TCONS_00058499 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058499
Unique NameTCONS_00058499
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length820

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058499 ID=TCONS_00058499|Name=TCONS_00058499|organism=Clytia hemisphaerica|type=transcript|length=820bp
tttttagaaaGTAATATTAACAGTGATACCACCATCAAAATATTAAACAA
AGCAACTGAGTTATCATgggaaaaatcaataaaaacatcTCGATAAAACC
TTTCCGAAGACAACAGAACCATCCAACGAAGAAAACACAAGGCACTGATa
aGACTAAAGTGGCCCTATCGTCAGCCGCTTTaaacaaaggaaaaacaaag
aaagcaaaaCGCGATCTGAAGAAATGCACTCTAATCAATAAATTAAAAAA
GTCTGGCGAAGCGAAAGAGAAAATCCAACGTGCCAAACAGAAAGCGCAGA
CACCTGTCGTAGGTAATATGGATCCTCTGTTAGACGCTTTGTCAGCCATT
GTGGACGAAAGTGGTATTAATTTGAATGCAAGTGAACATGAAACGCATCA
GAAGAAGACAAAGAAAGCCAAAGGACACAGgGCCGCAGGGAACACGCAGA
ATATCAAACGCAAGAATAAGCATCCTTCAGAAAAAGCTAGATATCATTCT
AATATGCGAGATATGGAGATCTTTCAACGGGTAACGACACATCCAAAGTT
CACTGGCAATCCTGTCAATGCTATTTCTGAACATGTTAAATATCTCATGC
AACAAGAAGAAGATGGTGTGGAAACATGATCCAATACTGGTGATTTAAAG
GTacaaccatagatttataaagcccatagggctagatgtcgtgcttcggc
tgaaaagtgtgccgttgttaggtaggaaatcctacctaggtcacatGACA
TAACagtcagaagcttcgcgggttttcgaaaacaatggcaacaatatttt
ttccgatactcatttttttt
Run BLAST on NCBI

protein sequence of TCONS_00058499-protein

>TCONS_00058499-protein ID=TCONS_00058499-protein|Name=TCONS_00058499-protein|organism=Clytia hemisphaerica|type=polypeptide|length=187bp
MGKINKNISIKPFRRQQNHPTKKTQGTDKTKVALSSAALNKGKTKKAKRD
LKKCTLINKLKKSGEAKEKIQRAKQKAQTPVVGNMDPLLDALSAIVDESG
INLNASEHETHQKKTKKAKGHRAAGNTQNIKRKNKHPSEKARYHSNMRDM
EIFQRVTTHPKFTGNPVNAISEHVKYLMQQEEDGVET
Run BLAST on NCBI

transcript from alignment at scaffold_311:1276660..1293660+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058499 ID=TCONS_00058499|Name=TCONS_00058499|organism=Clytia hemisphaerica|type=transcript|length=17001bp|location=Sequence derived from alignment at scaffold_311:1276660..1293660+ (Clytia hemisphaerica)
tttttagaaaGTAATATTAACAGTGATACCACCATCAAAATATTAAACAA
AGCAACTGAGTTATCATgggaaaaatcaataaaaacatcTCGATAAAACC
TTTCCGAAGACAACAGAACCATCCAACGAAGAAAACACAAGGCACTGATG
TATGtttgtatttttctattttattttatctagtAATCTTTTTATAGCTG
AGATATTTTCAACCGATTAAATTTCGAAACCTTCtcggccctttttacgt
cgGCCCTTATTCTTATTGGTGTTATTCTTTCGTCATCTTTCGACTTACGT
TGGAAAATTTGCGTAGCCTTTCTTCCACAATACACGATCTTGCATGACCG
TCTTTATTTCCTCAATCTCGAGACCTGTTTCCCTCTTCAGAGTATCCAGG
AAGGTTAACTTCCTTAATCTTACTAGACCCGTTTGTGgacgtaataaggg
ccggcgtgaGGGATCGGAATTGAATTAAGGCCggactaaaaatagaaaaa
attgtgcTTTGGCGTAATCAGGGCTGGcataaaaaaggagaaaaaggtAA
TAGGATCTCCCATATTCATAGTGGAAATTTATCTTGCAATGTTCATTACA
TTGCTACAGTTTTAggtataactcgaatgtcttctttAAACATGTTTTCT
TTTCCCTTCAGTAAACAAAGCCTTATAAttcttactccataactcgaaat
ttgtTCCCAtgcgggttcgagttatagagactacTGTATAacatatttta
aaataattttttcagaaGACTAAAGTGGCCCTATCGTCAGCCGCTTTaaa
caaaggaaaaacaaagaaagcaaaaCGCGATCTGAAGAAATGCACTCTAA
TCAATAGTAAGTCAAATTCAATTGCCTCCTTTTCAAGTCATAGATTGgtt
gaactcatgtaattcgaaaacTCAAGGTACCAAGAATTACACGACTTTCA
