TCONS_00058719 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058719
Unique NameTCONS_00058719
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2940

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058719 ID=TCONS_00058719|Name=TCONS_00058719|organism=Clytia hemisphaerica|type=transcript|length=2940bp
AAAGGGTCCTTTTAATTATCTTTTTTGTTTAGATGTAAATACAAGATTTA
AAATGTTCTAGTCCATATCAAAAGCAAACTCCATGACTAgaactaaaaaa
acaaacacaattcAAGATGActtaaactcaaaatttccaaataatgGACA
GCTACTCAAGTGATAGTAGCTTTAGCACTTTCCAAAGTGAAACCAGCAGT
CTCAGTGATGCAAATTCGTCACACTTATTTTCTCAACGCAGTAGTGGAAG
TGCAAGTGGAGGGGGCAAGCAAACAAATGTCAAGTGTCGTTATTTTATGA
ACAATGGGTATTGTTTTTATGGTGACCAATGTCAATTTTCACATATCAGG
CCTGGTGGTGCTAGTCCTTTGACGCACCAAAATCATGAAAGCTATGCAAG
TACAAGTGAAGATGATTCTGCTTTCCTACCATCTGCACCAACTTTTGTTC
CCAAACAACCGCAATCACCTCCACAACCACCTCCACAACCACAACCACAa
ccacaaccacaacaacagcaacagcaTCAGCATCAGCATCAACCACAATC
GCTgcaatcaaaatttaatgatcatcattcaaaaagacttttcaacAAAC
AATTTCCTTCGTCAAATAAACCTCCAAGCAATACTGATTTGTTAAATCAG
CAATTTCGAAGAATGAGGATAATGCAACAAGCCAATagtAAAGATTCTCA
AGAGAACTTTCAACAAAATGATCGAGGGAACAAAACTCTGCCGCATCTAC
AGATACCTTCCAACAAATTTGATCAAACATCTTTCTTTATGTCTCAGCAA
ATGAGAATGGACTCccagaaaatattgaaaactatCACAGCCTTCATCCT
TTAGAAGATATCAAAAGCCAAATTTCAgGACAAAGACTCTTTGGATATAC
TTCAACTTGTTATAGAGTTGTCAATTCTAAAGATGGCCTCCATTACTGTA
TGAGAAGGATACATGGTTTTCGCTTATTGAATCCAAAGGCTGTGAGCAGT
GTTGAGAAATGGAAGAAAGTTAGCAATTCAAATATTGTGCCTTTGAAAGA
AGCTTTCTCATCTAAAGCATTTAATGACACATctttgatTTTCATCTATC
AATATTACCCTGGTGCAGAGACAGTAATGGCAAGacatttcaaaaatatc
aatacaaCAAGAAGTCCACACTCTGAATCAGCCTTCTGGCATGGAGGGAA
TCAGAATTCCTCTGGATCAAGTTTTGGTGGTAAAGTGACACAAAAAGTGA
TGCCTGAGCGTTTGATATGGAGCTATGTGATTCAATTAACTGCTGCAATT
AGGCAGATACACAGTCATGGATTAAGTTGTCGTGCTATTGACCCATCCAA
GGTTCTGTTGATAGGAAACTCAAGGTTGCGTTTGAATTGTCCTGGCATTC
TGGATGTGCTAACAGATAATGAACCTACCTCACCTGCTATGGTCGTCCAT
TATCAACAAGAGGATTTGGTTGCACTTGGGAAATTGATTCTAGCTTTAGC
ATGCTATTCAATGGAATCTGTCCAACGTGAATCGATCCAGGCGTCAATAG
AGTTTGTTGCAAGGAACTATTCTAAAGACCTCAAAACCCTCATATGGCAC
TTGTTGAGCAGCAAAGTGACTTCAAATCAACATTCCATTAATGACGTCAT
GCCAATGATCGGAGCACGCTTTTACAGTCAACTAGACGTCACTCAATCGC
GTTCAGATCTTTTGGAAAACGAGCTGTCTAAGGAGATGGACAATGGTCGA
TTACTGCGGATCCTTGCCAAACTGGGAACAATTATCGAGAGATCAGAGTT
GAATATGGACGCTGAATGGTCAGAGACTGGAGACCGATATTTACTGAAAC
TATTTCGAGACTATTTGTTTCATCAAGTTACTGAATCTGGTGCAGCCTGG
ATTGATTTTGCACATATTGTGTCCACGCTTAACAAGCTCGACGCTGGCTC
GTCAGATCGTATCTGCCTCAGTTCTCGAGATGAATTATCTATTCTTGTCG
TGTCTTATCATGACCTGAAAGCTTGCTTAGAAACCGCGTTTTCAGAGCTC
ATTCAATCTTCAGAAATGTCTTAACATTCTAacgaaacaaaatacaaaat
ggtGGTCCATGGGTATATTTATGATATATTTGCATTGTGAAAAAATGCGT
ACAACGATATAATTTGAaggagaaaaaaggaaaactgcgtctaatttttt
