttgatgtacat
tttcattgatttctaaaataatttcactgaaatattgtgaaggcatttga
GGCACTTTActaatttttgatttctttcagctcagccattttgtgcttgt
ttaaatttcttattgttgatctttcctttacaatgattttataatgcaag
tgtattatcaagggcatattattaatgtctaaaacgcactgagaagtgaA
TATTAatgacaaaccaataaaatttaccattaatgatgctacattactga
tttcttgatcaacaaatagtcatcaaatacgacagagatagaacaacaga
aattcagatgttatcattccagccgcggctttcttatacNGGCTTTCTCA
TACTATGCTATGAATAcgctcttctcgagatgcataaatttattgttgtc
ctcgttttcaaacagattttattgctataaaattacatattttcaatgat
aattgtgttgtttgcacctcatgagacattttgaattttaagtacTTTca
ttttagagttaatgtttcccttttgggaatttaaatcggtttaaatgtat
aatttcatagcaatgttGATGTTGagaacgaggacaacaataaatttatg
catctcgagaagagtgtatttgtACAGAGTAAGTTATTCGCCGGTGAAAA
TTTCCGTCACTGACTGTAAGGTCCCAAATAAACGTCTAACCCAGGTTAtt
aattttctaaaatattttcagctatcaGCCAATAGCTGAATTGCTCTTGA
TAGCCTGGCTTTAGTTTATCATTGCCTTATTTTGTGGGTTTTAaaggtac
aatttccaacccccggcaATTATATCCATTCAGGTCAAATTTATACAGCA
TACCATTTTAAGTCGTTGGAAAGTCGACCGTTTTAACTAAAGCATAGTCA
ACATTTTCATCGAATTTTCGCCACTTTTTTCGACGACGAGCTATAATTGT
TTCTCTCTGTTCGtgatatttatgacgtaatgttttacaCGGAAACACCC
AAAATAAACCGGGTGTTTGACATTAGTTTTGAATCGAAACAAAGACAAAC
GCCTgagctattcatgatatgcaccactggagagtcttctaaaattttcc
acccaatacgtcacttaataaacaatagaaaaagtgacgtattgggtgga
acgaaAATagaaagttgcataatttcgtgaagtcattacagttgtgcata
tcatgaattttcgGTGCTTCCGTatgaaacattacgtcatgaatattgtG
ATTTTCTTAGATTGCATTCAAGACACGAGAACACTCAAATCAATTCGACA
AATCACCTCGAACCAGATCATGCATTGCGAAATATGCTTACGAGACAAGA
GGCTGCTACAATGCGTGTGGAAGCAAAACAGGGTGGTGCAGCGATCATTG
CGGGGCGGGAGGGGCGTGTTGTAGATATGGAATATCCGAAGAGGGCATGG
ATAGGGAATGTGTTTTATCGAACGTTGATTGGTGTAGGGGCTATCACTGT
TGCTCTCCAGGAACAAgtaagatatttttaaaaattctaattttgccaTA
CATAAAGCATAGGGATTCCCGTTTatttaaggttttgtttttaagtaaga
gtgatatcgtttgcttactcatcaatttaaatttacaagctttttcacat
tgaattgacacgtatgtggagcaagattggtcagaaagaggaaaagaaaa
ttttttttctcgcttagatcagcataatataacaaaaggcaTACACTGGC
cttatatgaaatatgtgtctgatatgaaacgggaacacttatgtaaaaat
taaaacctttaaTATCAGCTAAATGTTTCAAATCAGACAATTAAGCATTT
CCCATTCtgagatattttgaaattttttattgataCAACTCCCAAGATCT
TCCTATTCTTTATTAAGGGAATAAGAATTTTTGGGCGGGGCTCGAGCTTT
CCTCAAAATCTAAAgattgttaatcgatatctCCTTGGTTGTAACACCTT
GTCCTACTTtcatcggattaaatttcgtgagattaaatttcgcgagccaA
AAAACCGCAaatttttctggatttaatttcgcgagtcaggaatctcacgc
gttttCGCGAGCTTTAATTTCACTTTACTTGACGTGgcagaaattcgcga
aattgcgaaatttaatctcacgAAATTTTATCCGATTAAAATATCACTTT
ACTTAAACAAACTACTCAATATCAATATTCATATCTCGAAATTCGCCATA
CGTAGTCGAGTTATGGAAACTTCACTTATAtattctttgccacggaaagt
catatgacatctttttcaaccaataagatttaataatttcgagggtaaaa
