TCONS_00058490 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058490
Unique NameTCONS_00058490
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1755

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058490 ID=TCONS_00058490|Name=TCONS_00058490|organism=Clytia hemisphaerica|type=transcript|length=1755bp
TACAGagaacaaaaataataatacaaatcatataaaaattataacaacac
acaaaacacaaaaatctGATTGTAAATCGATAAGatctttgaactttttt
tttctgagTGAGAGAGAAAACaagaaaatccataatggcagatagtTGTA
GTAATTCGTCTGTTGGCTCACCGTACGCAAGCAGTACTGACCTTCGTGGT
GAGGATAGTGAAGAAATTATGGAGCGTGGACGACGCCGATCACGCAATCT
TGGCTCCACAAGCAGCCGCAGAGCAGTCGGTGGACTGGACCTAGAGGACG
TCGAAAATACAGTTCGTGGAATGCAACAAGATTATAATGACATGAAAACA
GAATTTACTGGTATTCGTAATCAATCGCAATCACAAAAACGTCGCATTCT
CGATCTTGAAAACCAATTCGAAGATGCTCGAGTACGAATCGATAAACTTT
TACAACGAAAATCGATTCGTCGAAATACATACGATTCGGTATCGAATTCT
TCATCGTTCGTGACTCCTTCAGCTTCGTTTACATCGGAACGATCTTCGCA
TTCATCAAAAATGAACATCGATAGAAGCGATTCAATGGATTCGACGTCCT
CAACAGAATTACACAAAACACAAATCAACATCAATCCAGCGAATAATACT
AAACAAACTTTCGGTACTGTTACACTTACAGTAAAAGTTGATGAAGATTA
ACGGGaatcgattgattgattgattgattgattgattgattgattgattg
attgattgattgattgattgattgattgattgattgattgattgattgat
tgattgattgattgattgattgaatgattgattgaatgattgaatgattg
aatgattgaatgattgaatgattgaatgattgattgaatgattgaatgat
tgaatgattgattgaatgattgattgattgattgattgatctgTTGACAA
TGAAGGATCAGAGGGTAATGGTTCAAAATGTAATGTTTATTCTTTTTCAC
GATATTACAAATATTACTAACCTCGAATTCGTAAGGGACTGAAAAATCTA
TTTgcaaaaaagtgacaaaattggTACAGATCTTTCGAAATTTAGTATCT
GATATTTCCCTCTCTTATCCATTTCTACCTACGACTAcatataccttatt
acacgaatatcaCTATTTACTATTTTATTACCacggattgaaaaatttcg
tgttaataaaaatccccttaattaaaaccagtcATGGTGTcagtccttga
aaaagcaataaaattcgtgttaatttttggagtgttaatttcaaggccgt
tgaatacttgcctagtaatattcgtgtaacgTGTAATAGGTATTATCCTC
AATTTTCTAATTAAAATCAAGCGATCTTCCAAAAGTGCTGCATTATTGCA
AAGTATCATGAAAATGTATAAAAGGGCATATTTTGTACTCTCCATTTCGA
TTACTATATAATATTTAAATGGTTGTTAAAATCATCCAAAGACCCAGAAC
AACCTGGAAAATGTCTACCCAGTgagaatttcaacgtaacttGTTTAATG
TATATTATAAATTTTCTAGGGATTATTTTTCATGGATTATTTTTCTTGTG
ATTATTATAATTAACAAAATTTCcccgtttctttttttttcgctcATGTT
GTACAATGTTTAGAATTTATATAAGAGAAACTTACGGTTTATATAAAAAT
AGGTTATAGGGTtttttaaacgaaaaaaaattgttttgttctttatttat
gaaat
Run BLAST on NCBI

protein sequence of TCONS_00058490-protein

>TCONS_00058490-protein ID=TCONS_00058490-protein|Name=TCONS_00058490-protein|organism=Clytia hemisphaerica|type=polypeptide|length=188bp
MADSCSNSSVGSPYASSTDLRGEDSEEIMERGRRRSRNLGSTSSRRAVGG
LDLEDVENTVRGMQQDYNDMKTEFTGIRNQSQSQKRRILDLENQFEDARV
RIDKLLQRKSIRRNTYDSVSNSSSFVTPSASFTSERSSHSSKMNIDRSDS