AACTAAATgagttttatgaaaatattttatttcccACAGGAttacttttg
aacaatttttgtgttttcgaGCTAGAATAATGAaatactaaagtctgttc
acgataagtgtgcactcttatTTCTTTTaactataacttttgaaggaatt
cttcgttctttataaatttggtatcgttggaaggatatttgtgagtggaa
cagtttgaagtaaaaaagtctttaaaaaaattctaaaaacgaagatgaaa
atgaagaagaaaaaaatgaagatcttgtagagaagtgctataactttcat
tttcactggaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNta
tttattcaatataaagttatgatacaaagttaatgagtgattgaccccaa
aaaacagcagaaaacagcgtttttagacgtcaatcagcttatagctttgt
ttgatatcttttgactaatgattatttttgagaatttttttcacagtgat
gacgttcgataatgaaggagtcacttcagtgaaaatgataactatagcac
ctttctataagatcttaatttttttcttcttcattttcatcttcattttc
agaattttttatagattttttgattccaaattgttccatcactaatatct
ttccaacgataccaaatttataaagattgaggaATTCCTTATGGGACCTG
AAAATCTGTTCGACTTAAATGACTTTTCGAATTACATGGGTTCGAATTAA
AAGAGTTTTCTTGTAAGGTTTTTAAGATAAATTCTGGGGGGACCACAGAA
TCTGTTCGAATTAAGTGAGTATCCAATTTTAGGAGTTTGAATTATATGAG
TTCAACAAAAGAATTGTAGACATTTATTTCCTGTCTATCCAGCTCTTAAA
GGAATGCTCAACCATTGGGTCTCTACTCTCGATCTCAAACACCACTTCAA
CAATGATTTTGGTgcgattgttttgattttgcaaacAGCACGCTCGTCTT
TAGAATTCAAAACCTGAGAAATTTAACAAATATGTTCGAAGTTATCATGA
TCTGCCCGGAGATAATTTCTTCTCAGGATTGCTAAAAACTACatagaaat
aaaaaactaaCCGGTGCCAATGTAAACTGCtgacatccactaacggattt
gtGCACCTTATTAATTAGACCTATACTCCCTGCGGTCCTGCAGAGGTCTC
TGATTCAGATTTGTGCTAATATCACTCTTTTTTCAAATAACAGAATTAAA
AAAGTCTGGCGAAGCGAAAGAGAAAATCCAACGTGCCAAACAGAAAGCGC
AGACACCTGTCGTAGGTAATATGGATCCTCTGTTAGACGCTTTGTCAGCC
ATTGTGGACGAAAGTGGTATTAATTTGAATGCAAGTGAACATGAAACGCA
TCAGAAGAAGACAAAGAAAGCCAAAGGACACAGGTTTGTTAAATTCATat
tcaaaatcttttatgtGGACTGAAAATTTTCGAGCGCAGATAGATTCTTT
AAGTTGAAAAATCGTTCAGAATTTTAGTCTTGATTTTGATGGAATTTTGC
TTCCCAAAAATTGGTAGTTCGCACATTTTGATATATCGCTCTTGAAGGAG
AAAAGATCTAATGAAAAGTGATACTTCGTtgtaaagataattttgagcat
ATTTTAGccctttaaaattaaaaaaaaggaaaaaaaaagatgaatgtGAA
GAAGGAGAAATGATACAGTCgagtctctctaattcgaacctttctctaaa
tcgaactaaaatatttgaTTCCCTTATCTGGCGAGGGGTATAAATTAATT
TTTGTGGcacgaatctttctctaattcgaagataACTTTTTGATCCTTTG
GAGATTGAATTCGACAGAGTCATCTGTATGTATTCAAATGTATTCATATT
TTCCATGGATCAGACAATACAGCTCTCCGAAGTGGGTCCATTTTGAATAG
AATCTAAGTACATATTATTTGAAATCAgctaaattcaattttttctaatA
CAATATTCTtttgatcttcatttttcaccctttttaacagattttaaagc
ATTGAAAAACTCTTAAGCTTAAAATTACCTTTCCAACGAGTTATGGCTTa
ttatacatttttattttcgagATCAATGTATAAAAATGTGCGGCAAATTT
TTTGGAATAGACATTGGCTTTGGCGAATTTGTGtcctaattttggtgttt
tacAGGGTAAAACTGAGCAAGCTAAATCATAATTATGCTTAGCAAGCAAC
AAAATGTCTTGGACTTTTACTAATATTCACTTCAGCCCAATTAGTTTGCG
GATTGTTTTTTTCAATTGCCAATGTCTCGTACCCTTTCCTTGCTGATGTC
GGTAAATGCCGTCATAGGCACTTTGTATTTATATGCCAATTACGGAATGA
CGGCATTTGCCGATATGAGCACTTCCAATTCCTTTGCCGTGGTTTTTTTA
TTGAACtttattgaaagttttaattttgaaaactcaaagtAAACACATAT
CACatatatttctgatatttttcagaaaataaagctaaatgtgattatta
ttatttattttctgtTGGTAACAAAATAGCTTCATATAAATACAAAACTA
ATAAAAACCAACACTagtaaaaactatttaaaaataaataaagtaataaa
aaattaaaaagtcaatGGAGATTATGCACAAATTTTGCAGGTACAATTTT
CACCCGACCAGCTTTGGagtttaattttgaaaagtttaggAGAATCGGCA