tttgattgaacATACACATACAAAAAACTAGCTATGGaagaagtttttta
ttttatttttatttttcagtttattGTAAAAtaacaagtcttgtactttt
TTGCCcttgtatatttattttttcatcccGTAACACAAAGAACTTTTTAG
GGTACTTTAAAGAACGCGAGTACTATTACCTCgtataaaaaagtgaatta
atttttgttgcattttttCATTGGACGGAGAAAACTATATAATGTGTATA
TTACGTTCTGTAATTTTTATCATGGATTATTTAGTAGCATAtgtacaaaa
atacaatttattATAGTATGATATTGTATTTGTATTAAGATTTTGATCCG
TAAAACTTTATCTAGcgtacatttttcaaaaagcttttcgGAATCGCACA
CAGCTCCACGCTATTTTCTCGGTTTTTCAATAGCGAAATAATTCacaatt
aatttcaacttttctatTACAGCCCTAAAACTGATAGATTACGGACTTTT
TCTCGAATCTGTATCTTCATATATTTTGtggaaataattaattttttggg
tCTTCTTTTATATAGATTATATTACATAgtcgatttttttgaaaaatagt
gtATAATGAACCCTCGCCAAAACGAAAATTGAGATGAAACGTTTACATAT
TtgtaaaatgtaatttttagtACGATCTCATTAATAAGATATtaagaaat
acaaaaaataccATAAACGGAtaatttaaaaacttaaaaa
Run BLAST on NCBI

transcript from alignment at scaffold_313:509732..521958+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058719 ID=TCONS_00058719|Name=TCONS_00058719|organism=Clytia hemisphaerica|type=transcript|length=12227bp|location=Sequence derived from alignment at scaffold_313:509732..521958+ (Clytia hemisphaerica)
AAAGGGTCCTTTTAATTATCTTTTTTGTTTAGATGTAAATACAAGATTTA AAATGTTCTAGTCCATATCAAAAGCAAACTCCATGACTAgaactaaaaaa acaaacacaattcAAGATGActtaaactcaaaatttccaaataatgGACA GCTACTCAAGTGATAGTAGCTTTAGCACTTTCCAAAGTGAAACCAGCAGT CTCAGTGATGCAAATTCGTCACACTTATTTTCTCAACGCAGTAGTGGAAG TGCAAGTGGAGGGGGCAAGCAAACAAATGTCAAGTGTCGTTATTTTATGA ACAATGGGTATTGTTTTTATGGTGACCAATGTCAATTTTCACATATCAGG CCTGGTGGTGCTAGTCCTTTGACGCACCAAAATCATGAAAGCTATGCAAG TACAAGTGAAGGTTGGCTTTCTTACTTACAAACAAACTTGATTCTAACTG ATTCTACCACTGAGCTGCTACTGCTACGAGTACTCTAATTGCACTGTGGG TCAAAACATTCCTAAATAGAAAATTTCGTTGAATCAACCAACATCAAGTA GTGTTACCATTAAGGTAACACTTTTCTGATAACTCCGATCAAAATTGGCT AAATCCtcggtttataaaggtcagcaCATAatcatggtttcagccccccc ccccccccccttttagggggggggggggaaaaaaaaatttttttttttcc cccccccccccccgaatagggggggggggggaaaaaaaaatttttttttt tcccccccccccccccgaatagggggggggggggaaaaaaaaattttttt ttttcccccccccccccccttgttaGGGATTGGGGGCTAAtattttgcaa ttctttggggttacctattcattggGGGTACCTAGCTGTTTTGATGGAGG CTCTTGGGGCTgtgtatattttccaaattaaacatttcaaaattttcaaa ttattcagtttttttacaCCAGCACCCAGTTTCCCCATCCGATTctcttg tttcttttgtttcccaTCACGTCATCTTttactatatttttcaaatgtga ttgtttttatttatagccgccatctttatagcataaaaacaaagcttttc tcatgcttcaatgggggcacctgaaaagtgggctgaaaccatgataGGTC GACACATAGATTGTTGTGTCTGGCATATTATTGTTGATAGTTAAACTTTT ACACAactgaaataaaagaaaagaaaaccagAAAGTTTATAAGAAGAGAA CCTTCCTTCCAATAAATCTTTAACCACAGTGATTTGTTTTACATTTTGTA GATGATTCTGCTTTCCTACCATCTGCACCAACTTTTGTTCCCAAACAACC GCAATCACCTCCACAACCACCTCCACAACCACAACCACAaccacaaccac aacaacagcaacagcaTCAGCATCAGCATCAACCACAATCGCTgcaatca