MDSTSSTELHKTQININPANNTKQTFGTVTLTVKVDED
Run BLAST on NCBI

transcript from alignment at scaffold_311:1197463..1206780+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058490 ID=TCONS_00058490|Name=TCONS_00058490|organism=Clytia hemisphaerica|type=transcript|length=9318bp|location=Sequence derived from alignment at scaffold_311:1197463..1206780+ (Clytia hemisphaerica)
TACAGagaacaaaaataataatacaaatcatataaaaattataacaacac acaaaacacaaaaatctGATTGTAAATCGATAAGatctttgaactttttt tttctgagTGAGAGAGAAAACaagaaaatccataatggcagatagtTGTA GTAATTCGTCTGTTGGCTCACCGTACGCAAGCAGTACTGACCTTCGTGGT GAGGATAGTGAAGAAATTATGGAGCGTGGACGACGCCGATCACGCAATCT TGGCTCCACAAGCAGCCGCAGAGCAGTCGGTGGACTGGACCTAGAGGACG TCGAAAATACAGTTCGTGGAATGCAACAAGATTATAATGACATGAAAACA GAATTTGTAAGTCATaccaattattttattttcaaatgtcATTTCCGGAT TGAGATTTTCGGTCTTAcaacagtcaactctctctaattcgaatctctat tattcgaatcatTCTGtgattcgaactaaaatattggtcctctcACCTGA AAggtggtttaaattactctctgtaattcgaacatttCTCTAAGTCGAAT AAAAtatttggtcccttgaagatcgaattagagagagtcaactgtaggtT TGTTTTTTGTAAGTCATCCATTTTGCCTCGCTGGGCTGGTAAGAAGATAT TGGATCTTTAACCATTTCGAATGAAGTTTTAAGGAGACAAATACCAATGT GGATAGAGAATGCTTTGAATAGCTTTAAATCAACACACCTAGAAAATAAT AATAGTACAAATGGCAAATTTTCCTCAACAGAAACTTGAAAATTAGATTG AATCGTGAATtatatttcaaagttttctcctaatgtaaaagattttattt tgtgattttttctaATGAGCAGAGGATTGCTAATGATTTTAAACTTCACT GTCTTCTAGGGCTTTTTATGCATAGGTCGAAGAAACGATCTCTTATCAAA CTTTTAATCTCGTTCTATAACcttgattatttttttaccgAGAATTTCCG AATCTTGGAACTTTCAAACGTGTTATAGGCTTCGTTTCTTCTTTCTGCAC ACTAAAACACAACATCCAATGTCAAATTCAAATTAGCAGTCTCAAACTCA AGTTGAGACTTTCGAAagcgaaattttttgtcaataataaATTTAAACCA ACCACGGTGCTTTCTTTCGCTGCTGTAAATTAGACTGAACTCTTCAGGAC CAAAAGAAAAAACGCTGGGTTTTTTTTACAACTCGATATCTAATTCTTTG TGGAAGTATcgtatggcgcgccaaaaggctttttaataccaacttttttt tataataccaacttttttttataataccaacttttttttataataccaat ttttcttataatatcaacttttttttataataccaactttttttattata ataccaactttttttattataataccaactttttttttatagtaccaact ttttttttagttcgaagttttttcaataaCACCAATTTTTGTCTCGCTTA CTATGCATGTATAATCGATCAAATGTAGAAGGAGTCTTAGCGCGATTACA CCTAGCCTGGAGGCCACTTAAggttttttgatagactggatgacaCGATT ctctaattcatgatatgcaccactcaAACCACTGGAGTCTTccgagaatt ttcaaaatattcaacccaatacgtcacttaaacaatagaaaaagtgacgt attgggttgaaTATTTCTGAAAATGTAGGAAGACTCGCCAGTGGTCGGCC AGTGGTGcacacagatctgtaaagcccgaagggctagatttgcggctttt atcaaaaagtgaagcttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNagtgaaagttggtattataaaaaaatgttagtatta taaaaaaaagttgatattataaaaaaaagttagtattaaaaagccttttg gcgcgccatagtaTCGTTCGTGATTCTTCTTTGAGAAACCCTGTCTCAGT CATCATTACGTTTGTCAGCAAATGGGTTTCACATTAAGACTTTTTATCGT