GCTTTGATTTCAGAAGGCAGGCAATTCCAAAGAAGACTACCTNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNCTGTTTAGTAGAGTTTCAAAGTCTGAAGAG
AAATCAAAATAGACTGCTCGCAACGCCCTCGCATGGACTTTGTTAATGAG
GGTATCGTTGCCTTTGCAGCCATTGTACACTCTATGATGTCTCATGCCGG
AATATGCTtacatctggcaaataggtcgaacttTCATTTTTTCCGTTGCA
AATAGGTCAAACTTTAAGAAAAAAGCGCGAcggttaaagggttaaacaat
tAAACCGCGATGCTTTTGTCGTGAAgcgaataaaaatgaaaatctgatTT
GGGATCTGACCCCAAATAGATTCATGGAAGGATCAATTTTCGGAGtaagt
tttcagtttttatttAAATAATCATATGGTCAAAGTTAAATAATTTTGGC
CTAATCTTCAGATAAGACCGATTGAATTTTGACACTAGCCGGGGATGACC
ACAATACTATTGGtgactaatgaaaacaatgatcATTGTGTGCACAGGCT
CCGAAAGGTCGGCGTCTCTATGGAGGGCCAAAGTGAATCTAACCATTTCT
AAAAACCACGAGCATTTTCCATGTCGGGGAAAATTCGCACAAAACAGAAA
TCATGTGTAAAATATTTATGAAAAGTGGAGAATCAATCGAAGCTGTGGTA
CTTTGATAATCTTCCAATTTTGAAATGCCATaaataatgtaaatttattg
tatATTATTGTATATTATTGATAGGAAtatcattcccttgagaacggacc
gagtccgaaacatgtcgggaaaaatcaaaatataatagccgcattctttt
tcatcgCTCAACATAATGTAAATTGTTTGTTAATGTTAGGTTTCTTTATT
GATCTAATAATAGTTCCATCAATAGAAACTGTCGTAACTTTAGAAAATCA
CACTCATTTAGGGTTTAATATTCTGAATTTTATATTATCACTTTCAATGA
GATAAATCGAAATTAGCGGGTGTCCCAAAAAGAAAACTTAACATGAACTT
GACTGTTTATAAATTGACGTTTGCTTTGTGATgtgttttttgaaacttta
cacaagcaaaaagctttaaaagacGCCGGTTATGACGCTAACGGTTATAT
CGGATATTTAATTGTAAACTACGTCAGGGCAAATCTTCATTAAAAACAGA
CAGATAATCAATGATGAAGAAGGGCATTGTGTTATCCATTACACTAATTT
TGTTATTGGTTATAATCGAGGCGCTCGAAACTGACCAATGTGGCCCTAAA
GATTCTTATTTTGTAAAATCGAATAAAGGCTGGGAAATTGGGACGGGATC
TTGGAGTGACTCTTTCAAAGTCGATAATGAGATACAATGCCCCTCAAGAT
GTCATCGTGTGCCTAAATGTGTTTCTGCTGCATTTTATGTGGACACCAAA
ATATGCCGTCTGTCAGATACAAACCGAATGACCGTTAATGTTGTTTTGAA
ACTTGTACCGGGAATTGTGTATTACGAGCGGAAACTATGTTCTTCGAAAA
AGACTAGTTTCATAGCTATCATACCGAGCGCGAAAGATTGCACAGATATA
AAACGAAAGGGTTGGAAATCGTCTGGTGTTTACGCTGTTGGAGAAGGAGA
AAACCCCCGTCAAATTCTTTGTGAAATGTCACTGTTAGACGGGGGTTGGA
CCGTCTTTCAAGAACGTGTCGATGATTCAGTGTCTTTCCAACGGAACTGG
GCTGACTACAAAGAAGGCTTTGGATCGTTAGACGGTAATCTTTGGTACGG
AAATGATCAGATTCACAATTTGACCTGGTATTCTGAGCAAGGTaattaat
tttgttttcttaaATTGATTTGTCAAAGTAGAAATAAATTTGGTTGCAGC
TACCATAGAAAAACtcatctcaaaatattttcattgtgCAACTTGGTAGA
ACTTTcacagatgagatggagtttttataagatactttaataattggtca
tttgtaagtaaaagtaaaataagtaaaaaaattaagcgttctttagaaaa
acgaccaaccaaatcaaataagagcttgtaaaaactccatctcaccCCAA
CTTTCAAGGTGTGTACCACAATCGTGACATGAGCTAAACCTTgctgtttc
ttagtttttttgcGAGCTAAATTTTTCGTTACTTCCAATCTAACGTTTTC
ATGAAAACCACGCGGGCCGCGCGCCTTTGATAGGAAATTAGTGGTTTCAT
CTCCCATCCAAATGTCTTGAGTCTTGCGACACGTGCATGGATATAATAAA
CGCACAGATATCTTAAATGTCAAAAACATAAGATAGAGCGACTCTGAGCT
ACTCTGTTTTTTCCAAGCAACGgtatttgaagcaaaataatccgccatct
CTGCTGAAAAAAGACCATagtagaccatagttcggtaccggcaatttgtt
caatcaaaacaaagaactgATAAAGGAAGCGAGAAAATGTTCTtgattga
tcaaattgccggcgCCAAACTGTGGTCTACTTTTTCAAGATCGCGGATTA
TTTTGCTTCTACCAAGGACGGAGCAGCTCTAtctattgtttttttaatac
aagatATCTGTGGATATACCCTGTTActcattttcagtattttttaaTTC
ACAGGAAACGAACTCTTGATAGAAATGGTAAGACCAAATAACCAAATCTA
TTATCTCCTGTATGATGGATTCAAAGTGGCTGCGGAAAGTGATGACTACA
GATTAACTAGTGGCAATTACCGAAATGCGGGCATTGGAACTGTGATCAAT