aaatttaatgatcatcattcaaaaagacttttcaacAAACAATTTCCTTC GTCAAATAAACCTCCAAGCAATACTGATTTGTTAAATCAGCAATTTCGAA GAATGAGGATAATGCAACAAGCCAATGTAACTTGATTATGCTTTCTTTTG TACTGCTATTGGGCAGCCATCTTTTTAATCGCATCAGTACAGTTTTCGTT CATGTTCCCTATATTTTCTTTGCATCAAATGCAATCCTTTCTAACATGAC CATGTCAAGATAACCTTCTAAGACATCATCTTCcttttttatggtttttt tttttagagtAAAGATTCTCAAGAGAACTTTCAACAAAATGATCGAGGGA ACAAAACTCTGCCGCATCTACAGATACCTTCCAACAAATTTGATCAAACA TCTTTCTTTATGTCTCAGCAAATGAGAATGGTCTGTCTTatcatctttta ttttttatttattttttgtgtatCCTTTGAGTTTCTCCCATAGTCTCAAA GATATCTAAACTTAGTTGTTTGTCCATTGTTATTAGacaatcttcaattt tcatttactCTCAGGAATTACTCAAACAACGCTCAGTTCTGTTGTCAGAA AACAAAGATCTTGCTGGGCTTGGTAGGTTGAAATCTTCCTAGCAGTCTGC TCAACCAAATCTTCaagattgtttttttgcttgtttaatCTTGGTACAAA CTTTAATTTTCACCATTAATAAAAATGTACTCTTTCATCGTAGGACTCcc agaaaatattgaaaactatCACAGCCTTCATCCTTTAGAAGATATCAAAA GCCAAATTTCAGTAAGTTGGGCACTCTAAAGATTTCTGTCTGCATAGAAG AAATCTAAATACTAATTTCGagcaaaaaatagcaaaattttcaaataatg gGAGCTAATTTCCTTGAAATCATACCTCTAAGTCCCCAATAATGAGGTTA ATGTTAAAGTGAGGTTCCAAAGATAAGTAACAGCTGGTAAATCTTGTATT TTAGGCATCTCAGTCAACTTATTATTTAAGATtattaattaaaattaaaa tcgtAAAGAAAATACAGAACACAgaaaatcacaatttttttaaaagattc agtttttctcatttttcaggGACAAAGACTCTTTGGATATACTTCAACTT GTTATAGAGTTGTCAATTCTAAAGATGGCCTCCATTACTGTATGAGAAGG ATACATGGTAAGAagatattctattttttttgaaaaatctcacaAACTAG GGAAAACTTGATGCAATAAAGATTTTCTTTGCATAGTTTTTTTATCCTCA CGCTTTGATCTATTGTATTGTAATGTCTATATTTCGATTCCTTTTCAGGT TTTCGCTTATTGAATCCAAAGGCTGTGAGCAGTGTTGAGAAATGGAAGAA AGTTAGCAATTCAAATATTGTGCCTTTGAAAGAAGCTTTCTCATCTAAAG CATTTAATGACACATGTGAGTATTTGTAGTATTATTTCTTGAAAGTTGCT CTAAATTCAGTAAATTCAAgtaaaatacatatttttattaTGAGCACTCA CAAGATTCTTGGATAAAATTCCAGATTGATAGACACCTTGtttaattttc agctttgatTTTCATCTATCAATATTACCCTGGTGCAGAGACAGTAATGG CAAGacatttcaaaaatatcaatacaaCAAGAAGTCCACACTCTGAATCA GCCTTCTGGCATGGAGGGAATCAGAATTCCTCTGGATCAAGTTTTGGTGG TAAAGTGACACAAAAAGTGATGCCTGAGCGTTTGATATGGAGCTATGTGA TTCAATTAACTGCTGCAATTAGGCAGATACACAGTCATGGATTAAGTTGT CGTGCTATTGACCCATCCAAGGTTCTGTTGATAGGAAACTCAAGGTTTGT ACATGTGTCAACATTGAACTCTACTACACGTTACTATTAATTTTCTATTA TTAGTTTTTAAGTTTCATTATAGGCTTCTCTATATTCACTTCTACTCTTT CTTGCATAGTAAATCACTGGGAAAATTTTACACTTGGAcactttttcatc aaatcctttaaaatataaattttagttTAGAGAAATCTCtggaaatctct tttttttctaCAGTTTGAAACAAGCACCTTAAAACGTTTTATTGTTTATA AAACGTTTTATTGTTTATAAAACTTTACAAAGTtaaaattgaagtttttt ttgtttccagGTTGCGTTTGAATTGTCCTGGCATTCTGGATGTGCTAACA GATAATGAACCTACCTCACCTGCTATGGTCGTCCATTATCAAGTCTGAAT ACCCTTCATAAGATATAACTTTTATCTCTCATTATAAGATTTTACTAACC TCAGTTTTGTTggttatttttctttgtaaagccataaaaaatgtttctaa tGAAATGACTAACATCTGAacaatataatctgcagtgaAGACAAATACTT TTGCACATCGATTTTTATCCAAGTTGTAGaccaaattttctttaaagCTC