TCONS_00058546 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058546
Unique NameTCONS_00058546
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1367

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058546 ID=TCONS_00058546|Name=TCONS_00058546|organism=Clytia hemisphaerica|type=transcript|length=1367bp
CTTTCTCAAACTTTTTCCAAATCGAACATAATTTCACACTAAGGTCAATA
TATTAGTTGACTCACTCGGTAGCGCAAAATGAAGCTGGCcagaatttttt
tacttttaatggTTCTAAAGATCCATCTTATAAATGCTCACAATATACTT
CGTCTTGCTGACCAACGTTCTGCAAAATTCCTTCTTCGACATGATGGTAA
AGTACCGAACAGAGAACCATATATTGAATTCAAAACTGATTCCGTTGAAG
TTTGTATGGATAGATGTGTGGCAGGTGCCCCAtgtaaatcaatcaattat
aaCTCAACTCTCCAAACCTGTCAACATGTTGACTACGATATTAATGACGG
GAAAGATTACAGAACAAAGCCGGGATGGCAGCACTACGACACCGGAAAAA
CCCAACTGACACGGATCTTGGATGGAACACAAAATTATTGTGTCACCAAT
ACTTATTCAGATCCTTGTAACCCTGGGTCCGGCCCCTATTATCATTTAAG
GTATAAACCAATAACAGATGCATCTTGTACTGGAATCGAGGCTTATTATG
AATTTGATGAAACACTGGGTACGATTAAGCATCATTGTTCTGGTCTTTTT
CTTATCAAATACATAGGATACGTGACGCTTCAACCGGAAAGCTCACTTTC
TGGCTCTTTACTGACTAATGAAGTTTATCGTTGGCGGAAAAACTCTCATA
ATTTTTTGGATCATAACCATCAAGCTTTTTATCCGTATAACGGCCTATCC
GATGGGACATGGACTCGGTACACATCTTATAACGTCTTACCTGGAGCTGG
CTCTACAATCGTCCTGGACAGAATTGTTCATCCCGTCAAATTCGAAATGA
TGCATACAACAATCTCAAATTTCGACAATTTCGAATCTGAATTTAGAAGT
AGATTTGCTAACGGTTACCAAAAGACAGTCTATCAATCAGATTTCAATAT
CTACCCGTCAATGGGTGACACTTATGCTGTTCGGATGCAAGCTTTATTTT
CACCGGACGTTACTGGGACATACTCTTTTTGGCTAAGAGGCGATGACTAT
GCTTTACTCTTTATCGGCGAAGATGAAACTCCTGCCAGCAGAAAGTTTGT
TGCTAAAAGACCAAACAACTACGCTTATTATGCTACGGATGCTAAAGgag
aaaagtttttggaaaaagaaaagttgtattACATTGAATTACTGTTTTAT
GAACATTTTGGCGGTGATTGGTTAATTTGTTCCATGATTCGACCTGGTGA
TGTTGATCGAATAATTGTATCGTCAGATCATTTGTACCCTCTaccttgaa
aatattcttaaattgaCTCATACTagagtctgtctcaatataatttgcag
tggagacaaaaaaggct
Run BLAST on NCBI

protein sequence of TCONS_00058546-protein

>TCONS_00058546-protein ID=TCONS_00058546-protein|Name=TCONS_00058546-protein|organism=Clytia hemisphaerica|type=polypeptide|length=406bp
MKLARIFLLLMVLKIHLINAHNILRLADQRSAKFLLRHDGKVPNREPYIE
FKTDSVEVCMDRCVAGAPCKSINYNSTLQTCQHVDYDINDGKDYRTKPGW
QHYDTGKTQLTRILDGTQNYCVTNTYSDPCNPGSGPYYHLRYKPITDASC
TGIEAYYEFDETLGTIKHHCSGLFLIKYIGYVTLQPESSLSGSLLTNEVY
RWRKNSHNFLDHNHQAFYPYNGLSDGTWTRYTSYNVLPGAGSTIVLDRIV
