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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00058667 ID=TCONS_00058667|Name=TCONS_00058667|organism=Clytia hemisphaerica|type=transcript|length=537bp
GGTACCGAAGAGAGCCAACAAGAAAATGCTCTCGAAGATCAGAAACAaca
agatgaagaagaagaccAATCACAAgacatgatgacgtcatcacaagaTG
ATCAAGATGTTATGGAGCAAGATGAAAGCCCATTGGACAAAGTCAAAGAT
GAAGAAGTACAGGTTACAGACCAGAACGACCCGCAACCAAGAAAAAGACG
TCGACGACGCCAACGAAGACGTCGAAGCCAACGACGAAGAAGTCAACGAA
GCCGACGAAGACAACACGGTTCTCGAAGACGAAACGGTTCCCGAAGACGA
CATGGTTTCCGAAGACGACACAGTGGATACCCATACGGCAGTTACCCTTA
GGGTGGTTACCCTTACGGCGAATATCCTTATGGCGAATATCCTCACAACT
AGCGCTACGGAAAATAATTCATTTCACACACGAAAatgataatttatttt
tattgggAATGGTGTTTGATGCCTGATTTTTTGTAATATTAggaaaaaat
ttttatcttGGTAACTCGTaagaaatatcattttttc Run BLAST on NCBI transcript from alignment at scaffold_312:203532..204489+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00058667 ID=TCONS_00058667|Name=TCONS_00058667|organism=Clytia hemisphaerica|type=transcript|length=958bp|location=Sequence derived from alignment at scaffold_312:203532..204489+ (Clytia hemisphaerica)
GGTACCGAAGAGAGCCAACAAGAAAATGCTCTCGAAGATCAGAAACAaca
agatgaagaagaagaccAATCACAAgacatgatgacgtcatcacaagaTG
ATCAAGATGTTATGGAGCAAGATGAAAGCCCATTGGACAAAGTCAAAGAT
GAAGAAGTACAGGTTACAGGTATGTTGCAAATACTACCATccatttgttt
gtttgttggaGTTTTTTAATCAGTTTCTTGTTAAAgtggttcttattttt
tgttcacttgaATCCTTTAGTCTAGGCCTTAAATTTCGGTTTAGTGGTCA
GCTTAGCCTTATCcatttcttaaaatctaatctAAAATCTAATCCTCTAG
TAGTTACTATGCTACGGTCTAAATTAGGCATCATGTAAGTTTATTTTCAA
GACTTTAAAGTGGCGATTCAAATGTTAGCCTTGAAGTTATCGATTCTTCT
CTAGGTTATCTTTAAAAATGATTCCCATACCAGTTTGATGCTTGACCCTA
GTTTTGTTATTCATAAGAAACTTTAATATGATAGATAATTGTGAGTAATC
CGACCAAACGATATTTGTTTAAATTCTTTCAATACAGCAGACCAGAACGA
CCCGCAACCAAGAAAAAGACGTCGACGACGCCAACGAAGACGTCGAAGCC
AACGACGAAGAAGTCAACGAAGCCGACGAAGACAACACGGTTCTCGAAGA
CGAAACGGTTCCCGAAGACGACATGGTTTCCGAAGACGACACAGTGGATA
CCCATACGGCAGTTACCCTTAGGGTGGTTACCCTTACGGCGAATATCCTT
ATGGCGAATATCCTCACAACTAGCGCTACGGAAAATAATTCATTTCACAC
ACGAAAatgataatttatttttattgggAATGGTGTTTGATGCCTGATTT
TTTGTAATATTAggaaaaaatttttatcttGGTAACTCGTaagaaatatc
attttttc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00058667-exon-scaffold_312-1491911889:203532..203700 | TCONS_00058667-exon-scaffold_312-1491911889:203532..203700 | Clytia hemisphaerica | exon |
| TCONS_00058667-exon-scaffold_312-1510915933:203532..203700 | TCONS_00058667-exon-scaffold_312-1510915933:203532..203700 | Clytia hemisphaerica | exon |
| TCONS_00058667-exon-scaffold_312-1575043694:203532..203700 | TCONS_00058667-exon-scaffold_312-1575043694:203532..203700 | Clytia hemisphaerica | exon |
| TCONS_00058667-exon-scaffold_312-1491911889:204122..204489 | TCONS_00058667-exon-scaffold_312-1491911889:204122..204489 | Clytia hemisphaerica | exon |
| TCONS_00058667-exon-scaffold_312-1510915933:204122..204489 | TCONS_00058667-exon-scaffold_312-1510915933:204122..204489 | Clytia hemisphaerica | exon |
| TCONS_00058667-exon-scaffold_312-1575043694:204122..204489 | TCONS_00058667-exon-scaffold_312-1575043694:204122..204489 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_312 | supercontig | scaffold_312:203532..204489 + |
Blast
The following BLAST results are available for this feature:
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