caaacactatggtttaactcactaaaagattatgtttactgaaaacacat
aattaatctttagtaagtgttctgttgtaccccagttctgacgtcatgcc
gtggcgaagaatattttttgaaatccatCTAAAAATCTCGTTATTGATAT
TCCTTCAGCTTATGGGTCATTCGCCAACAGTTCATATGCTTTCATATTCT
TTGGACGTTGGCCTGATAACGCCGGACACAGGTGTGGCAGACTTGGGATG
AAACTTGCAAGTGTTGGCTCTTATGACGAATTCAAATACATAAATTCATT
TATGACCATGACCTCGTAAGTTTTTACTTTAGACGTGGGTAGTTGTAgct
tgtgggttcgatcccaaGCCGAGTcgtaccaaagattcccaaaatgaaaa
ttgatgcctctctgattgatgctcagcaattaagagaaggatcaagggta
agtggaaaaatccagggagaaagagtggcgccctcccctaccttcggatc
gacagctatcgaaagaggaggcTTCGGGTCACTGTTGCAGACTTTCTCAC
TTAAGAGTTTATTCTCGCgaaaaattctataaaaatttgaaaatagctTC
AACCCTTCACAAATGATTCACGAAAATTTAAACGCGTAAAGCATAAAGTA
CCCGACTCTCCTTGATTTCAGGACCTCGTAAGGTAAACCGATTCTCCTAC
TCTTGTGTGGTTAATTGTATGATGGCGggttattttgcaatttttggaaa
aaaatcatccccatatcactttataatgaccccACCCTATTTTATGACCT
TTATGCTACGAAGTGCCAAAATGGGCATTTTCCTAGagatttttagcaaa
atcaggtCAATAGCGCTTAATTATGACTCCccaattttgttgatttttat
ctggAGTACCCACCCtctgcttattccaccccctacaattaagcacacaa
gagtCGAGTAGTGTGAAATCTCATGTCATCACGCTTAATGCTAATaatcc
aaaattttgctcaACAATCAATTCGAACCTTTTTCGGCTTGAAATTAAAA
CTTCCGATAATTCGAGAGACGAACCAAGCTGGTCGGCTAAACAAGACCCT
ACAAGAAATATTTAGAAGATAAAGTGCCAGCTTGGCTttgtcttttcttt
tcaaagtggCTGTGTACTGCAACACTATTCCAATTTTCGTCATTTAAGCG
CTTTTGATTGTTGagttaactttttgattttcgtaGGAGCAAAAGgagta
tttttatgtgtaagggactaagaccatgttcagacgttacggttctcaac
ttcagttgagctataatctgagaatgtctgtatgtatgtatgtctgtctg
tctgtatgtatgtctgtatgtctgtatgtccgtccgaaaactttaNNNNN
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NNNNNNNNNNNNNNNtgctacctaatactaaatatttgaaatgttacaat
tgggccttctaataacgggaaaatctgaagttgagcccagtgcggtgcgc
acgttcgactattttgtATTGCTCCGGTGTGGTATTTGTTACGGGTAGGA
AGTGTTCATACTCATTTCGGAACGATTTGGAGCAAGAAAACgaagcagtt
ccgttccgatgaaaatagtggagcgaaaccgtttcaatctgttttgcttt
gtaacatCTTCTTTTTTAACGTTTCCAAATTTGACGTTTCCAAATTTGAC
GTTCACACAGTGTTTCGGAACGAAACGCGAAACGGAACATGGCGTGTGAA
CGTGGTTTAAGTGCCTTGCGGGGGAGGGGCTATCTATTTCTCTGTATTCG
TTTTGTAAGTAGTATATGTTCGTAAGTGTAATGtttaaattattaaaaac
aacctagtttttgtattttctcttTTGACAGGGATTACTACTGGTTAGAT
TACCAAAAGCCTAACGGTACAACACAATGGAAATGGGGAAATGGAGAACT
TTTTCAACCGTAAGTATACCtaactctgtaccagagtgtatctcacgttt
atcgcttcgtagtacactgttgtttgtttgataaaaaaattcccgtacgg
agacctctgcggtgaagtttgaaattagcaacacttctctcatcgtctcc
ctTCTCTCACCAGCACTCCATCGCagtggtcggtttgaaaaatctcgaAT
GAGAAAAGTCAATGACAACAGACACtttacggcaatgaattttgaaatta
gccgtaaatactgggtctgtgtacagactaaagtataccttaagggaagg
aATTTTGATGGAACTAATTATCGCGGAATTTACTTTCGCGGTGCGAAGGT