HPVKFEMMHTTISNFDNFESEFRSRFANGYQKTVYQSDFNIYPSMGDTYA
VRMQALFSPDVTGTYSFWLRGDDYALLFIGEDETPASRKFVAKRPNNYAY
YATDAKGEKFLEKEKLYYIELLFYEHFGGDWLICSMIRPGDVDRIIVSSD
HLYPLP
Run BLAST on NCBI

transcript from alignment at scaffold_311:763257..768019-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058546 ID=TCONS_00058546|Name=TCONS_00058546|organism=Clytia hemisphaerica|type=transcript|length=4763bp|location=Sequence derived from alignment at scaffold_311:763257..768019- (Clytia hemisphaerica)
CTTTCTCAAACTTTTTCCAAATCGAACATAATTTCACACTAAGGTCAATA TATTAGTTGACTCACTCGGTAGCGCAAAATGAAGCTGGCCAGAATTTTTT TACTTTTAATGGTTCTAAAGATCCATCTTATAAATGCTCACAATATACTT CGTCTTGCTGACCAACGTTCTGCAAAATTCCTTCTTCGACATGATGGTAA AGTACCGAACAGAGAACCATATATTGAATTCAAAACTGATTCCGTTGAAG TTTGTATGGATAGATGTGTGGCAGGTGCCCCATGTAAATCAATCAATTAT AACTCAACTCTCCAAACCTGTCAACATGTTGACTACGATATTAATGACGG GAAAGATTACAGAACAAAGCCGGGATGGCAGCACTACGACACCGGAAAAA CCCAACTGACACGGATCTTGGATGGAACACAAAATTATTGTGTCACCAAT ACTTATTCAGATCCTTGTAACCCTGGGTCCGGCCCCTATTATCATTTAAG GTATAAACCAATAACAGATGCATCTTGTACTGGAATCGAGGCTTATTATG AATTTGATGAAACACTGGGTACGATTAAGCATCATTGTTCTGGTCTTTTT CTTATCAAATACATAGGATACGTGACGCTTCAACCGGAAAGCTCACTTTC TGGCTCTTTACTGACTAATGAAGTTTATCGTTGGCGGAAAAACTCTCGTA AGTTCTATACTAATTTAATTTCTATAATTCTATACTTAAATAATAGGAAG TAAATGGGCTGTTCCATTCAAAATTCATACAGATGGTGCGGGGGGGGGGN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNGGTGAACGAACCTTTTCAATACCTTCGCAGAATTT GCCAAAAAAAACATGGAAAATCTTTTTTGTAGGAGTATTTGCATTAATAA AGAGAAATAAAATTTGTTCATGGTAAAGCTGCTAAAAATAGAGATAAAGA AAATAAATTCCTAAACTAAAAACATTTGCAGGAGTTAGAAGAAGACATTA CTGCCTTTTCAACTAACCCCTTGAAGCGAAGTTTGCTTATTTACAGTCTA AATAGAGCGAGAAAATTAAAAGATGTTTTATGTATACTATATGTACGTGT ATATAAAAAGTTCCTTGAACCCTCTGGAAATTCTTCTTGGGATTATCCCC TGGAAATGTTTGTCCACCCCCATACAAAACCAGAATCCGAAAATAAGTCA GAAAAATGTCCCGAAAATAATTCTAAAATTGCTAAAAAAACTTAAACTCT TGAAAGAAAGTCAAAAATAATCAAAAAAATCTTACAAAATCCAAAAAAAT GTGAAATCCTAAAATCTCAACCAAAAATCCAAAATATCTCAAAAAATTTC ATCAAGTCTGGAGAAAAAATATTCAAGTGATCTGCCTCACAGCAATTTAA ACAAGTTCAAAAATGCAAAAAAAATTGATTCAACGTTTATTGGCATGGGT TGGTTAGATTCATATCGTATTATTTCTATCATTAGATAATTTTTTGGATC ATAACCATCAAGCTTTTTATCCGTATAACGGCCTATCCGATGGGACATGG ACTCGGTACACATCTTATAACGTCTTACCTGGAGCTGGCTCTACAATCGT