Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00058622 ID=TCONS_00058622|Name=TCONS_00058622|organism=Clytia hemisphaerica|type=transcript|length=1041bp ATGGAAACCATATTTAAATGacatttaaaaatataaaatttacaaAGCTT ATGAACCCAACttctaaaattaaaattgtTCATTTATCTCCTCTTTTTAT CCCTTGTTGAGAAATATACACTGGGATACGCAAAGACAGGGGTGTTCAGT TGGTTTTCTTGCTCCTAAATAAAAAGTACCAAAGGTGTTTTTTATCACGg tcttttttgtgatttttttgcacacatTATTAGCTGATGCGATAAGTGTA CCGTTGGATAGCTAAACCTTCTTACCCCCGTAAAAAATCTCCTATCGCCA CTTTACAACGAAGAAAGTCCGACACTTTGGCTAGGTTACTTTAATTTTTA GGCGCTCAGTATCAAAGTCTTAATCTTTTGTCCATTCACTTATACAtagc aaaaaaatcattttttgccGGTATGTCCGTAATAAACAGCGGAACGATCC CGGAAATACGCCATGAATATTTTACCAGGGATGAGAAAGTTTAACCATCC TACGATACTCATTTTGTTCACGATATTCGATCCCTCTTAAAAACATCGCA ATCTTCCGAATCTTTGGTCGTTCTAAATTCTATCCAAATTGAATTACAAA CTTCCAACTAAACAATTTTAGTCGAATCTAATAACGTCAGCATCTTTGAC AACTACACGACGTCGCACTTTTCACTGTATGATATTTCGTCTGAAGGTAT TTACAGTTCAACATTATGGTTACTTCGACATATTCCGTAACTTTACAACA CCATACATTTTCTTGTAAATGGATTTCTAATTTCTTATTCTTTTCTGTTT CATGATAAGGTGAATGACACGAAATACATGCACCTAAACAAGTGCTTATC TCTACTGTCACGGGTTTGCATTCAGGTAATTTGACGTCTAAATTGAACGC TTGTAAGTTACATTTTTGTTTACGTTTAACATGTGCTACAAGATTTCGTC CTTGAACGtattgtttgttgtttatgttgaaaaaaattatgtttattATC ATCAATATTTGTTCGATCTTCATGTTCGAAGCTTTTTCTTG Run BLAST on NCBI protein sequence of TCONS_00058622-protein >TCONS_00058622-protein ID=TCONS_00058622-protein|Name=TCONS_00058622-protein|organism=Clytia hemisphaerica|type=polypeptide|length=134bp
QEKASNMKIEQILMIINIIFFNINNKQYVQGRNLVAHVKRKQKCNLQAFN LDVKLPECKPVTVEISTCLGACISCHSPYHETEKNKKLEIHLQENVWCCK VTEYVEVTIMLNCKYLQTKYHTVKSATSCSCQRC Run BLAST on NCBI transcript from alignment at scaffold_311:859928..860968 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00058622 ID=TCONS_00058622|Name=TCONS_00058622|organism=Clytia hemisphaerica|type=transcript|length=1041bp|location=Sequence derived from alignment at scaffold_311:859928..860968 (Clytia hemisphaerica) CAAGAAAAAGCTTCGAACATGAAGATCGAACAAATATTGATGATaataaa
cataatttttttcaacataaacaacaaacaataCGTTCAAGGACGAAATC
TTGTAGCACATGTTAAACGTAAACAAAAATGTAACTTACAAGCGTTCAAT
TTAGACGTCAAATTACCTGAATGCAAACCCGTGACAGTAGAGATAAGCAC
TTGTTTAGGTGCATGTATTTCGTGTCATTCACCTTATCATGAAACAGAAA
AGAATAAGAAATTAGAAATCCATTTACAAGAAAATGTATGGTGTTGTAAA
GTTACGGAATATGTCGAAGTAACCATAATGTTGAACTGTAAATACCTTCA
GACGAAATATCATACAGTGAAAAGTGCGACGTCGTGTAGTTGTCAAAGAT
GCTGACGTTATTAGATTCGACTAAAATTGTTTAGTTGGAAGTTTGTAATT
CAATTTGGATAGAATTTAGAACGACCAAAGATTCGGAAGATTGCGATGTT
TTTAAGAGGGATCGAATATCGTGAACAAAATGAGTATCGTAGGATGGTTA
AACTTTCTCATCCCTGGTAAAATATTCATGGCGTATTTCCGGGATCGTTC
CGCTGTTTATTACGGACATACCggcaaaaaatgatttttttgctaTGTAT
AAGTGAATGGACAAAAGATTAAGACTTTGATACTGAGCGCCTAAAAATTA
AAGTAACCTAGCCAAAGTGTCGGACTTTCTTCGTTGTAAAGTGGCGATAG
GAGATTTTTTACGGGGGTAAGAAGGTTTAGCTATCCAACGGTACACTTAT
CGCATCAGCTAATAatgtgtgcaaaaaaatcacaaaaaagacCGTGATAA
AAAACACCTTTGGTACTTTTTATTTAGGAGCAAGAAAACCAACTGAACAC
CCCTGTCTTTGCGTATCCCAGTGTATATTTCTCAACAAGGGATAAAAAGA
GGAGATAAATGAacaattttaattttagaaGTTGGGTTCATAAGCTttgt
aaattttatatttttaaatgtCATTTAAATATGGTTTCCAT Coding sequence (CDS) from alignment at scaffold_311:859928..860968 >TCONS_00058622 ID=TCONS_00058622|Name=TCONS_00058622|organism=Clytia hemisphaerica|type=CDS|length=405bp|location=Sequence derived from alignment at scaffold_311:859928..860968 (Clytia hemisphaerica) CAAGAAAAAGCTTCGAACATGAAGATCGAACAAATATTGATGATaataaa cataatttttttcaacataaacaacaaacaataCGTTCAAGGACGAAATC TTGTAGCACATGTTAAACGTAAACAAAAATGTAACTTACAAGCGTTCAAT TTAGACGTCAAATTACCTGAATGCAAACCCGTGACAGTAGAGATAAGCAC TTGTTTAGGTGCATGTATTTCGTGTCATTCACCTTATCATGAAACAGAAA AGAATAAGAAATTAGAAATCCATTTACAAGAAAATGTATGGTGTTGTAAA GTTACGGAATATGTCGAAGTAACCATAATGTTGAACTGTAAATACCTTCA GACGAAATATCATACAGTGAAAAGTGCGACGTCGTGTAGTTGTCAAAGAT GCTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00058622-exon-scaffold_311-1491911889:859928..860968 | TCONS_00058622-exon-scaffold_311-1491911889:859928..860968 | Clytia hemisphaerica | exon |
TCONS_00058622-exon-scaffold_311-1510915933:859928..860968 | TCONS_00058622-exon-scaffold_311-1510915933:859928..860968 | Clytia hemisphaerica | exon |
TCONS_00058622-exon-scaffold_311-1575043694:859928..860968 | TCONS_00058622-exon-scaffold_311-1575043694:859928..860968 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_311 | supercontig | scaffold_311:859928..860968 . |
Annotated Terms
The following terms have been associated with this transcript:
Blast
The following BLAST results are available for this feature:
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