ACTATATAGGCGGATTTTGCGGTTGACATCTACTTTTTGCcgaaattctt
tcatattcctaGGGTCTTTTGAGggtttttaagtaaaaattgcattccgc
ggaaattagttcccttaagtaAAGTACGCTTTTTTTTCGGATGCtccaaa
ctttttgagtttaatacctaaaaataattattttctagcttattttctta
aaaaaaaatttgccttgaccacccctgatataCCAACCATATTTATGCTT
GTTGGGGCAAGGCTTTACAAGATAATAGATATAAAAAAATCGCCTAATTT
GAGCCCTCTAGCCTTAGCAACTtgtttgcttataaaaaaagaagataaat
aGATGGGTTTGAGGCTATTCAATTCATCAGGgataaattttgatatgttG
AAAGGGGTAAGATTACATCATCGCACCAACAAAAGATTGACAAACTTAGG
AAGGCTTAGGCCGACTCTAAAAAATGATGGTGAACGCACTATAAATAAGC
TCTTCTTTTATATGAAAGTAAATGTAAACTTTATATAAACAAAATCGAAG
AGGAAAATACGAACAAGCTTTCAAAAACGAAACTAAAATCAACGTTAAAA
CTCCAATTCATGTAGCAAAAACTCCAATTCATGTAGCGAAAACTCCAATT
CATGTAGCAAAAACTCCAATTCATGTAGCAAAAACTCCAATTCATGTAGC
AAAAACTCCAATTCATGTAGCAAAAACTCCAATTCATGTAGCAAAAACTC
CAATTCATGTAGCAAAAACTCCATTGTAAACCATAGACGATTGAAATTCG
AAAAGCGAAGTAAAATAGGGAGCGTGCAGCGCGAAATGAAGACTGTCGAA
TGATTGATACTCGAAAAATTGTCACTCGAAAGATTGTCACTCGAAAGATT
GTCACTCGAAAGATTGTCACTCGAAGAATTGTCACTCGAAGAATTGTCAC
TCGAAAGATTGTCACTCGAAAGATTGTCACTCGAAGAATTGTCACTCGAA
AGATTGTCACTCGAAAGTTTGACACTCGAAGCATTGTCACTCGAAGAATT
GTCACTCGAAAAATTGTCACTCGAAAGATTGTCACTCGAAAGATTGTCAC
TCAAAAGATTGTCACTCGAAGAATTGTCACTCGAAGAATTGTCACTCGAA
GAATTGTCACTCGAAAGATTGTCACTCGAAGAATTGTCACTCGAAAGATT
GTCACTCGAAAGATTGTCACTCGAAAGATTGTCACTCGAAAGATTGTCAC
TCGAGTGCAGACAATGAAATgggaaaaattggaaaacaattggaaaagtt
gaaaaagttcgagaaaaaaaatgggGCCGGGTGACggcgaaaaaagattt
tcacccGGCTGTTGGACaggaaacaaaatattttttagggtCGGCCTCAG
TGGAATTCTTGGTTTGAATAGATTTGAATATTAGttttcaacttcagttg
agttagaatctgagaatgtgtgtgtgtgtgtctgtgtgtatgtcccaaaa
ctttggggcagcctggagacttcaaaaattgttcgatttggctgaaattt
ggcacacttgttccttgcatgaatatctgggggtcttttttcatttttca
aaatttttgatttttggggcctggggacgagtttttgccaaaacgaggct
aaaactttggggcagcttggagacttcaaaaattgttcgatttggctgaa
attttgcacacttgttccttgggtgaatatctgggggtgtttttttcatt
ttttaaaaattttgatttttggggcctggggacgagtttttcgccaaaac
gaggctaaaattttgaggcagcctggagacttcaaaaattgttcgatttg
gctaaaattttgcacacttgttccttgggtgaatatctgggggtgctttt
tgcatttttcaaaaattttgatttttggggcctggggacgagtttttcgc
caaaacgaggctaaaattttgaggcagcctggagacttcaaaaattgttc
gatttggctaaaattttgcacacttgttccttgggtgaatatctgggggt
gtttttttcattttttaaaaattttgatttttggggcctggggacgagtt
tttcgccaaaacgaggctaaaattttgaggcagcctggagacttcaaaaa
ttgttcgatttggctaaaattttgcacacttgttccttgggtgaatatct
gggggtgtttttttcattttttaaaaattttgatttttggggcctgggga
cgagttttttgccaaaacgaggtcaaagctttgaagcagcctacaggcct
ccaaaatgggcggatttggttgaaatttggcacacttgttcattgggtaa