TCTTTCCCATTGCAACTTCTTATTAAGATTAATATTCAATTATAGTCAAT CATTCTAGTTTTGATGGCTAAAGCCGATACAACCGCTCATATTTCATCAA TCTGCAAATTGATTAGTCTAATTTGCAAGTGCTTATCTATAGAGAAATAA CTTAGTCTAATTATCACTTGCGATTAGCATACATTAAATAACCTTTTCTT CACTAACTTGCGACATTGCAAGCTAAATAAAACCCTCGTCTTTTATCATT CATGACTTTAATGCCAATTTTGAAGTCACTTAATAAAGCAGTATTTTGTT GTGGATTCTGCTTCTTGGCTCTTCATCTTTCTTCAGTACGGTAAATTTCG AGGCTAGCTTATTATTTTTTACCCTTATTACTACCGCCGTTTTTGGTTAA AATTCCATTTCCCGCACTAATATTCCACTTGCCACTCCCTagcttaaaaa taatttatgggcagttattgaaaaacggatgaacatggtcttagtgaAAT CCTAATCCGGGAAGTGGAATCTTGTGTTCTAAGCGAAAAGTCTTTCATTG TATATAAAAATGTTGATCCAAagaatggtaaaaaaaaattatactttgAT ATTGTACCAAAAACAGAAATTATTGTCTGTCTGAGAAAATACTATCTTAT CATGATCAAAAGTGGTTGCActtaagaaatgaaaaaattatatcaaaatt cCATACATTCTTTTCTCCTCCTTCATAATAATAATGCATCACCTCATAAC ACTCACCCTATAATTTCTGTTGGTTTCACTCTATCACCAACCCAACATAT TTCATTGCGGCTAATATAGAAAACTATTTTCTGATCAAATTACGCCTATT TTCTCTACTGTCTACCTATTCTTTTTTATCATCTCCTAGTTCTAGGCCAT ATTGTCCTCTACAAGGAGGGATCACTAATAATGTGCTCATTCTGACCAAA AATGAATTTTCCATTCTTCCTTGAAATTTATTTCAGCCCTATTTAGTTAA ATGCCTGCCTTAACCTCCACTCTATTTGTGTTACCTCCCAAATCAGCCTA GATAGATGACTAATGATGCTTTTGTCCTAGCATTTTTGTGATTACTTCAT TAACAGTATATCGGGTGTTTCAAAAATGCCCCTTTCACCGGTATATTTTG cgtaatataatatatattctaagtaatttttttttactttaaaaatctta tatataccgtttagaggggtgaaataagggtaaAAAGTCGAAAGTTtcct tcgtcgcccaaccatggtaggcgacatatttttttggcccccttAATTCA ATTCGCACGCCGGGGCCATGTTTCGGTTTTGCAGTTAACTTTAACTTCAT AAGTATAACTTGACTTTATAGAAGCATTAGAATTTCAAAGGTTATTTCCT AAAATTTCAGAGATAACTTTCCCATTAAGAGTAATTCTGAGTTGAAGAAA GATTTAGATTGCAATGTCTTTTCTTCCTTTCCTGTTCGACTCTTCCCCAT GCGATTTAAATAACAGTACTCTTCCCAGATTTTTTGGGATATTTAGGGTT GGCGTTAAGTGCATACTGAAGGCTCTATGTAATCGGGAAAAAAACAAAGC TTCGTTTTTTCGATTACTCCATTGGCTGGTGTTGTAATACACTATGAGCT CAAATCTTCTTTACTTTAGTGTGTCTCAGGTACCGTAGTATTGTGAAAGG AGAGACTAGACTAAGTTGTTAATAATTTCTTTTATGAAAACAAGGCTTCG TTTTTTCGATTACTCCATTGGCTGGTGTCATAGCTGGTCATAGCTTTACT GTGTCATCAGGTTCATATTCTCGATGAAAGAGAGACTAGACTATAAGATG TTACTACTTTCTTTTGTGGgcaatttttctctatttctctTAGGCCTGCT AATACAATTAACCAATACAGTCAGTAAACATATCAAATGCTTCAGCAAAT AGAAGGATACTACTGAATCAACATTTGAGCAAGAAAGATCGCTCTCCTAA TAAAGATCCGAGTCATTGTTTTGTGTCGAAGTACCTTATTTGTACTTGTT ACCAAACATTTTGCAATGATTGACCAATGATTTTGGTCATCtaacataaa tttgtttgaattttgggttcaatttcaatcaatccaTAGATTTTTACGGA TTTACACTTTGAGACGATAGTCAGTGTCACGAAGTCAATTGATGACCAAA GactaaatttataagaacatcaaggaTAGAAGCTCGGGACAAGAAAAAGA CTTGTTTTTTTCTTAGTAGAGAAACTGTCTAATAATTTACATCTGGAGGC AAAGTGAAATCGTTTTTCCctactttattttgatttatatGAAAGAAATT TGGAAACCAGGGGCTAATTCAAGTGCCTACAAAAAGAGCTGTAATATTCA