ATAAGGTTGATTactttatttttctcttctttacTTTTTCAGCAAGAGGA TTTGGTTGCACTTGGGAAATTGATTCTAGCTTTAGCATGCTATTCAATGG AATCTGTCCAACGTGAATCGATCCAGGCGTCAATAGAGTTTGTTGCAAGG AACTATTCTAAAGACCTCAAAACCCTCATATGGTATACACTTTTTNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNTTCTCTGTCAGGCACAAATTACATCGTTTTGAGCCATTTACATAAGGA CGGGCGTGGTCAATTATTTCCCAGTTCAATTTAGGGGAGATATCCTTCAA TTGGAGGTCCCACACGTAGTTTGAAAGTTCGGTTGATTTCTTCTTGTCTT CATTCCTGAACGTATGTTTTTGCCTTCCTCGGTATCGATGAACGTATGTT TGTGGCCATACCAACGTTGTTTGAAAGAATTGGCAGTTAAACCAATGTAG TGTTTGCCTTCCTCGGTATCGAAAATTTAAATTGGCTCTGATTTCATTGA GCACTCTGCAgcatcaatcacaaacaaatcGATTCTTGGATATAATTTAA ATTAACTTTTTCCAAATTGATACACAGCTCGTTCAATTTTCAGCTTTGAT TTTCATCTATCAATATTACCCTGGTGCAGAGACTGTAATGGCAAGacatt tcaaaaatatcaatacaaCAAGAAGTCCCCACTCTGAATCAGCCTTCTGG CATGGAGGGAATCAAAATTCCTCTGGATCAAGTTTTGGTGGTAAAGTGAC ACAAAAAGTGATGCCTGAGCGTTTGATATGGAGTTATGTGATTCAATTAA CCGCTGCAATTAGGCAGATACACAGTCATGGATTAAGTTGCCGTGCTATT GACCCATCTAAGGTTCTGTTGATAGGAAATTCAAGGTTTGTACATGTGTC CATTGAACTCTACTACTCGTTACTATTAATTTTCTATTATTAGTTAAGTT TCATTATACCTGGCTTCTCTGTATTCACTTCTACTCTTTCTTGCAGTAAA TCACTGGGAAAATTTTACACTTTAACACTTTTTCACCAAATCCATtaaaa taccgggtgcgccacaaaaaaagtctctctctttaaaagtaattttctcg aaatctaaaaattttaaaagaactattcctattttattggaaagaagaaa aataaacttaaattttgatgggtcatttattgaattcaattcattagatc aaaagttatgctcacttgaataaaaaagttacttttgaaAAGTgcccaaa aacgttaaaaatcgacctatcaaattattcagaagcataattacatgata tcagtatttttgtttcagtcattaaaaatgataattagctatctaaatga ccttttgttatttaaaggaaggttgaatttcaatgaaaggaagaaaattc gtcaaaaaaggccaaaaaatctggtagaattcataaaaataNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNGTAGGACTCccagaaaatattgaaaactatCACAGCCTTCATCCTTT AGAAGATATCAAAAGCCAAATTTCAGTAAGTTGGGCACTCTAAAGATTTC TGTCTGCATAGAAGAAATCTAAATACTAATTTCGagcaaaaaatagcaaa attttcaaataatggGAGCTAATTTCCTTGAAATCATACCTCTAAGTCCC CAATAATGAGGTTAATGTTAAAGTGAGGTTCCAAAGATAAGTAACAGCTG GTAAATCTTGTATTTTAGGCATCTCAGTCAACTTATTATTTAAGATtatt aattaaaattaaaatcgtAAAGAAAATACAGAACACAgaaaatcacaatt tttttaaaagattcagtttttctcatttttcaggGACAAAGACTCTTTGG ATATACTTCAACTTGTTATAGAGTTGTCAATTCTAAAGATGGCCTCCATT ACTGTATGAGAAGGATACATGGTAAGAagatattctattttttttgaaaa atctcacaAACTAGGGAAAACTTGATGCAATAAAGATTTTCTTTGCATAG TTTTTTTATCCTCACGCTTTGATCTATTGTATTGTAATGTCTATATTTCG ATTCCTTTTCAGGTTTTCGCTTATTGAATCCAAAGGCTGTGAGCAGTGTT GAGAAATGGAAGAAAGTTAGCAATTCAAATATTGTGCCTTTGAAAGAAGC TTTCTCATCTAAAGCATTTAATGACACATGTGAGTATTTGTAGTACTTCT TGAAAGTTGCTCTAAATTCAGTAAAATACATATTTTGATTATGAGCACTC ATAAGATTCTTGgatataaattttaaaagttatctttcatcacaaaataa aaaagtacactACTCCGAGTTTCATGCTTACTGCACTTGTCAAatgtaca aataaaatgaatctGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtaatccagtcta gaaccaaaaatctgaggaaaatttcggtaaaactaaatcaaattaatttt gatgaagattttgaaccctttcgacccttcagtttcaaaattcatgtgTT AGGTTcatgaaaaatgctcttaatcatgtaattgcgattgccaaatttaa agtaaaaatttgataggtcgatttttaacgttttcgggcactttctgaaa gtaacatttttattcaattggacataacttttgatctaatgaatggaatt taataaatgacccatcaaaatttaagtctatctttcttctttccaatgaa ataggaatgattcttttaaaatttttagatttcgagaaaattagtttcaa agagagaaacttttttgtggcgcacccggtattacTAGTAGAGAATTCTC TAGAAATCTCTTTGTTCTACAGTTTGAAACAAGCATCTTAAAACGTTTTA AAgttgatgttttttttgtttctaggTTGCGTTTGAATTGTCCTGGCATT CTGGATGTGCTAACAGATAATGAACCTACCTCACCTGCTATGGTCGTCCA TTATCAAGTCTGAATACCCTTCATAAGATATAACTTTTATCTCTCATTAT AAGATTTTACTAACCTCAGTTTTGTTggttatttttctttgtaaagccat aaaaaatgtttctaatGAAATGACTAACATCTGAacaatataatctgcag tgaAGACAAATACTTTTGCACATCGATTTTTATCCAAGTTGTAGaccaaa ttttctttaaagCTCATAAGGTTGATTactttatttttctcttctttacT TTTTCAGCAAGAGGATTTGGTTGCACTTGGGAAATTGATTCTAGCTTTAG CATGCTATTCAATGGAATCTGTCCAACGTGAATCGATCCAGGCGTCAATA GAGTTTGTTGCAAGGAACTATTCTAAAGACCTCAAAACCCTCATATGGTA TACACTTTTTCCCATCATAGCTAATCTCGTAGAATTTTAGATATAGTAGA GAAACTGATAATTTTTAGGATGTTATTTATTTTCCTCATCTCAAGGATAG TTCTTTTTTAGGTGAAATTGTGTAATAGTAGAGGGAAATTTGTTcctttt tttgaggtcgctcgatttttttagtcaaagcacttgttatacatttttgg aaagctaaggggtaggggaatcaaaataacttgggtgccaaattaatgaa aattttagcttgagaaaacgtagacctgttgtatattttggaaagctctc aaaaaattaagattagagatatattgcaaatataggtgatttctgtacct aactagagatattaacccttaaaaacagtgtttttcagccagaaacagct ttTTTGTCCAGTTCTTGCGCTtttggaagctcaatatctcgagttaggta ctgaaatcacctatactcgcaatatatcactaatcttaattttctgagag ctttccaaaaatatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNcccaagttattttgattcccctaccccttagctttccaaaaatgt ataacaagtgctttgactaaaaaaatcgagcgattttacaaatttcccgc TACTATAATTTTAGGCcttttaaatagatttttaTACGCCATTGCTCTCC CGGAAAGTGCACTATATTTCCTATGTCTTTATTTTAGGCACTTGTTGAGC AGCAAAGTGACTTCAAATCAACATTCCATTAATGACGTCATGCCAATGAT CGGAGCACGCTTTTACAGTCAACTAGACGTCACTCAATCGCGTTCAGATC TTTTGGAAAACGAGCTGTCTAAGGTTTACTCATTTTTTATCAAAGGAGAC TTGGTATTTCATTTTGTCATTTATTTCGGATTTTTTTTAGCTTGTATTCT TTCATGCTTTCtataattttaaataatttatttgtTTAAAGGAGATGGAC AATGGTCGATTACTGCGGATCCTTGCCAAACTGGGAACAATTATCGAGAG ATCAGAGTTAGTCTAATTATTTGCTGCTGATttcaattatcaaaatattg cACTTGAAATTTGTTGACCagttgaaaattatttaaaacgaGCTTTTATT TGGGGATTTTATAAGTTTTCTGGTCAAGTTGGCAGTCATTCACCACATCT ACTTTCTTTACCATTGCAGGTTGAATATGGACGCTGAATGGTCAGAGACT GGAGACCGATATTTACTGAAACTATTTCGAGACTATTTGTTTCATCAAGT TACTGAATCTGGTGCAGCCTGGATTGATTTTGCACATATTGTGTCCACGC TTAACAAGGTACGTTTTgcaattgaattttaaatttctaagTCAATTCTT TATTGGTTCAGAAAATTTTACAGTTTCTTTTggtttcttttaaaatcaag cAATTTACCGTTTGAAATTTAGTGCTAACGTCATCAAaagagaaaacttt ttgaagatgAGATAAAAAAGAATGcttgtgaaattttaaaacaacagCTC