atatctgggggtctacaattgggcctatgaataatttgaagccactgaag
ttgagcccagtgcgttgcgcacgttcgactattaatATCCAAACTACAAT
CATGATTTACTGCAATTGCTTTTCTGGGTATTTTAGCGTCTAAAGTTAGG
GCGAgaataacatttttaggcttaatcTAATTGGGTTTTCTATTTGGGAG
GGAAAtaatggcttccaggctatattctcagcttGTCAGACCATTCACAA
CCTTCCTAAGTTTTAAATCTCATGTTAAAACTGTGCTTTCTAAGCCTAAG
TTAAAACTTTCTCGCTAGAAagactaaattttttttttctttttttgctt
gaccatgaagcacaatccaatttctacgagttagaccaaaaatgacgatt
tcttaCTCGAACTGGGCattacatagcccatgtctgatatatacgacatt
ggcacttagagggttaaagtgagggtggacgaactaaaatcagtccttta
ccccctggaaattcatgaataattatttaccccctggaaaaatgaaaaaa
cacttaTTTAGAcctcctggaaattcttctcggattacctcctggaaatg
ttcgtccacccccccctGTATTGTCATATTTTAAACGGTGAAAAaaaatg
cggctattatatttgattttttccgTGAATGGCCCCAATATTATTGCCAT
AGTTGTACATCATATTGGTTTGTATTTCAGAGAATGGTGCGAAAGAGTCA
ATGGAGCACAACACAGTTTGATTGGAGATTTTTATGGGCATGTTTATCGA
CCCAAAATGTGCATGGATTATTCATATGGATCGTCTGACAATTTTGTTTG
TGAGAAAGAGAACGACTTGCAATCGACCGTCTTCTGAATCACATCAtgag
caacgcttacctcgtttaCAAAATATTGTTATGGTAAATAATTCCCAGAA
GAGTTCACAAGAAGTTTattctatttgaaaaaaagagacACTTGAAGATT
TAAGAGATTTAATTgccttggtaatggtttcaaaacgaggcagtcgttgt
GCTCAAAAGAATTATGAAAAATCCCACCGAGTTTAAAACTCAAGAACCGG
GCCCAGGAGATACTAAGGGTTGTGATTTTTTCCCTTTGTCGCTTCTCTCA
AGAAATATTTCGTCTCTAAGGGTCAAACGGGTCATCACctttaaacaccc
ccttctcatagactcACTAGGACCTCTTCCCGCCGGAACAATTGCCCCCG
GTgggaaattatcctccaattttgtccccactgaaaaaaaacaatcctaa
CTGCGAAATATTTACCACTTTTCccatccctactgaattttttacttaaa
aacaaaag

Coding sequence (CDS) from alignment at scaffold_311:144469..158776+

>TCONS_00058429 ID=TCONS_00058429|Name=TCONS_00058429|organism=Clytia hemisphaerica|type=CDS|length=6750bp|location=Sequence derived from alignment at scaffold_311:144469..158776+ (Clytia hemisphaerica)
ATGGTGTTTAGCCAATTCCTAAAGATTCTAATGATTCAACTTTTGCTGGT
ATCAAAAGTGAAGTCTAACGATCCACAACCAACAACGCGTGCGCCGCAAA
ccgccaccaccaccaccaccaccacaacCACAACCACAACCACCAACACC
ACGACCAAAGCACCAGATTTAAACCTAAAGGTCACAAGCCAAAAGACCAG
CCTATCATACCTACGCGACGCAGAATCGTTCAGTGGaaccaaaatcaaaa
tggtagctggtGTTTACATGGTAACTGAATGTGTCTTGTTATGCGAGAAA
GATGAGAGCTGTGATTTCTCTGTTTTTGAAGACATCCACCACAATTGCAC
TTTATACTCAATGAGGGATGACAacaaaactacagaccagaTAGAAGAGA
CATTGGTTAGCCAAACTGCAGACCCAGACATGGACCAAataggttttcaa
aaaaatgaacgGCCATCATGTAAAAGGATTGCATTCAAGACACGAGAACA
CTCAAATCAATTCGACAAATCACCTCGAACCAGATCATGCATTGCGAAAT
ATGCTTACGAGACAAGAGGCTGCTACAATGCGTGTGGAAGCAAAACAGGG
TGGTGCAGCGATCATTGCGGGGCGGGAGGGGCGTGTTGTAGATATGGAAT
ATCCGAAGAGGGCATGGATAGGGAATGTGTTTTATCGAACGTTGATTGGT