CCTGGACAGAAGTATGTTGTTTTATTTATATCTTAACGATATTTCGACCA CTTTACGTGTCTTTTTCAAGCTACTATGTACAGATTTTGATCCTATATTT ATGGAAAAAATAGTACCTTAAAGGAAGAAATTTTGGCGGGAATTTAATTT GGCGGATGGCCAAAAAAACTAAATTTGGCGGGAATTTAATTTAGCGGTCG TTTAAAAATTTAACCTTAAGATGGCGTCAAAACATCGAAAAAATGGCAAA AACACCTTAAAAGAGATCATATTTTTAAATTGTTTAATTTGGCGGGAATT TAATTTGGCGGATGGCGGAAAAAAGAAATTTTGGTGGGAACTTAATTTGG CGGATTTCAGTCAAATCCGCCAAATCCGCCAAATTTTCTTTCCGCCAAAA TTTCTTCCTTTAAGGTATTCATGATATGTACCACTGCATTGTCTCTAACA TTCACAGACTCAACAGCTGGTTGAATGATTTTACGCCACTTACAATTAAC CAATCAGATGTTGTAGTGATTCATATCATGAATATGGGTATTTACTGTAG TTATCTAGCGAGCAAATGTCGTTATGATTTAAACCAGTATTGCAGGATAA ATCTTTTGTCATTTGTTTGAATACCTCAAGGAAGAAATTTTGGAGGAAGT TTTAATTTGGGAAATGGTTAGAAAATTTTAATGCGATGGTTGCATGGTAG ATTCTTGGTAAAAATTGTTATTGCACAAGAATTTCTTAAAAGATGAGTAA AATACAAATTAGAGTAAGTTTGAGTTTGTTGGAAAGGTTATATCCGTCAA ATACTCTAAATGCTCTATACACCTTTTCGACCGTAGCCGCCAATTGCCGC GCGGGCATTTTTTTGTCCGTTTTATCCCATTAAAACCGTCCCAGTCCTTT TTTCGCATCTAAAGAGAATAGAAAAATGTGTCAAAAAAGGATTGGATCGA GTTTAGGGGGATAATTAAATAATCAAATGGCACGCGTCTGACCGCGCGAC TACGATCGAAAAGGTGCATTATTAAAAGCGTTTTGTTCTTATCTCTTTTC AAAGTTGTTCATCCCGTCAAATTCGAAATGATGCATACAACAATCTCAAA TTTCGACAATTTCGAATCTGAATTTAGAAGTAGATTTGCTAACGGTTACC AAAAGACAGTCTATCAATCAGATTTCAATATCTACCCGTCAATGGGTGAC ACTTATGCTGTTCGGATGCAAGCTTTATTTTCACCGGACGTTACTGGGAC ATACTCTTTTTGGCTAAGAGGCGATGACTATGCTTTACTCTTTATCGGCG AAGATGAAACTCCTGCCAGCAGAAAGTTTGTTGCTAAAAGACCAAACAAC TACGCTTATTATGCTACGTAAGTATATAGATCTTTTGAATTACAAACAAT TTAGGTTTATAGTAGGGGGCCAAGCCTGGGATTCCGTGACATCTTTTTTA CGACCTAGCCATTTTAAGTATATTCGAAGGAACAGTATATTACAAGATAT TTTTGAAAGGGAGGATGCAGATTAGAACGGTATGTTTTTGAACTTTGAAA GTTAAATTCTTCTCTGAAATTTATTGTTGAAAAAAAGACAAAATTTTTTA TCTCGCTCGGAAGTTGACCACAAAATGTTTAATCTCCCTGGGAAGTTCTT GCTCCAGTCCTTGATAACTTTAGTTTAATACTTTAAACAAATGAAATGGA ATCCCGGAGGGTACTAGGGTTGCGAGCTGACAGGGGGGTACCACCCGATT TTCGAACTTTGCCCTTTACCGGGACTAAAAAGGAGAAAACAAAGGAAAAT TTTGGAAATTTGACCAATTTTGACCAAATTTTGATCTTTCAGGGGGTAAA AAGTTGAAATTTTCCTATTTTTCCGACCCTTAGCGGGACTTTGGAAGTCT TAAAAAGGTACCCTTAACCCTATTAGCCCCAGGGGGGGGGTAGAATCTAC CACGCTGGAGTTCTTTTGTTTATATCTCAAAGAAAAATTTTTTAAACGAC TTGAAACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNAAAAATCTAAAGAAAATTTTTGAAAATGATGACGTCATCA TTTATGACGTCATCAAATTTTGAAAATTTTACTCATCTTCAGCATAAATT