TGTTGTCCATACAGACACTAATGTTTTAAGTGACGAAAGACTCGTCGTAA AGACGAAAATGATTTATCATATGTGACTAGAGACACCACcttatatggtc aaaattttcaaatctctTAATGATAGAAACCAGTCCATTTACCATAATGT AATATGCATTCTTTATCATAAGAGCTAATTATACGTCAAGAAAAATAGTT CTTTACCACACGTAACACCAACaaacagaatttaaaaaaatacaaaagac aTTTATATAATCTACGTATAAACAATCTATTCATTGGTTCGTATAGTAAG TCGAGGAGGAGGTATTTCAATCGATCGTTTTACAGTAATAGTACTAAACC CTTTTTGAAACCACTTGTGGTGGAGTGAGAGAGATTCATCTTatcttttt gttgattttctgagTTGAtttattttgtgactttttaccagaaaaaaagt ttttattttattttggaaagaGGAATTCATAATGGCAGTTGTTCAAGCAC CGCTCGCTTTGCTGCAATACAATCGAGATGATGAGCAATCAATACTGGTA AATAATCGAGTTTTGTTTTTTGGATCCTTTTCTTTAGTTTCAGTTTATGT ATCGTCTTGGTCATTCGATAATGTACCAGCTTTGAAAGAAGAGGGTCTAT AATATTAAGAATATATCCGAAAATAGTATAGCATGCAAAGCTctcctttt gtattttctttccCAAGCATCCTCCTTACTGGCGTTGGGGatattatttt aatgaatttttctaTTATGCAAAGTTTTTGGTTCAGCCATTGAATATGCA TTTAGTGGTTTAGTGCAATTTGtatgaaatttttcttaataAAAGTCAAA TCCAGTTATgttcgttttcattttttattgaacaaaacttttaaagaatt CTTTTAGCACACTGACGATTTCATTCATCAGTTCTATCACCATCTAATGT GAACCCAGAATGTTTTCAAGTTGGGAGGAGGGAAGGGAAATAGAATAAAT GTAGCCTATAATCAAAATAATTGTCATATATCCCTCATTCGTTTTAATTG AACTCAATATCTGATCGTCCAAAATGGTACCTTTGAAACGCGGCAGCACT TATTACCAAAACCCTTTTATTAACCTATGATTGGTCCAAGTTTACTTTTG ATGCTTCACTTGTAGTCTTGTTATATCCAAGCAAGGTCTTCATTTATGAT ATTCATTCATTCCGATTTCTGAAGTATTTGCAAATTTAAGCTAGAAATAA GCTGTCTAAAGTTTATCATTTCTGGCAAAAACCGGAGTCTTTCCATAGAA AACTTTTcgtaatgaatatcatgaattcaatCCGTGTTCAAGTAGTTCAA GTACCTCATTTTTAAGGACTGACACACCTGAGCACAGGTCGGAGGAGTGA TTCTGATACTAATAATTCGGGGAATCGAAAATGccttaaaaattaacatt tctCCATAGAAGGTTAAggttacttttttcttttcgcGTGATTCTGCAAT ACCACTATCATTGCATCgaacaaaaatgacaaaaaaatgttttccttgGC TGACATGAACTGTGTATATAACAGAGTTATGTAATGGGCGAAAACGAAAa tacgaaaattttgaaagtataCTAACTAATGGTTgtatttgaataatttt tttttctgccgACTTCCTTTTTAACGGCGCCAAGTCTGTTGTATCAGTAG AATGAAACCATGCAAATTCCTACATACTCTCTTTTTTATATACAAGCATA CCTTTAGCTCATACTTTGGCTCAAATtcggtaaaaaataagcataaatgc taagcataccttttctaaaacgctgacctttttagggttacttttaaagc tatttgagctttcttAGACCAAGTCTACgcatataaataagcataaattt aggctgaaaatgaaattttgctaagcatattgagcctcgacccgattttt ccgtatgcttataaataaaaaagagtgtattttaTTGCCTTCAATAGAGA GTTAGATAAAAAGAGATTTCCTTCTCAACACAAATTTGTTGTGTTTTATG GTTCCttcttaagattttatttccatCTACCTGATTATCCAGTTATCATC CGTGTGGATTAAATTATCATAACcgaatttatttttgctttctttgtttA TCTATAACCGATCTACTACATTCCTTCTCCTTAatccttttaatgatttt tgaggatttttgaaagaatttctgtgcaagtttaaaagattttgttacAA AATATATTAAAAGAACGCTGTCCTCAATACTACGTATTTGGGGGCGAGGT TGAGAGGAtaccttttattttgaaagtttgtttATCTGTGAGCCCGATGG AACAcctatattttcaattaaaaattacTCTTGGTTTCTACAGccttatt