GTAGGGGCTATCACTGTTGCTCTCCAGGAACAACTTATGGGTCATTCGCC
AACAGTTCATATGCTTTCATATTCTTTGGACGTTGGCCTGATAACGCCGG
ACACAGGTGTGGCAGACTTGGGATGAAACTTGCAAGTGTTGGCTCTTATG
ACGAATTCAAATACATAAATTCATTTATGACCATGACCTCGGATTACTAC
TGGTTAGATTACCAAAAGCCTAACGGTACAACACAATGGAAATGGGGAAA
TGGAGAACTTTTTCAACCAGAATGGTGCGAAAGAGTCAATGGAGCACAAC
ACAGTTTGATTGGAGATTTTTATGGGCATGTTTATCGACCCAAAATGTGC
ATGGATTATTCATATGGATCGTCTGACAATTTTGTTTGTGAGAAAGAGAA
CGACTTGCAATCGACCGTCTTCTGAATGGTGTTTAGCCAATTCCTAAAGA
TTCTAATGATTCAACTTTTGCTGGTATCAAAAGTGAAGTCTAACGATCCA
CAACCAACAACGCGTGCGCCGCAAAccgccaccaccaccaccaccaccac
aacCACAACCACAACCACCAACACCACGACCAAAGCACCAGATTTAAACC
TAAAGGTCACAAGCCAAAAGACCAGCCTATCATACCTACGCGACGCAGAA
TCGTTCAGTGGaaccaaaatcaaaatggtagctggtGTTTACATGGTAAC
TGAATGTGTCTTGTTATGCGAGAAAGATGAGAGCTGTGATTTCTCTGTTT
TTGAAGACATCCACCACAATTGCACTTTATACTCAATGAGGGATGACAac
aaaactacagaccagaTAGAAGAGACATTGGTTAGCCAAACTGCAGACCC
AGACATGGACCAAataggttttcaaaaaaatgaacgGCCATCATGTAAAA
GGATTGCATTCAAGACACGAGAACACTCAAATCAATTCGACAAATCACCT
CGAACCAGATCATGCATTGCGAAATATGCTTACGAGACAAGAGGCTGCTA
CAATGCGTGTGGAAGCAAAACAGGGTGGTGCAGCGATCATTGCGGGGCGG
GAGGGGCGTGTTGTAGATATGGAATATCCGAAGAGGGCATGGATAGGGAA
TGTGTTTTATCGAACGTTGATTGGTGTAGGGGCTATCACTGTTGCTCTCC
AGGAACAACTTATGGGTCATTCGCCAACAGTTCATATGCTTTCATATTCT
TTGGACGTTGGCCTGATAACGCCGGACACAGGTGTGGCAGACTTGGGATG
AAACTTGCAAGTGTTGGCTCTTATGACGAATTCAAATACATAAATTCATT
TATGACCATGACCTCGGATTACTACTGGTTAGATTACCAAAAGCCTAACG
GTACAACACAATGGAAATGGGGAAATGGAGAACTTTTTCAACCAGAATGG
TGCGAAAGAGTCAATGGAGCACAACACAGTTTGATTGGAGATTTTTATGG
GCATGTTTATCGACCCAAAATGTGCATGGATTATTCATATGGATCGTCTG
ACAATTTTGTTTGTGAGAAAGAGAACGACTTGCAATCGACCGTCTTCTGA
ATGGTGTTTAGCCAATTCCTAAAGATTCTAATGATTCAACTTTTGCTGGT
ATCAAAAGTGAAGTCTAACGATCCACAACCAACAACGCGTGCGCCGCAAA
ccgccaccaccaccaccaccaccacaacCACAACCACAACCACCAACACC
ACGACCAAAGCACCAGATTTAAACCTAAAGGTCACAAGCCAAAAGACCAG
CCTATCATACCTACGCGACGCAGAATCGTTCAGTGGaaccaaaatcaaaa
tggtagctggtGTTTACATGGTAACTGAATGTGTCTTGTTATGCGAGAAA
GATGAGAGCTGTGATTTCTCTGTTTTTGAAGACATCCACCACAATTGCAC
TTTATACTCAATGAGGGATGACAacaaaactacagaccagaTAGAAGAGA
CATTGGTTAGCCAAACTGCAGACCCAGACATGGACCAAataggttttcaa
aaaaatgaacgGCCATCATGTAAAAGGATTGCATTCAAGACACGAGAACA
CTCAAATCAATTCGACAAATCACCTCGAACCAGATCATGCATTGCGAAAT
ATGCTTACGAGACAAGAGGCTGCTACAATGCGTGTGGAAGCAAAACAGGG
TGGTGCAGCGATCATTGCGGGGCGGGAGGGGCGTGTTGTAGATATGGAAT
ATCCGAAGAGGGCATGGATAGGGAATGTGTTTTATCGAACGTTGATTGGT
GTAGGGGCTATCACTGTTGCTCTCCAGGAACAACTTATGGGTCATTCGCC
AACAGTTCATATGCTTTCATATTCTTTGGACGTTGGCCTGATAACGCCGG