TTAAGAAAAACTCTTCATGGAAATTGCAAAACCATTAATTATGTTAAAGA ACAGTCTTTTACCTTTCAGAATCTTCAAACAGAATTGAAATATCTTTATT GGTTCAACTGTAATAGACATTTTTGTAAACCATATATTTGGACTTTTTTC CGAAAGGTGGAAAATTTGTGATGACGTCATCAGTTTTTGCATGACGTCAT CAAAATTTTTTTTCTTCCTGGAAAATTGTATCATGATGGAGAACATCTGT ACCAAATTTCATGGCCATAGCTCTTCTAGATCGAAAATAATCGAGGGTGG TAGATTCTACCCCCCCTGGGGATACAAAAGTCAAAAAAGCTTGGGGCTAA TAGGGTTAAGGGCGGCACTAAATATAAATATAAAGGAATTATTGGAATAA ATTTAAAGGATTTATCGTACAAGAAAGAAAATATAAGAACAGTTATACAA CTTCGGAATTCTATTGATTTTCTTCCTTTTAGGGATGCTAAAGGAGAAAA GTTTTTGGAAAAAGAAAAGTTGTATTACATTGAATTACTGTTTTATGAAC ATTTTGGCGGTGATTGGTTAATTTGTTCCATGATTCGACCTGGTGATGTT GATCGAATAATTGTATCGTCAGATCATTTGTACCCTCTACCTTGAAAATA TTCTTAAATTGACTCATACTAGAGTCTGTCTCAATATAATTTGCAGTGGA GACAAAAAAGGCT

Coding sequence (CDS) from alignment at scaffold_311:763257..768019-

>TCONS_00058546 ID=TCONS_00058546|Name=TCONS_00058546|organism=Clytia hemisphaerica|type=CDS|length=4884bp|location=Sequence derived from alignment at scaffold_311:763257..768019- (Clytia hemisphaerica)
GGATGCTAAAGGAGAAAAGTTTTTGGAAAAAGAAAAGTTGTATTACATTG
AATTACTGTTTTATGAACATTTTGGCGGTGATTGGTTAATTTGTTCCATG
ATTCGACCTGGTGATGTTGATCGAATAATTGTATCGTCAGATCATTTGTA
CCCTCTACCTTGATTGTTCATCCCGTCAAATTCGAAATGATGCATACAAC
AATCTCAAATTTCGACAATTTCGAATCTGAATTTAGAAGTAGATTTGCTA
ACGGTTACCAAAAGACAGTCTATCAATCAGATTTCAATATCTACCCGTCA
ATGGGTGACACTTATGCTGTTCGGATGCAAGCTTTATTTTCACCGGACGT
TACTGGGACATACTCTTTTTGGCTAAGAGGCGATGACTATGCTTTACTCT
TTATCGGCGAAGATGAAACTCCTGCCAGCAGAAAGTTTGTTGCTAAAAGA
CCAAACAACTACGCTTATTATGCTACATAATTTTTTGGATCATAACCATC
AAGCTTTTTATCCGTATAACGGCCTATCCGATGGGACATGGACTCGGTAC
ACATCTTATAACGTCTTACCTGGAGCTGGCTCTACAATCGTCCTGGACAG
AAATGAAGCTGGCCAGAATTTTTTTACTTTTAATGGTTCTAAAGATCCAT
CTTATAAATGCTCACAATATACTTCGTCTTGCTGACCAACGTTCTGCAAA
ATTCCTTCTTCGACATGATGGTAAAGTACCGAACAGAGAACCATATATTG
AATTCAAAACTGATTCCGTTGAAGTTTGTATGGATAGATGTGTGGCAGGT
GCCCCATGTAAATCAATCAATTATAACTCAACTCTCCAAACCTGTCAACA
TGTTGACTACGATATTAATGACGGGAAAGATTACAGAACAAAGCCGGGAT
GGCAGCACTACGACACCGGAAAAACCCAACTGACACGGATCTTGGATGGA
ACACAAAATTATTGTGTCACCAATACTTATTCAGATCCTTGTAACCCTGG
GTCCGGCCCCTATTATCATTTAAGGTATAAACCAATAACAGATGCATCTT
GTACTGGAATCGAGGCTTATTATGAATTTGATGAAACACTGGGTACGATT
AAGCATCATTGTTCTGGTCTTTTTCTTATCAAATACATAGGATACGTGAC