GGATATTTTTATGGCTTAGGATCGCATGATCAAATGAGATTCAGTACTAT
CGACCGTGATAATGACATTAAATCGACTGAACATTGTGGACAGGTTAGTT
TGTTTCGTTCTCAACTTTGGCTATAATTTTGTATNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNcggggggggggggtagtagggttggcggat
gagcggtatgtgcggacgggacctccgaaaaccgacccttagagactgag
ttttgctgaaaaggttatccttagagagacttttttacatttttttcact
caaaataaaaaatattttctaaaatcgtgAACTTTCTACCCTTAATGAGA
CTAGTTTAAGCTTACACAGCACCCCTTTTTGACTAAGTAACCCCTCCCGG
ATATAATGTATGTCTTTTCAGATGAACAGATAAAAAGTATACATACTTGA
AGCTGCTTGCTGACCTTGCAAGAACAGTGCAAATAATATACACAAGGTTC
ATCAAGATTGGgctttttcattaaatttccatacaggtgGACATACCTTT
TCTAGGGCAAAAAAGATTGCGAAAATTTGTCGGTACCCCGTGGACaataa
caaaatttgcaaaagaacccttggaaaacTTCTTTCCATACCTTAAATGT
GAGGGTAACGAACTAAAGTCATTCTTTTACACCTtggaaatttttagaat
aaccTTTTAACTCCTGGAAAAAATGATATACATACTTCtttataccccct
ggaaattcttcttcgATTACCCCTAGGAAATGTTCGTAcaccccccctgt
atggatataaaatgtaaTGGCCCATTGTAGATATAGGccattctttttaa
tttttattcaacAATTTCAACGTCAAAGCGTTCTAAATTAATGGTCTTCA
TTATGTAATTTTAGATAGGTATTCCATTGTTCAATGTAGAACAATCACTT
TATGTGGCGcgtgctgttttgttttgacgaTGCAATGTTTTCGCGAGCTC
AGCTTATTTTTCTCAGCTTTAAACTAATTTGGCTTCCTTTACATTGTCCT
TATTGGAATGAGGTTAGCGAGGGATGCccccacagatatcttatttAAAA
CACCAGTCTATATTGAGCTACTCTatatttcccaagcaacggcaGGTGAA
GCAAATCAACCCACTATCTTTGCTTAAGTAGGTCACGTTAAGTAGGTTGG
TTTTCactgttgaaacttttttgacactgcaatgacaaaatttcaaggtt
gcGAGATAACtaaattgtgacgtcacttctTTCAAGATGGcgaattattt
tgcttcagcctctttaggcgtacaaactttcgcgagcagaaactttcgtg
agcagaaactttcgtgagGACGAAAAATTcgagacatttactttcgcgaa
tttaacggaaaagattttcgcgaaaagagccaaaattcgcgaaaatcgcg
aaagttactgctcgcgaaagtttgtacgcctaaagtaggtCCGGAGTAGT
ATTGTTTTATAAAAGATATCTGTGGTTGCCCTTCCTCATTTgtatttttc
cgatttttgttAACCTTCATGCAAACGATAtcacaatttctcttttttag
aaCCGTGGTAGTGGATTTTGGTTcaattattgtttttttctctcGCTTAA
CGGGATGTATGGTTCCCAATATAGCGGCTCACCATACAGAGGAATTCATT
GGACCTATTTATGTGACGGCCCGTTTTGTGAAACTCTCATTTCAACTCGA
ATGATGACTCGACGAAAACAATAAGAATTCTGCTCAGCCTCCACGCGCCC
GGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNcccccccccccccctcgggtcC
ATGCGCAACTTAATATGAATCATTcctggtcgaaatatattgagaccATC
TCGGGGTTTgggaaaattctcaaaacttaataagtgggggggggttggaa
taaaaatgttttgggtggaaaattttcgaaaatcaattAGCAGGGGagac
gcttattaggtacccgagagtaacggttttcaaaattgttcaaaagaGAG
TTCGGGAGAGGATTGCGATtttagtacttccactttgtttcatcgaatat
ttcatttttggaGGGGTTCAGTGGCTTCTACACTATATTcccagccttat
tggaacactTTTGATCTTTTGAGTCCTTTTTTGACAATATGGCCTAAAAT
GTTTTTGTTATAGCAATTaatcttaggttccaaataaacgccccctcccc
CCAACTTGCTAATCTTTCGAAagttttccaacccccctggaccttattag
gtttaaaaaaatttttaggaatattttcagctgtcaaagagaaggcccct
tattttgctctagatagcctgattttagcctatatttaccttatttttgg
gttttcagaagtacaatttccaacccttccggtaattaggcccccccccc
cgtttattaaagtCTCGAAAAATTTTGCTATAAATAGAAAGGCTAtaaaa
aattggccttaaagTCAAACAAATATGCTTTAAATTAAAGTTGGGTAAAT
GCAATTATGAAGTTTTCTTATGAATTTACTAATTTTGATAATGTTTGACA
ATTCTCAGGCTGGCCATGTTTTTACGGTATTTTCCCCTAAATTTCAGCCT
AAACGTTCTTTCTTATAAACTTGattgtaataatttttttattattatta
tacagaaTACGGTTTCAGGCCCGTTCAGGTCCTCTCTAAACCGATCTTGT
Tttataaaatatcttttttaaagtctattcacgataagtgtgcactcttt
