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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00058632 ID=TCONS_00058632|Name=TCONS_00058632|organism=Clytia hemisphaerica|type=transcript|length=1333bp
CAAAGACAATAAAGAAGGATTACCTGGTATATCttattgaatttgattca
tCTTCTTGATATTGattctaaacaaaaagaatGGTGCTAATTGATTGTAA
AACCAttgcaaaatcttaaattttataatttttcaccctgtgcaaatgca
cagagttccaaaaacCCAGTGTATTTGCACCGGGTTTTCGCACTACTTTC
GATTTCGACCCGTTGCAAATGCAACGTAGCGGACtccgtgcaaatgcaag
gatatTTGCCTGACTGTTCGACGACCCTTCGACTACCCTANgtgtagtaa
ctgttttcataacttctgaatacagtaccaccacggtagtaagtgtcata
ctgtcttgtagtaactgtgtgcccccccccctgtatagACTGTAACTTCG
TtagtctttattttctttatgggCGTTGTTTTTATTCTCTTGCGCACATA
CACCACTGTCTCTGTgccgccccggtggagctttttccttcagtgtggat
gaaaatttctatctaatCGTAGTGTCCAGNGTAATACGGTGTATACCGTC
GTTTTACATATTTCCTTTCAGTTTCCCACACTAAGAAGAAGATTCCTGTG
AAAGACCAGAACTCCGGGTAGTTAAAAAAACAAGCTTCGAAAAATTATTA
GCCCTACCCAGCAGGCTCTCCCGTATGCACAGTACAATGTACGGCGGCCT
GGTTCGATTAAACTTTGCTGTTGAAATAAACGAGGGAATAAAGAGATCGA
AGCCTTCGATGACTAGTCGAAGTAATCGAATGGTAATCGAATGGTAATCG
AAGTAACCTAATAAATCTGACAAACCGATAGTAATCGAAGagtaatcgaa
ttaatcgaagaGTCATTGAAGGGTCATCGAACATTCATCGAATGGTAATC
GAAGAAGATGCAGATATTCTGAGGCTGGTGAGTATTcgattatttcaaaa
tttcggcGTAATCGATAAGTCATCATTCGATGACGTTCGATTAtattcga
ttattatcgattacaatcgaacgttcggaacattcgattagtaccgtctg
gagTTTTTGAGGTTACGGATGGATTGTGGGAGGGCATTAAATAGTCTGGG
ACCTTCTTCTGACAGGGAGTCTCTCCATATGTTTTTTTGCCTTATGTTCA
CCTCTTTTAGATAACATTTTCTACCCAGTCTCTGGTTATCGTAACTGAAG
AtgccatctttgttttcagTATAGTTAGAATTTGGTACAAGCTGTTCTAG
GATGCTCCAGGTGTAGATAATCCTGTATCTTTCTCTGCGCCGCTCCAGGC
TGTATAGTTTAAGTTCTTTGAGCTTCTCCCAAT Run BLAST on NCBI transcript from alignment at scaffold_311:1114691..1116023 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00058632 ID=TCONS_00058632|Name=TCONS_00058632|organism=Clytia hemisphaerica|type=transcript|length=1333bp|location=Sequence derived from alignment at scaffold_311:1114691..1116023 (Clytia hemisphaerica)
ATTGGGAGAAGCTCAAAGAACTTAAACTATACAGCCTGGAGCGGCGCAGA
GAAAGATACAGGATTATCTACACCTGGAGCATCCTAGAACAGCTTGTACC
AAATTCTAACTATActgaaaacaaagatggcaTCTTCAGTTACGATAACC
AGAGACTGGGTAGAAAATGTTATCTAAAAGAGGTGAACATAAGGCAAAAA
AACATATGGAGAGACTCCCTGTCAGAAGAAGGTCCCAGACTATTTAATGC
CCTCCCACAATCCATCCGTAACCTCAAAAActccagacggtactaatcga
atgttccgaacgttcgattgtaatcgataataatcgaataTAATCGAACG
TCATCGAATGATGACTTATCGATTACgccgaaattttgaaataatcgAAT
ACTCACCAGCCTCAGAATATCTGCATCTTCTTCGATTACCATTCGATGAA
TGTTCGATGACCCTTCAATGACtcttcgattaattcgattactCTTCGAT
TACTATCGGTTTGTCAGATTTATTAGGTTACTTCGATTACCATTCGATTA
CCATTCGATTACTTCGACTAGTCATCGAAGGCTTCGATCTCTTTATTCCC
TCGTTTATTTCAACAGCAAAGTTTAATCGAACCAGGCCGCCGTACATTGT
ACTGTGCATACGGGAGAGCCTGCTGGGTAGGGCTAATAATTTTTCGAAGC
TTGTTTTTTTAACTACCCGGAGTTCTGGTCTTTCACAGGAATCTTCTTCT
TAGTGTGGGAAACTGAAAGGAAATATGTAAAACGACGGTATACACCGTAT
TACNCTGGACACTACGattagatagaaattttcatccacactgaaggaaa
aagctccaccggggcggcACAGAGACAGTGGTGTATGTGCGCAAGAGAAT
AAAAACAACGcccataaagaaaataaagactaACGAAGTTACAGTctata
caggggggggggcacacagttactacaagacagtatgacacttactaccg
tggtggtactgtattcagaagttatgaaaacagttactacacNTAGGGTA
GTCGAAGGGTCGTCGAACAGTCAGGCAAatatccttgcatttgcacggaG
TCCGCTACGTTGCATTTGCAACGGGTCGAAATCGAAAGTAGTGCGAAAAC
CCGGTGCAAATACACTGGgtttttggaactctgtgcatttgcacagggtg
aaaaattataaaatttaagattttgcaaTGGTTTTACAATCAATTAGCAC
CattctttttgtttagaatCAATATCAAGAAGatgaatcaaattcaataa
GATATACCAGGTAATCCTTCTTTATTGTCTTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00058632-exon-scaffold_311-1491911889:1114691..1116023 | TCONS_00058632-exon-scaffold_311-1491911889:1114691..1116023 | Clytia hemisphaerica | exon |
| TCONS_00058632-exon-scaffold_311-1510915933:1114691..1116023 | TCONS_00058632-exon-scaffold_311-1510915933:1114691..1116023 | Clytia hemisphaerica | exon |
| TCONS_00058632-exon-scaffold_311-1575043694:1114691..1116023 | TCONS_00058632-exon-scaffold_311-1575043694:1114691..1116023 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_311 | supercontig | scaffold_311:1114691..1116023 . |
Blast
The following BLAST results are available for this feature:
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