ACACAGGTGTGGCAGACTTGGGATGAAACTTGCAAGTGTTGGCTCTTATG
ACGAATTCAAATACATAAATTCATTTATGACCATGACCTCGGATTACTAC
TGGTTAGATTACCAAAAGCCTAACGGTACAACACAATGGAAATGGGGAAA
TGGAGAACTTTTTCAACCAGAATGGTGCGAAAGAGTCAATGGAGCACAAC
ACAGTTTGATTGGAGATTTTTATGGGCATGTTTATCGACCCAAAATGTGC
ATGGATTATTCATATGGATCGTCTGACAATTTTGTTTGTGAGAAAGAGAA
CGACTTGCAATCGACCGTCTTCTGAATGGTGTTTAGCCAATTCCTAAAGA
TTCTAATGATTCAACTTTTGCTGGTATCAAAAGTGAAGTCTAACGATCCA
CAACCAACAACGCGTGCGCCGCAAAccgccaccaccaccaccaccaccac
aacCACAACCACAACCACCAACACCACGACCAAAGCACCAGATTTAAACC
TAAAGGTCACAAGCCAAAAGACCAGCCTATCATACCTACGCGACGCAGAA
TCGTTCAGTGGaaccaaaatcaaaatggtagctggtGTTTACATGGTAAC
TGAATGTGTCTTGTTATGCGAGAAAGATGAGAGCTGTGATTTCTCTGTTT
TTGAAGACATCCACCACAATTGCACTTTATACTCAATGAGGGATGACAac
aaaactacagaccagaTAGAAGAGACATTGGTTAGCCAAACTGCAGACCC
AGACATGGACCAAataggttttcaaaaaaatgaacgGCCATCATGTAAAA
GGATTGCATTCAAGACACGAGAACACTCAAATCAATTCGACAAATCACCT
CGAACCAGATCATGCATTGCGAAATATGCTTACGAGACAAGAGGCTGCTA
CAATGCGTGTGGAAGCAAAACAGGGTGGTGCAGCGATCATTGCGGGGCGG
GAGGGGCGTGTTGTAGATATGGAATATCCGAAGAGGGCATGGATAGGGAA
TGTGTTTTATCGAACGTTGATTGGTGTAGGGGCTATCACTGTTGCTCTCC
AGGAACAACTTATGGGTCATTCGCCAACAGTTCATATGCTTTCATATTCT
TTGGACGTTGGCCTGATAACGCCGGACACAGGTGTGGCAGACTTGGGATG
AAACTTGCAAGTGTTGGCTCTTATGACGAATTCAAATACATAAATTCATT
TATGACCATGACCTCGGATTACTACTGGTTAGATTACCAAAAGCCTAACG
GTACAACACAATGGAAATGGGGAAATGGAGAACTTTTTCAACCAGAATGG
TGCGAAAGAGTCAATGGAGCACAACACAGTTTGATTGGAGATTTTTATGG
GCATGTTTATCGACCCAAAATGTGCATGGATTATTCATATGGATCGTCTG
ACAATTTTGTTTGTGAGAAAGAGAACGACTTGCAATCGACCGTCTTCTGA
ATGGTGTTTAGCCAATTCCTAAAGATTCTAATGATTCAACTTTTGCTGGT
ATCAAAAGTGAAGTCTAACGATCCACAACCAACAACGCGTGCGCCGCAAA
ccgccaccaccaccaccaccaccacaacCACAACCACAACCACCAACACC
ACGACCAAAGCACCAGATTTAAACCTAAAGGTCACAAGCCAAAAGACCAG
CCTATCATACCTACGCGACGCAGAATCGTTCAGTGGaaccaaaatcaaaa
tggtagctggtGTTTACATGGTAACTGAATGTGTCTTGTTATGCGAGAAA
GATGAGAGCTGTGATTTCTCTGTTTTTGAAGACATCCACCACAATTGCAC
TTTATACTCAATGAGGGATGACAacaaaactacagaccagaTAGAAGAGA
CATTGGTTAGCCAAACTGCAGACCCAGACATGGACCAAataggttttcaa
aaaaatgaacgGCCATCATGTAAAAGGATTGCATTCAAGACACGAGAACA
CTCAAATCAATTCGACAAATCACCTCGAACCAGATCATGCATTGCGAAAT
ATGCTTACGAGACAAGAGGCTGCTACAATGCGTGTGGAAGCAAAACAGGG
TGGTGCAGCGATCATTGCGGGGCGGGAGGGGCGTGTTGTAGATATGGAAT
ATCCGAAGAGGGCATGGATAGGGAATGTGTTTTATCGAACGTTGATTGGT
GTAGGGGCTATCACTGTTGCTCTCCAGGAACAACTTATGGGTCATTCGCC
AACAGTTCATATGCTTTCATATTCTTTGGACGTTGGCCTGATAACGCCGG
ACACAGGTGTGGCAGACTTGGGATGAAACTTGCAAGTGTTGGCTCTTATG
ACGAATTCAAATACATAAATTCATTTATGACCATGACCTCGGATTACTAC