tttcttttacctataacttttgaaggaattcttcaatctttataaatttg
gtatcgttggagagaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNtaaagatttttttatttcaaattgttccactca
ctaatatctttccaatgacaccaaatttataaagattgaagaattccttc
aaaagttacaggtaaaagaaaaaagagtgcacacttatcgtgaatagact
ttaaatacCAATGCTATTTCCAGTCTTGATATTGACGCAAACTTTTTTCA
ATGTTCATACTACGATATGTCTATTTGATATGACGTCATTGACGACAAGG
TAATCTGTTATGAGCGTTGACCTTTATATATTCATGAACCAAGTTACTCA
ATTCCGGCcaaccaaaaatctttgatcggagtttttttgaaattggtatc
ttaatggcggcactactcaatggcggcactactcaatgaCGGTGAAAATG
CATTGAgggcgctagatctactttccctcgaatACTTTTGACGATGTAGC
TCCTTTAGACggtaatttttaacactgcaatggcttcttctcgggtacca
attccaacaAAAACTCCGAGCAAAGATGGAGGATacagcttggtccaggg
atatataaaagtCAGTGGTTATGAGACAAAAATCCGGACGGTAATGAAAC
CGACAGATTGGAAATTGACAACCTTTTCAacactacagttgacgctctct
ctaattcgatcttcaacgGACTAAGAATTTTCTTGCAAATTTGAATATCC
AAATTACAGAAAATATTGTATACTAATttctagctgaggggaccaatatt
ttagttcgaattatagaaagattcgaatagtagagttCGGACTAGAGAAA
GTTAtacttgttttttcttttcttttgcgaCTATAGTACGGGTCATAAAT
ATCTTTTATAAAACACGAGATGGAGGTACTTTGTCCATGTCTGAATCAAA
TTGATACAATAGACCACATTTCGGCACCGGCAGTTTGATCAATCAAGATC
ATTTTTTCACCTCGTTTCCTGCCATTCCAGTTATTCTGCTTGAGCGAATT
ACCGGTACCGAACTATGTTTTACTCTGCGAAGATGGTGGATCCTATTACT
ttaaatgggctcttccagaaaattagCTCGCTTTAAACTAAGGCTTTCTT
TTAGTTTATGTAATGTAGTATGCGATTTCGTGCTAATTCTATTCGTATCT
TGCGTGTTTTAGAGAACATAATCCATACTAATGCGACTGCTCACTAAATT
TTACCACTAATTTGCTGATTGGTATTTATTACACAGAGTGCCCCATGGAA
TTCCCCTTCAAACAATAGTACCTTCGATCTATTGTTTCTAGGGGAACCTT
TATGAAATACTCTACCAAAGTCTTGATTAAAATTTTCttgtaccgggtgc
accaaaaaaaagtatacaactttgtcgagatattgtgagcttcaggattt
atattttttgttcattctttttttattgtatagaggatgctctaacttga
attttgagctattatacattaaatttgaaaaagtagttcaaaagttattt
ccaaaaaactgactttttttccatgtcgaaatttcaagtaatcattaaaa
acagcaatcacgctataaataagacaaaatgacaaaaacacaatttcatt
gtcttttttattcttttttctcctatgttatattttgccaacggtttgtc
catcttatttacacgtcatgaatattttcaacaccagcaaactcaatgca
agttctttgagcaactagttgaggaatggtgatttcttttttttttctca
cttaGCACACCacacctctcttggagatttccaaaaaaaattttcagcct
taccaaaaatattttcccacatGGGagtagcttgttttaccatattctta
aattccgtaacaagttttgatgaacacagtttcattttttggtatttttt
tgtgTAAAGAAGTGAGtgccaagagaaaagtttgctcgctgtttttaatg
attttttgaaatttcggcattaaaaaaaagtcagctcaaaattcaagtag
catcctctatgcgataaaaaaagaatgaacaaaaaatttaaatcctgaag
ctcacaatatctcgacaaagttgtatacttttttttggtgcacccggtac
atGATTTATTTGTAAtataaattatatttctttttgattattTCATACTC
AACATCGTCaaattataaatttgaaaattttttcgatatTTCTTACTAAA
CTAAGGCTTTCTTTTAGTTTATGTAGTATTTATACGATCTCCTCTAGGAG
GGTATTTTACAGAGTGCCCCATGGAAATCCCTTTCAAACAATAGTACCTT
CGATCTATTGTTTCTAGGGGAACCTTTATGAAATACTCTACCAAAGTCTT
GATTAAAATTTTCTTGTACATTATTTATTTGTAAtataaattataatttt
ttttgattgttATATACTCAACATCGTCaaattataaatttgaaaatttt
ttcgatatTTCTTACTAAACTAAGGCTTTCTTTTAGTTTATGTAGTATTT
ATACGATCTCCTCTAGGAGGGTATTTTACAGAGTGCCCCATGGAAATCCC
TTTCaaataatagacgatatcggctttccgaattctccccgaatgattac
caatGATGCATTTCGCGGAAAGTCAATaccgtccgtgaatttttttgcgc
aatgcatcatgggtaatcattcggggagaattcggaaagccgatatcgtc