AAGCCTCTGAAAAAGAAAACCTCTCAGGGGGTATGTTTTGCCACAGAGTC ATCGTCAGTTTTCTGAAAGGAAAATTAATGATATGACATTTAGGTAGAAT AGAATTTCCTCTAGACCATTCCAACCAGTTACTTCTGAATACTGAAATAA AGATTGATGTGCTTCTATTTTAGCTCGACGCTGGCTCGTCAGATCGTATC TGCCTCAGTTCTCGAGATGAATTATCTATTCTTGTCGTGTCTTATCATGA CCTGAAAGCTTGCTTAGAAACCGCGTTTTCAGAGCTCATTCAATCTTCAG AAATGTCTTAACATTCTAacgaaacaaaatacaaaatggtGGTCCATGGG TATATTTATGATATATTTGCATTGTGAAAAAATGCGTACAACGATATAAT TTGAaggagaaaaaaggaaaactgcgtctaatttttttttgattgaacAT ACACATACAAAAAACTAGCTATGGaagaagttttttattttatttttatt tttcagtttattGTAAAAtaacaagtcttgtacttttTTGCCcttgtata tttattttttcatcccGTAACACAAAGAACTTTTTAGGGTACTTTAAAGA ACGCGAGTACTATTACCTCgtataaaaaagtgaattaatttttgttgcat tttttCATTGGACGGAGAAAACTATATAATGTGTATATTACGTTCTGTAA TTTTTATCATGGATTATTTAGTAGCATAtgtacaaaaatacaatttattA TAGTATGATATTGTATTTGTATTAAGATTTTGATCCGTAAAACTTTATCT AGcgtacatttttcaaaaagcttttcgGAATCGCACACAGCTCCACGCTA TTTTCTCGGTTTTTCAATAGCGAAATAATTCacaattaatttcaactttt ctatTACAGCCCTAAAACTGATAGATTACGGACTTTTTCTCGAATCTGTA TCTTCATATATTTTGtggaaataattaattttttgggtCTTCTTTTATAT AGATTATATTACATAgtcgatttttttgaaaaatagtgtATAATGAACCC TCGCCAAAACGAAAATTGAGATGAAACGTTTACATATTtgtaaaatgtaa tttttagtACGATCTCATTAATAAGATATtaagaaatacaaaaaataccA TAAACGGAtaatttaaaaacttaaaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036991XLOC_036991Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058719-exon-scaffold_313-1491911889:509732..510142TCONS_00058719-exon-scaffold_313-1491911889:509732..510142Clytia hemisphaericaexon
TCONS_00058719-exon-scaffold_313-1510915933:509732..510142TCONS_00058719-exon-scaffold_313-1510915933:509732..510142Clytia hemisphaericaexon
TCONS_00058719-exon-scaffold_313-1575043694:509732..510142TCONS_00058719-exon-scaffold_313-1575043694:509732..510142Clytia hemisphaericaexon
TCONS_00058719-exon-scaffold_313-1491911889:511033..511307TCONS_00058719-exon-scaffold_313-1491911889:511033..511307Clytia hemisphaericaexon
TCONS_00058719-exon-scaffold_313-1510915933:511033..511307TCONS_00058719-exon-scaffold_313-1510915933:511033..511307Clytia hemisphaericaexon
TCONS_00058719-exon-scaffold_313-1575043694:511033..511307TCONS_00058719-exon-scaffold_313-1575043694:511033..511307Clytia hemisphaericaexon
TCONS_00058719-exon-scaffold_313-1491911889:511489..511611TCONS_00058719-exon-scaffold_313-1491911889:511489..511611Clytia hemisphaericaexon
TCONS_00058719-exon-scaffold_313-1510915933:511489..511611TCONS_00058719-exon-scaffold_313-1510915933:511489..511611Clytia hemisphaericaexon
TCONS_00058719-exon-scaffold_313-1575043694:511489..511611TCONS_00058719-exon-scaffold_313-1575043694:511489..511611Clytia hemisphaericaexon