GCTTCAACCGGAAAGCTCACTTTCTGGCTCTTTACTGACTAATGAAGTTT
ATCGTTGGCGGAAAAACTCTCGGATGCTAAAGGAGAAAAGTTTTTGGAAA
AAGAAAAGTTGTATTACATTGAATTACTGTTTTATGAACATTTTGGCGGT
GATTGGTTAATTTGTTCCATGATTCGACCTGGTGATGTTGATCGAATAAT
TGTATCGTCAGATCATTTGTACCCTCTACCTTGATTGTTCATCCCGTCAA
ATTCGAAATGATGCATACAACAATCTCAAATTTCGACAATTTCGAATCTG
AATTTAGAAGTAGATTTGCTAACGGTTACCAAAAGACAGTCTATCAATCA
GATTTCAATATCTACCCGTCAATGGGTGACACTTATGCTGTTCGGATGCA
AGCTTTATTTTCACCGGACGTTACTGGGACATACTCTTTTTGGCTAAGAG
GCGATGACTATGCTTTACTCTTTATCGGCGAAGATGAAACTCCTGCCAGC
AGAAAGTTTGTTGCTAAAAGACCAAACAACTACGCTTATTATGCTACATA
ATTTTTTGGATCATAACCATCAAGCTTTTTATCCGTATAACGGCCTATCC
GATGGGACATGGACTCGGTACACATCTTATAACGTCTTACCTGGAGCTGG
CTCTACAATCGTCCTGGACAGAAATGAAGCTGGCCAGAATTTTTTTACTT
TTAATGGTTCTAAAGATCCATCTTATAAATGCTCACAATATACTTCGTCT
TGCTGACCAACGTTCTGCAAAATTCCTTCTTCGACATGATGGTAAAGTAC
CGAACAGAGAACCATATATTGAATTCAAAACTGATTCCGTTGAAGTTTGT
ATGGATAGATGTGTGGCAGGTGCCCCATGTAAATCAATCAATTATAACTC
AACTCTCCAAACCTGTCAACATGTTGACTACGATATTAATGACGGGAAAG
ATTACAGAACAAAGCCGGGATGGCAGCACTACGACACCGGAAAAACCCAA
CTGACACGGATCTTGGATGGAACACAAAATTATTGTGTCACCAATACTTA
TTCAGATCCTTGTAACCCTGGGTCCGGCCCCTATTATCATTTAAGGTATA
AACCAATAACAGATGCATCTTGTACTGGAATCGAGGCTTATTATGAATTT
GATGAAACACTGGGTACGATTAAGCATCATTGTTCTGGTCTTTTTCTTAT
CAAATACATAGGATACGTGACGCTTCAACCGGAAAGCTCACTTTCTGGCT
CTTTACTGACTAATGAAGTTTATCGTTGGCGGAAAAACTCTCGGATGCTA
AAGGAGAAAAGTTTTTGGAAAAAGAAAAGTTGTATTACATTGAATTACTG
TTTTATGAACATTTTGGCGGTGATTGGTTAATTTGTTCCATGATTCGACC
TGGTGATGTTGATCGAATAATTGTATCGTCAGATCATTTGTACCCTCTAC
CTTGATTGTTCATCCCGTCAAATTCGAAATGATGCATACAACAATCTCAA
ATTTCGACAATTTCGAATCTGAATTTAGAAGTAGATTTGCTAACGGTTAC
CAAAAGACAGTCTATCAATCAGATTTCAATATCTACCCGTCAATGGGTGA
CACTTATGCTGTTCGGATGCAAGCTTTATTTTCACCGGACGTTACTGGGA
CATACTCTTTTTGGCTAAGAGGCGATGACTATGCTTTACTCTTTATCGGC
GAAGATGAAACTCCTGCCAGCAGAAAGTTTGTTGCTAAAAGACCAAACAA
CTACGCTTATTATGCTACATAATTTTTTGGATCATAACCATCAAGCTTTT
TATCCGTATAACGGCCTATCCGATGGGACATGGACTCGGTACACATCTTA
TAACGTCTTACCTGGAGCTGGCTCTACAATCGTCCTGGACAGAAATGAAG
CTGGCCAGAATTTTTTTACTTTTAATGGTTCTAAAGATCCATCTTATAAA
TGCTCACAATATACTTCGTCTTGCTGACCAACGTTCTGCAAAATTCCTTC
TTCGACATGATGGTAAAGTACCGAACAGAGAACCATATATTGAATTCAAA
ACTGATTCCGTTGAAGTTTGTATGGATAGATGTGTGGCAGGTGCCCCATG