TGGTTAGATTACCAAAAGCCTAACGGTACAACACAATGGAAATGGGGAAA
TGGAGAACTTTTTCAACCAGAATGGTGCGAAAGAGTCAATGGAGCACAAC
ACAGTTTGATTGGAGATTTTTATGGGCATGTTTATCGACCCAAAATGTGC
ATGGATTATTCATATGGATCGTCTGACAATTTTGTTTGTGAGAAAGAGAA
CGACTTGCAATCGACCGTCTTCTGAATGGTGTTTAGCCAATTCCTAAAGA
TTCTAATGATTCAACTTTTGCTGGTATCAAAAGTGAAGTCTAACGATCCA
CAACCAACAACGCGTGCGCCGCAAAccgccaccaccaccaccaccaccac
aacCACAACCACAACCACCAACACCACGACCAAAGCACCAGATTTAAACC
TAAAGGTCACAAGCCAAAAGACCAGCCTATCATACCTACGCGACGCAGAA
TCGTTCAGTGGaaccaaaatcaaaatggtagctggtGTTTACATGGTAAC
TGAATGTGTCTTGTTATGCGAGAAAGATGAGAGCTGTGATTTCTCTGTTT
TTGAAGACATCCACCACAATTGCACTTTATACTCAATGAGGGATGACAac
aaaactacagaccagaTAGAAGAGACATTGGTTAGCCAAACTGCAGACCC
AGACATGGACCAAataggttttcaaaaaaatgaacgGCCATCATGTAAAA
GGATTGCATTCAAGACACGAGAACACTCAAATCAATTCGACAAATCACCT
CGAACCAGATCATGCATTGCGAAATATGCTTACGAGACAAGAGGCTGCTA
CAATGCGTGTGGAAGCAAAACAGGGTGGTGCAGCGATCATTGCGGGGCGG
GAGGGGCGTGTTGTAGATATGGAATATCCGAAGAGGGCATGGATAGGGAA
TGTGTTTTATCGAACGTTGATTGGTGTAGGGGCTATCACTGTTGCTCTCC
AGGAACAACTTATGGGTCATTCGCCAACAGTTCATATGCTTTCATATTCT
TTGGACGTTGGCCTGATAACGCCGGACACAGGTGTGGCAGACTTGGGATG
AAACTTGCAAGTGTTGGCTCTTATGACGAATTCAAATACATAAATTCATT
TATGACCATGACCTCGGATTACTACTGGTTAGATTACCAAAAGCCTAACG
GTACAACACAATGGAAATGGGGAAATGGAGAACTTTTTCAACCAGAATGG
TGCGAAAGAGTCAATGGAGCACAACACAGTTTGATTGGAGATTTTTATGG
GCATGTTTATCGACCCAAAATGTGCATGGATTATTCATATGGATCGTCTG
ACAATTTTGTTTGTGAGAAAGAGAACGACTTGCAATCGACCGTCTTCTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036817XLOC_036817Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058429-proteinTCONS_00058429-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058429-exon-scaffold_311-1491911889:144469..144705TCONS_00058429-exon-scaffold_311-1491911889:144469..144705Clytia hemisphaericaexon
TCONS_00058429-exon-scaffold_311-1510915933:144469..144705TCONS_00058429-exon-scaffold_311-1510915933:144469..144705Clytia hemisphaericaexon
TCONS_00058429-exon-scaffold_311-1575043694:144469..144705TCONS_00058429-exon-scaffold_311-1575043694:144469..144705Clytia hemisphaericaexon
TCONS_00058429-exon-scaffold_311-1491911889:148174..148627TCONS_00058429-exon-scaffold_311-1491911889:148174..148627Clytia hemisphaericaexon
TCONS_00058429-exon-scaffold_311-1510915933:148174..148627TCONS_00058429-exon-scaffold_311-1510915933:148174..148627Clytia hemisphaericaexon
TCONS_00058429-exon-scaffold_311-1575043694:148174..148627TCONS_00058429-exon-scaffold_311-1575043694:148174..148627Clytia hemisphaericaexon