TCONS_00058719-exon-scaffold_313-1491911889:511925..511992TCONS_00058719-exon-scaffold_313-1491911889:511925..511992Clytia hemisphaericaexon
TCONS_00058719-exon-scaffold_313-1510915933:511925..511992TCONS_00058719-exon-scaffold_313-1510915933:511925..511992Clytia hemisphaericaexon
TCONS_00058719-exon-scaffold_313-1575043694:511925..511992TCONS_00058719-exon-scaffold_313-1575043694:511925..511992Clytia hemisphaericaexon
TCONS_00058719-exon-scaffold_313-1491911889:512301..512388TCONS_00058719-exon-scaffold_313-1491911889:512301..512388Clytia hemisphaericaexon
TCONS_00058719-exon-scaffold_313-1510915933:512301..512388TCONS_00058719-exon-scaffold_313-1510915933:512301..512388Clytia hemisphaericaexon
TCONS_00058719-exon-scaffold_313-1575043694:512301..512388TCONS_00058719-exon-scaffold_313-1575043694:512301..512388Clytia hemisphaericaexon
TCONS_00058719-exon-scaffold_313-1491911889:512530..512646TCONS_00058719-exon-scaffold_313-1491911889:512530..512646Clytia hemisphaericaexon
TCONS_00058719-exon-scaffold_313-1510915933:512530..512646TCONS_00058719-exon-scaffold_313-1510915933:512530..512646Clytia hemisphaericaexon
TCONS_00058719-exon-scaffold_313-1575043694:512530..512646TCONS_00058719-exon-scaffold_313-1575043694:512530..512646Clytia hemisphaericaexon
TCONS_00058719-exon-scaffold_313-1491911889:512784..513075TCONS_00058719-exon-scaffold_313-1491911889:512784..513075Clytia hemisphaericaexon
TCONS_00058719-exon-scaffold_313-1510915933:512784..513075TCONS_00058719-exon-scaffold_313-1510915933:512784..513075Clytia hemisphaericaexon
TCONS_00058719-exon-scaffold_313-1575043694:512784..513075TCONS_00058719-exon-scaffold_313-1575043694:512784..513075Clytia hemisphaericaexon
TCONS_00058719-exon-scaffold_313-1491911889:513392..513473TCONS_00058719-exon-scaffold_313-1491911889:513392..513473Clytia hemisphaericaexon
TCONS_00058719-exon-scaffold_313-1510915933:513392..513473TCONS_00058719-exon-scaffold_313-1510915933:513392..513473Clytia hemisphaericaexon
TCONS_00058719-exon-scaffold_313-1575043694:513392..513473TCONS_00058719-exon-scaffold_313-1575043694:513392..513473Clytia hemisphaericaexon
TCONS_00058719-exon-scaffold_313-1491911889:518889..519028TCONS_00058719-exon-scaffold_313-1491911889:518889..519028Clytia hemisphaericaexon
TCONS_00058719-exon-scaffold_313-1510915933:518889..519028TCONS_00058719-exon-scaffold_313-1510915933:518889..519028Clytia hemisphaericaexon
TCONS_00058719-exon-scaffold_313-1575043694:518889..519028TCONS_00058719-exon-scaffold_313-1575043694:518889..519028Clytia hemisphaericaexon