TAAATCAATCAATTATAACTCAACTCTCCAAACCTGTCAACATGTTGACT
ACGATATTAATGACGGGAAAGATTACAGAACAAAGCCGGGATGGCAGCAC
TACGACACCGGAAAAACCCAACTGACACGGATCTTGGATGGAACACAAAA
TTATTGTGTCACCAATACTTATTCAGATCCTTGTAACCCTGGGTCCGGCC
CCTATTATCATTTAAGGTATAAACCAATAACAGATGCATCTTGTACTGGA
ATCGAGGCTTATTATGAATTTGATGAAACACTGGGTACGATTAAGCATCA
TTGTTCTGGTCTTTTTCTTATCAAATACATAGGATACGTGACGCTTCAAC
CGGAAAGCTCACTTTCTGGCTCTTTACTGACTAATGAAGTTTATCGTTGG
CGGAAAAACTCTCGGATGCTAAAGGAGAAAAGTTTTTGGAAAAAGAAAAG
TTGTATTACATTGAATTACTGTTTTATGAACATTTTGGCGGTGATTGGTT
AATTTGTTCCATGATTCGACCTGGTGATGTTGATCGAATAATTGTATCGT
CAGATCATTTGTACCCTCTACCTTGATTGTTCATCCCGTCAAATTCGAAA
TGATGCATACAACAATCTCAAATTTCGACAATTTCGAATCTGAATTTAGA
AGTAGATTTGCTAACGGTTACCAAAAGACAGTCTATCAATCAGATTTCAA
TATCTACCCGTCAATGGGTGACACTTATGCTGTTCGGATGCAAGCTTTAT
TTTCACCGGACGTTACTGGGACATACTCTTTTTGGCTAAGAGGCGATGAC
TATGCTTTACTCTTTATCGGCGAAGATGAAACTCCTGCCAGCAGAAAGTT
TGTTGCTAAAAGACCAAACAACTACGCTTATTATGCTACATAATTTTTTG
GATCATAACCATCAAGCTTTTTATCCGTATAACGGCCTATCCGATGGGAC
ATGGACTCGGTACACATCTTATAACGTCTTACCTGGAGCTGGCTCTACAA
TCGTCCTGGACAGAAATGAAGCTGGCCAGAATTTTTTTACTTTTAATGGT
TCTAAAGATCCATCTTATAAATGCTCACAATATACTTCGTCTTGCTGACC
AACGTTCTGCAAAATTCCTTCTTCGACATGATGGTAAAGTACCGAACAGA
GAACCATATATTGAATTCAAAACTGATTCCGTTGAAGTTTGTATGGATAG
ATGTGTGGCAGGTGCCCCATGTAAATCAATCAATTATAACTCAACTCTCC
AAACCTGTCAACATGTTGACTACGATATTAATGACGGGAAAGATTACAGA
ACAAAGCCGGGATGGCAGCACTACGACACCGGAAAAACCCAACTGACACG
GATCTTGGATGGAACACAAAATTATTGTGTCACCAATACTTATTCAGATC
CTTGTAACCCTGGGTCCGGCCCCTATTATCATTTAAGGTATAAACCAATA
ACAGATGCATCTTGTACTGGAATCGAGGCTTATTATGAATTTGATGAAAC
ACTGGGTACGATTAAGCATCATTGTTCTGGTCTTTTTCTTATCAAATACA
TAGGATACGTGACGCTTCAACCGGAAAGCTCACTTTCTGGCTCTTTACTG
ACTAATGAAGTTTATCGTTGGCGGAAAAACTCTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036879XLOC_036879Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058546-exon-scaffold_311-1575043694:767323..768019TCONS_00058546-exon-scaffold_311-1575043694:767323..768019Clytia hemisphaericaexon
TCONS_00058546-exon-scaffold_311-1575043694:766309..766434TCONS_00058546-exon-scaffold_311-1575043694:766309..766434Clytia hemisphaericaexon
TCONS_00058546-exon-scaffold_311-1575043694:764953..765265TCONS_00058546-exon-scaffold_311-1575043694:764953..765265Clytia hemisphaericaexon