tattgaacTACGATCTATTGTTTCTGGGCAGCCTTTATGAAAGATTTTGT
AAAGTCTTcattaaatttcttttgtataaTATTTTGTATGTAATTAATGT
TATTcgcatttaaaattttttagccTCCGATATTTATTATATATACTCAG
ACTTTCCTTAACTTGGTccaatgtcgacatccctcttctaattccgacac
acTTTTTTAGAGCCGAAGATAGTTGAAATgtcgaaactatttttcttcAC
TCGGTGGTGAGAGAGTCCTTATTCAATCATCAGTGATTCAtgttattcct
atctctaaagaaggatgttgGAATTAGAtaagggatgtcgatattagacc
aacttacggtatagaTTGTAATTATTATGATCAGAAAGATGTTGTAAATT
TGACTGTTTTTTTCTTAGATCAaaatttttagtcaatttttggTGCAGAA
TGCCTGAAATATTTCTCGAATACGTTTggtgtgaaaataaaaaatgaaga
aatgttgCAAGAATCACTGTGGAAAAGTGATTTTTCTCTCGAGCCGGATT
CAAGAAAGGCCTGCTGAACTCCAGATCCCTTAGTTTAAATCACATACCGC
AGACCCCAGTCCTCTATTTCCTATTTCTTATATAAGAGGAAGGAAGCCCA
CAGAAAAAttctaatttgaaatttacATGTTTTGGTGTACATAAGGGCCt
tctgaaaaaataattttcttgggGAGGGGGGAGGTGTTCCAGTAACTGTC
TTTTTCCCTGGTCAAATAGAGCTGTAGATTAGATTTAAGAACACTTTCTC
ACCAGGTTCTATTTTTAGGGAGTCTATGGTGATAGAATGTAAAAAGATAC
TCGTGatcatgtatttttttataatttcaggGCCGCAGGGAACACGCAGA
ATATCAAACGCAAGAATAAGCATCCTTCAGAAAAAGCTAGATATCATTCT
AAGTAAGTAATGGCCATTCCTCCTTCTTGTCTAGATCCTAACTGACTGAG
GGCGACGGTGGATTAGCACTTATACCGTCCTTGACTTTACGGGTCAAAaa
tgcgggttattccaaatagcttcagtcactctaccttCCCGTCTTGCAAT
AAGTTGAGAggtcagattataaaaaacttctttaatcggattaaatttcg
cgagtcagatttttaaaaaagttcacGTGGTTTTAATTTCGCAAATAAGC
CTGATAACAGCTGCAAATAGCCATTTTTTAGCTAATAATGGAGACTTGGT
ACTGGTTTTTCCGTCGAAAAtgccatttaaaaaattttgttgtgGATTTA
GTTTCATGAGTCAGGAATCTCACggtaaaaatggcaaaaattcgcgaaat
cgtgaaattaaatctcgcgaaagttaatccgattaaagtattagGAATTA
GAAGTTCGTTCATAGCTTCGCAGATCCGAATGGCATTGACGAAAAGAAGC
TCGGTGATAATTTAATGATTGAATAAGTaatacttaaaggttttatttct
acataagtgtttccctttcatatcagacacatatttcatatcaggacagt
gttttcctctttctgaccaatattgctccacatctgtgtcaattcaatgt
gaaaaagattgtgattcaaaattgacgagtaagcaaacggtatcagtctt
atttaaaaacaaaacctttaaaatagaTCACTAGGAGATAGACTCAAgta
aaacaaatccaaaaataaaattttgcggCTTTGCTTTTGATTCACTGGTT
GACGAGTCagaaaaacggtcagaatctctaAATATCTCGATTTTTTGCTT
AGTTTCTGAGGTATCCCCTGAATTCGCGTTGAATTGGACACACAATCTTA
TTGGCCACCCTGGGTTATTGAAGTTTTTTTGAGAGTGACCTCTTGGGTGG
AATGTCCTACTTCCTCAACTAAATTTATTCCTTAATTCACACCTGGAAAA
GTGGTTTATCATGGTAAAGTTACGTAACTGGAGGCAAACGTTCGAATCCT
TAGAGGCCATAACTTACGCACATCGAACGGCTGCTTCCACAATGGCagaa
gttacgtaacttaactAAACATTGTAAACCTGTTAAGTCTGATTCATTTT
CTATGCAACATCGGTATTTTTCTTCCCCCACAGTATGCGAGATATGGAGA
TCTTTCAACGGGTAACGACACATCCAAAGTTCACTGGCAATCCTGTCAAT
GCTATTTCTGAACATGTTAAATATCTCATGCAACAAGAAGAAGATGGTGT
GGAAACATGATCCAATACTGGTGATTTAAAGGTacaaccatagatttata
aagcccatagggctagatgtcgtgcttcggctgaaaagtgtgccgttgtt
aggtaggaaatcctacctaggtcacatGACATAACagtcagaagcttcgc
gggttttcgaaaacaatggcaacaatattttttccgatactcattttttt
t

Coding sequence (CDS) from alignment at scaffold_311:1276660..1293660+

>TCONS_00058499 ID=TCONS_00058499|Name=TCONS_00058499|organism=Clytia hemisphaerica|type=CDS|length=2820bp|location=Sequence derived from alignment at scaffold_311:1276660..1293660+ (Clytia hemisphaerica)
ATgggaaaaatcaataaaaacatcTCGATAAAACCTTTCCGAAGACAACA