ttaatattttattaagAAAAGAGGGTGCAGCATATTGTCTCAAAAACAGA GTGATTTAGCCTAAAAATTGTCTCGTTGACACATCAACGCTTGCATCTCT TCCTTACTCTTCTTTGCTATGTATGTACTAGAGTGTATGAATGATGGAAA AGCCTAAACTAACTAAAGACGAGACTAAAGATACAATTTCTATAGTTTGA CTCGCTAATGCTTGAGCTAAGTGcctgaattttaaaattgtcTCTGCCCC GATTAAAAATCGAGTTAAAAGTTCTAACACCGGtgagttttcaaaatcaa agtcGGTTAAATAGATATTTTAAAAACTCCACAAAGTCATTGAGACCATG GTATGGATTGAGATGAGTTGGGTTGCAAGGTGATCAAAAATATGATAGCT ATGTCTTAACTTTATGACGGttgaaacagaaaaaaaaatagattaaaTGT TTTATATTTACATCTTCAGACTGGTATTCGTAATCAATCGCAATCACAAA AACGTCGCATTCTCGATCTTGAAAACCAATTCGAAGATGCTCGAGTACGA ATCGATAAACTTTTACAACGAAAATCGATTCGTCGAAATACATACGATTC GGTATCGAATTCTTCATCGTTCGTGACTCCTTCAGCTTCGTTTACATCGG AACGATCTTCGCATTCATCAAAAATGAACATCGATAGAAGCGATTCAATG GATTCGACGTCCTCAACAGAATTACACAAAACACAAATCAACATCAATCC AGCGAATAATACTAAACAAACTTTCGGTACTGTTACACTTACAGTAAAAG TTGATGAAGATTAACGGGaatcgattgattgattgattgattgattgatt gattgattgattgattgattgattgattgattgattgattgattgattga ttgattgattgattgattgattgattgattgattgaatgattgattgaat gattgaatgattgaatgattgaatgattgaatgattgaatgattgattga atgattgaatgattgaatgattgattgaatgattgattgattgattgatt gatctgTTGACAATGAAGGATCAGAGGGTAATGGTTCAAAATGTAATGTT TATTCTTTTTCACGATATTACAAATATTACTAACCTCGAATTCGTAAGGG ACTGAAAAATCTATTTgcaaaaaagtgacaaaattggTACAGATCTTTCG AAATTTAGTATCTGATATTTCCCTCTCTTATCCATTTCTACCTACGACTA catataccttattacacgaatatcaCTATTTACTATTTTATTACCacgga ttgaaaaatttcgtgttaataaaaatccccttaattaaaaccagtcATGG TGTcagtccttgaaaaagcaataaaattcgtgttaatttttggagtgtta atttcaaggccgttgaatacttgcctagtaatattcgtgtaacgTGTAAT AGGTATTATCCTCAATTTTCTAATTAAAATCAAGCGATCTTCCAAAAGTG CTGCATTATTGCAAAGTATCATGAAAATGTATAAAAGGGCATATTTTGTA CTCTCCATTTCGATTACTATATAATATTTAAATGGTTGTTAAAATCATCC AAAGACCCAGAACAACCTGGAAAATGTCTACCCAGTgagaatttcaacgt aacttGTTTAATGTATATTATAAATTTTCTAGGGATTATTTTTCATGGAT TATTTTTCTTGTGATTATTATAATTAACAAAATTTCcccgtttctttttt tttcgctcATGTTGTACAATGTTTAGAATTTATATAAGAGAAACTTACGG TTTATATAAAAATAGGTTATAGGGTtttttaaacgaaaaaaaattgtttt gttctttatttatgaaat

Coding sequence (CDS) from alignment at scaffold_311:1197463..1206780+

>TCONS_00058490 ID=TCONS_00058490|Name=TCONS_00058490|organism=Clytia hemisphaerica|type=CDS|length=1134bp|location=Sequence derived from alignment at scaffold_311:1197463..1206780+ (Clytia hemisphaerica)
atggcagatagtTGTAGTAATTCGTCTGTTGGCTCACCGTACGCAAGCAG
TACTGACCTTCGTGGTGAGGATAGTGAAGAAATTATGGAGCGTGGACGAC
GCCGATCACGCAATCTTGGCTCCACAAGCAGCCGCAGAGCAGTCGGTGGA
CTGGACCTAGAGGACGTCGAAAATACAGTTCGTGGAATGCAACAAGATTA
TAATGACATGAAAACAGAATTTACTGGTATTCGTAATCAATCGCAATCAC
AAAAACGTCGCATTCTCGATCTTGAAAACCAATTCGAAGATGCTCGAGTA