TCONS_00058429-exon-scaffold_311-1491911889:150829..151084TCONS_00058429-exon-scaffold_311-1491911889:150829..151084Clytia hemisphaericaexon
TCONS_00058429-exon-scaffold_311-1510915933:150829..151084TCONS_00058429-exon-scaffold_311-1510915933:150829..151084Clytia hemisphaericaexon
TCONS_00058429-exon-scaffold_311-1575043694:150829..151084TCONS_00058429-exon-scaffold_311-1575043694:150829..151084Clytia hemisphaericaexon
TCONS_00058429-exon-scaffold_311-1491911889:152077..152233TCONS_00058429-exon-scaffold_311-1491911889:152077..152233Clytia hemisphaericaexon
TCONS_00058429-exon-scaffold_311-1510915933:152077..152233TCONS_00058429-exon-scaffold_311-1510915933:152077..152233Clytia hemisphaericaexon
TCONS_00058429-exon-scaffold_311-1575043694:152077..152233TCONS_00058429-exon-scaffold_311-1575043694:152077..152233Clytia hemisphaericaexon
TCONS_00058429-exon-scaffold_311-1491911889:154650..154727TCONS_00058429-exon-scaffold_311-1491911889:154650..154727Clytia hemisphaericaexon
TCONS_00058429-exon-scaffold_311-1510915933:154650..154727TCONS_00058429-exon-scaffold_311-1510915933:154650..154727Clytia hemisphaericaexon
TCONS_00058429-exon-scaffold_311-1575043694:154650..154727TCONS_00058429-exon-scaffold_311-1575043694:154650..154727Clytia hemisphaericaexon
TCONS_00058429-exon-scaffold_311-1491911889:158149..158776TCONS_00058429-exon-scaffold_311-1491911889:158149..158776Clytia hemisphaericaexon
TCONS_00058429-exon-scaffold_311-1510915933:158149..158776TCONS_00058429-exon-scaffold_311-1510915933:158149..158776Clytia hemisphaericaexon
TCONS_00058429-exon-scaffold_311-1575043694:158149..158776TCONS_00058429-exon-scaffold_311-1575043694:158149..158776Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_311supercontigscaffold_311:144469..158776 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.0216092	0	0.0245607	0.0896509	0.0472289	0.370368	0.346734	0.299333	0.138782	0.426565	0.118224	0.368444	0.198969	0.0251661	0.0405106	0.865032	0.733175	0.0706689	0.0492999	2.14539	1.66501	0.508158	1.20117	4.18738	4.56525	0.0608849	0	0.0245956	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001304C-type_lectin-like
IPR016186C-type_lectin-like/link
IPR016187CTDL_fold
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00058429 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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