GAACCATCCAACGAAGAAAACACAAGGCACTGATaaGACTAAAGTGGCCC
TATCGTCAGCCGCTTTaaacaaaggaaaaacaaagaaagcaaaaCGCGAT
CTGAAGAAATGCACTCTAATCAATAAATTAAAAAAGTCTGGCGAAGCGAA
AGAGAAAATCCAACGTGCCAAACAGAAAGCGCAGACACCTGTCGTAGGTA
ATATGGATCCTCTGTTAGACGCTTTGTCAGCCATTGTGGACGAAAGTGGT
ATTAATTTGAATGCAAGTGAACATGAAACGCATCAGAAGAAGACAAAGAA
AGCCAAAGGACACAGgGCCGCAGGGAACACGCAGAATATCAAACGCAAGA
ATAAGCATCCTTCAGAAAAAGCTAGATATCATTCTAATATGCGAGATATG
GAGATCTTTCAACGGGTAACGACACATCCAAAGTTCACTGGCAATCCTGT
CAATGCTATTTCTGAACATGTTAAATATCTCATGCAACAAGAAGAAGATG
GTGTGGAAACATGAATgggaaaaatcaataaaaacatcTCGATAAAACCT
TTCCGAAGACAACAGAACCATCCAACGAAGAAAACACAAGGCACTGATaa
GACTAAAGTGGCCCTATCGTCAGCCGCTTTaaacaaaggaaaaacaaaga
aagcaaaaCGCGATCTGAAGAAATGCACTCTAATCAATAAATTAAAAAAG
TCTGGCGAAGCGAAAGAGAAAATCCAACGTGCCAAACAGAAAGCGCAGAC
ACCTGTCGTAGGTAATATGGATCCTCTGTTAGACGCTTTGTCAGCCATTG
TGGACGAAAGTGGTATTAATTTGAATGCAAGTGAACATGAAACGCATCAG
AAGAAGACAAAGAAAGCCAAAGGACACAGgGCCGCAGGGAACACGCAGAA
TATCAAACGCAAGAATAAGCATCCTTCAGAAAAAGCTAGATATCATTCTA
ATATGCGAGATATGGAGATCTTTCAACGGGTAACGACACATCCAAAGTTC
ACTGGCAATCCTGTCAATGCTATTTCTGAACATGTTAAATATCTCATGCA
ACAAGAAGAAGATGGTGTGGAAACATGAATgggaaaaatcaataaaaaca
tcTCGATAAAACCTTTCCGAAGACAACAGAACCATCCAACGAAGAAAACA
CAAGGCACTGATaaGACTAAAGTGGCCCTATCGTCAGCCGCTTTaaacaa
aggaaaaacaaagaaagcaaaaCGCGATCTGAAGAAATGCACTCTAATCA
ATAAATTAAAAAAGTCTGGCGAAGCGAAAGAGAAAATCCAACGTGCCAAA
CAGAAAGCGCAGACACCTGTCGTAGGTAATATGGATCCTCTGTTAGACGC
TTTGTCAGCCATTGTGGACGAAAGTGGTATTAATTTGAATGCAAGTGAAC
ATGAAACGCATCAGAAGAAGACAAAGAAAGCCAAAGGACACAGgGCCGCA
GGGAACACGCAGAATATCAAACGCAAGAATAAGCATCCTTCAGAAAAAGC
TAGATATCATTCTAATATGCGAGATATGGAGATCTTTCAACGGGTAACGA
CACATCCAAAGTTCACTGGCAATCCTGTCAATGCTATTTCTGAACATGTT
AAATATCTCATGCAACAAGAAGAAGATGGTGTGGAAACATGAATgggaaa
aatcaataaaaacatcTCGATAAAACCTTTCCGAAGACAACAGAACCATC
CAACGAAGAAAACACAAGGCACTGATaaGACTAAAGTGGCCCTATCGTCA
GCCGCTTTaaacaaaggaaaaacaaagaaagcaaaaCGCGATCTGAAGAA
ATGCACTCTAATCAATAAATTAAAAAAGTCTGGCGAAGCGAAAGAGAAAA
TCCAACGTGCCAAACAGAAAGCGCAGACACCTGTCGTAGGTAATATGGAT
CCTCTGTTAGACGCTTTGTCAGCCATTGTGGACGAAAGTGGTATTAATTT
GAATGCAAGTGAACATGAAACGCATCAGAAGAAGACAAAGAAAGCCAAAG
GACACAGgGCCGCAGGGAACACGCAGAATATCAAACGCAAGAATAAGCAT
CCTTCAGAAAAAGCTAGATATCATTCTAATATGCGAGATATGGAGATCTT
TCAACGGGTAACGACACATCCAAAGTTCACTGGCAATCCTGTCAATGCTA
TTTCTGAACATGTTAAATATCTCATGCAACAAGAAGAAGATGGTGTGGAA
ACATGAATgggaaaaatcaataaaaacatcTCGATAAAACCTTTCCGAAG
ACAACAGAACCATCCAACGAAGAAAACACAAGGCACTGATaaGACTAAAG
TGGCCCTATCGTCAGCCGCTTTaaacaaaggaaaaacaaagaaagcaaaa
CGCGATCTGAAGAAATGCACTCTAATCAATAAATTAAAAAAGTCTGGCGA
AGCGAAAGAGAAAATCCAACGTGCCAAACAGAAAGCGCAGACACCTGTCG
TAGGTAATATGGATCCTCTGTTAGACGCTTTGTCAGCCATTGTGGACGAA
AGTGGTATTAATTTGAATGCAAGTGAACATGAAACGCATCAGAAGAAGAC
AAAGAAAGCCAAAGGACACAGgGCCGCAGGGAACACGCAGAATATCAAAC
GCAAGAATAAGCATCCTTCAGAAAAAGCTAGATATCATTCTAATATGCGA
GATATGGAGATCTTTCAACGGGTAACGACACATCCAAAGTTCACTGGCAA
TCCTGTCAATGCTATTTCTGAACATGTTAAATATCTCATGCAACAAGAAG
AAGATGGTGTGGAAACATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036856XLOC_036856Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058499-exon-scaffold_311-1491911889:1276660..1276808TCONS_00058499-exon-scaffold_311-1491911889:1276660..1276808Clytia hemisphaericaexon
TCONS_00058499-exon-scaffold_311-1510915933:1276660..1276808TCONS_00058499-exon-scaffold_311-1510915933:1276660..1276808Clytia hemisphaericaexon
TCONS_00058499-exon-scaffold_311-1575043694:1276660..1276808TCONS_00058499-exon-scaffold_311-1575043694:1276660..1276808Clytia hemisphaericaexon
TCONS_00058499-exon-scaffold_311-1491911889:1277425..1277515TCONS_00058499-exon-scaffold_311-1491911889:1277425..1277515Clytia hemisphaericaexon
TCONS_00058499-exon-scaffold_311-1510915933:1277425..1277515TCONS_00058499-exon-scaffold_311-1510915933:1277425..1277515Clytia hemisphaericaexon
TCONS_00058499-exon-scaffold_311-1575043694:1277425..1277515TCONS_00058499-exon-scaffold_311-1575043694:1277425..1277515Clytia hemisphaericaexon
TCONS_00058499-exon-scaffold_311-1491911889:1279003..1279192TCONS_00058499-exon-scaffold_311-1491911889:1279003..1279192Clytia hemisphaericaexon
TCONS_00058499-exon-scaffold_311-1510915933:1279003..1279192TCONS_00058499-exon-scaffold_311-1510915933:1279003..1279192Clytia hemisphaericaexon
TCONS_00058499-exon-scaffold_311-1575043694:1279003..1279192TCONS_00058499-exon-scaffold_311-1575043694:1279003..1279192Clytia hemisphaericaexon
TCONS_00058499-exon-scaffold_311-1491911889:1292090..1292161TCONS_00058499-exon-scaffold_311-1491911889:1292090..1292161Clytia hemisphaericaexon
TCONS_00058499-exon-scaffold_311-1510915933:1292090..1292161TCONS_00058499-exon-scaffold_311-1510915933:1292090..1292161Clytia hemisphaericaexon
TCONS_00058499-exon-scaffold_311-1575043694:1292090..1292161TCONS_00058499-exon-scaffold_311-1575043694:1292090..1292161Clytia hemisphaericaexon
TCONS_00058499-exon-scaffold_311-1491911889:1293343..1293660TCONS_00058499-exon-scaffold_311-1491911889:1293343..1293660Clytia hemisphaericaexon
TCONS_00058499-exon-scaffold_311-1510915933:1293343..1293660TCONS_00058499-exon-scaffold_311-1510915933:1293343..1293660Clytia hemisphaericaexon
TCONS_00058499-exon-scaffold_311-1575043694:1293343..1293660TCONS_00058499-exon-scaffold_311-1575043694:1293343..1293660Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058499-proteinTCONS_00058499-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_311supercontigscaffold_311:1276660..1293660 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
34.2611	32.2096	16.8537	14.9361	2.50629	3.6391	5.81099	6.4297	9.93077	7.6297	8.94181	8.19076	9.53846	8.2615	12.9958	15.7293	15.1136	17.0513	6.97486	6.71738	11.8396	11.0589	30.3066	26.371	8.22913	7.22214	6.06014	6.53155	11.7232	14.2166
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00058499 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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