TCONS_00058546-exon-scaffold_311-1575043694:763257..763487TCONS_00058546-exon-scaffold_311-1575043694:763257..763487Clytia hemisphaericaexon
TCONS_00058546-exon-scaffold_311-1510915933:767323..768019TCONS_00058546-exon-scaffold_311-1510915933:767323..768019Clytia hemisphaericaexon
TCONS_00058546-exon-scaffold_311-1510915933:766309..766434TCONS_00058546-exon-scaffold_311-1510915933:766309..766434Clytia hemisphaericaexon
TCONS_00058546-exon-scaffold_311-1510915933:764953..765265TCONS_00058546-exon-scaffold_311-1510915933:764953..765265Clytia hemisphaericaexon
TCONS_00058546-exon-scaffold_311-1510915933:763257..763487TCONS_00058546-exon-scaffold_311-1510915933:763257..763487Clytia hemisphaericaexon
TCONS_00058546-exon-scaffold_311-1491911889:767323..768019TCONS_00058546-exon-scaffold_311-1491911889:767323..768019Clytia hemisphaericaexon
TCONS_00058546-exon-scaffold_311-1491911889:766309..766434TCONS_00058546-exon-scaffold_311-1491911889:766309..766434Clytia hemisphaericaexon
TCONS_00058546-exon-scaffold_311-1491911889:764953..765265TCONS_00058546-exon-scaffold_311-1491911889:764953..765265Clytia hemisphaericaexon
TCONS_00058546-exon-scaffold_311-1491911889:763257..763487TCONS_00058546-exon-scaffold_311-1491911889:763257..763487Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058546-proteinTCONS_00058546-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_311supercontigscaffold_311:763257..768019 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

min expression (0 tpm) - - (8.90459 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0.254175 0.0979449 0 0.0368753 0 0.159894 0.279355 0.0408083 4.04195 3.47031 0.208761 0.317379 0.148301 0.282881 6.83926 8.90459 0.17773 0.260071 0.0702558 0.095809 0.888129 1.50463 0.546124 0.269002 0 0.069291
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR011658PA14_dom
IPR008979Galactose-bd-like
IPR003609Pan_app
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00058546 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
ZOOM
x 1
POSITION
0
20040060080010001200Sequence
Match NameE-valueIdentityDescription
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