TCONS_00058719-exon-scaffold_313-1491911889:519969..520104TCONS_00058719-exon-scaffold_313-1491911889:519969..520104Clytia hemisphaericaexon
TCONS_00058719-exon-scaffold_313-1510915933:519969..520104TCONS_00058719-exon-scaffold_313-1510915933:519969..520104Clytia hemisphaericaexon
TCONS_00058719-exon-scaffold_313-1575043694:519969..520104TCONS_00058719-exon-scaffold_313-1575043694:519969..520104Clytia hemisphaericaexon
TCONS_00058719-exon-scaffold_313-1491911889:520223..520287TCONS_00058719-exon-scaffold_313-1491911889:520223..520287Clytia hemisphaericaexon
TCONS_00058719-exon-scaffold_313-1510915933:520223..520287TCONS_00058719-exon-scaffold_313-1510915933:520223..520287Clytia hemisphaericaexon
TCONS_00058719-exon-scaffold_313-1575043694:520223..520287TCONS_00058719-exon-scaffold_313-1575043694:520223..520287Clytia hemisphaericaexon
TCONS_00058719-exon-scaffold_313-1491911889:520451..520589TCONS_00058719-exon-scaffold_313-1491911889:520451..520589Clytia hemisphaericaexon
TCONS_00058719-exon-scaffold_313-1510915933:520451..520589TCONS_00058719-exon-scaffold_313-1510915933:520451..520589Clytia hemisphaericaexon
TCONS_00058719-exon-scaffold_313-1575043694:520451..520589TCONS_00058719-exon-scaffold_313-1575043694:520451..520589Clytia hemisphaericaexon
TCONS_00058719-exon-scaffold_313-1491911889:520955..521958TCONS_00058719-exon-scaffold_313-1491911889:520955..521958Clytia hemisphaericaexon
TCONS_00058719-exon-scaffold_313-1510915933:520955..521958TCONS_00058719-exon-scaffold_313-1510915933:520955..521958Clytia hemisphaericaexon
TCONS_00058719-exon-scaffold_313-1575043694:520955..521958TCONS_00058719-exon-scaffold_313-1575043694:520955..521958Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_313supercontigscaffold_313:509732..521958 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

min expression (0 tpm) - - (3.50537 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.20406 0.672823 1.66439e-08 0.116385 2.99702 2.1037 1.28854 1.0881 1.42539 1.4684 0.531665 0.993015 0.747475 0.827631 0.393889 0.214574 0 0.0990522 1.34407 0.507764 1.74673 3.50537 1.61795 1.07411 1.0891 0.478094 0.736215 0.614436 0.354619 0.96916
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00058719 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
ZOOM
x 1
POSITION
0
5001000150020002500Expect = 1.16e-141 / Id = 51.05SequencePAN3
Match NameE-valueIdentityDescription
PAN31.158e-14151.05PAN2-PAN3 deadenylation complex subunit PAN3 OS=Ho... [more]
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