CGAATCGATAAACTTTTACAACGAAAATCGATTCGTCGAAATACATACGA
TTCGGTATCGAATTCTTCATCGTTCGTGACTCCTTCAGCTTCGTTTACAT
CGGAACGATCTTCGCATTCATCAAAAATGAACATCGATAGAAGCGATTCA
ATGGATTCGACGTCCTCAACAGAATTACACAAAACACAAATCAACATCAA
TCCAGCGAATAATACTAAACAAACTTTCGGTACTGTTACACTTACAGTAA
AAGTTGATGAAGATTAAatggcagatagtTGTAGTAATTCGTCTGTTGGC
TCACCGTACGCAAGCAGTACTGACCTTCGTGGTGAGGATAGTGAAGAAAT
TATGGAGCGTGGACGACGCCGATCACGCAATCTTGGCTCCACAAGCAGCC
GCAGAGCAGTCGGTGGACTGGACCTAGAGGACGTCGAAAATACAGTTCGT
GGAATGCAACAAGATTATAATGACATGAAAACAGAATTTACTGGTATTCG
TAATCAATCGCAATCACAAAAACGTCGCATTCTCGATCTTGAAAACCAAT
TCGAAGATGCTCGAGTACGAATCGATAAACTTTTACAACGAAAATCGATT
CGTCGAAATACATACGATTCGGTATCGAATTCTTCATCGTTCGTGACTCC
TTCAGCTTCGTTTACATCGGAACGATCTTCGCATTCATCAAAAATGAACA
TCGATAGAAGCGATTCAATGGATTCGACGTCCTCAACAGAATTACACAAA
ACACAAATCAACATCAATCCAGCGAATAATACTAAACAAACTTTCGGTAC
TGTTACACTTACAGTAAAAGTTGATGAAGATTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036850XLOC_036850Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058490-proteinTCONS_00058490-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058490-exon-scaffold_311-1491911889:1197463..1197818TCONS_00058490-exon-scaffold_311-1491911889:1197463..1197818Clytia hemisphaericaexon
TCONS_00058490-exon-scaffold_311-1510915933:1197463..1197818TCONS_00058490-exon-scaffold_311-1510915933:1197463..1197818Clytia hemisphaericaexon
TCONS_00058490-exon-scaffold_311-1575043694:1197463..1197818TCONS_00058490-exon-scaffold_311-1575043694:1197463..1197818Clytia hemisphaericaexon
TCONS_00058490-exon-scaffold_311-1491911889:1205382..1206780TCONS_00058490-exon-scaffold_311-1491911889:1205382..1206780Clytia hemisphaericaexon
TCONS_00058490-exon-scaffold_311-1510915933:1205382..1206780TCONS_00058490-exon-scaffold_311-1510915933:1205382..1206780Clytia hemisphaericaexon
TCONS_00058490-exon-scaffold_311-1575043694:1205382..1206780TCONS_00058490-exon-scaffold_311-1575043694:1205382..1206780Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_311supercontigscaffold_311:1197463..1206780 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
45.8011 42.9356 34.2823 35.7586 5.49366 4.15114 18.6447 18.6749 20.042 17.6685 16.1349 11.9134 11.0592 9.21345 11.1029 13.7886 21.5603 22.0293 6.90942 8.67337 37.2526 32.0565 47.2066 48.7941 32.8063 28.7346 60.2306 58.9076 20.8277 23.3367
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00058490 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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